Pregenerated sensors for LINC00524 (Homo sapiens)
Ensembl gene IDs: ENSG00000259023Ensembl transcript IDs: ENST00000556987.1, ENST00000665068.1, ENST00000670271.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGGCTGAGATGCTTGTGGACACCTGGGGCAGCGGCTGTGGGCTGTaGTCTCCCGGGCTGTGCAGGTCAGGAGGTCAGGAGGTCTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: GAEMLVDTWGSGCGL*SPGLCRSGGQEVSG Trigger: TCCAGAGACCTCCTGACCTCCTGACCTGCACAGCCCGGGAGACCACAGCCCACAGCCGCTGCCCCAGGTGTCCACAAGCATCTCAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000556987.1 ENST00000665068.1 ENST00000670271.1 |
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| CDS CCA 90 bp | AGGAGATGCGTGGGCTGTGGAGGGGCTGAGATGCTTGTGGACACCTaGGGCAGCGGCTGTGGGCTGTGGTCTCCCGGGCTGTGCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: RRCVGCGGAEMLVDT*GSGCGLWSPGLCRS Trigger: TGACCTGCACAGCCCGGGAGACCACAGCCCACAGCCGCTGCCCCAGGTGTCCACAAGCATCTCAGCCCCTCCACAGCCCACGCATCTCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556987.1 ENST00000665068.1 ENST00000670271.1 |
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| CDS GCA 90 bp | GTGGACACCTGGGGCAGCGGCTGTGGGCTGTGGTCTCCCGGGCTGTaGAGGTCAGGAGGTCAGGAGGTCTCTGGAGAGAGGCATCATCAT | + |
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Preference number: 5 (lower is better) Translates to: VDTWGSGCGLWSPGL*RSGGQEVSGERHHH Trigger: ATGATGATGCCTCTCTCCAGAGACCTCCTGACCTCCTGACCTGCACAGCCCGGGAGACCACAGCCCACAGCCGCTGCCCCAGGTGTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556987.1 ENST00000665068.1 ENST00000670271.1 |
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| CDS CCA 90 bp | GGAGCTGGGCCTTCCGAGGTTGATGGTCCCTCCTGGTTAACTCCGTaGCCAGCAAGAGGTCCCAGGAGGCCATCACTGCACACAGCAACC | + |
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Preference number: 5 (lower is better) Translates to: GAGPSEVDGPSWLTP*PARGPRRPSLHTAT Trigger: GGTTGCTGTGTGCAGTGATGGCCTCCTGGGACCTCTTGCTGGCCACGGAGTTAACCAGGAGGGACCATCAACCTCGGAAGGCCCAGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556987.1 |
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| CDS CCA 90 bp | GCTGGGCCTGCTTCCGAGGTTGATGGTCCCTCCTGGTTAACTCCGTaGCCAGCAAGAGGTCCCAGGAGGCCATCACTGCACACAGCAACC | + |
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Preference number: 5 (lower is better) Translates to: AGPASEVDGPSWLTP*PARGPRRPSLHTAT Trigger: GGTTGCTGTGTGCAGTGATGGCCTCCTGGGACCTCTTGCTGGCCACGGAGTTAACCAGGAGGGACCATCAACCTCGGAAGCAGGCCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS CCA 90 bp | TGGGATGACCGCAAGGGCGCCAGGCACACAGTGGGTTTGCGACTGTaGTATCTGCCTCTCCCACGGGAGGCAGACCCCATCACCAATTTC | + |
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Preference number: 5 (lower is better) Translates to: WDDRKGARHTVGLRL*YLPLPREADPITNF Trigger: GAAATTGGTGATGGGGTCTGCCTCCCGTGGGAGAGGCAGATACCACAGTCGCAAACCCACTGTGTGCCTGGCGCCCTTGCGGTCATCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS CCA 90 bp | TGTGGGCAAAAATCTGGGATGACCGCAAGGGCGCCAGGCACACAGTaGGTTTGCGACTGTGGTATCTGCCTCTCCCACGGGAGGCAGACC | + |
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Preference number: 5 (lower is better) Translates to: CGQKSGMTARAPGTQ*VCDCGICLSHGRQT Trigger: GGTCTGCCTCCCGTGGGAGAGGCAGATACCACAGTCGCAAACCCACTGTGTGCCTGGCGCCCTTGCGGTCATCCCAGATTTTTGCCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS GCA 90 bp | ACCGCAAGGGCGCCAGGCACACAGTGGGTTTGCGACTGTGGTATCTaGCTCTCCCACGGGAGGCAGACCCCATCACCAATTTCTCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: TARAPGTQWVCDCGI*LSHGRQTPSPISLC Trigger: ACAGAGAGAAATTGGTGATGGGGTCTGCCTCCCGTGGGAGAGGCAGATACCACAGTCGCAAACCCACTGTGTGCCTGGCGCCCTTGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS GCA 90 bp | CAAAAATCTGGGATGACCGCAAGGGCGCCAGGCACACAGTGGGTTTaGGACTGTGGTATCTGCCTCTCCCACGGGAGGCAGACCCCATCA | + |
