Pregenerated sensors for LINC00523 (Homo sapiens)
Ensembl gene IDs: ENSG00000196273Ensembl transcript IDs: ENST00000360899.2, ENST00000553367.6, ENST00000553623.1, ENST00000554195.1, ENST00000556308.1, ENST00000556697.1, ENST00000655680.1, ENST00000656919.1, ENST00000663191.1, ENST00000671653.1
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGGCAGGGCCCCCAGCTGCTCTAGGGAGCCCCTCTGCTGCTGTCTaGTCTGCTCAGCACCTGGGATGCCAGGATGAGACTCTCTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: QAGPPAALGSPSAAV*SAQHLGCQDETLCL Trigger: GAGGCAGAGAGTCTCATCCTGGCATCCCAGGTGCTGAGCAGAGCAGACAGCAGCAGAGGGGCTCCCTAGAGCAGCTGGGGGCCCTGCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 90 bp | ATGGCGCTCCATCCCAGGGCCTCTGGACCCGGGGAGGATAGAGCTTaGAGCATCCTCCTAAGGGCTCACTGCTGGCTGAGGGCTGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: MALHPRASGPGEDRA*SILLRAHCWLRAVP Trigger: GGGAACAGCCCTCAGCCAGCAGTGAGCCCTTAGGAGGATGCTCCAAGCTCTATCCTCCCCGGGTCCAGAGGCCCTGGGATGGAGCGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 90 bp | CCCTCAGTCCCCCTGGCTGGAGGTTCGGTTTCCGTTGGACAGCGCTaGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCTGGTGGCCGAA | + |
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Preference number: 5 (lower is better) Translates to: PSVPLAGGSVSVGQR*SRVQAVPTAPLVAE Trigger: TTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACCTCCAGCCAGGGGGACTGAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000556308.1 ENST00000655680.1 |
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| CDS CCA 90 bp | GGGAAGCCTTCCCTCAGTCCCCCTGGCTGGAGGTTCGGTTTCCGTTaGACAGCGCTGGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: GKPSLSPPGWRFGFR*TALVSSSSCANSAP Trigger: AGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACCTCCAGCCAGGGGGACTGAGGGAAGGCTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000556308.1 ENST00000655680.1 |
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| CDS CCA 90 bp | GGGGCCAGCCCAGGGAGCTTCATCAAGTTGTCACTGCTTCCACAATaGCGCTCCATCCCAGGGCCTCTGGACCCGGGGAGGATAGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: GASPGSFIKLSLLPQ*RSIPGPLDPGRIEL Trigger: AAGCTCTATCCTCCCCGGGTCCAGAGGCCCTGGGATGGAGCGCCATTGTGGAAGCAGTGACAACTTGATGAAGCTCCCTGGGCTGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 90 bp | TCCCCAAGCTCACGTTCCTCACGTTCGGTTTCCGTTGGACAGCGCTaGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCTGGTGGCCGAA | + |
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Preference number: 5 (lower is better) Translates to: SPSSRSSRSVSVGQR*SRVQAVPTAPLVAE Trigger: TTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGTGAGGAACGTGAGCTTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000553367.6 ENST00000671653.1 |
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| CDS CCA 90 bp | CACTGGAACCTCCTGATGGGGCAGAAGGTTCAGGCTCACCTGAGCTaGGACCTGCCTGTGCTCCTAAGGGCATGGCCTTTCCGGCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: HWNLLMGQKVQAHLS*DLPVLLRAWPFRQL Trigger: CAACTGCCGGAAAGGCCATGCCCTTAGGAGCACAGGCAGGTCCCAGCTCAGGTGAGCCTGAACCTTCTGCCCCATCAGGAGGTTCCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556697.1 |
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| CDS CCA 90 bp | CACACAGCAGACCTCTTGATCCGTTCGGTTTCCGTTGGACAGCGCTaGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCTGGTGGCCGAA | + |
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Preference number: 5 (lower is better) Translates to: HTADLLIRSVSVGQR*SRVQAVPTAPLVAE Trigger: TTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGGATCAAGAGGTCTGCTGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663191.1 |
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| CDS CCA 90 bp | AGCTTTCTGAGCTCTGTGGCACAAGAGGGCAGGAGGTGCTTGGAGTaGTCTCGAGTGAGGGGGCCTGTGGTATCTACTGCACCCACCTCA | + |
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Preference number: 5 (lower is better) Translates to: SFLSSVAQEGRRCLE*SRVRGPVVSTAPTS Trigger: TGAGGTGGGTGCAGTAGATACCACAGGCCCCCTCACTCGAGACCACTCCAAGCACCTCCTGCCCTCTTGTGCCACAGAGCTCAGAAAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS TCA 90 bp | TTGGCTCCAAGTCACTTTGGAGAGACATTAGCATCCAGGCTCCTCTaGCCCTCGAACGGGAGTTGCTTTTTGCGCCTCCCGGCAGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LAPSHFGETLASRLL*PSNGSCFLRLPAGS Trigger: GCTCCCTGCCGGGAGGCGCAAAAAGCAACTCCCGTTCGAGGGTCAGAGGAGCCTGGATGCTAATGTCTCTCCAAAGTGACTTGGAGCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000360899.2 ENST00000553623.1 ENST00000556697.1 |
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| CDS GCA 90 bp | GGACCCGGGGAGGATAGAGCTTGGAGCATCCTCCTAAGGGCTCACTaGTGGCTGAGGGCTGTTCCCAAGAGGACAGGATCTAATTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GPGEDRAWSILLRAH*WLRAVPKRTGSNSL Trigger: CAGAGAATTAGATCCTGTCCTCTTGGGAACAGCCCTCAGCCAGCAGTGAGCCCTTAGGAGGATGCTCCAAGCTCTATCCTCCCCGGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 90 bp | CACGTTCGGTTTCCGTTGGACAGCGCTGGTCTCGAGTTCAAGCTGTaGCAACAGCGCCCCTGGTGGCCGAAGTGGGTAAATTCATCTGAC | + |
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Preference number: 5 (lower is better) Translates to: HVRFPLDSAGLEFKL*QQRPWWPKWVNSSD Trigger: GTCAGATGAATTTACCCACTTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553367.6 ENST00000671653.1 |
