Pregenerated sensors for LINC00551 (Homo sapiens)
Ensembl gene IDs: ENSG00000272274Ensembl transcript IDs: ENST00000607593.1, ENST00000653952.1, ENST00000661468.1, ENST00000663663.1, ENST00000665026.1, ENST00000667614.1
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGAGACCATCAGCAGACAGCAGCGCCATCGGGGCCACCCCAGCTGTaGCCAAGGTCAAATACTCTGGTAGCTCCCAGCCTGGGAATGCGC | + |
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Preference number: 5 (lower is better) Translates to: GDHQQTAAPSGPPQL*PRSNTLVAPSLGMR Trigger: GCGCATTCCCAGGCTGGGAGCTACCAGAGTATTTGACCTTGGGCACAGCTGGGGTGGCCCCGATGGCGCTGCTGTCTGCTGATGGTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS GCA 90 bp | GGAGACCATCAGCAGACAGCAGCGCCATCGGGGCCACCCCAGCTGTaGCCAAGGTCAAATACTCTGGTAGCTCCCAGCCTCCTGCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: GDHQQTAAPSGPPQL*PRSNTLVAPSLLQV Trigger: GACTTGCAGGAGGCTGGGAGCTACCAGAGTATTTGACCTTGGGCACAGCTGGGGTGGCCCCGATGGCGCTGCTGTCTGCTGATGGTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653952.1 |
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| CDS CCA 90 bp | ACCACAGAGCTTTGCTGCTCAGCACTCCTTCCAGGAAGGCCTCGCTaGGGAAGCTGTGGAGACCATCAGCAGACAGCAGCGCCATCGGGG | + |
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Preference number: 5 (lower is better) Translates to: TTELCCSALLPGRPR*GSCGDHQQTAAPSG Trigger: CCCCGATGGCGCTGCTGTCTGCTGATGGTCTCCACAGCTTCCCCAGCGAGGCCTTCCTGGAAGGAGTGCTGAGCAGCAAAGCTCTGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000607593.1 ENST00000653952.1 ENST00000661468.1 |
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| CDS GCA 90 bp | AGAAGATGGACTCTGAAGTGGAACTGCAGAGCTGGCTCATCCTCCTaGTGGCTGGCAGTGAAGCCCCGGCCCTGGCTTGCCGGAGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: RRWTLKWNCRAGSSS*WLAVKPRPWLAGEV Trigger: CACTTCTCCGGCAAGCCAGGGCCGGGGCTTCACTGCCAGCCAGCAGGAGGATGAGCCAGCTCTGCAGTTCCACTTCAGAGTCCATCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000607593.1 ENST00000665026.1 |
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| CDS GCA 90 bp | GGAGACCATCAGCAGACAGCAGCGCCATCGGGGCCACCCCAGCTGTaGCCAAGGTCAAATACTCTGGTAGCTCCCAGCGGGTTTATCAGG | + |
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Preference number: 5 (lower is better) Translates to: GDHQQTAAPSGPPQL*PRSNTLVAPSGFIR Trigger: CCTGATAAACCCGCTGGGAGCTACCAGAGTATTTGACCTTGGGCACAGCTGGGGTGGCCCCGATGGCGCTGCTGTCTGCTGATGGTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661468.1 |
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| CDS TCA 90 bp | CTGGTAGCTCCCAGCCTGGGAATGCGCTCTGTGTGGATTCCACCCTaGCTTCTTCCTGCAGCTGTGCTGCTGCCTCTGCTTCCCTGGACA | + |
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Preference number: 5 (lower is better) Translates to: LVAPSLGMRSVWIPP*LLPAAVLLPLLPWT Trigger: TGTCCAGGGAAGCAGAGGCAGCAGCACAGCTGCAGGAAGAAGTCAGGGTGGAATCCACACAGAGCGCATTCCCAGGCTGGGAGCTACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS GCA 90 bp | TGGCTCATCCTCCTGCTGGCTGGCAGTGAAGCCCCGGCCCTGGCTTaGCGGAGAAGTGCAAGTGTCAGAACTTTCACTGGTGATGACCTG | + |
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Preference number: 5 (lower is better) Translates to: WLILLLAGSEAPALA*RRSASVRTFTGDDL Trigger: CAGGTCATCACCAGTGAAAGTTCTGACACTTGCACTTCTCCGGCAAGCCAGGGCCGGGGCTTCACTGCCAGCCAGCAGGAGGATGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS GCA 90 bp | TGCGCTCTGTGTGGATTCCACCCTGACTTCTTCCTGCAGCTGTGCTaGTGCCTCTGCTTCCCTGGACACTGCATCTCCCTGGGACCCCAT | + |
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Preference number: 5 (lower is better) Translates to: CALCGFHPDFFLQLC*CLCFPGHCISLGPH Trigger: ATGGGGTCCCAGGGAGATGCAGTGTCCAGGGAAGCAGAGGCAGCAGCACAGCTGCAGGAAGAAGTCAGGGTGGAATCCACACAGAGCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS CCA 90 bp | AGAGCTGGCTCATCCTCCTGCTGGCTGGCAGTGAAGCCCCGGCCCTaGCTTGCCGGAGAAGTGCAAGTGTCAGAACTTTCACTGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: RAGSSSCWLAVKPRP*LAGEVQVSELSLVM Trigger: CATCACCAGTGAAAGTTCTGACACTTGCACTTCTCCGGCAAGCCAGGGCCGGGGCTTCACTGCCAGCCAGCAGGAGGATGAGCCAGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000607593.1 ENST00000665026.1 |
