Pregenerated sensors for LINC00589 (Homo sapiens)
Ensembl gene IDs: ENSG00000251191Ensembl transcript IDs: ENST00000506121.3, ENST00000518623.5, ENST00000662593.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCGGAGGAGAAAGAATTCTGATTCCAGTCCACACCACCCTAGACTaGAGCATTGAGCACCCCAGGGCTGGCGTTCATCTCAACCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: SGGERILIPVHTTLD*SIEHPRAGVHLNPL Trigger: GAGGGGGTTGAGATGAACGCCAGCCCTGGGGTGCTCAATGCTGCAGTCTAGGGTGGTGTGGACTGGAATCAGAATTCTTTCTCCTCCGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CCA 90 bp | AAGCAAGATTCAAGTCAGGGTCCCCTTGGCTTCGACTGGCTCTACTaGATCAAACAGCTCCAGCGGGGACAGAGGCAGCAGGAAAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: KQDSSQGPLGFDWLY*IKQLQRGQRQQERA Trigger: AGCTCTTTCCTGCTGCCTCTGTCCCCGCTGGAGCTGTTTGATCCAGTAGAGCCAGTCGAAGCCAAGGGGACCCTGACTTGAATCTTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CCA 90 bp | CATGTCAGAAAGCAAGATTCAAGTCAGGGTCCCCTTGGCTTCGACTaGCTCTACTGGATCAAACAGCTCCAGCGGGGACAGAGGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: HVRKQDSSQGPLGFD*LYWIKQLQRGQRQQ Trigger: CTGCTGCCTCTGTCCCCGCTGGAGCTGTTTGATCCAGTAGAGCCAGTCGAAGCCAAGGGGACCCTGACTTGAATCTTGCTTTCTGACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CCA 90 bp | CCACAGCCAGCATGTCAGAAAGCAAGATTCAAGTCAGGGTCCCCTTaGCTTCGACTGGCTCTACTGGATCAAACAGCTCCAGCGGGGACA | + |
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Preference number: 5 (lower is better) Translates to: PQPACQKARFKSGSP*LRLALLDQTAPAGT Trigger: TGTCCCCGCTGGAGCTGTTTGATCCAGTAGAGCCAGTCGAAGCCAAGGGGACCCTGACTTGAATCTTGCTTTCTGACATGCTGGCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CCA 90 bp | GCGTTCATCTCAACCCCCTCATTTTCTCAGTTGAGGAAACAACCCTaGAGAGGTGAGGTGACCCGCTTAACATCATGCCACGTGTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: AFISTPSFSQLRKQP*RGEVTRLTSCHVCG Trigger: CCCACACACGTGGCATGATGTTAAGCGGGTCACCTCACCTCTCCAGGGTTGTTTCCTCAACTGAGAAAATGAGGGGGTTGAGATGAACGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS TCA 90 bp | GGGCTGGTTGAGAATTACATTTCTGCACCCATGGTTCCGCTGTGGTaGACACCGGGAGTAAGCAAGCTCTTATTCAGGTCCCAAGCAAGC | + |
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Preference number: 5 (lower is better) Translates to: GLVENYISAPMVPLW*TPGVSKLLFRSQAS Trigger: GCTTGCTTGGGACCTGAATAAGAGCTTGCTTACTCCCGGTGTTCACCACAGCGGAACCATGGGTGCAGAAATGTAATTCTCAACCAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS GCA 90 bp | CCTTCAGGGACAGCAGGACCTGCTGAGTCCATGGAAGGGTCTCAGTaGTTATTGATTGAATGGAGGTGTCATCCTGTGCTTTCGAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: PSGTAGPAESMEGSQ*LLIEWRCHPVLSSK Trigger: TTTGCTCGAAAGCACAGGATGACACCTCCATTCAATCAATAAGCACTGAGACCCTTCCATGGACTCAGCAGGTCCTGCTGTCCCTGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS GCA 90 bp | GCGACAGCAGCCATGGTGTGTTCAGATACTCAGCATGACACCGCCTaGAAGCTCTATTGTCTTTCGCTGATTAAACTGGGCTGGTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: ATAAMVCSDTQHDTA*KLYCLSLIKLGWLR Trigger: TCTCAACCAGCCCAGTTTAATCAGCGAAAGACAATAGAGCTTGCAGGCGGTGTCATGCTGAGTATCTGAACACACCATGGCTGCTGTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS TCA 90 bp | GGAATCCTGCTCCGAGGAGAGACAGTAGCTGAAATCTTGCAATCCTaGAGCCTCTTTTTCCCCAAGAAGACTGCCGTCTACACCCTGTAT | + |