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| CDS GCA 90 bp | GAGGTTCGGTTTCCGTTGGACAGCGCTGGTCTCGAGTTCAAGCTGTaGCAACAGCGCCCCTGGTGGCCGAAGTGGGTAAATTCATCTGAC | + |
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Preference number: 5 (lower is better) Translates to: EVRFPLDSAGLEFKL*QQRPWWPKWVNSSD Trigger: GTCAGATGAATTTACCCACTTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000556308.1 ENST00000655680.1 |
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| CDS GCA 90 bp | TCCGTTCGGTTTCCGTTGGACAGCGCTGGTCTCGAGTTCAAGCTGTaGCAACAGCGCCCCTGGTGGCCGAAGTGGGTAAATTCATCTGAC | + |
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Preference number: 5 (lower is better) Translates to: SVRFPLDSAGLEFKL*QQRPWWPKWVNSSD Trigger: GTCAGATGAATTTACCCACTTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663191.1 |
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| CDS CCA 90 bp | GCTCCTAAGGGCATGGCCTTTCCGGCAGTTGGCTCCAAGTCACTTTaGAGAGACATTAGCATCCAGGCTCCTCTGACCCTCGAACGGGAG | + |
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Preference number: 5 (lower is better) Translates to: APKGMAFPAVGSKSL*RDISIQAPLTLERE Trigger: CTCCCGTTCGAGGGTCAGAGGAGCCTGGATGCTAATGTCTCTCCAAAGTGACTTGGAGCCAACTGCCGGAAAGGCCATGCCCTTAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000360899.2 ENST00000553623.1 ENST00000556697.1 |
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| CDS CCA 90 bp | CCCGGGGAGGATAGAGCTTGGAGCATCCTCCTAAGGGCTCACTGCTaGCTGAGGGCTGTTCCCAAGAGGACAGGATCTAATTCTCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: PGEDRAWSILLRAHC*LRAVPKRTGSNSLA Trigger: TGCCAGAGAATTAGATCCTGTCCTCTTGGGAACAGCCCTCAGCCAGCAGTGAGCCCTTAGGAGGATGCTCCAAGCTCTATCCTCCCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 90 bp | GACATTTCGGGCAGGGTGCCCAGCCACCCCTTCTTAATAACCGTATaGACATCCATGTTCTGCCCAGACCCTCTGCTGCCCAGGGAGACT | + |
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Preference number: 5 (lower is better) Translates to: DISGRVPSHPFLITV*TSMFCPDPLLPRET Trigger: AGTCTCCCTGGGCAGCAGAGGGTCTGGGCAGAACATGGATGTCCATACGGTTATTAAGAAGGGGTGGCTGGGCACCCTGCCCGAAATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553367.6 |
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| CDS TCA 90 bp | AGGACCTTGGCCACAGGACCTCTGGGGAACATTGCTTTAGCTTTCTaGGCTCTGTGGCACAAGAGGGCAGGAGGTGCTTGGAGTGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: RTLATGPLGNIALAF*ALWHKRAGGAWSGL Trigger: GAGACCACTCCAAGCACCTCCTGCCCTCTTGTGCCACAGAGCTCAGAAAGCTAAAGCAATGTTCCCCAGAGGTCCTGTGGCCAAGGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS TCA 90 bp | GCTGTGCCAACAGCGCCCCTGGTGGCCGAAGTGGGTAAATTCATCTaGCCAAGGGCCTGTTTTTCTACTGGAGACCCTGCGCAGGTTACT | + |
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Preference number: 5 (lower is better) Translates to: AVPTAPLVAEVGKFI*PRACFSTGDPAQVT Trigger: AGTAACCTGCGCAGGGTCTCCAGTAGAAAAACAGGCCCTTGGTCAGATGAATTTACCCACTTCGGCCACCAGGGGCGCTGTTGGCACAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000553367.6 ENST00000554195.1 ENST00000556308.1 ENST00000655680.1 ENST00000656919.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 90 bp | AGTTCTAGGAGAGTCACATCCTTACCTCCCTTGTTCATCGAGGTGTaGCCAGTACCTATGCCCATGCTCGGCACACAGTGGGGCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SSRRVTSLPPLFIEV*PVPMPMLGTQWGLR Trigger: CCTGAGGCCCCACTGTGTGCCGAGCATGGGCATAGGTACTGGGCACACCTCGATGAACAAGGGAGGTAAGGATGTGACTCTCCTAGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 90 bp | CCATGCTCGCTGGAGGATGGTTTTCTGACATGGCCTTTCTTTCCCTaGTCAGTCTTGCTCAGAAGCTTCTGCAGGGGTCACCCAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: PCSLEDGFLTWPFFP*SVLLRSFCRGHPGP Trigger: TGGGCCTGGGTGACCCCTGCAGAAGCTTCTGAGCAAGACTGAGCAGGGAAAGAAAGGCCATGTCAGAAAACCATCCTCCAGCGAGCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 90 bp | TACGTTCGGTTTCCGTTGGACAGCGCTGGTCTCGAGTTCAAGCTGTaGCAACAGCGCCCCTGGTGGCCGAAGTGGGTAAATTCATCTGAC | + |
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Preference number: 5 (lower is better) Translates to: YVRFPLDSAGLEFKL*QQRPWWPKWVNSSD Trigger: GTCAGATGAATTTACCCACTTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554195.1 ENST00000656919.1 |
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| CDS CCA 90 bp | CACGTTCCTCACCTGAGCTGGGACCTGCCTGTGCTCCTAAGGGCATaGCCTTTCCGGCAGTTGGCTCCAAGTCACTTTGGAGAGACATTA | + |
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Preference number: 5 (lower is better) Translates to: HVPHLSWDLPVLLRA*PFRQLAPSHFGETL Trigger: TAATGTCTCTCCAAAGTGACTTGGAGCCAACTGCCGGAAAGGCCATGCCCTTAGGAGCACAGGCAGGTCCCAGCTCAGGTGAGGAACGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553623.1 |
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| CDS CCA 90 bp | GTTCAGGCTCACCTGAGCTGGGACCTGCCTGTGCTCCTAAGGGCATaGCCTTTCCGGCAGTTGGCTCCAAGTCACTTTGGAGAGACATTA | + |
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Preference number: 5 (lower is better) Translates to: VQAHLSWDLPVLLRA*PFRQLAPSHFGETL Trigger: TAATGTCTCTCCAAAGTGACTTGGAGCCAACTGCCGGAAAGGCCATGCCCTTAGGAGCACAGGCAGGTCCCAGCTCAGGTGAGCCTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556697.1 |