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| CDS GCA 90 bp | TGGCTCATCCTCCTGCTGGCTGGCAGTGAAGCCCCGGCCCTGGCTTaGCGGAGAAGTGCAAGTGTCAGAACTTTCACTGGTGATGACCTT | + |
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Preference number: 5 (lower is better) Translates to: WLILLLAGSEAPALA*RRSASVRTFTGDDL Trigger: AAGGTCATCACCAGTGAAAGTTCTGACACTTGCACTTCTCCGGCAAGCCAGGGCCGGGGCTTCACTGCCAGCCAGCAGGAGGATGAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS CCA 90 bp | CCGAGGGCAGCCCCTATGGCGGCATCTTGTATCTACCCATCAGGATaGGTGAGGAGGGTCCCACTGAAGGAAGCTGGATCACTCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: PRAAPMAASCIYPSG*VRRVPLKEAGSLFS Trigger: GGAGAAGAGTGATCCAGCTTCCTTCAGTGGGACCCTCCTCACCCATCCTGATGGGTAGATACAAGATGCCGCCATAGGGGCTGCCCTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS TCA 90 bp | CCAGATACCTCCACCCTTTCATTTCAGCTCCCCTCCAGACACCCATaGGGAAAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: PDTSTLSFQLPSRHP*GKQQQQQQQQQQQQ Trigger: CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTTTCCTCATGGGTGTCTGGAGGGGAGCTGAAATGAAAGGGTGGAGGTATCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS GCA 90 bp | GTTGGTGCCAAGAGTGATCCAAGAAGATGGACTCTGAAGTGGAACTaGAGAGCTGGCTCATCCTCCTGCTGGCTGGCAGTGAAGCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: VGAKSDPRRWTLKWN*RAGSSSCWLAVKPR Trigger: CCGGGGCTTCACTGCCAGCCAGCAGGAGGATGAGCCAGCTCTGCAGTTCCACTTCAGAGTCCATCTTCTTGGATCACTCTTGGCACCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000607593.1 ENST00000665026.1 |
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| CDS GCA 90 bp | GCTCTGTGTGGATTCCACCCTGACTTCTTCCTGCAGCTGTGCTGCTaGCTCTGCTTCCCTGGACACTGCATCTCCCTGGGACCCCATAAT | + |
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Preference number: 5 (lower is better) Translates to: ALCGFHPDFFLQLCC*LCFPGHCISLGPHN Trigger: ATTATGGGGTCCCAGGGAGATGCAGTGTCCAGGGAAGCAGAGGCAGCAGCACAGCTGCAGGAAGAAGTCAGGGTGGAATCCACACAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS GCA 90 bp | TGTGGATTCCACCCTGACTTCTTCCTGCAGCTGTGCTGCTGCCTCTaGTTCCCTGGACACTGCATCTCCCTGGGACCCCATAATATCTTG | + |
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Preference number: 5 (lower is better) Translates to: CGFHPDFFLQLCCCL*FPGHCISLGPHNIL Trigger: CAAGATATTATGGGGTCCCAGGGAGATGCAGTGTCCAGGGAAGCAGAGGCAGCAGCACAGCTGCAGGAAGAAGTCAGGGTGGAATCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS GCA 90 bp | ATGAGGGAGCATGCCTTGAGCACATCGGCATCTTCCGCAAAGGTCTaGACACGACGAATGAGTCAATGTTCTCCTTGGCTCTGTCCGAGG | + |
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Preference number: 5 (lower is better) Translates to: MREHALSTSASSAKV*TRRMSQCSPWLCPR Trigger: CCTCGGACAGAGCCAAGGAGAACATTGACTCATTCGTCGTGTGCAGACCTTTGCGGAAGATGCCGATGTGCTCAAGGCATGCTCCCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CCA 90 bp | TCTTCCGCAAAGGTCTGCACACGACGAATGAGTCAATGTTCTCCTTaGCTCTGTCCGAGGGCAGCCCCTATGGCGGCATCTTGTATCTAC | + |
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Preference number: 5 (lower is better) Translates to: SSAKVCTRRMSQCSP*LCPRAAPMAASCIY Trigger: GTAGATACAAGATGCCGCCATAGGGGCTGCCCTCGGACAGAGCCAAGGAGAACATTGACTCATTCGTCGTGTGCAGACCTTTGCGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS GCA 90 bp | CCCATAAGGGTTAGGGAGGCAGCGCTGAGGGCTTTGAAGGCTGAATaGCTTAGGATTATCCTTGCAGGTCAGTTTGAATCCTCACTCCCG | + |
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Preference number: 5 (lower is better) Translates to: PIRVREAALRALKAE*LRIILAGQFESSLP Trigger: CGGGAGTGAGGATTCAAACTGACCTGCAAGGATAATCCTAAGGCATTCAGCCTTCAAAGCCCTCAGCGCTGCCTCCCTAACCCTTATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CCA 90 bp | GAGGAAACTAAGTCCAAGGCAGCAAGTGATGAGTGCAGGGTCACTTaGAGATACATTTTAGGGCTGCCCCACAAGACCAGCTCCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: EETKSKAASDECRVT*RYILGLPHKTSSRE Trigger: CTCCCTGGAGCTGGTCTTGTGGGGCAGCCCTAAAATGTATCTCCAAGTGACCCTGCACTCATCACTTGCTGCCTTGGACTTAGTTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653952.1 |
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| CDS TCA 90 bp | AACTCAATACAGTTGGTGCCAAGAGTGATCCAAGAAGATGGACTCTaGAGTGGAACTGCAGAGCTGGCTCATCCTCCTGCTGGCTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: NSIQLVPRVIQEDGL*SGTAELAHPPAGWQ Trigger: CTGCCAGCCAGCAGGAGGATGAGCCAGCTCTGCAGTTCCACTTCAGAGTCCATCTTCTTGGATCACTCTTGGCACCAACTGTATTGAGTT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000607593.1 ENST00000665026.1 |