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Preference number: 5 (lower is better) Translates to: QKSGMTARAPGTQWV*DCGICLSHGRQTPS Trigger: TGATGGGGTCTGCCTCCCGTGGGAGAGGCAGATACCACAGTCGCAAACCCACTGTGTGCCTGGCGCCCTTGCGGTCATCCCAGATTTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS CCA 90 bp | CACACAGCAACCATCCACCATGCCTGCATGCAGGTGGCCTCTGGGTaGAACAGAGGGATGTGGGCAAAAATCTGGGATGACCGCAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: HTATIHHACMQVASG*NRGMWAKIWDDRKG Trigger: GCCCTTGCGGTCATCCCAGATTTTTGCCCACATCCCTCTGTTCCACCCAGAGGCCACCTGCATGCAGGCATGGTGGATGGTTGCTGTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000556987.1 ENST00000665068.1 ENST00000670271.1 |
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| CDS TCA 90 bp | CCCCCAGCCCATGGCAGGTTGGAGACATCTGAAAAAGGTAGCAAATaGGTCCATGAGTGGCTGTGTGGGAATGAGATGGACTGGGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PPAHGRLETSEKGSK*VHEWLCGNEMDWVL Trigger: CAAGACCCAGTCCATCTCATTCCCACACAGCCACTCATGGACTCATTTGCTACCTTTTTCAGATGTCTCCAACCTGCCATGGGCTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000665068.1 |
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| CDS CCA 72 bp | GTGGGCTGTGGAGGGGCTGAGATGCTTGTGGACACCTaGGGCAGCGGCTGTGGGCTGTGGTCTCCCGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VGCGGAEMLVDT*GSGCGLWSPGL Trigger: CAGCCCGGGAGACCACAGCCCACAGCCGCTGCCCCAGGTGTCCACAAGCATCTCAGCCCCTCCACAGCCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556987.1 ENST00000665068.1 ENST00000670271.1 |
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| CDS CCA 72 bp | GGAGATGCGTGGGCTGTGGAGGGGCTGAGATGCTTGTaGACACCTGGGGCAGCGGCTGTGGGCTGTGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GDAWAVEGLRCL*TPGAAAVGCGL Trigger: GAGACCACAGCCCACAGCCGCTGCCCCAGGTGTCCACAAGCATCTCAGCCCCTCCACAGCCCACGCATCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000556987.1 ENST00000665068.1 ENST00000670271.1 |
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| CDS GCA 72 bp | GGGATGACCGCAAGGGCGCCAGGCACACAGTGGGTTTaGGACTGTGGTATCTGCCTCTCCCACGGGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GMTARAPGTQWV*DCGICLSHGRQ Trigger: CTGCCTCCCGTGGGAGAGGCAGATACCACAGTCGCAAACCCACTGTGTGCCTGGCGCCCTTGCGGTCATCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS CCA 72 bp | CGCAAGGGCGCCAGGCACACAGTGGGTTTGCGACTGTaGTATCTGCCTCTCCCACGGGAGGCAGACCCCATC | + |
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Preference number: 6 (lower is better) Translates to: RKGARHTVGLRL*YLPLPREADPI Trigger: GATGGGGTCTGCCTCCCGTGGGAGAGGCAGATACCACAGTCGCAAACCCACTGTGTGCCTGGCGCCCTTGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS CCA 72 bp | GGAGCTGGGCCTGCTTCCGAGGTTGATGGTCCCTCCTaGTTAACTCCGTGGCCAGCAAGAGGTCCCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GAGPASEVDGPS*LTPWPARGPRR Trigger: CCTCCTGGGACCTCTTGCTGGCCACGGAGTTAACCAGGAGGGACCATCAACCTCGGAAGCAGGCCCAGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS CAA 72 bp | TGGGATGACCGCAAGGGCGCCAGGCACACAGTGGGTTaGCGACTGTGGTATCTGCCTCTCCCACGGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: WDDRKGARHTVG*RLWYLPLPREA Trigger: TGCCTCCCGTGGGAGAGGCAGATACCACAGTCGCAAACCCACTGTGTGCCTGGCGCCCTTGCGGTCATCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS CCA 72 bp | CATGGAGCTGGGCCTTCCGAGGTTGATGGTCCCTCCTaGTTAACTCCGTGGCCAGCAAGAGGTCCCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: HGAGPSEVDGPS*LTPWPARGPRR Trigger: CCTCCTGGGACCTCTTGCTGGCCACGGAGTTAACCAGGAGGGACCATCAACCTCGGAAGGCCCAGCTCCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556987.1 |