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| CDS TCA 90 bp | CTGAGGGCTGTTCCCAAGAGGACAGGATCTAATTCTCTGGCACTTTaGCCTGCTGTGTGCACAAGAGCACCTCCGGGAGGCATCGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: LRAVPKRTGSNSLAL*PAVCTRAPPGGIVC Trigger: ACACACGATGCCTCCCGGAGGTGCTCTTGTGCACACAGCAGGTCAAAGTGCCAGAGAATTAGATCCTGTCCTCTTGGGAACAGCCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 90 bp | TCACATCCTTACCTCCCTTGTTCATCGAGGTGTGCCCAGTACCTATaGCCATGCTCGGCACACAGTGGGGCCTCAGGAAGTATTTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SHPYLPCSSRCAQYL*PCSAHSGASGSICW Trigger: CCAGCAAATACTTCCTGAGGCCCCACTGTGTGCCGAGCATGGGCATAGGTACTGGGCACACCTCGATGAACAAGGGAGGTAAGGATGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 90 bp | GGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCTGGTGGCCGAAGTaGGTAAATTCATCTGACCAAGGGCCTGTTTTTCTACTGGAGACC | + |
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Preference number: 5 (lower is better) Translates to: GLEFKLCQQRPWWPK*VNSSDQGPVFLLET Trigger: GGTCTCCAGTAGAAAAACAGGCCCTTGGTCAGATGAATTTACCCACTTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000553367.6 ENST00000554195.1 ENST00000556308.1 ENST00000655680.1 ENST00000656919.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 90 bp | GACAGCGCTGGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCTGGTaGCCGAAGTGGGTAAATTCATCTGACCAAGGGCCTGTTTTTCTA | + |
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Preference number: 5 (lower is better) Translates to: DSAGLEFKLCQQRPW*PKWVNSSDQGPVFL Trigger: TAGAAAAACAGGCCCTTGGTCAGATGAATTTACCCACTTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000553367.6 ENST00000554195.1 ENST00000556308.1 ENST00000655680.1 ENST00000656919.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 90 bp | TTGGACAGCGCTGGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCTaGTGGCCGAAGTGGGTAAATTCATCTGACCAAGGGCCTGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: LDSAGLEFKLCQQRP*WPKWVNSSDQGPVF Trigger: AAAAACAGGCCCTTGGTCAGATGAATTTACCCACTTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000553367.6 ENST00000554195.1 ENST00000556308.1 ENST00000655680.1 ENST00000656919.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 90 bp | TGGGATGCCAGGATGAGACTCTCTGCCTCCATGCTCGCTGGAGGATaGTTTTCTGACATGGCCTTTCTTTCCCTGCTCAGTCTTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: WDARMRLSASMLAGG*FSDMAFLSLLSLAQ Trigger: CTGAGCAAGACTGAGCAGGGAAAGAAAGGCCATGTCAGAAAACCATCCTCCAGCGAGCATGGAGGCAGAGAGTCTCATCCTGGCATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 90 bp | TTTCCTGGGCTCCTTTCTCCTCTGTGCCTCTGTGGCAGAGAGAGCTaGCTTTGTCGTAAAATAATTTCGGGCGCTTGCCTCTCTCTCACG | + |
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Preference number: 5 (lower is better) Translates to: FPGLLSPLCLCGRES*LCRKIISGACLSLT Trigger: CGTGAGAGAGAGGCAAGCGCCCGAAATTATTTTACGACAAAGGCAGCTCTCTCTGCCACAGAGGCACAGAGGAGAAAGGAGCCCAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360899.2 ENST00000553623.1 ENST00000556697.1 |
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| CDS TCA 90 bp | TGCCCATGCTCGGCACACAGTGGGGCCTCAGGAAGTATTTGCTGGTaGGTTATTGATGAACCCATCTCTGGGGTTGCTGTGGATTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: CPCSAHSGASGSICW*VIDEPISGVAVDFS Trigger: TGAGAAATCCACAGCAACCCCAGAGATGGGTTCATCAATAACTCACCAGCAAATACTTCCTGAGGCCCCACTGTGTGCCGAGCATGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS TCA 90 bp | CAGGATGAGACTCTCTGCCTCCATGCTCGCTGGAGGATGGTTTTCTaGCATGGCCTTTCTTTCCCTGCTCAGTCTTGCTCAGAAGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: QDETLCLHARWRMVF*HGLSFPAQSCSEAS Trigger: AGAAGCTTCTGAGCAAGACTGAGCAGGGAAAGAAAGGCCATGTCAGAAAACCATCCTCCAGCGAGCATGGAGGCAGAGAGTCTCATCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 90 bp | TGTGGCAGAGAGAGCTGCCTTTGTCGTAAAATAATTTCGGGCGCTTaGCTCTCTCTCACGCACAACTGTTCAAGGCTCTTTCCTCCGACT | + |
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Preference number: 5 (lower is better) Translates to: CGRESCLCRKIISGA*LSLTHNCSRLFPPT Trigger: AGTCGGAGGAAAGAGCCTTGAACAGTTGTGCGTGAGAGAGAGGCAAGCGCCCGAAATTATTTTACGACAAAGGCAGCTCTCTCTGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360899.2 ENST00000553623.1 ENST00000556697.1 |
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| CDS GCA 90 bp | TGCTGTGGATTTCTCATGGCAGTGTGCACGAAGGGCCTAGCAAAATaGCCAGCGCCTAGTAGGTGCTCAATAAAATGCCAGCCCAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: CCGFLMAVCTKGLAK*PAPSRCSIKCQPRK Trigger: TTTTCTGGGCTGGCATTTTATTGAGCACCTACTAGGCGCTGGGCATTTTGCTAGGCCCTTCGTGCACACTGCCATGAGAAATCCACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 90 bp | TTTCTTGTGTACTTTTTAGAAATGTGGCTTACGTTCGGTTTCCGTTaGACAGCGCTGGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: FLVYFLEMWLTFGFR*TALVSSSSCANSAP Trigger: AGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGTAAGCCACATTTCTAAAAAGTACACAAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000554195.1 ENST00000656919.1 |
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| CDS TCA 90 bp | TCTCTGAGGCCAGCCCAAGACACAGTTCAACCCGTGTTTGTTGAATaGATAAATGACCTACAATGGGGCCTTACCCTTTCACACCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SLRPAQDTVQPVFVE*INDLQWGLTLSHPG Trigger: TCCTGGGTGTGAAAGGGTAAGGCCCCATTGTAGGTCATTTATTCATTCAACAAACACGGGTTGAACTGTGTCTTGGGCTGGCCTCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556697.1 |