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| CDS TCA 90 bp | TCCACCATGCACAGAGTACACAGGCAAACCCTGGGGAGGGATTCCTaGAAACTCGTCTCTCTGATCTCAGGAAGGAGGGCAGGAAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: STMHRVHRQTLGRDS*KLVSLISGRRAGSF Trigger: AAAACTTCCTGCCCTCCTTCCTGAGATCAGAGAGACGAGTTTTCAGGAATCCCTCCCCAGGGTTTGCCTGTGTACTCTGTGCATGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS GCA 90 bp | CCCAAGGTCAAATACTCTGGTAGCTCCCAGCGGGTTTATCAGGGCTaGACTAGGTCACTCCCGTTTGTTCTTCCAAATCCACCTTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PKVKYSGSSQRVYQG*TRSLPFVLPNPPSF Trigger: GAAGGAAGGTGGATTTGGAAGAACAAACGGGAGTGACCTAGTGCAGCCCTGATAAACCCGCTGGGAGCTACCAGAGTATTTGACCTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661468.1 |
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| CDS CCA 90 bp | CTTCAGCACCCACCCAGGACAAAGTACGCTGTATGCCGGCAAGTGTaGTCAAGACCATATAACCTGAGTTCTTCCTGCTCTTGCTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: LQHPPRTKYAVCRQV*SRPYNLSSSCSCCC Trigger: ACAGCAGCAAGAGCAGGAAGAACTCAGGTTATATGGTCTTGACCACACTTGCCGGCATACAGCGTACTTTGTCCTGGGTGGGTGCTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS GCA 90 bp | CATTCTACGAATGAGGAAACTAAGTCCAAGGCAGCAAGTGATGAGTaGAGGGTCACTTGGAGATACATTTTAGGGCTGCCCCACAAGACC | + |
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Preference number: 5 (lower is better) Translates to: HSTNEETKSKAASDE*RVTWRYILGLPHKT Trigger: GGTCTTGTGGGGCAGCCCTAAAATGTATCTCCAAGTGACCCTGCACTCATCACTTGCTGCCTTGGACTTAGTTTCCTCATTCGTAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653952.1 ENST00000665026.1 ENST00000667614.1 |
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| CDS GCA 90 bp | TTCTCCATTTTTCTTCAGCACCCACCCAGGACAAAGTACGCTGTATaGCGGCAAGTGTGGTCAAGACCATATAACCTGAGTTCTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: FSIFLQHPPRTKYAV*RQVWSRPYNLSSSC Trigger: GCAGGAAGAACTCAGGTTATATGGTCTTGACCACACTTGCCGGCATACAGCGTACTTTGTCCTGGGTGGGTGCTGAAGAAAAATGGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS GCA 90 bp | CCCATTCCAACTCGAGGTCTGGGTCTTCCAGAAAAGTCTACCTCCTaGAAGTCTCATAAGCACTTCAGAAAGTGTGGTGTCTCCATTCTA | + |
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Preference number: 5 (lower is better) Translates to: PIPTRGLGLPEKSTS*KSHKHFRKCGVSIL Trigger: TAGAATGGAGACACCACACTTTCTGAAGTGCTTATGAGACTTGCAGGAGGTAGACTTTTCTGGAAGACCCAGACCTCGAGTTGGAATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663663.1 ENST00000667614.1 |
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| CDS TCA 90 bp | AAGTCTATTTCCCAGAACTCAACTCAATACAGTTGGTGCCAAGAGTaGTCCAAGAAGATGGACTCTGAAGTGGAACTGCAGAGCTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: KSISQNSTQYSWCQE*SKKMDSEVELQSWL Trigger: GAGCCAGCTCTGCAGTTCCACTTCAGAGTCCATCTTCTTGGATCACTCTTGGCACCAACTGTATTGAGTTGAGTTCTGGGAAATAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000607593.1 ENST00000665026.1 |
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| CDS TCA 90 bp | GTAGGGGGAAATAACAAAGGCAGGGATGAGGGAGTGCACAGAGTATaGTCAGGAATGTTCAGGAAAAGAATTGTGCCATGTAGTAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: VGGNNKGRDEGVHRV*SGMFRKRIVPCSRS Trigger: GCTCCTACTACATGGCACAATTCTTTTCCTGAACATTCCTGATCATACTCTGTGCACTCCCTCATCCCTGCCTTTGTTATTTCCCCCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CCA 90 bp | CAACCTATTTGCTGCATGTGCAAGGTTGAGTTTGTGTTTCAGTCATaGAGTTGGTTTTGTTCTCCATTTTTCTTCAGCACCCACCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: QPICCMCKVEFVFQS*SWFCSPFFFSTHPG Trigger: TCCTGGGTGGGTGCTGAAGAAAAATGGAGAACAAAACCAACTCCATGACTGAAACACAAACTCAACCTTGCACATGCAGCAAATAGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS TCA 90 bp | ACACTGATTGATGCAAGGGCTTTTCCAGGAATAGCTCACTATGACTaGGAGAACTGGATGGCATGGGTTTATAGGCAAGCAAAGAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: TLIDARAFPGIAHYD*ENWMAWVYRQAKKR Trigger: TCTTTTCTTTGCTTGCCTATAAACCCATGCCATCCAGTTCTCTCAGTCATAGTGAGCTATTCCTGGAAAAGCCCTTGCATCAATCAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS CCA 90 bp | ATTTGCTGCATGTGCAAGGTTGAGTTTGTGTTTCAGTCATGGAGTTaGTTTTGTTCTCCATTTTTCTTCAGCACCCACCCAGGACAAAGT | + |