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Preference number: 5 (lower is better) Translates to: GILLRGETVAEILQS*SLFFPKKTAVYTLY Trigger: ATACAGGGTGTAGACGGCAGTCTTCTTGGGGAAAAAGAGGCTTCAGGATTGCAAGATTTCAGCTACTGTCTCTCCTCGGAGCAGGATTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS TCA 90 bp | GGACAGCAGGACCTGCTGAGTCCATGGAAGGGTCTCAGTGCTTATTaGTTGAATGGAGGTGTCATCCTGTGCTTTCGAGCAAAGCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: GQQDLLSPWKGLSAY*LNGGVILCFRAKLS Trigger: TGAAAGCTTTGCTCGAAAGCACAGGATGACACCTCCATTCAATCAATAAGCACTGAGACCCTTCCATGGACTCAGCAGGTCCTGCTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS TCA 90 bp | TTTCCTTGCACTGTTTCCTTTTGGGGTTCTCGCTGTGGTTTGAAATaGGAGTGTCAACCTTCAGGGACAGCAGGACCTGCTGAGTCCATG | + |
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Preference number: 5 (lower is better) Translates to: FPCTVSFWGSRCGLK*ECQPSGTAGPAESM Trigger: CATGGACTCAGCAGGTCCTGCTGTCCCTGAAGGTTGACACTCTCATTTCAAACCACAGCGAGAACCCCAAAAGGAAACAGTGCAAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS TCA 90 bp | GTGACCCGCTTAACATCATGCCACGTGTGTGGGAGAGAAGGGACATaGACCCTGTCCCCAATAATCCATGCTGCCTCTCAAATATCACAT | + |
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Preference number: 5 (lower is better) Translates to: VTRLTSCHVCGREGT*TLSPIIHAASQISH Trigger: ATGTGATATTTGAGAGGCAGCATGGATTATTGGGGACAGGGTTCATGTCCCTTCTCTCCCACACACGTGGCATGATGTTAAGCGGGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CCA 90 bp | GGACCTGCTGAGTCCATGGAAGGGTCTCAGTGCTTATTGATTGAATaGAGGTGTCATCCTGTGCTTTCGAGCAAAGCTTTCAGAACCAGA | + |
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Preference number: 5 (lower is better) Translates to: GPAESMEGSQCLLIE*RCHPVLSSKAFRTR Trigger: TCTGGTTCTGAAAGCTTTGCTCGAAAGCACAGGATGACACCTCCATTCAATCAATAAGCACTGAGACCCTTCCATGGACTCAGCAGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CCA 90 bp | GACACCGCCTGCAAGCTCTATTGTCTTTCGCTGATTAAACTGGGCTaGTTGAGAATTACATTTCTGCACCCATGGTTCCGCTGTGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: DTACKLYCLSLIKLG*LRITFLHPWFRCGE Trigger: TTCACCACAGCGGAACCATGGGTGCAGAAATGTAATTCTCAACCAGCCCAGTTTAATCAGCGAAAGACAATAGAGCTTGCAGGCGGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CCA 90 bp | TTCCATTATACTATGAGGATCACTCATTCTGTGACAGCTGAAATTTaGGCAGAGAGTTCAGCAGGCTGTACAGAAAGCATGGCTAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: FHYTMRITHSVTAEI*AESSAGCTESMARE Trigger: CTCCCTAGCCATGCTTTCTGTACAGCCTGCTGAACTCTCTGCCCAAATTTCAGCTGTCACAGAATGAGTGATCCTCATAGTATAATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506121.3 |
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| CDS TCA 90 bp | TCTACTGGCTCTCATTTTGTATGGACATTCAGGCCATGGGGAAACTaGGATGATGCATTTCCATTATACTATGAGGATCACTCATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: STGSHFVWTFRPWGN*DDAFPLYYEDHSFC Trigger: ACAGAATGAGTGATCCTCATAGTATAATGGAAATGCATCATCTCAGTTTCCCCATGGCCTGAATGTCCATACAAAATGAGAGCCAGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000506121.3 ENST00000518623.5 ENST00000662593.1 |
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| CDS CCA 90 bp | ATTTCTCTGTCCCACCCATTCCTGGGCAGACAAATATCAAAGAACTaGAATTTGCGAATCCATCAATGCTTCATTTGTTTCCCATCTGTT | + |