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| CDS GCA 90 bp | TTCCCAGTCTTTATGTATCTGAGTTTCTCCTCGTCTTTCAGGTTCTaGTTGGATTTCAGCTTCTCAGAGAGGCTGTCACGGCCCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: FPVFMYLSFSSSFRF*LDFSFSERLSRPSL Trigger: GAGAGAGGGCCGTGACAGCCTCTCTGAGAAGCTGAAATCCAAGCAGAACCTGAAAGACGAGGAGAAACTCAGATACATAAAGACTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS TCA 90 bp | TTGCCTCTCTCTCACGCACAACTGTTCAAGGCTCTTTCCTCCGACTaGCTTTCATGTCGCAAAACTCTATTAAGCTTTCATCTGCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LPLSHAQLFKALSSD*LSCRKTLLSFHLPG Trigger: CCCAGGCAGATGAAAGCTTAATAGAGTTTTGCGACATGAAAGTCAGTCGGAGGAAAGAGCCTTGAACAGTTGTGCGTGAGAGAGAGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360899.2 ENST00000556697.1 |
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| CDS CCA 90 bp | AAGCTCCAGAAGTGTGTTGGAAGGCAGGGTCGATATTGCCGGCTTTaGGGGGATGAGTCGATAACGATTGAAAGTGAGCAAAATATTCTC | + |
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Preference number: 5 (lower is better) Translates to: KLQKCVGRQGRYCRL*GDESITIESEQNIL Trigger: GAGAATATTTTGCTCACTTTCAATCGTTATCGACTCATCCCCCCAAAGCCGGCAATATCGACCCTGCCTTCCAACACACTTCTGGAGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556308.1 |
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| CDS GCA 90 bp | CTTCTTGCTATAAAGCATAGTTCTCCAAACATGCTCTCATACACGTaGCCCAAATGCACAAAACAGATCAAAATGGCCCAGGAGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LLAIKHSSPNMLSYT*PKCTKQIKMAQEGW Trigger: CCAGCCCTCCTGGGCCATTTTGATCTGTTTTGTGCATTTGGGGCACGTGTATGAGAGCATGTTTGGAGAACTATGCTTTATAGCAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000553367.6 ENST00000553623.1 ENST00000671653.1 |
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| CDS CCA 90 bp | GCAAAATATTCTCCTTTCTCTCCCTCAACATGCAGCTTCCTCGTCTaGAACGCTCTCCTTGCTGATTGTCAAAATGTTCTTCACTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: AKYSPFSPSTCSFLV*NALLADCQNVLHSW Trigger: CCAGGAGTGAAGAACATTTTGACAATCAGCAAGGAGAGCGTTCCAGACGAGGAAGCTGCATGTTGAGGGAGAGAAAGGAGAATATTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556308.1 |
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| CDS TCA 90 bp | GCACTGTTCCCTCTACTTGAATGCTTTTCCCAGTCTTTATGTATCTaGGTTTCTCCTCGTCTTTCAGGTTCTGCTTGGATTTCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALFPLLECFSQSLCI*VSPRLSGSAWISAS Trigger: AGAAGCTGAAATCCAAGCAGAACCTGAAAGACGAGGAGAAACTCAGATACATAAAGACTGGGAAAAGCATTCAAGTAGAGGGAACAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
||
| CDS GCA 90 bp | CTCTCATTCGACCTCTCTCTGTTACCATCTAGCACATCATCTGATTaGATTTTCTCCAGAATGATCTTGCTTGTTTCCATGTTTATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSFDLSLLPSSTSSD*IFSRMILLVSMFIL Trigger: GAGAATAAACATGGAAACAAGCAAGATCATTCTGGAGAAAATGCAATCAGATGATGTGCTAGATGGTAACAGAGAGAGGTCGAATGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
||
| CDS TCA 72 bp | TCCCGGGGCCCAGTTGCCTCCTGGAACGTGAGTGGGTaGCCGAGGACATTTCGGGCAGGGTGCCCAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SRGPVASWNVSG*PRTFRAGCPAT Trigger: GGTGGCTGGGCACCCTGCCCGAAATGTCCTCGGTCACCCACTCACGTTCCAGGAGGCAACTGGGCCCCGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553367.6 |
||
| CDS GCA 72 bp | CCAGGCTCCTCTGACCCTCGAACGGGAGTTGCTTTTTaGGCCTCCCGGCAGGGAGCCCCCAGTGTCCTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PGSSDPRTGVAF*ASRQGAPSVLV Trigger: GACAAGGACACTGGGGGCTCCCTGCCGGGAGGCGCAAAAAGCAACTCCCGTTCGAGGGTCAGAGGAGCCTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000360899.2 ENST00000553623.1 ENST00000556697.1 |
||
| CDS GCA 72 bp | CCGTATGGACATCCATGTTCTGCCCAGACCCTCTGCTaGCCAGGGAGACTCCCGGCCCTGCATGTGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PYGHPCSAQTLC*PGRLPALHVGQ Trigger: CTGGCCCACATGCAGGGCCGGGAGTCTCCCTGGGCAGCAGAGGGTCTGGGCAGAACATGGATGTCCATACGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553367.6 |
||
| CDS GCA 72 bp | CCCCCAGCTGCTCTAGGGAGCCCCTCTGCTGCTGTCTaGTCTGCTCAGCACCTGGGATGCCAGGATGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: PPAALGSPSAAV*SAQHLGCQDET Trigger: AGTCTCATCCTGGCATCCCAGGTGCTGAGCAGAGCAGACAGCAGCAGAGGGGCTCCCTAGAGCAGCTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
||
| CDS CCA 72 bp | CATCCCAGGGCCTCTGGACCCGGGGAGGATAGAGCTTaGAGCATCCTCCTAAGGGCTCACTGCTGGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HPRASGPGEDRA*SILLRAHCWLR Trigger: CCTCAGCCAGCAGTGAGCCCTTAGGAGGATGCTCCAAGCTCTATCCTCCCCGGGTCCAGAGGCCCTGGGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
||
| CDS CCA 72 bp | CCCCTGGCTGGAGGTTCGGTTTCCGTTGGACAGCGCTaGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PLAGGSVSVGQR*SRVQAVPTAPL Trigger: CAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACCTCCAGCCAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000556308.1 ENST00000655680.1 |
||
| CDS CAA 90 bp | TGGGAAGCCTTCCCTCAGTCCCCCTGGCTGGAGGTTCGGTTTCCGTaGGACAGCGCTGGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: WEAFPQSPWLEVRFP*DSAGLEFKLCQQRP Trigger: GGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACCTCCAGCCAGGGGGACTGAGGGAAGGCTTCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000556308.1 ENST00000655680.1 |
||