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Preference number: 5 (lower is better) Translates to: ICCMCKVEFVFQSWS*FCSPFFFSTHPGQS Trigger: ACTTTGTCCTGGGTGGGTGCTGAAGAAAAATGGAGAACAAAACCAACTCCATGACTGAAACACAAACTCAACCTTGCACATGCAGCAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS GCA 90 bp | AGGAAACACTGTGTAACAGAAGCAACATGGATCTTATTTAGCTGTTaGAGATGTTGGTGGTTAAAACTACCCGACTTTCACTGGTTGATC | + |
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Preference number: 5 (lower is better) Translates to: RKHCVTEATWILFSC*RCWWLKLPDFHWLI Trigger: GATCAACCAGTGAAAGTCGGGTAGTTTTAACCACCAACATCTGCAACAGCTAAATAAGATCCATGTTGCTTCTGTTACACAGTGTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS GCA 90 bp | GGGTGCCAAGAATATTCAATGTGGAACAGTCTTTTCAATAAATGGTaGTGCGACAACCGTATGTCCACATTCTGGATAATAAAGTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: GCQEYSMWNSLFNKW*CDNRMSTFWIIKLD Trigger: ATCCAACTTTATTATCCAGAATGTGGACATACGGTTGTCGCAGCACCATTTATTGAAAAGACTGTTCCACATTGAATATTCTTGGCACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CCA 90 bp | CAAGGGTGCCAAGAATATTCAATGTGGAACAGTCTTTTCAATAAATaGTGCTGCGACAACCGTATGTCCACATTCTGGATAATAAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: QGCQEYSMWNSLFNK*CCDNRMSTFWIIKL Trigger: CAACTTTATTATCCAGAATGTGGACATACGGTTGTCGCAGCACCATTTATTGAAAAGACTGTTCCACATTGAATATTCTTGGCACCCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS GCA 90 bp | ATCCAGTTTTCTTCTCTTCTATCTCCACCTGACATCCCTTCCTCATaGTATAGCTGGTTTGTTCCCAAATACAATAAAGAAAAGTATCTG | + |
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Preference number: 5 (lower is better) Translates to: IQFSSLLSPPDIPSS*YSWFVPKYNKEKYL Trigger: CAGATACTTTTCTTTATTGTATTTGGGAACAAACCAGCTATAGCATGAGGAAGGGATGTCAGGTGGAGATAGAAGAGAAGAAAACTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS GCA 90 bp | GCACCTATAGGCAAAATACATTATTATACTTGTTTTCGTATGACCTaGAAGTCTATTTCCCAGAACTCAACTCAATACAGTTGGTGCCAA | + |
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Preference number: 5 (lower is better) Translates to: APIGKIHYYTCFRMT*KSISQNSTQYSWCQ Trigger: TTGGCACCAACTGTATTGAGTTGAGTTCTGGGAAATAGACTTGCAGGTCATACGAAAACAAGTATAATAATGTATTTTGCCTATAGGTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS GCA 90 bp | TTCTCCAAAGAAGATATGCAACTAGCCTATAAGTATGTGAAGAGATaGTCATCAGTAGTCATTAGGGAAATGCAAACCAAATCACAATGT | + |
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Preference number: 5 (lower is better) Translates to: FSKEDMQLAYKYVKR*SSVVIREMQTKSQC Trigger: ACATTGTGATTTGGTTTGCATTTCCCTAATGACTACTGATGAGCATCTCTTCACATACTTATAGGCTAGTTGCATATCTTCTTTGGAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS GCA 72 bp | CAGCAGACAGCAGCGCCATCGGGGCCACCCCAGCTGTaGCCAAGGTCAAATACTCTGGTAGCTCCCAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: QQTAAPSGPPQL*PRSNTLVAPSG Trigger: CCCGCTGGGAGCTACCAGAGTATTTGACCTTGGGCACAGCTGGGGTGGCCCCGATGGCGCTGCTGTCTGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661468.1 |
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| CDS CCA 72 bp | CTGAAGTGGAACTGCAGAGCTGGCTCATCCTCCTGCTaGCTGGCAGTGAAGCCCCGGCCCTGGCTTGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: LKWNCRAGSSSC*LAVKPRPWLAG Trigger: TCCGGCAAGCCAGGGCCGGGGCTTCACTGCCAGCCAGCAGGAGGATGAGCCAGCTCTGCAGTTCCACTTCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000607593.1 ENST00000665026.1 |
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| CDS CCA 72 bp | AGCACTCCTTCCAGGAAGGCCTCGCTGGGGAAGCTGTaGAGACCATCAGCAGACAGCAGCGCCATCGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: STPSRKASLGKL*RPSADSSAIGA Trigger: GGCCCCGATGGCGCTGCTGTCTGCTGATGGTCTCCACAGCTTCCCCAGCGAGGCCTTCCTGGAAGGAGTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000607593.1 ENST00000653952.1 ENST00000661468.1 |
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| CDS GCA 72 bp | CAGCAGACAGCAGCGCCATCGGGGCCACCCCAGCTGTaGCCAAGGTCAAATACTCTGGTAGCTCCCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: QQTAAPSGPPQL*PRSNTLVAPSL Trigger: CAGGCTGGGAGCTACCAGAGTATTTGACCTTGGGCACAGCTGGGGTGGCCCCGATGGCGCTGCTGTCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS GCA 72 bp | CAGCAGACAGCAGCGCCATCGGGGCCACCCCAGCTGTaGCCAAGGTCAAATACTCTGGTAGCTCCCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: QQTAAPSGPPQL*PRSNTLVAPSL Trigger: GAGGCTGGGAGCTACCAGAGTATTTGACCTTGGGCACAGCTGGGGTGGCCCCGATGGCGCTGCTGTCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653952.1 |