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Preference number: 5 (lower is better) Translates to: ISLSHPFLGRQISKN*NLRIHQCFICFPSV Trigger: AACAGATGGGAAACAAATGAAGCATTGATGGATTCGCAAATTCCAGTTCTTTGATATTTGTCTGCCCAGGAATGGGTGGGACAGAGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518623.5 |
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| CDS TCA 90 bp | GGAGCTATTAGACTTTTTAAAATGTGCGCCTCTCAACACCAGGCATaGGTGACAGCATCAGATAAAGCAATTGTAACTTTCTTCTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: GAIRLFKMCASQHQA*VTASDKAIVTFFFH Trigger: ATGAAAGAAGAAAGTTACAATTGCTTTATCTGATGCTGTCACTCATGCCTGGTGTTGAGAGGCGCACATTTTAAAAAGTCTAATAGCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518623.5 |
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| CDS CCA 72 bp | TCAAGTCAGGGTCCCCTTGGCTTCGACTGGCTCTACTaGATCAAACAGCTCCAGCGGGGACAGAGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSQGPLGFDWLY*IKQLQRGQRQQ Trigger: CTGCTGCCTCTGTCCCCGCTGGAGCTGTTTGATCCAGTAGAGCCAGTCGAAGCCAAGGGGACCCTGACTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CAA 90 bp | GCCACAGCCAGCATGTCAGAAAGCAAGATTCAAGTCAGGGTCCCCTaGGCTTCGACTGGCTCTACTGGATCAAACAGCTCCAGCGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: ATASMSESKIQVRVP*ASTGSTGSNSSSGD Trigger: GTCCCCGCTGGAGCTGTTTGATCCAGTAGAGCCAGTCGAAGCCAAGGGGACCCTGACTTGAATCTTGCTTTCTGACATGCTGGCTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS GCA 72 bp | TGGGCCTCAGTTTCCTTTTCCCAGCGAGAAGAGCAGTaGACAGTGACATGTGTCAAGGGCCCCAGCCATGGA | + |
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Preference number: 6 (lower is better) Translates to: WASVSFSQREEQ*TVTCVKGPSHG Trigger: TCCATGGCTGGGGCCCTTGACACATGTCACTGTGCACTGCTCTTCTCGCTGGGAAAAGGAAACTGAGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CCA 72 bp | AAGCAAGATTCAAGTCAGGGTCCCCTTGGCTTCGACTaGCTCTACTGGATCAAACAGCTCCAGCGGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: KQDSSQGPLGFD*LYWIKQLQRGQ Trigger: CTGTCCCCGCTGGAGCTGTTTGATCCAGTAGAGCCAGTCGAAGCCAAGGGGACCCTGACTTGAATCTTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS GCA 72 bp | GAAAGAATTCTGATTCCAGTCCACACCACCCTAGACTaGAGCATTGAGCACCCCAGGGCTGGCGTTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: ERILIPVHTTLD*SIEHPRAGVHL Trigger: GAGATGAACGCCAGCCCTGGGGTGCTCAATGCTGCAGTCTAGGGTGGTGTGGACTGGAATCAGAATTCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS TCA 72 bp | GGCGACAGCAGCCATGGTGTGTTCAGATACTCAGCATaGCACCGCCTGCAAGCTCTATTGTCTTTCGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: GDSSHGVFRYSA*HRLQALLSFAD Trigger: ATCAGCGAAAGACAATAGAGCTTGCAGGCGGTGTCATGCTGAGTATCTGAACACACCATGGCTGCTGTCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CAA 90 bp | GGGACAGCAGGACCTGCTGAGTCCATGGAAGGGTCTCAGTGCTTATaGATTGAATGGAGGTGTCATCCTGTGCTTTCGAGCAAAGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GTAGPAESMEGSQCL*IEWRCHPVLSSKAF Trigger: GAAAGCTTTGCTCGAAAGCACAGGATGACACCTCCATTCAATCAATAAGCACTGAGACCCTTCCATGGACTCAGCAGGTCCTGCTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS TCA 72 bp | CTCATTTTCTCAGTTGAGGAAACAACCCTGGAGAGGTaGGGTGACCCGCTTAACATCATGCCACGTGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LIFSVEETTLER*GDPLNIMPRVW Trigger: CCACACACGTGGCATGATGTTAAGCGGGTCACCTCACCTCTCCAGGGTTGTTTCCTCAACTGAGAAAATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CCA 72 bp | TTTGGGCAGAGAGTTCAGCAGGCTGTACAGAAAGCATaGCTAGGGAGTCCTCAGGAAATGTACAGTCACGGT | + |