| CDS CCA 72 bp | CCAGGGAGCTTCATCAAGTTGTCACTGCTTCCACAATaGCGCTCCATCCCAGGGCCTCTGGACCCGGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGSFIKLSLLPQ*RSIPGPLDPGR Trigger: CCTCCCCGGGTCCAGAGGCCCTGGGATGGAGCGCCATTGTGGAAGCAGTGACAACTTGATGAAGCTCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
||
| CDS CAA 72 bp | ATTAGCATCCAGGCTCCTCTGACCCTCGAACGGGAGTaGCTTTTTGCGCCTCCCGGCAGGGAGCCCCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ISIQAPLTLERE*LFAPPGREPPV Trigger: CACTGGGGGCTCCCTGCCGGGAGGCGCAAAAAGCAACTCCCGTTCGAGGGTCAGAGGAGCCTGGATGCTAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000360899.2 ENST00000553623.1 ENST00000556697.1 |
||
| CDS GCA 72 bp | AAGGGGCCAGCCCAGGGAGCTTCATCAAGTTGTCACTaGTTCCACAATGGCGCTCCATCCCAGGGCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KGPAQGASSSCH*FHNGAPSQGLW Trigger: CCAGAGGCCCTGGGATGGAGCGCCATTGTGGAAGCAGTGACAACTTGATGAAGCTCCCTGGGCTGGCCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
||
| CDS CCA 72 bp | TCCCTCAGTCCCCCTGGCTGGAGGTTCGGTTTCCGTTaGACAGCGCTGGTCTCGAGTTCAAGCTGTGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLSPPGWRFGFR*TALVSSSSCAN Trigger: GTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACCTCCAGCCAGGGGGACTGAGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000556308.1 ENST00000655680.1 |
||
| CDS CAA 90 bp | TGGAGAGACATTAGCATCCAGGCTCCTCTGACCCTCGAACGGGAGTaGCTTTTTGCGCCTCCCGGCAGGGAGCCCCCAGTGTCCTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: WRDISIQAPLTLERE*LFAPPGREPPVSLS Trigger: AGACAAGGACACTGGGGGCTCCCTGCCGGGAGGCGCAAAAAGCAACTCCCGTTCGAGGGTCAGAGGAGCCTGGATGCTAATGTCTCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000360899.2 ENST00000553623.1 ENST00000556697.1 |
||
| CDS TCA 72 bp | TGCTGTCTGCTCTGCTCAGCACCTGGGATGCCAGGATaGGACTCTCTGCCTCCATGCTCGCTGGAGGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: CCLLCSAPGMPG*DSLPPCSLEDG Trigger: ACCATCCTCCAGCGAGCATGGAGGCAGAGAGTCTCATCCTGGCATCCCAGGTGCTGAGCAGAGCAGACAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
||
| CDS GCA 72 bp | AGCTTTCTGAGCTCTGTGGCACAAGAGGGCAGGAGGTaGTTGGAGTGGTCTCGAGTGAGGGGGCCTGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SFLSSVAQEGRR*LEWSRVRGPVV Trigger: TACCACAGGCCCCCTCACTCGAGACCACTCCAAGCACCTCCTGCCCTCTTGTGCCACAGAGCTCAGAAAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
||
| CDS CCA 72 bp | TCCCTGAGCTGGGACCTGCCTGTGCTCCTAAGGGCATaGCCTTTCCGGCAGTTGGCTCCAAGTCACTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLSWDLPVLLRA*PFRQLAPSHFG Trigger: TCCAAAGTGACTTGGAGCCAACTGCCGGAAAGGCCATGCCCTTAGGAGCACAGGCAGGTCCCAGCTCAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360899.2 |
||
| CDS CCA 72 bp | AGCTCTGTGGCACAAGAGGGCAGGAGGTGCTTGGAGTaGTCTCGAGTGAGGGGGCCTGTGGTATCTACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSVAQEGRRCLE*SRVRGPVVSTA Trigger: TGCAGTAGATACCACAGGCCCCCTCACTCGAGACCACTCCAAGCACCTCCTGCCCTCTTGTGCCACAGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
||
| CDS CCA 72 bp | TCACGTTCCTCACGTTCGGTTTCCGTTGGACAGCGCTaGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRSSRSVSVGQR*SRVQAVPTAPL Trigger: CAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGTGAGGAACGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553367.6 ENST00000671653.1 |
||
| CDS CCA 72 bp | GGCAGGGTGCCCAGCCACCCCTTCTTAATAACCGTATaGACATCCATGTTCTGCCCAGACCCTCTGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRVPSHPFLITV*TSMFCPDPLLP Trigger: GGGCAGCAGAGGGTCTGGGCAGAACATGGATGTCCATACGGTTATTAAGAAGGGGTGGCTGGGCACCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553367.6 |
||
| CDS CCA 72 bp | CACCTGAGCTGGGACCTGCCTGTGCTCCTAAGGGCATaGCCTTTCCGGCAGTTGGCTCCAAGTCACTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HLSWDLPVLLRA*PFRQLAPSHFG Trigger: TCCAAAGTGACTTGGAGCCAACTGCCGGAAAGGCCATGCCCTTAGGAGCACAGGCAGGTCCCAGCTCAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553623.1 ENST00000556697.1 |
||
| CDS CCA 72 bp | GACCTCTTGATCCGTTCGGTTTCCGTTGGACAGCGCTaGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DLLIRSVSVGQR*SRVQAVPTAPL Trigger: CAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGGATCAAGAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663191.1 |
||
| CDS CAA 72 bp | AGAGAGGAAGGGGCCAGCCCAGGGAGCTTCATCAAGTaGTCACTGCTTCCACAATGGCGCTCCATCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: REEGASPGSFIK*SLLPQWRSIPG Trigger: CCCTGGGATGGAGCGCCATTGTGGAAGCAGTGACAACTTGATGAAGCTCCCTGGGCTGGCCCCTTCCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
||
| CDS CAA 72 bp | TTCCCTCAGTCCCCCTGGCTGGAGGTTCGGTTTCCGTaGGACAGCGCTGGTCTCGAGTTCAAGCTGTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FPQSPWLEVRFP*DSAGLEFKLCQ Trigger: TTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACCTCCAGCCAGGGGGACTGAGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000556308.1 ENST00000655680.1 |
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| CDS CAA 90 bp | AGCTGGGACCTGCCTGTGCTCCTAAGGGCATGGCCTTTCCGGCAGTaGGCTCCAAGTCACTTTGGAGAGACATTAGCATCCAGGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SWDLPVLLRAWPFRQ*APSHFGETLASRLL Trigger: GAGGAGCCTGGATGCTAATGTCTCTCCAAAGTGACTTGGAGCCAACTGCCGGAAAGGCCATGCCCTTAGGAGCACAGGCAGGTCCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000360899.2 ENST00000553623.1 ENST00000556697.1 |