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| CDS GCA 72 bp | CTCCTGCTGGCTGGCAGTGAAGCCCCGGCCCTGGCTTaGCGGAGAAGTGCAAGTGTCAGAACTTTCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: LLLAGSEAPALA*RRSASVRTFTG Trigger: ACCAGTGAAAGTTCTGACACTTGCACTTCTCCGGCAAGCCAGGGCCGGGGCTTCACTGCCAGCCAGCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000607593.1 ENST00000665026.1 |
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| CDS CAA 72 bp | TTGGCTCTGTCCGAGGGCAGCCCCTATGGCGGCATCTaGTATCTACCCATCAGGATGGGTGAGGAGGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: LALSEGSPYGGI*YLPIRMGEEGP Trigger: GGGACCCTCCTCACCCATCCTGATGGGTAGATACAAGATGCCGCCATAGGGGCTGCCCTCGGACAGAGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CCA 72 bp | TCATCCTCCTGCTGGCTGGCAGTGAAGCCCCGGCCCTaGCTTGCCGGAGAAGTGCAAGTGTCAGAACTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSSCWLAVKPRP*LAGEVQVSELS Trigger: TGAAAGTTCTGACACTTGCACTTCTCCGGCAAGCCAGGGCCGGGGCTTCACTGCCAGCCAGCAGGAGGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000607593.1 ENST00000665026.1 |
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| CDS CAA 90 bp | CTGTTCAGCTGGTTCCCCTTTGTCCTGAGTGGTGACCACAGAGCTTaGCTGCTCAGCACTCCTTCCAGGAAGGCCTCGCTGGGGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LFSWFPFVLSGDHRA*LLSTPSRKASLGKL Trigger: CAGCTTCCCCAGCGAGGCCTTCCTGGAAGGAGTGCTGAGCAGCAAAGCTCTGTGGTCACCACTCAGGACAAAGGGGAACCAGCTGAACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000607593.1 ENST00000653952.1 ENST00000661468.1 |
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| CDS CAA 90 bp | ATGTTCTCCTTGGCTCTGTCCGAGGGCAGCCCCTATGGCGGCATCTaGTATCTACCCATCAGGATGGGTGAGGAGGGTCCCACTGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: MFSLALSEGSPYGGI*YLPIRMGEEGPTEG Trigger: TCCTTCAGTGGGACCCTCCTCACCCATCCTGATGGGTAGATACAAGATGCCGCCATAGGGGCTGCCCTCGGACAGAGCCAAGGAGAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CCA 72 bp | TCCAAGAAGATGGACTCTGAAGTGGAACTGCAGAGCTaGCTCATCCTCCTGCTGGCTGGCAGTGAAGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: SKKMDSEVELQS*LILLLAGSEAP Trigger: CGGGGCTTCACTGCCAGCCAGCAGGAGGATGAGCCAGCTCTGCAGTTCCACTTCAGAGTCCATCTTCTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000607593.1 ENST00000665026.1 |
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| CDS CAA 72 bp | TGGTTCCCCTTTGTCCTGAGTGGTGACCACAGAGCTTaGCTGCTCAGCACTCCTTCCAGGAAGGCCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: WFPFVLSGDHRA*LLSTPSRKASL Trigger: CAGCGAGGCCTTCCTGGAAGGAGTGCTGAGCAGCAAAGCTCTGTGGTCACCACTCAGGACAAAGGGGAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000607593.1 ENST00000653952.1 ENST00000661468.1 |
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| CDS TCA 72 bp | TCCACCCTTTCATTTCAGCTCCCCTCCAGACACCCATaGGGAAAACAGCAGCAGCAGCAGCAGCAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: STLSFQLPSRHP*GKQQQQQQQQQ Trigger: CTGCTGCTGCTGCTGCTGCTGCTGCTGTTTTCCTCATGGGTGTCTGGAGGGGAGCTGAAATGAAAGGGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CCA 72 bp | GCCCCTATGGCGGCATCTTGTATCTACCCATCAGGATaGGTGAGGAGGGTCCCACTGAAGGAAGCTGGATCA | + |
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Preference number: 6 (lower is better) Translates to: APMAASCIYPSG*VRRVPLKEAGS Trigger: TGATCCAGCTTCCTTCAGTGGGACCCTCCTCACCCATCCTGATGGGTAGATACAAGATGCCGCCATAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CCA 72 bp | AAGGTCTGCACACGACGAATGAGTCAATGTTCTCCTTaGCTCTGTCCGAGGGCAGCCCCTATGGCGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: KVCTRRMSQCSP*LCPRAAPMAAS Trigger: AGATGCCGCCATAGGGGCTGCCCTCGGACAGAGCCAAGGAGAACATTGACTCATTCGTCGTGTGCAGACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CAA 72 bp | GGCAGTGATGTCACCCCTCACATGAGGGAGCATGCCTaGAGCACATCGGCATCTTCCGCAAAGGTCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: GSDVTPHMREHA*STSASSAKVCT Trigger: TGTGCAGACCTTTGCGGAAGATGCCGATGTGCTCAAGGCATGCTCCCTCATGTGAGGGGTGACATCACTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CAA 90 bp | GTAGCTCCCAGCGGGTTTATCAGGGCTGCACTAGGTCACTCCCGTTaGTTCTTCCAAATCCACCTTCCTTCCCTCTTCGCCTCGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: VAPSGFIRAALGHSR*FFQIHLPSLFASLS Trigger: AGACAGCGAGGCGAAGAGGGAAGGAAGGTGGATTTGGAAGAACAAACGGGAGTGACCTAGTGCAGCCCTGATAAACCCGCTGGGAGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661468.1 |
