Pregenerated sensors for LINC00574 (Homo sapiens)
Ensembl gene IDs: ENSG00000231690Ensembl transcript IDs: ENST00000420557.3, ENST00000625483.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCGCTGAGGACGACAACCGTGCACGGCTGCCCGGCGGGTCCGCACTaGCTGCCGCTCCAGTGTCCTGCCCGCTCCGCAGCAACCCCGAGC | + |
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Preference number: 5 (lower is better) Translates to: PLRTTTVHGCPAGPH*LPLQCPARSAATPS Trigger: GCTCGGGGTTGCTGCGGAGCGGGCAGGACACTGGAGCGGCAGGCAGTGCGGACCCGCCGGGCAGCCGTGCACGGTTGTCGTCCTCAGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 90 bp | TCACGGCTCCCCCTGGCCGCTGCTTTACCAGGGAGCGCCACCCCGTaGCCCGCCAGAGGAAGTGCAGGCGCCAGCACAGCACGGGCCGAA | + |
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Preference number: 5 (lower is better) Translates to: SRLPLAAALPGSATP*PARGSAGASTARAE Trigger: TTCGGCCCGTGCTGTGCTGGCGCCTGCACTTCCTCTGGCGGGGCACGGGGTGGCGCTCCCTGGTAAAGCAGCGGCCAGGGGGAGCCGTGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420557.3 |
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| CDS GCA 90 bp | GCAACAAACTGGCTCCTGCCGCTGAGGACGACAACCGTGCACGGCTaGCCGGCGGGTCCGCACTGCCTGCCGCTCCAGTGTCCTGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: ATNWLLPLRTTTVHG*PAGPHCLPLQCPAR Trigger: GCGGGCAGGACACTGGAGCGGCAGGCAGTGCGGACCCGCCGGGCAGCCGTGCACGGTTGTCGTCCTCAGCGGCAGGAGCCAGTTTGTTGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 90 bp | CGCTGCTTTACCAGGGAGCGCCACCCCGTGCCCCGCCAGAGGAAGTaGAGGCGCCAGCACAGCACGGGCCGAAAGCCACACTGTGGGACC | + |
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Preference number: 5 (lower is better) Translates to: RCFTRERHPVPRQRK*RRQHSTGRKPHCGT Trigger: GGTCCCACAGTGTGGCTTTCGGCCCGTGCTGTGCTGGCGCCTGCACTTCCTCTGGCGGGGCACGGGGTGGCGCTCCCTGGTAAAGCAGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420557.3 |
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| CDS CCA 90 bp | CTGCCCAGTACTCTCCTGGATGGATGGTCCCCCTCACGGTGGCCTTaGAACCCGCTTCAGCGGGAGAGGCAGCGCCTCACTCACGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LPSTLLDGWSPSRWP*NPLQRERQRLTHGS Trigger: GGAGCCGTGAGTGAGGCGCTGCCTCTCCCGCTGAAGCGGGTTCCAAGGCCACCGTGAGGGGGACCATCCATCCAGGAGAGTACTGGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 90 bp | CCTGCCGCTCCAGTGTCCTGCCCGCTCCGCAGCAACCCCGAGCTCTaGCTCCTGTCCACCCGTGTGTCTGTGCACACAGCATGTTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: PAAPVSCPLRSNPEL*LLSTRVSVHTACCC Trigger: ACAGCAACATGCTGTGTGCACAGACACACGGGTGGACAGGAGGCAGAGCTCGGGGTTGCTGCGGAGCGGGCAGGACACTGGAGCGGCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 90 bp | CGCAGCCGCAGGTCTGTGGGGGCTGGTGTCTGGCCTCCCTCCTTCTaGCTGGCTGAGCAAAATATCTGCAGGGCGCAGAGCAGGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: RSRRSVGAGVWPPSF*LAEQNICRAQSRSQ Trigger: CTGTGACCTGCTCTGCGCCCTGCAGATATTTTGCTCAGCCAGCCAGAAGGAGGGAGGCCAGACACCAGCCCCCACAGACCTGCGGCTGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 90 bp | CCAAGGGCTCTTATGAAATGGACAGAGTGCGGGGTGGGCACCAGCTaGGCTGCGTCCCTGGCCAGAGCTGTCGGCCAAGTTGGAGGACAG | + |