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| CDS CCA 72 bp | TCCCGGGCTGTGCAGGTCAGGAGGTCAGGAGGTCTCTaGAGAGAGGCATCATCATGGAGCTGGGCCTTCCGA | + |
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Preference number: 6 (lower is better) Translates to: SRAVQVRRSGGL*REASSWSWAFR Trigger: TCGGAAGGCCCAGCTCCATGATGATGCCTCTCTCCAGAGACCTCCTGACCTCCTGACCTGCACAGCCCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556987.1 |
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| CDS CCA 72 bp | TCCCGGGCTGTGCAGGTCAGGAGGTCAGGAGGTCTCTaGAGAGAGGCATCATCATGGAGCTGGGCCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SRAVQVRRSGGL*REASSWSWACF Trigger: GAAGCAGGCCCAGCTCCATGATGATGCCTCTCTCCAGAGACCTCCTGACCTCCTGACCTGCACAGCCCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS CAA 90 bp | GCAAAAATCTGGGATGACCGCAAGGGCGCCAGGCACACAGTGGGTTaGCGACTGTGGTATCTGCCTCTCCCACGGGAGGCAGACCCCATC | + |
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Preference number: 6 (lower is better) Translates to: AKIWDDRKGARHTVG*RLWYLPLPREADPI Trigger: GATGGGGTCTGCCTCCCGTGGGAGAGGCAGATACCACAGTCGCAAACCCACTGTGTGCCTGGCGCCCTTGCGGTCATCCCAGATTTTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS GCA 72 bp | CAGGAGGCCATCACTGCACACAGCAACCATCCACCATaGCTGCATGCAGGTGGCCTCTGGGTGGAACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: QEAITAHSNHPP*LHAGGLWVEQR Trigger: CCTCTGTTCCACCCAGAGGCCACCTGCATGCAGGCATGGTGGATGGTTGCTGTGTGCAGTGATGGCCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000556987.1 ENST00000665068.1 ENST00000670271.1 |
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| CDS GCA 72 bp | GCGCCAGGCACACAGTGGGTTTGCGACTGTGGTATCTaGCTCTCCCACGGGAGGCAGACCCCATCACCAATT | + |
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Preference number: 6 (lower is better) Translates to: APGTQWVCDCGI*LSHGRQTPSPI Trigger: AATTGGTGATGGGGTCTGCCTCCCGTGGGAGAGGCAGATACCACAGTCGCAAACCCACTGTGTGCCTGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS CCA 72 bp | CCTTCCGAGGTTGATGGTCCCTCCTGGTTAACTCCGTaGCCAGCAAGAGGTCCCAGGAGGCCATCACTGCAC | + |
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Preference number: 6 (lower is better) Translates to: PSEVDGPSWLTP*PARGPRRPSLH Trigger: GTGCAGTGATGGCCTCCTGGGACCTCTTGCTGGCCACGGAGTTAACCAGGAGGGACCATCAACCTCGGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556987.1 |
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| CDS CCA 72 bp | AAATCTGGGATGACCGCAAGGGCGCCAGGCACACAGTaGGTTTGCGACTGTGGTATCTGCCTCTCCCACGGG | + |
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Preference number: 6 (lower is better) Translates to: KSGMTARAPGTQ*VCDCGICLSHG Trigger: CCCGTGGGAGAGGCAGATACCACAGTCGCAAACCCACTGTGTGCCTGGCGCCCTTGCGGTCATCCCAGATTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS CCA 72 bp | GCTTCCGAGGTTGATGGTCCCTCCTGGTTAACTCCGTaGCCAGCAAGAGGTCCCAGGAGGCCATCACTGCAC | + |
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Preference number: 6 (lower is better) Translates to: ASEVDGPSWLTP*PARGPRRPSLH Trigger: GTGCAGTGATGGCCTCCTGGGACCTCTTGCTGGCCACGGAGTTAACCAGGAGGGACCATCAACCTCGGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665068.1 ENST00000670271.1 |
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| CDS CAA 90 bp | GCTAAGTTTCCCTTTCAGTTTAAAGCACGGCATTTAATTCAGACATaGTCCTTCACTCCCCATGAGCCAATGAAAGAGGAGATGCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: AKFPFQFKARHLIQT*SFTPHEPMKEEMRG Trigger: CCCACGCATCTCCTCTTTCATTGGCTCATGGGGAGTGAAGGACAATGTCTGAATTAAATGCCGTGCTTTAAACTGAAAGGGAAACTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556987.1 ENST00000665068.1 ENST00000670271.1 |
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