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| CDS TCA 72 bp | CATCGGCATCTTCCGCAAAGGTCTGCACACGACGAATaGGTCAATGTTCTCCTTGGCTCTGTCCGAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: HRHLPQRSAHDE*VNVLLGSVRGQ Trigger: CTGCCCTCGGACAGAGCCAAGGAGAACATTGACTCATTCGTCGTGTGCAGACCTTTGCGGAAGATGCCGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS TCA 72 bp | CACAGAGTACACAGGCAAACCCTGGGGAGGGATTCCTaGAAACTCGTCTCTCTGATCTCAGGAAGGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: HRVHRQTLGRDS*KLVSLISGRRA Trigger: TGCCCTCCTTCCTGAGATCAGAGAGACGAGTTTTCAGGAATCCCTCCCCAGGGTTTGCCTGTGTACTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CAA 72 bp | AGCGGGTTTATCAGGGCTGCACTAGGTCACTCCCGTTaGTTCTTCCAAATCCACCTTCCTTCCCTCTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: SGFIRAALGHSR*FFQIHLPSLFA Trigger: GGCGAAGAGGGAAGGAAGGTGGATTTGGAAGAACAAACGGGAGTGACCTAGTGCAGCCCTGATAAACCCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661468.1 |
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| CDS CAA 90 bp | ATCTTCCGCAAAGGTCTGCACACGACGAATGAGTCAATGTTCTCCTaGGCTCTGTCCGAGGGCAGCCCCTATGGCGGCATCTTGTATCTA | + |
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Preference number: 6 (lower is better) Translates to: IFRKGLHTTNESMFS*ALSEGSPYGGILYL Trigger: TAGATACAAGATGCCGCCATAGGGGCTGCCCTCGGACAGAGCCAAGGAGAACATTGACTCATTCGTCGTGTGCAGACCTTTGCGGAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS GCA 72 bp | CATGCCTTGAGCACATCGGCATCTTCCGCAAAGGTCTaGACACGACGAATGAGTCAATGTTCTCCTTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: HALSTSASSAKV*TRRMSQCSPWL Trigger: GAGCCAAGGAGAACATTGACTCATTCGTCGTGTGCAGACCTTTGCGGAAGATGCCGATGTGCTCAAGGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CCA 72 bp | GCAAGTGTCAGAACTTTCACTGGTGATGACCTGGGGTaGGAAAGAGGTGGGAGAGAATACCCTGGTAGATGG | + |
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Preference number: 6 (lower is better) Translates to: ASVRTFTGDDLG*ERGGREYPGRW Trigger: CCATCTACCAGGGTATTCTCTCCCACCTCTTTCCCACCCCAGGTCATCACCAGTGAAAGTTCTGACACTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS CAA 72 bp | TTCGGGTTTATCAGGGCTGCACTAGGTCACTCCCGTTaGTTCTTCCAAATCCACCTTCCTTCCCTCTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: FGFIRAALGHSR*FFQIHLPSLFA Trigger: GGCGAAGAGGGAAGGAAGGTGGATTTGGAAGAACAAACGGGAGTGACCTAGTGCAGCCCTGATAAACCCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS CAA 90 bp | AACACTGCTTTCGGGTTTATCAGGGCTGCACTAGGTCACTCCCGTTaGTTCTTCCAAATCCACCTTCCTTCCCTCTTCGCCTCGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: NTAFGFIRAALGHSR*FFQIHLPSLFASLS Trigger: AGACAGCGAGGCGAAGAGGGAAGGAAGGTGGATTTGGAAGAACAAACGGGAGTGACCTAGTGCAGCCCTGATAAACCCGAAAGCAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS CAA 90 bp | TGTAAATTAGGCAGTGATGTCACCCCTCACATGAGGGAGCATGCCTaGAGCACATCGGCATCTTCCGCAAAGGTCTGCACACGACGAATG | + |
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Preference number: 6 (lower is better) Translates to: CKLGSDVTPHMREHA*STSASSAKVCTRRM Trigger: CATTCGTCGTGTGCAGACCTTTGCGGAAGATGCCGATGTGCTCAAGGCATGCTCCCTCATGTGAGGGGTGACATCACTGCCTAATTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CAA 90 bp | CAGGCTCCACAGATGCCTGTCGTGATGTTTGAGCCAGGTCGTTTTTaGTTGTCACATGAAAGGCTCTGTTCAGCTGGTTCCCCTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: QAPQMPVVMFEPGRF*LSHERLCSAGSPLS Trigger: GGACAAAGGGGAACCAGCTGAACAGAGCCTTTCATGTGACAACAAAAAACGACCTGGCTCAAACATCACGACAGGCATCTGTGGAGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000607593.1 ENST00000653952.1 ENST00000661468.1 |
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| CDS CCA 72 bp | CCACCCAGGACAAAGTACGCTGTATGCCGGCAAGTGTaGTCAAGACCATATAACCTGAGTTCTTCCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PPRTKYAVCRQV*SRPYNLSSSCS Trigger: AGAGCAGGAAGAACTCAGGTTATATGGTCTTGACCACACTTGCCGGCATACAGCGTACTTTGTCCTGGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS GCA 72 bp | CTCCAGCTCCAGATCCTCCAGCTAGAAGAGCAGCCCTaGAAGTCTATTTCCCAGAACTCAACTCAATACAGT | + |