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Preference number: 5 (lower is better) Translates to: PRALMKWTECGVGTS*AASLARAVGQVGGQ Trigger: CTGTCCTCCAACTTGGCCGACAGCTCTGGCCAGGGACGCAGCCCAGCTGGTGCCCACCCCGCACTCTGTCCATTTCATAAGAGCCCTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 90 bp | GCCGCAGGTCTGTGGGGGCTGGTGTCTGGCCTCCCTCCTTCTGGCTaGCTGAGCAAAATATCTGCAGGGCGCAGAGCAGGTCACAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: AAGLWGLVSGLPPSG*LSKISAGRRAGHRD Trigger: ATCCCTGTGACCTGCTCTGCGCCCTGCAGATATTTTGCTCAGCCAGCCAGAAGGAGGGAGGCCAGACACCAGCCCCCACAGACCTGCGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS TCA 90 bp | TTTGTAAAAAGACAAGGCCCTGAGCAACAAACTGGCTCCTGCCGCTaGGGACGACAACCGTGCACGGCTGCCCGGCGGGTCCGCACTGCC | + |
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Preference number: 5 (lower is better) Translates to: FVKRQGPEQQTGSCR*GRQPCTAARRVRTA Trigger: GGCAGTGCGGACCCGCCGGGCAGCCGTGCACGGTTGTCGTCCTCAGCGGCAGGAGCCAGTTTGTTGCTCAGGGCCTTGTCTTTTTACAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 90 bp | GGCTCTTATGAAATGGACAGAGTGCGGGGTGGGCACCAGCTGGGCTaGGTCCCTGGCCAGAGCTGTCGGCCAAGTTGGAGGACAGAACAG | + |
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Preference number: 5 (lower is better) Translates to: GSYEMDRVRGGHQLG*VPGQSCRPSWRTEQ Trigger: CTGTTCTGTCCTCCAACTTGGCCGACAGCTCTGGCCAGGGACGCAGCCCAGCTGGTGCCCACCCCGCACTCTGTCCATTTCATAAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 90 bp | TCCGCAGCAACCCCGAGCTCTGCCTCCTGTCCACCCGTGTGTCTGTaGACACAGCATGTTGCTGTCAGGGAACGGCCTCCTGCTTCTCGA | + |
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Preference number: 5 (lower is better) Translates to: SAATPSSASCPPVCL*TQHVAVRERPPASR Trigger: TCGAGAAGCAGGAGGCCGTTCCCTGACAGCAACATGCTGTGTGCACAGACACACGGGTGGACAGGAGGCAGAGCTCGGGGTTGCTGCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 90 bp | AGATGGCCTGGAGCCAGGAGGTGCCGCCCACCAGTAGGGCTAGGCTaGGAGAGCTACTTTTTCCCCACCAGAGCCGCCTCTGCTTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: RWPGARRCRPPVGLG*ESYFFPTRAASAFS Trigger: ACTGAAAGCAGAGGCGGCTCTGGTGGGGAAAAAGTAGCTCTCCCAGCCTAGCCCTACTGGTGGGCGGCACCTCCTGGCTCCAGGCCATCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS TCA 90 bp | CATCGGCAGAGGAGTGAGATTTTGCCACAGTCTGGCCCTGGCAGTTaGGGAGCAGCTGGTGGGAGGCGGGAGATGTGCAGGCTGAGCACA | + |
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Preference number: 5 (lower is better) Translates to: HRQRSEILPQSGPGS*GAAGGRREMCRLST Trigger: TGTGCTCAGCCTGCACATCTCCCGCCTCCCACCAGCTGCTCCTCAACTGCCAGGGCCAGACTGTGGCAAAATCTCACTCCTCTGCCGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS TCA 90 bp | CACCACCTCCCAGACACGAGGGAAACCCCAGCATCGGCAGAGGAGTaGGATTTTGCCACAGTCTGGCCCTGGCAGTTGAGGAGCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: HHLPDTRETPASAEE*DFATVWPWQLRSSW Trigger: CCAGCTGCTCCTCAACTGCCAGGGCCAGACTGTGGCAAAATCTCACTCCTCTGCCGATGCTGGGGTTTCCCTCGTGTCTGGGAGGTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS TCA 90 bp | CAGGTCTGTGGGGGCTGGTGTCTGGCCTCCCTCCTTCTGGCTGGCTaGGCAAAATATCTGCAGGGCGCAGAGCAGGTCACAGGGATGCTA | + |