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Preference number: 6 (lower is better) Translates to: FGQRVQQAVQKA*LGSPQEMYSHG Trigger: ACCGTGACTGTACATTTCCTGAGGACTCCCTAGCCATGCTTTCTGTACAGCCTGCTGAACTCTCTGCCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506121.3 |
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| CDS CCA 72 bp | TCAACCCCCTCATTTTCTCAGTTGAGGAAACAACCCTaGAGAGGTGAGGTGACCCGCTTAACATCATGCCAC | + |
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Preference number: 6 (lower is better) Translates to: STPSFSQLRKQP*RGEVTRLTSCH Trigger: GTGGCATGATGTTAAGCGGGTCACCTCACCTCTCCAGGGTTGTTTCCTCAACTGAGAAAATGAGGGGGTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CCA 72 bp | GCATGTCAGAAAGCAAGATTCAAGTCAGGGTCCCCTTaGCTTCGACTGGCTCTACTGGATCAAACAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: ACQKARFKSGSP*LRLALLDQTAP Trigger: TGGAGCTGTTTGATCCAGTAGAGCCAGTCGAAGCCAAGGGGACCCTGACTTGAATCTTGCTTTCTGACATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CAA 72 bp | GGACCTGCTGAGTCCATGGAAGGGTCTCAGTGCTTATaGATTGAATGGAGGTGTCATCCTGTGCTTTCGAGC | + |
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Preference number: 6 (lower is better) Translates to: GPAESMEGSQCL*IEWRCHPVLSS Trigger: GCTCGAAAGCACAGGATGACACCTCCATTCAATCAATAAGCACTGAGACCCTTCCATGGACTCAGCAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CAA 72 bp | AGCATGTCAGAAAGCAAGATTCAAGTCAGGGTCCCCTaGGCTTCGACTGGCTCTACTGGATCAAACAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SMSESKIQVRVP*ASTGSTGSNSS Trigger: GGAGCTGTTTGATCCAGTAGAGCCAGTCGAAGCCAAGGGGACCCTGACTTGAATCTTGCTTTCTGACATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS TCA 72 bp | GACCTGCTGAGTCCATGGAAGGGTCTCAGTGCTTATTaGTTGAATGGAGGTGTCATCCTGTGCTTTCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: DLLSPWKGLSAY*LNGGVILCFRA Trigger: TGCTCGAAAGCACAGGATGACACCTCCATTCAATCAATAAGCACTGAGACCCTTCCATGGACTCAGCAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS TCA 72 bp | ACTGTTTCCTTTTGGGGTTCTCGCTGTGGTTTGAAATaGGAGTGTCAACCTTCAGGGACAGCAGGACCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TVSFWGSRCGLK*ECQPSGTAGPA Trigger: AGCAGGTCCTGCTGTCCCTGAAGGTTGACACTCTCATTTCAAACCACAGCGAGAACCCCAAAAGGAAACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS TCA 72 bp | CTTGCACTGTTTCCTTTTGGGGTTCTCGCTGTGGTTTaGAATGAGAGTGTCAACCTTCAGGGACAGCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LALFPFGVLAVV*NESVNLQGQQD Trigger: GTCCTGCTGTCCCTGAAGGTTGACACTCTCATTTCAAACCACAGCGAGAACCCCAAAAGGAAACAGTGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS TCA 72 bp | GAGAATTACATTTCTGCACCCATGGTTCCGCTGTGGTaGACACCGGGAGTAAGCAAGCTCTTATTCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: ENYISAPMVPLW*TPGVSKLLFRS Trigger: GGACCTGAATAAGAGCTTGCTTACTCCCGGTGTTCACCACAGCGGAACCATGGGTGCAGAAATGTAATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS GCA 72 bp | GCCATGGTGTGTTCAGATACTCAGCATGACACCGCCTaGAAGCTCTATTGTCTTTCGCTGATTAAACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: AMVCSDTQHDTA*KLYCLSLIKLG Trigger: GCCCAGTTTAATCAGCGAAAGACAATAGAGCTTGCAGGCGGTGTCATGCTGAGTATCTGAACACACCATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CAA 90 bp | ACCGCCTGCAAGCTCTATTGTCTTTCGCTGATTAAACTGGGCTGGTaGAGAATTACATTTCTGCACCCATGGTTCCGCTGTGGTGAACAC | + |