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Preference number: 6 (lower is better) Translates to: LQLQILQLEEQP*KSISQNSTQYS Trigger: ACTGTATTGAGTTGAGTTCTGGGAAATAGACTTGCAGGGCTGCTCTTCTAGCTGGAGGATCTGGAGCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS GCA 72 bp | TTTCTTCAGCACCCACCCAGGACAAAGTACGCTGTATaGCGGCAAGTGTGGTCAAGACCATATAACCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: FLQHPPRTKYAV*RQVWSRPYNLS Trigger: ACTCAGGTTATATGGTCTTGACCACACTTGCCGGCATACAGCGTACTTTGTCCTGGGTGGGTGCTGAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS GCA 72 bp | AAATACTCTGGTAGCTCCCAGCGGGTTTATCAGGGCTaGACTAGGTCACTCCCGTTTGTTCTTCCAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: KYSGSSQRVYQG*TRSLPFVLPNP Trigger: TGGATTTGGAAGAACAAACGGGAGTGACCTAGTGCAGCCCTGATAAACCCGCTGGGAGCTACCAGAGTATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661468.1 |
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| CDS GCA 72 bp | ACTCGAGGTCTGGGTCTTCCAGAAAAGTCTACCTCCTaGAAGTCTCATAAGCACTTCAGAAAGTGTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: TRGLGLPEKSTS*KSHKHFRKCGV Trigger: GACACCACACTTTCTGAAGTGCTTATGAGACTTGCAGGAGGTAGACTTTTCTGGAAGACCCAGACCTCGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663663.1 ENST00000667614.1 |
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| CDS CAA 72 bp | CAGATGCCTGTCGTGATGTTTGAGCCAGGTCGTTTTTaGTTGTCACATGAAAGGCTCTGTTCAGCTGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: QMPVVMFEPGRF*LSHERLCSAGS Trigger: GGAACCAGCTGAACAGAGCCTTTCATGTGACAACAAAAAACGACCTGGCTCAAACATCACGACAGGCATCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000607593.1 ENST00000653952.1 ENST00000661468.1 |
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| CDS TCA 72 bp | GATGCAAGGGCTTTTCCAGGAATAGCTCACTATGACTaGGAGAACTGGATGGCATGGGTTTATAGGCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: DARAFPGIAHYD*ENWMAWVYRQA Trigger: TGCTTGCCTATAAACCCATGCCATCCAGTTCTCTCAGTCATAGTGAGCTATTCCTGGAAAAGCCCTTGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS CAA 90 bp | ATGATCATGGTAAACCCAAAGTATGAGCAATACAACACGTTTGAGTaGTCTGGCTTAATGTCCTTCGGCCAGAAAGCTGCGGGTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: MIMVNPKYEQYNTFE*SGLMSFGQKAAGSD Trigger: GTCAGAACCCGCAGCTTTCTGGCCGAAGGACATTAAGCCAGACAACTCAAACGTGTTGTATTGCTCATACTTTGGGTTTACCATGATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS TCA 72 bp | CCGGAATTAGGTAGTGGTGATGGTTGCATAAGGCTGTaGATGTACTCACAGCTCCTGAATTGTTCACTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PELGSGDGCIRL*MYSQLLNCSLR Trigger: TCTGAGTGAACAATTCAGGAGCTGTGAGTACATTCACAGCCTTATGCAACCATCACCACTACCTAATTCCGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS TCA 72 bp | TATTCTCATCTCAACCGGGTAAAAACCCACAGAAACTaGGGCCACCGAGATGCCAACTTATCAGTGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: YSHLNRVKTHRN*GHRDANLSVQK Trigger: TTTCTGCACTGATAAGTTGGCATCTCGGTGGCCTCAGTTTCTGTGGGTTTTTACCCGGTTGAGATGAGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS CAA 72 bp | GTAAACCCAAAGTATGAGCAATACAACACGTTTGAGTaGTCTGGCTTAATGTCCTTCGGCCAGAAAGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: VNPKYEQYNTFE*SGLMSFGQKAA Trigger: CGCAGCTTTCTGGCCGAAGGACATTAAGCCAGACAACTCAAACGTGTTGTATTGCTCATACTTTGGGTTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS TCA 72 bp | CTGTATGCCGGCAAGTGTGGTCAAGACCATATAACCTaGGTTCTTCCTGCTCTTGCTGCTGTGAAAATTTTA | + |
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Preference number: 6 (lower is better) Translates to: LYAGKCGQDHIT*VLPALAAVKIL Trigger: TAAAATTTTCACAGCAGCAAGAGCAGGAAGAACTCAGGTTATATGGTCTTGACCACACTTGCCGGCATACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS TCA 72 bp | AATAACAAAGGCAGGGATGAGGGAGTGCACAGAGTATaGTCAGGAATGTTCAGGAAAAGAATTGTGCCATGT | + |
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Preference number: 6 (lower is better) Translates to: NNKGRDEGVHRV*SGMFRKRIVPC Trigger: ACATGGCACAATTCTTTTCCTGAACATTCCTGATCATACTCTGTGCACTCCCTCATCCCTGCCTTTGTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS TCA 72 bp | CCTCCTACAAAAGACCTTTGTGCTTGTAAGATCAGCTaGAGCTCAGGATGTCTGCACATCAAGTGTTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: PPTKDLCACKIS*SSGCLHIKCLS Trigger: ACTTAAACACTTGATGTGCAGACATCCTGAGCTTCAGCTGATCTTACAAGCACAAAGGTCTTTTGTAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667614.1 |