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Preference number: 5 (lower is better) Translates to: QVCGGWCLASLLLAG*AKYLQGAEQVTGML Trigger: TAGCATCCCTGTGACCTGCTCTGCGCCCTGCAGATATTTTGCTCAGCCAGCCAGAAGGAGGGAGGCCAGACACCAGCCCCCACAGACCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 90 bp | CTGAGGGAAGTGAGGAAACCAAGGGCTCTTATGAAATGGACAGAGTaGGGGGTGGGCACCAGCTGGGCTGCGTCCCTGGCCAGAGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: LREVRKPRALMKWTE*GVGTSWAASLARAV Trigger: GACAGCTCTGGCCAGGGACGCAGCCCAGCTGGTGCCCACCCCGCACTCTGTCCATTTCATAAGAGCCCTTGGTTTCCTCACTTCCCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 90 bp | CTGGCTTTTCCACGTGAAGACAGCAAAGCGAGAGGGTCGGTAGCCTaGTCTGCTCTCCGCCCGCGTGCAGACATGGCAGCAAAGAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: LAFPREDSKARGSVA*SALRPRADMAAKRH Trigger: GTGCCTCTTTGCTGCCATGTCTGCACGCGGGCGGAGAGCAGACCAGGCTACCGACCCTCTCGCTTTGCTGTCTTCACGTGGAAAAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 90 bp | CGTCCCTGGCCAGAGCTGTCGGCCAAGTTGGAGGACAGAACAGGGTaGTGGGAGGGAAACATGGATTCACTGCAGTGCTCAGGCCACCAA | + |
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Preference number: 5 (lower is better) Translates to: RPWPELSAKLEDRTG*WEGNMDSLQCSGHQ Trigger: TTGGTGGCCTGAGCACTGCAGTGAATCCATGTTTCCCTCCCAGCACCCTGTTCTGTCCTCCAACTTGGCCGACAGCTCTGGCCAGGGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 90 bp | GAGGAAGTGCAGGCGCCAGCACAGCACGGGCCGAAAGCCACACTGTaGGACCCGCAGCGCAGCTCCAAGAAATCCAAAGTCCATTCACAA | + |
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Preference number: 5 (lower is better) Translates to: EEVQAPAQHGPKATL*DPQRSSKKSKVHSQ Trigger: TTGTGAATGGACTTTGGATTTCTTGGAGCTGCGCTGCGGGTCCCACAGTGTGGCTTTCGGCCCGTGCTGTGCTGGCGCCTGCACTTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420557.3 |
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| CDS CCA 90 bp | GAGCTGATGGAATTAACCATCTTCCCGGGAGCAAGACTGAGCCCATaGAGGGTGCTGTGGAGCTTGCTGCAGGTTCTGCTGGATAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: ELMELTIFPGARLSP*RVLWSLLQVLLDRK Trigger: TTTCCTATCCAGCAGAACCTGCAGCAAGCTCCACAGCACCCTCCATGGGCTCAGTCTTGCTCCCGGGAAGATGGTTAATTCCATCAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS TCA 90 bp | CATGCATGTGAGGTGCGGCCCTGCCCTCCAGGACACGCAGCTTCATaGGTAGAGAAGAAATCTTATCCAAGGGCGAGTAGCAAGAACACA | + |
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Preference number: 5 (lower is better) Translates to: HACEVRPCPPGHAAS*VEKKSYPRASSKNT Trigger: TGTGTTCTTGCTACTCGCCCTTGGATAAGATTTCTTCTCTACTCATGAAGCTGCGTGTCCTGGAGGGCAGGGCCGCACCTCACATGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 90 bp | CGTGTGTCTGTGCACACAGCATGTTGCTGTCAGGGAACGGCCTCCTaGTTCTCGAGTGCCATGGGACTGGCTTTTGTTTGTGTTTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: RVSVHTACCCQGTAS*FSSAMGLAFVCVFL Trigger: AAGAAAAACACAAACAAAAGCCAGTCCCATGGCACTCGAGAAGCAGGAGGCCGTTCCCTGACAGCAACATGCTGTGTGCACAGACACACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 72 bp | CCCGGCGGGTCCGCACTGCCTGCCGCTCCAGTGTCCTaGCCGCTCCGCAGCAACCCCGAGCTCTGCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PGGSALPAAPVS*PLRSNPELCLL Trigger: CAGGAGGCAGAGCTCGGGGTTGCTGCGGAGCGGGCAGGACACTGGAGCGGCAGGCAGTGCGGACCCGCCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 72 bp | CAACCGTGCACGGCTGCCCGGCGGGTCCGCACTGCCTaGCGCTCCAGTGTCCTGCCCGCTCCGCAGCAACCC | + |