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Preference number: 6 (lower is better) Translates to: TACKLYCLSLIKLGW*RITFLHPWFRCGEH Trigger: GTGTTCACCACAGCGGAACCATGGGTGCAGAAATGTAATTCTCAACCAGCCCAGTTTAATCAGCGAAAGACAATAGAGCTTGCAGGCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CCA 72 bp | GAGTCCATGGAAGGGTCTCAGTGCTTATTGATTGAATaGAGGTGTCATCCTGTGCTTTCGAGCAAAGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ESMEGSQCLLIE*RCHPVLSSKAF Trigger: GAAAGCTTTGCTCGAAAGCACAGGATGACACCTCCATTCAATCAATAAGCACTGAGACCCTTCCATGGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CAA 72 bp | CCTCACGTCCTCTGTTTTTCTCTACTGGCTCTCATTTaGTATGGACATTCAGGCCATGGGGAAACTGAGATG | + |
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Preference number: 6 (lower is better) Translates to: PHVLCFSLLALI*YGHSGHGETEM Trigger: CATCTCAGTTTCCCCATGGCCTGAATGTCCATACAAAATGAGAGCCAGTAGAGAAAAACAGAGGACGTGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000506121.3 ENST00000518623.5 ENST00000662593.1 |
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| CDS CCA 72 bp | ACTATGAGGATCACTCATTCTGTGACAGCTGAAATTTaGGCAGAGAGTTCAGCAGGCTGTACAGAAAGCATG | + |
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Preference number: 6 (lower is better) Translates to: TMRITHSVTAEI*AESSAGCTESM Trigger: CATGCTTTCTGTACAGCCTGCTGAACTCTCTGCCCAAATTTCAGCTGTCACAGAATGAGTGATCCTCATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506121.3 |
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| CDS CCA 72 bp | TGCAAGCTCTATTGTCTTTCGCTGATTAAACTGGGCTaGTTGAGAATTACATTTCTGCACCCATGGTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: CKLYCLSLIKLG*LRITFLHPWFR Trigger: GCGGAACCATGGGTGCAGAAATGTAATTCTCAACCAGCCCAGTTTAATCAGCGAAAGACAATAGAGCTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CAA 90 bp | CCCACATCCTTCCTTCAGTCCATATCCAAAGAAGAACGGGAAAAATaGCAAGCCTTTCCCCACCCGTATCCTCATTATTCCCTTACATTT | + |
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Preference number: 6 (lower is better) Translates to: PTSFLQSISKEEREK*QAFPHPYPHYSLTF Trigger: AAATGTAAGGGAATAATGAGGATACGGGTGGGGAAAGGCTTGCAATTTTTCCCGTTCTTCTTTGGATATGGACTGAAGGAAGGATGTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518623.5 |
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| CDS TCA 72 bp | CTTTCATGCTGCATCTGTCCCACTACTGGATACAGTTaGTTTACCGTACTAGGAAACACAGCACAGGGATTT | + |
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Preference number: 6 (lower is better) Translates to: LSCCICPTTGYS*FTVLGNTAQGF Trigger: AAATCCCTGTGCTGTGTTTCCTAGTACGGTAAATCAACTGTATCCAGTAGTGGGACAGATGCAGCATGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518623.5 |