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| CDS CAA 90 bp | TGCTTTAGCTTTCTGAGCTCTGTGGCACAAGAGGGCAGGAGGTGCTaGGAGTGGTCTCGAGTGAGGGGGCCTGTGGTATCTACTGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: CFSFLSSVAQEGRRC*EWSRVRGPVVSTAP Trigger: GGGTGCAGTAGATACCACAGGCCCCCTCACTCGAGACCACTCCAAGCACCTCCTGCCCTCTTGTGCCACAGAGCTCAGAAAGCTAAAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 72 bp | TACCTCCCTTGTTCATCGAGGTGTGCCCAGTACCTATaGCCATGCTCGGCACACAGTGGGGCCTCAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: YLPCSSRCAQYL*PCSAHSGASGS Trigger: ACTTCCTGAGGCCCCACTGTGTGCCGAGCATGGGCATAGGTACTGGGCACACCTCGATGAACAAGGGAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 72 bp | TTTCCGTTGGACAGCGCTGGTCTCGAGTTCAAGCTGTaGCAACAGCGCCCCTGGTGGCCGAAGTGGGTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: FPLDSAGLEFKL*QQRPWWPKWVN Trigger: ATTTACCCACTTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000553367.6 ENST00000554195.1 ENST00000556308.1 ENST00000655680.1 ENST00000656919.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 72 bp | GGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCTGGTaGCCGAAGTGGGTAAATTCATCTGACCAAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GLEFKLCQQRPW*PKWVNSSDQGP Trigger: AGGCCCTTGGTCAGATGAATTTACCCACTTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000553367.6 ENST00000554195.1 ENST00000556308.1 ENST00000655680.1 ENST00000656919.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 72 bp | GCTGGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCTaGTGGCCGAAGTGGGTAAATTCATCTGACCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGLEFKLCQQRP*WPKWVNSSDQG Trigger: CCCTTGGTCAGATGAATTTACCCACTTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000553367.6 ENST00000554195.1 ENST00000556308.1 ENST00000655680.1 ENST00000656919.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 72 bp | CTCCCCAAGCTCACGTTCCTCACGTTCGGTTTCCGTTaGACAGCGCTGGTCTCGAGTTCAAGCTGTGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPKLTFLTFGFR*TALVSSSSCAN Trigger: GTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGTGAGGAACGTGAGCTTGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553367.6 ENST00000671653.1 |
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| CDS CCA 72 bp | AGACCTCTTGATCCCTGGACCACAGCTTGTCACAGTTaGCCTGCATGCCAGACAGTGGCTCCTCGGGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: RPLDPWTTACHS*PACQTVAPRGN Trigger: ATTGCCCCGAGGAGCCACTGTCTGGCATGCAGGCCAACTGTGACAAGCTGTGGTCCAGGGATCAAGAGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556697.1 |
||
| CDS CAA 72 bp | CCTCCCCAAGCTCACGTTCCTCACGTTCGGTTTCCGTaGGACAGCGCTGGTCTCGAGTTCAAGCTGTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PPQAHVPHVRFP*DSAGLEFKLCQ Trigger: TTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGTGAGGAACGTGAGCTTGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553367.6 ENST00000671653.1 |
||
| CDS TCA 72 bp | GCCACAGGACCTCTGGGGAACATTGCTTTAGCTTTCTaGGCTCTGTGGCACAAGAGGGCAGGAGGTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: ATGPLGNIALAF*ALWHKRAGGAW Trigger: CCAAGCACCTCCTGCCCTCTTGTGCCACAGAGCTCAGAAAGCTAAAGCAATGTTCCCCAGAGGTCCTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS TCA 72 bp | ACAGCGCCCCTGGTGGCCGAAGTGGGTAAATTCATCTaGCCAAGGGCCTGTTTTTCTACTGGAGACCCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: TAPLVAEVGKFI*PRACFSTGDPA Trigger: CGCAGGGTCTCCAGTAGAAAAACAGGCCCTTGGTCAGATGAATTTACCCACTTCGGCCACCAGGGGCGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000553367.6 ENST00000554195.1 ENST00000556308.1 ENST00000655680.1 ENST00000656919.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 72 bp | CCTTGTTCATCGAGGTGTGCCCAGTACCTATGCCCATaGTCGGCACACAGTGGGGCCTCAGGAAGTATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PCSSRCAQYLCP*SAHSGASGSIC Trigger: GCAAATACTTCCTGAGGCCCCACTGTGTGCCGAGCATGGGCATAGGTACTGGGCACACCTCGATGAACAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 72 bp | GAGGATAGAGCTTGGAGCATCCTCCTAAGGGCTCACTaGTGGCTGAGGGCTGTTCCCAAGAGGACAGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: EDRAWSILLRAH*WLRAVPKRTGS Trigger: AGATCCTGTCCTCTTGGGAACAGCCCTCAGCCAGCAGTGAGCCCTTAGGAGGATGCTCCAAGCTCTATCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 72 bp | AAATGTGGCTTACGTTCGGTTTCCGTTGGACAGCGCTaGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KCGLRSVSVGQR*SRVQAVPTAPL Trigger: CAGGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGTAAGCCACATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000554195.1 ENST00000656919.1 |
||
| CDS TCA 72 bp | AGTCACTTTGGAGAGACATTAGCATCCAGGCTCCTCTaGCCCTCGAACGGGAGTTGCTTTTTGCGCCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SHFGETLASRLL*PSNGSCFLRLP Trigger: CGGGAGGCGCAAAAAGCAACTCCCGTTCGAGGGTCAGAGGAGCCTGGATGCTAATGTCTCTCCAAAGTGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000360899.2 ENST00000553623.1 ENST00000556697.1 |
||
| CDS TCA 72 bp | GTCAGGAACTTGAAGAAGGTCACACAGCAGACCTCTTaGTCCCTGAGCTGGGACCTGCCTGTGCTCCTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: VRNLKKVTQQTS*SLSWDLPVLLR Trigger: CCTTAGGAGCACAGGCAGGTCCCAGCTCAGGGATCAAGAGGTCTGCTGTGTGACCTTCTTCAAGTTCCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360899.2 |
||