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Preference number: 6 (lower is better) Translates to: QPCTAARRVRTA*RSSVLPAPQQP Trigger: GGGTTGCTGCGGAGCGGGCAGGACACTGGAGCGGCAGGCAGTGCGGACCCGCCGGGCAGCCGTGCACGGTTG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 72 bp | ACGACAACCGTGCACGGCTGCCCGGCGGGTCCGCACTaGCTGCCGCTCCAGTGTCCTGCCCGCTCCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TTTVHGCPAGPH*LPLQCPARSAA Trigger: TGCTGCGGAGCGGGCAGGACACTGGAGCGGCAGGCAGTGCGGACCCGCCGGGCAGCCGTGCACGGTTGTCGT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 72 bp | CAGCGGGAGAGGCAGCGCCTCACTCACGGCTCCCCCTaGCCGCTGCTTTACCAGGGAGCGCCACCCCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: QRERQRLTHGSP*PLLYQGAPPRA Trigger: GGCACGGGGTGGCGCTCCCTGGTAAAGCAGCGGCCAGGGGGAGCCGTGAGTGAGGCGCTGCCTCTCCCGCTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420557.3 |
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| CDS GCA 72 bp | CCCCTGGCCGCTGCTTTACCAGGGAGCGCCACCCCGTaGCCCGCCAGAGGAAGTGCAGGCGCCAGCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: PLAAALPGSATP*PARGSAGASTA Trigger: TGCTGTGCTGGCGCCTGCACTTCCTCTGGCGGGGCACGGGGTGGCGCTCCCTGGTAAAGCAGCGGCCAGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420557.3 |
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| CDS GCA 72 bp | TGGCTCCTGCCGCTGAGGACGACAACCGTGCACGGCTaGCCGGCGGGTCCGCACTGCCTGCCGCTCCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: WLLPLRTTTVHG*PAGPHCLPLQC Trigger: ACACTGGAGCGGCAGGCAGTGCGGACCCGCCGGGCAGCCGTGCACGGTTGTCGTCCTCAGCGGCAGGAGCCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CAA 90 bp | CCTGCCCAGTACTCTCCTGGATGGATGGTCCCCCTCACGGTGGCCTaGGAACCCGCTTCAGCGGGAGAGGCAGCGCCTCACTCACGGCTC | + |
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Preference number: 6 (lower is better) Translates to: PAQYSPGWMVPLTVA*EPASAGEAAPHSRL Trigger: GAGCCGTGAGTGAGGCGCTGCCTCTCCCGCTGAAGCGGGTTCCAAGGCCACCGTGAGGGGGACCATCCATCCAGGAGAGTACTGGGCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 72 bp | CCAGTGTCCTGCCCGCTCCGCAGCAACCCCGAGCTCTaGCTCCTGTCCACCCGTGTGTCTGTGCACACAGCA | + |
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Preference number: 6 (lower is better) Translates to: PVSCPLRSNPEL*LLSTRVSVHTA Trigger: TGCTGTGTGCACAGACACACGGGTGGACAGGAGGCAGAGCTCGGGGTTGCTGCGGAGCGGGCAGGACACTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 72 bp | CCCAGTACTCTCCTGGATGGATGGTCCCCCTCACGGTaGCCTTGGAACCCGCTTCAGCGGGAGAGGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: PSTLLDGWSPSR*PWNPLQRERQR Trigger: GCGCTGCCTCTCCCGCTGAAGCGGGTTCCAAGGCCACCGTGAGGGGGACCATCCATCCAGGAGAGTACTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 72 bp | ACTCTCCTGGATGGATGGTCCCCCTCACGGTGGCCTTaGAACCCGCTTCAGCGGGAGAGGCAGCGCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: TLLDGWSPSRWP*NPLQRERQRLT Trigger: AGTGAGGCGCTGCCTCTCCCGCTGAAGCGGGTTCCAAGGCCACCGTGAGGGGGACCATCCATCCAGGAGAGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 72 bp | GGAGCCAGGAGGTGCCGCCCACCAGTAGGGCTAGGCTaGGAGAGCTACTTTTTCCCCACCAGAGCCGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GARRCRPPVGLG*ESYFFPTRAAS Trigger: AGAGGCGGCTCTGGTGGGGAAAAAGTAGCTCTCCCAGCCTAGCCCTACTGGTGGGCGGCACCTCCTGGCTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CAA 72 bp | TACTCTCCTGGATGGATGGTCCCCCTCACGGTGGCCTaGGAACCCGCTTCAGCGGGAGAGGCAGCGCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: YSPGWMVPLTVA*EPASAGEAAPH Trigger: GTGAGGCGCTGCCTCTCCCGCTGAAGCGGGTTCCAAGGCCACCGTGAGGGGGACCATCCATCCAGGAGAGTA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 72 bp | CAGGCGCCAGCACAGCACGGGCCGAAAGCCACACTGTaGGACCCGCAGCGCAGCTCCAAGAAATCCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: QAPAQHGPKATL*DPQRSSKKSKV Trigger: GACTTTGGATTTCTTGGAGCTGCGCTGCGGGTCCCACAGTGTGGCTTTCGGCCCGTGCTGTGCTGGCGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420557.3 |
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| CDS CCA 72 bp | CTGGGCTGCGTCCCTGGCCAGAGCTGTCGGCCAAGTTaGAGGACAGAACAGGGTGCTGGGAGGGAAACATGG | + |
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Preference number: 6 (lower is better) Translates to: LGCVPGQSCRPS*RTEQGAGRETW Trigger: CCATGTTTCCCTCCCAGCACCCTGTTCTGTCCTCCAACTTGGCCGACAGCTCTGGCCAGGGACGCAGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 72 bp | AGCCGCCTCTGCTTTCAGTCCCAGGCTGCACCCCGCTaGCCTTTCTGGGCCACACCAGGACCATTCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SRLCFQSQAAPR*PFWATPGPFSW Trigger: CCAAGAGAATGGTCCTGGTGTGGCCCAGAAAGGCCAGCGGGGTGCAGCCTGGGACTGAAAGCAGAGGCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 72 bp | CCACGTGAAGACAGCAAAGCGAGAGGGTCGGTAGCCTaGTCTGCTCTCCGCCCGCGTGCAGACATGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PREDSKARGSVA*SALRPRADMAA Trigger: TGCTGCCATGTCTGCACGCGGGCGGAGAGCAGACCAGGCTACCGACCCTCTCGCTTTGCTGTCTTCACGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CAA 90 bp | TGGCTTCTGGAGGGAGAGGAGGAGCCTGTCCCAGGCCCAGCCATGTaGGTGACAGCAAACTACCGAACTACTGGAGGGAGAGGCCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: WLLEGEEEPVPGPAM*VTANYRTTGGRGPG Trigger: GCCCGGGCCTCTCCCTCCAGTAGTTCGGTAGTTTGCTGTCACCAACATGGCTGGGCCTGGGACAGGCTCCTCCTCTCCCTCCAGAAGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS TCA 72 bp | GGTCCTCCGGAGCCTGGGTGGAGCAGAGTAGGGTCGTaGCCTGTGGGGACCCTGCAGTGCCCAGATTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: GPPEPGWSRVGS*PVGTLQCPDLE Trigger: TTCTAAATCTGGGCACTGCAGGGTCCCCACAGGTCACGACCCTACTCTGCTCCACCCAGGCTCCGGAGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS TCA 72 bp | GTCTCGCGATGGGAGAGGCGGCCTAGTCTGAGAAACTaGGGCAGGAGGGACTGCCTGGCTTCTGGAGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: VSRWERRPSLRN*GRRDCLASGGR Trigger: TCTCCCTCCAGAAGCCAGGCAGTCCCTCCTGCCTCAGTTTCTCAGACTAGGCCGCCTCTCCCATCGCGAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 72 bp | CGTACGAAAACGCAACCCGGTCAGCTGCACTTCTGCTaGCAGCCCTCCTCCAGTCAAGCACCGGCCTCGAGA | + |