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| CDS GCA 72 bp | GAGAGAAGGGACATGAACCCTGTCCCCAATAATCCATaGTGCCTCTCAAATATCACATTATTTTCCTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: ERRDMNPVPNNP*CLSNITLFSLH Trigger: GTGCAAGGAAAATAATGTGATATTTGAGAGGCAGCATGGATTATTGGGGACAGGGTTCATGTCCCTTCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CAA 72 bp | AAGCTCTATTGTCTTTCGCTGATTAAACTGGGCTGGTaGAGAATTACATTTCTGCACCCATGGTTCCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: KLYCLSLIKLGW*RITFLHPWFRC Trigger: ACAGCGGAACCATGGGTGCAGAAATGTAATTCTCAACCAGCCCAGTTTAATCAGCGAAAGACAATAGAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS CAA 72 bp | TCTTTCATGCTGCATCTGTCCCACTACTGGATACAGTaGATTTACCGTACTAGGAAACACAGCACAGGGATT | + |
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Preference number: 6 (lower is better) Translates to: SFMLHLSHYWIQ*IYRTRKHSTGI Trigger: AATCCCTGTGCTGTGTTTCCTAGTACGGTAAATCAACTGTATCCAGTAGTGGGACAGATGCAGCATGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518623.5 |
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| CDS CAA 72 bp | TTCCTTCAGTCCATATCCAAAGAAGAACGGGAAAAATaGCAAGCCTTTCCCCACCCGTATCCTCATTATTCC | + |
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Preference number: 6 (lower is better) Translates to: FLQSISKEEREK*QAFPHPYPHYS Trigger: GGAATAATGAGGATACGGGTGGGGAAAGGCTTGCAATTTTTCCCGTTCTTCTTTGGATATGGACTGAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518623.5 |
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| CDS GCA 72 bp | AGAAGGGACATGAACCCTGTCCCCAATAATCCATGCTaGCTCTCAAATATCACATTATTTTCCTTGCACTGT | + |
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Preference number: 6 (lower is better) Translates to: RRDMNPVPNNPC*LSNITLFSLHC Trigger: ACAGTGCAAGGAAAATAATGTGATATTTGAGAGGCAGCATGGATTATTGGGGACAGGGTTCATGTCCCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506121.3 ENST00000662593.1 |
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| CDS TCA 72 bp | TCTCATTTTGTATGGACATTCAGGCCATGGGGAAACTaGGATGATGCATTTCCATTATACTATGAGGATCAC | + |
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Preference number: 6 (lower is better) Translates to: SHFVWTFRPWGN*DDAFPLYYEDH Trigger: GTGATCCTCATAGTATAATGGAAATGCATCATCTCAGTTTCCCCATGGCCTGAATGTCCATACAAAATGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000506121.3 ENST00000518623.5 ENST00000662593.1 |
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| CDS CAA 72 bp | CCATTCCTGGGCAGACAAATATCAAAGAACTGGAATTaGCGAATCCATCAATGCTTCATTTGTTTCCCATCT | + |
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Preference number: 6 (lower is better) Translates to: PFLGRQISKNWN*RIHQCFICFPS Trigger: AGATGGGAAACAAATGAAGCATTGATGGATTCGCAAATTCCAGTTCTTTGATATTTGTCTGCCCAGGAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518623.5 |
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| CDS CAA 90 bp | ACAAATATCAAAGAACTGGAATTTGCGAATCCATCAATGCTTCATTaGTTTCCCATCTGTTTCCTAGATATGTCGGAGCTATTAGACTTT | + |
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Preference number: 6 (lower is better) Translates to: TNIKELEFANPSMLH*FPICFLDMSELLDF Trigger: AAAGTCTAATAGCTCCGACATATCTAGGAAACAGATGGGAAACAAATGAAGCATTGATGGATTCGCAAATTCCAGTTCTTTGATATTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518623.5 |
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