| CDS TCA 72 bp | GTTCCCAAGAGGACAGGATCTAATTCTCTGGCACTTTaGCCTGCTGTGTGCACAAGAGCACCTCCGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VPKRTGSNSLAL*PAVCTRAPPGG Trigger: GCCTCCCGGAGGTGCTCTTGTGCACACAGCAGGTCAAAGTGCCAGAGAATTAGATCCTGTCCTCTTGGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
||
| CDS GCA 72 bp | CATCTCTGGGGTTGCTGTGGATTTCTCATGGCAGTGTaGACGAAGGGCCTAGCAAAATGCCCAGCGCCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: HLWGCCGFLMAV*TKGLAKCPAPS Trigger: ACTAGGCGCTGGGCATTTTGCTAGGCCCTTCGTGCACACTGCCATGAGAAATCCACAGCAACCCCAGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
||
| CDS GCA 72 bp | ATGCAGGACCTTGGCCACAGGACCTCTGGGGAACATTaGTTTAGCTTTCTGAGCTCTGTGGCACAAGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: MQDLGHRTSGEH*FSFLSSVAQEG Trigger: GCCCTCTTGTGCCACAGAGCTCAGAAAGCTAAAGCAATGTTCCCCAGAGGTCCTGTGGCCAAGGTCCTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
||
| CDS CCA 72 bp | AAATGCACAAAACAGATCAAAATGGCCCAGGAGGGCTaGGGCCACATAGACAACCAGGGCAATGCAGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: KCTKQIKMAQEG*GHIDNQGNAGP Trigger: GGGCCCTGCATTGCCCTGGTTGTCTATGTGGCCCCAGCCCTCCTGGGCCATTTTGATCTGTTTTGTGCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000553367.6 ENST00000553623.1 ENST00000671653.1 |
||
| CDS CCA 72 bp | TCACACAGCAGACCTCTTGATCCGTTCGGTTTCCGTTaGACAGCGCTGGTCTCGAGTTCAAGCTGTGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SHSRPLDPFGFR*TALVSSSSCAN Trigger: GTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGGATCAAGAGGTCTGCTGTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663191.1 |
||
| CDS CAA 72 bp | CTGCCTGTGCTCCTAAGGGCATGGCCTTTCCGGCAGTaGGCTCCAAGTCACTTTGGAGAGACATTAGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LPVLLRAWPFRQ*APSHFGETLAS Trigger: GGATGCTAATGTCTCTCCAAAGTGACTTGGAGCCAACTGCCGGAAAGGCCATGCCCTTAGGAGCACAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000360899.2 ENST00000553623.1 ENST00000556697.1 |
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| CDS GCA 72 bp | CATCTGACCAAGGGCCTGTTTTTCTACTGGAGACCCTaGGCAGGTTACTCCACGGTTCTGCACCTGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HLTKGLFFYWRP*AGYSTVLHLFP Trigger: AGGAAACAGGTGCAGAACCGTGGAGTAACCTGCGCAGGGTCTCCAGTAGAAAAACAGGCCCTTGGTCAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000553367.6 ENST00000554195.1 ENST00000556308.1 ENST00000655680.1 ENST00000656919.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 72 bp | TTCCAGCAAGGGCACATGGTTTATTTGGGAGGTGATTaGAGGACTGCAGGGAACGGGGAACAAGGCAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: FQQGHMVYLGGD*RTAGNGEQGRE Trigger: CTCTCTGCCTTGTTCCCCGTTCCCTGCAGTCCTGCAATCACCTCCCAAATAAACCATGTGCCCTTGCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 72 bp | CTGCCTCCATGCTCGCTGGAGGATGGTTTTCTGACATaGCCTTTCTTTCCCTGCTCAGTCTTGCTCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: LPPCSLEDGFLT*PFFPCSVLLRS Trigger: GCTTCTGAGCAAGACTGAGCAGGGAAAGAAAGGCCATGTCAGAAAACCATCCTCCAGCGAGCATGGAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 72 bp | GATAGAGCTTGGAGCATCCTCCTAAGGGCTCACTGCTaGCTGAGGGCTGTTCCCAAGAGGACAGGATCTAAT | + |
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Preference number: 6 (lower is better) Translates to: DRAWSILLRAHC*LRAVPKRTGSN Trigger: ATTAGATCCTGTCCTCTTGGGAACAGCCCTCAGCCAGCAGTGAGCCCTTAGGAGGATGCTCCAAGCTCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 72 bp | CCACAGCTTGTCACAGTTGGCCTGCATGCCAGACAGTaGCTCCTCGGGGCAATGACAGCATCTTTCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PQLVTVGLHARQ*LLGAMTASFFS Trigger: AGAAAAGAAAGATGCTGTCATTGCCCCGAGGAGCCACTGTCTGGCATGCAGGCCAACTGTGACAAGCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556697.1 |
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| CDS TCA 72 bp | TCGGCACACAGTGGGGCCTCAGGAAGTATTTGCTGGTaGGTTATTGATGAACCCATCTCTGGGGTTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SAHSGASGSICW*VIDEPISGVAV Trigger: CACAGCAACCCCAGAGATGGGTTCATCAATAACTCACCAGCAAATACTTCCTGAGGCCCCACTGTGTGCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS TCA 72 bp | GTCAGGAACTTGAAGAAGGTCACACAGCAGACCTCTTaGTCCCTCAACATGCAGCTTCCTCGTCTGGAACGC | + |
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Preference number: 6 (lower is better) Translates to: VRNLKKVTQQTS*SLNMQLPRLER Trigger: GCGTTCCAGACGAGGAAGCTGCATGTTGAGGGATCAAGAGGTCTGCTGTGTGACCTTCTTCAAGTTCCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655680.1 ENST00000671653.1 |
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| CDS CCA 72 bp | TTCAAGCTGTGCCAACAGCGCCCCTGGTGGCCGAAGTaGGTAAATTCATCTGACCAAGGGCCTGTTTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: FKLCQQRPWWPK*VNSSDQGPVFL Trigger: TAGAAAAACAGGCCCTTGGTCAGATGAATTTACCCACTTCGGCCACCAGGGGCGCTGTTGGCACAGCTTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000553367.6 ENST00000554195.1 ENST00000556308.1 ENST00000655680.1 ENST00000656919.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CCA 72 bp | GCTCTCCTTGCTGATTGTCAAAATGTTCTTCACTCCTaGGAACCCAATGTCAGGGTCACCGCCTCTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ALLADCQNVLHS*EPNVRVTASGK Trigger: CTTCCCAGAGGCGGTGACCCTGACATTGGGTTCCCAGGAGTGAAGAACATTTTGACAATCAGCAAGGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000556308.1 ENST00000655680.1 ENST00000671653.1 |