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Preference number: 6 (lower is better) Translates to: RTKTQPGQLHFC*QPSSSQAPASR Trigger: TCTCGAGGCCGGTGCTTGACTGGAGGAGGGCTGGCAGCAGAAGTGCAGCTGACCGGGTTGCGTTTTCGTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420557.3 |
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| CDS GCA 72 bp | ACCCCGAGCTCTGCCTCCTGTCCACCCGTGTGTCTGTaGACACAGCATGTTGCTGTCAGGGAACGGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: TPSSASCPPVCL*TQHVAVRERPP Trigger: AGGAGGCCGTTCCCTGACAGCAACATGCTGTGTGCACAGACACACGGGTGGACAGGAGGCAGAGCTCGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 72 bp | AGGTCTGTGGGGGCTGGTGTCTGGCCTCCCTCCTTCTaGCTGGCTGAGCAAAATATCTGCAGGGCGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: RSVGAGVWPPSF*LAEQNICRAQS Trigger: GCTCTGCGCCCTGCAGATATTTTGCTCAGCCAGCCAGAAGGAGGGAGGCCAGACACCAGCCCCCACAGACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CAA 90 bp | CGAGCTCTGCCTCCTGTCCACCCGTGTGTCTGTGCACACAGCATGTaGCTGTCAGGGAACGGCCTCCTGCTTCTCGAGTGCCATGGGACT | + |
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Preference number: 6 (lower is better) Translates to: RALPPVHPCVCAHSM*LSGNGLLLLECHGT Trigger: AGTCCCATGGCACTCGAGAAGCAGGAGGCCGTTCCCTGACAGCAACATGCTGTGTGCACAGACACACGGGTGGACAGGAGGCAGAGCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS TCA 72 bp | CCAGACACGAGGGAAACCCCAGCATCGGCAGAGGAGTaGGATTTTGCCACAGTCTGGCCCTGGCAGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: PDTRETPASAEE*DFATVWPWQLR Trigger: CCTCAACTGCCAGGGCCAGACTGTGGCAAAATCTCACTCCTCTGCCGATGCTGGGGTTTCCCTCGTGTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 72 bp | GAGGGAAACCCCAGCATCGGCAGAGGAGTGAGATTTTaGCACAGTCTGGCCCTGGCAGTTGAGGAGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: EGNPSIGRGVRF*HSLALAVEEQL Trigger: CAGCTGCTCCTCAACTGCCAGGGCCAGACTGTGGCAAAATCTCACTCCTCTGCCGATGCTGGGGTTTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 72 bp | ACAGGGTGCTGGGAGGGAAACATGGATTCACTGCAGTaGTCAGGCCACCAAGCACACCACCTCCCAGACACG | + |
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Preference number: 6 (lower is better) Translates to: TGCWEGNMDSLQ*SGHQAHHLPDT Trigger: CGTGTCTGGGAGGTGGTGTGCTTGGTGGCCTGAGCACTGCAGTGAATCCATGTTTCCCTCCCAGCACCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 72 bp | CACAGGCTCATGTGTGCGATGACTCAGGTCCCTCACTaGAGACACCAGCTGAGAGGAGAGACTGCAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: HRLMCAMTQVPH*RHQLRGETAGP Trigger: AGGCCCTGCAGTCTCTCCTCTCAGCTGGTGTCTCCAGTGAGGGACCTGAGTCATCGCACACATGAGCCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 72 bp | GAATTCTGCCAACCTCCAAGCTCACCATCAGCCTCCTaGAGCCCCACTTGTTTCTGGGGCAGCTACTGGACC | + |
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Preference number: 6 (lower is better) Translates to: EFCQPPSSPSAS*SPTCFWGSYWT Trigger: GGTCCAGTAGCTGCCCCAGAAACAAGTGGGGCTGCAGGAGGCTGATGGTGAGCTTGGAGGTTGGCAGAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 72 bp | TGCTTTCAGTCCCAGGCTGCACCCCGCTGGCCTTTCTaGGCCACACCAGGACCATTCTCTTGGCAAAATCTG | + |