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| CDS GCA 72 bp | CTTTGTAAACAGTCCCTTTATCATCTTCATCTGGGATaGCAACCATTTCCTGTTGGGACACTGATTGATGCA | + |
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Preference number: 6 (lower is better) Translates to: LCKQSLYHLHLG*QPFPVGTLIDA Trigger: TGCATCAATCAGTGTCCCAACAGGAAATGGTTGGCATCCCAGATGAAGATGATAAAGGGACTGTTTACAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000607593.1 ENST00000661468.1 |
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| CDS CCA 72 bp | TGCTGCATGTGCAAGGTTGAGTTTGTGTTTCAGTCATaGAGTTGGTTTTGTTCTCCATTTTTCTTCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: CCMCKVEFVFQS*SWFCSPFFFST Trigger: GGTGCTGAAGAAAAATGGAGAACAAAACCAACTCCATGACTGAAACACAAACTCAACCTTGCACATGCAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS CCA 72 bp | GCAACATGGATCTTATTTAGCTGTTGCAGATGTTGGTaGTTAAAACTACCCGACTTTCACTGGTTGATCTGG | + |
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Preference number: 6 (lower is better) Translates to: ATWILFSCCRCW*LKLPDFHWLIW Trigger: CCAGATCAACCAGTGAAAGTCGGGTAGTTTTAACCACCAACATCTGCAACAGCTAAATAAGATCCATGTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS CAA 72 bp | GAATGGGAAGTGATTACTAATGGGCCCAGGATTTCTTaGTGGGGTGATGAAAATGTTCCGGAATTAGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: EWEVITNGPRIS*WGDENVPELGS Trigger: ACTACCTAATTCCGGAACATTTTCATCACCCCACAAAGAAATCCTGGGCCCATTAGTAATCACTTCCCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CCA 72 bp | GAAGCAACATGGATCTTATTTAGCTGTTGCAGATGTTaGTGGTTAAAACTACCCGACTTTCACTGGTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: EATWILFSCCRC*WLKLPDFHWLI Trigger: GATCAACCAGTGAAAGTCGGGTAGTTTTAACCACCAACATCTGCAACAGCTAAATAAGATCCATGTTGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS GCA 72 bp | TGTGTAACAGAAGCAACATGGATCTTATTTAGCTGTTaGAGATGTTGGTGGTTAAAACTACCCGACTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CVTEATWILFSC*RCWWLKLPDFH Trigger: GTGAAAGTCGGGTAGTTTTAACCACCAACATCTGCAACAGCTAAATAAGATCCATGTTGCTTCTGTTACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665026.1 |
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| CDS CAA 90 bp | AACAATGCAGGTCTTGGCACCTATAGGCAAAATACATTATTATACTaGTTTTCGTATGACCTGCAAGTCTATTTCCCAGAACTCAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: NNAGLGTYRQNTLLY*FSYDLQVYFPELNS Trigger: TGAGTTGAGTTCTGGGAAATAGACTTGCAGGTCATACGAAAACAAGTATAATAATGTATTTTGCCTATAGGTGCCAAGACCTGCATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS GCA 72 bp | TATTCAATGTGGAACAGTCTTTTCAATAAATGGTGCTaGGACAACCGTATGTCCACATTCTGGATAATAAAG | + |
|
Preference number: 6 (lower is better) Translates to: YSMWNSLFNKWC*DNRMSTFWIIK Trigger: CTTTATTATCCAGAATGTGGACATACGGTTGTCGCAGCACCATTTATTGAAAAGACTGTTCCACATTGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS GCA 72 bp | GAATATTCAATGTGGAACAGTCTTTTCAATAAATGGTaGTGCGACAACCGTATGTCCACATTCTGGATAATA | + |
|
Preference number: 6 (lower is better) Translates to: EYSMWNSLFNKW*CDNRMSTFWII Trigger: TATTATCCAGAATGTGGACATACGGTTGTCGCAGCACCATTTATTGAAAAGACTGTTCCACATTGAATATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663663.1 |
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| CDS CAA 72 bp | GGTCTTGGCACCTATAGGCAAAATACATTATTATACTaGTTTTCGTATGACCTGCAAGTCTATTTCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GLGTYRQNTLLY*FSYDLQVYFPE Trigger: TTCTGGGAAATAGACTTGCAGGTCATACGAAAACAAGTATAATAATGTATTTTGCCTATAGGTGCCAAGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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| CDS GCA 72 bp | GGCAAAATACATTATTATACTTGTTTTCGTATGACCTaGAAGTCTATTTCCCAGAACTCAACTCAATACAGT | + |
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Preference number: 6 (lower is better) Translates to: GKIHYYTCFRMT*KSISQNSTQYS Trigger: ACTGTATTGAGTTGAGTTCTGGGAAATAGACTTGCAGGTCATACGAAAACAAGTATAATAATGTATTTTGCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607593.1 |
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