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Preference number: 6 (lower is better) Translates to: CFQSQAAPRWPF*ATPGPFSWQNL Trigger: CAGATTTTGCCAAGAGAATGGTCCTGGTGTGGCCCAGAAAGGCCAGCGGGGTGCAGCCTGGGACTGAAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS TCA 72 bp | GAGGTGCGGCCCTGCCCTCCAGGACACGCAGCTTCATaGGTAGAGAAGAAATCTTATCCAAGGGCGAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: EVRPCPPGHAAS*VEKKSYPRASS Trigger: GCTACTCGCCCTTGGATAAGATTTCTTCTCTACTCATGAAGCTGCGTGTCCTGGAGGGCAGGGCCGCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 72 bp | CCAGAGCTGTCGGCCAAGTTGGAGGACAGAACAGGGTaGTGGGAGGGAAACATGGATTCACTGCAGTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PELSAKLEDRTG*WEGNMDSLQCS Trigger: TGAGCACTGCAGTGAATCCATGTTTCCCTCCCAGCACCCTGTTCTGTCCTCCAACTTGGCCGACAGCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 72 bp | GCCCATGGAGGGTGCTGTGGAGCTTGCTGCAGGTTCTaGTGGATAGGAAATTGTGTCTCATCCACCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: AHGGCCGACCRF*WIGNCVSSTCC Trigger: ACAGCAGGTGGATGAGACACAATTTCCTATCCAGCAGAACCTGCAGCAAGCTCCACAGCACCCTCCATGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 72 bp | GTGCACACAGCATGTTGCTGTCAGGGAACGGCCTCCTaGTTCTCGAGTGCCATGGGACTGGCTTTTGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: VHTACCCQGTAS*FSSAMGLAFVC Trigger: ACAAACAAAAGCCAGTCCCATGGCACTCGAGAAGCAGGAGGCCGTTCCCTGACAGCAACATGCTGTGTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CAA 72 bp | GGAGCAAGACTGAGCCCATGGAGGGTGCTGTGGAGCTaGCTGCAGGTTCTGCTGGATAGGAAATTGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GARLSPWRVLWS*LQVLLDRKLCL Trigger: GAGACACAATTTCCTATCCAGCAGAACCTGCAGCAAGCTCCACAGCACCCTCCATGGGCTCAGTCTTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CCA 72 bp | CATGGAGGGTGCTGTGGAGCTTGCTGCAGGTTCTGCTaGATAGGAAATTGTGTCTCATCCACCTGCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: HGGCCGACCRFC*IGNCVSSTCCL Trigger: CAGACAGCAGGTGGATGAGACACAATTTCCTATCCAGCAGAACCTGCAGCAAGCTCCACAGCACCCTCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS GCA 72 bp | GTCTTAGCCCAGCAGAGCTGTTTTAACACAGACATTTaGAGCCTGCCCAGTACTCTCCTGGATGGATGGTCC | + |
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Preference number: 6 (lower is better) Translates to: VLAQQSCFNTDI*SLPSTLLDGWS Trigger: GGACCATCCATCCAGGAGAGTACTGGGCAGGCTGCAAATGTCTGTGTTAAAACAGCTCTGCTGGGCTAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420557.3 ENST00000625483.1 |
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| CDS CAA 90 bp | AGAAATCCAAAGTCCATTCACAAGAGGAGCTTCTCCGCCAAATCGTaGAAAAATAAAACGAGAAATGAGTCGCCACCGGTATCCGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: RNPKSIHKRSFSAKS*KNKTRNESPPVSAL Trigger: TAAAGCGGATACCGGTGGCGACTCATTTCTCGTTTTATTTTTCAACGATTTGGCGGAGAAGCTCCTCTTGTGAATGGACTTTGGATTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420557.3 |
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