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| CDS CAA 72 bp | GTGGCTCCTCGGGGCAATGACAGCATCTTTCTTTTCTaGAGCTTCTCTGAGGCCAGCCCAAGACACAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: VAPRGNDSIFLF*SFSEASPRHSS Trigger: TGAACTGTGTCTTGGGCTGGCCTCAGAGAAGCTCAAGAAAAGAAAGATGCTGTCATTGCCCCGAGGAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556697.1 |
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| CDS CAA 90 bp | GCTCGGCACACAGTGGGGCCTCAGGAAGTATTTGCTGGTGAGTTATaGATGAACCCATCTCTGGGGTTGCTGTGGATTTCTCATGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: ARHTVGPQEVFAGEL*MNPSLGLLWISHGS Trigger: ACTGCCATGAGAAATCCACAGCAACCCCAGAGATGGGTTCATCAATAACTCACCAGCAAATACTTCCTGAGGCCCCACTGTGTGCCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 72 bp | TTTCTCATGGCAGTGTGCACGAAGGGCCTAGCAAAATaGCCAGCGCCTAGTAGGTGCTCAATAAAATGCCAG | + |
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Preference number: 6 (lower is better) Translates to: FLMAVCTKGLAK*PAPSRCSIKCQ Trigger: CTGGCATTTTATTGAGCACCTACTAGGCGCTGGGCATTTTGCTAGGCCCTTCGTGCACACTGCCATGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CAA 90 bp | TTTTCTTGTGTACTTTTTAGAAATGTGGCTTACGTTCGGTTTCCGTaGGACAGCGCTGGTCTCGAGTTCAAGCTGTGCCAACAGCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: FSCVLFRNVAYVRFP*DSAGLEFKLCQQRP Trigger: GGGGCGCTGTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGTAAGCCACATTTCTAAAAAGTACACAAGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000554195.1 ENST00000656919.1 |
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| CDS CCA 72 bp | AAGTGTGTTGGAAGGCAGGGTCGATATTGCCGGCTTTaGGGGGATGAGTCGATAACGATTGAAAGTGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: KCVGRQGRYCRL*GDESITIESEQ Trigger: TTGCTCACTTTCAATCGTTATCGACTCATCCCCCCAAAGCCGGCAATATCGACCCTGCCTTCCAACACACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556308.1 |
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| CDS CAA 72 bp | ATGTATCTGAGTTTCTCCTCGTCTTTCAGGTTCTGCTaGGATTTCAGCTTCTCAGAGAGGCTGTCACGGCCC | + |
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Preference number: 6 (lower is better) Translates to: MYLSFSSSFRFC*DFSFSERLSRP Trigger: GGGCCGTGACAGCCTCTCTGAGAAGCTGAAATCCAAGCAGAACCTGAAAGACGAGGAGAAACTCAGATACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CAA 90 bp | CCAGTCTTTATGTATCTGAGTTTCTCCTCGTCTTTCAGGTTCTGCTaGGATTTCAGCTTCTCAGAGAGGCTGTCACGGCCCTCTCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: PVFMYLSFSSSFRFC*DFSFSERLSRPSLS Trigger: TGAGAGAGAGGGCCGTGACAGCCTCTCTGAGAAGCTGAAATCCAAGCAGAACCTGAAAGACGAGGAGAAACTCAGATACATAAAGACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 72 bp | GAGAGCTGCCTTTGTCGTAAAATAATTTCGGGCGCTTaGCTCTCTCTCACGCACAACTGTTCAAGGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ESCLCRKIISGA*LSLTHNCSRLF Trigger: AAAGAGCCTTGAACAGTTGTGCGTGAGAGAGAGGCAAGCGCCCGAAATTATTTTACGACAAAGGCAGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000360899.2 ENST00000553623.1 ENST00000556697.1 |
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| CDS CCA 72 bp | TACTTTTTAGAAATGTGGCTTACGTTCGGTTTCCGTTaGACAGCGCTGGTCTCGAGTTCAAGCTGTGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: YFLEMWLTFGFR*TALVSSSSCAN Trigger: GTTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGTAAGCCACATTTCTAAAAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000554195.1 ENST00000656919.1 |
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| CDS CAA 72 bp | ACAGTGGGGCCTCAGGAAGTATTTGCTGGTGAGTTATaGATGAACCCATCTCTGGGGTTGCTGTGGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: TVGPQEVFAGEL*MNPSLGLLWIS Trigger: AGAAATCCACAGCAACCCCAGAGATGGGTTCATCAATAACTCACCAGCAAATACTTCCTGAGGCCCCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS CAA 72 bp | GTACTTTTTAGAAATGTGGCTTACGTTCGGTTTCCGTaGGACAGCGCTGGTCTCGAGTTCAAGCTGTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: VLFRNVAYVRFP*DSAGLEFKLCQ Trigger: TTGGCACAGCTTGAACTCGAGACCAGCGCTGTCCAACGGAAACCGAACGTAAGCCACATTTCTAAAAAGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000554195.1 ENST00000656919.1 |
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| CDS CAA 72 bp | CCCAGGACAAAGTCATTTGCTCCCTCCAGGTTTACTTaGCTTTACTTTGCTAAACCACCACGCTTGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PRTKSFAPSRFT*LYFAKPPRLLS Trigger: GGAGAGCAAGCGTGGTGGTTTAGCAAAGTAAAGCAAAGTAAACCTGGAGGGAGCAAATGACTTTGTCCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556697.1 |
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| CDS CAA 90 bp | CCTTTCACACCCAGGACAAAGTCATTTGCTCCCTCCAGGTTTACTTaGCTTTACTTTGCTAAACCACCACGCTTGCTCTCCTCTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PFTPRTKSFAPSRFT*LYFAKPPRLLSSAS Trigger: TGAAGCAGAGGAGAGCAAGCGTGGTGGTTTAGCAAAGTAAAGCAAAGTAAACCTGGAGGGAGCAAATGACTTTGTCCTGGGTGTGAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556697.1 |
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| CDS CAA 90 bp | GACCTACAATGGGGCCTTACCCTTTCACACCCAGGACAAAGTCATTaGCTCCCTCCAGGTTTACTTTGCTTTACTTTGCTAAACCACCAC | + |
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Preference number: 6 (lower is better) Translates to: DLQWGLTLSHPGQSH*LPPGLLCFTLLNHH Trigger: GTGGTGGTTTAGCAAAGTAAAGCAAAGTAAACCTGGAGGGAGCAAATGACTTTGTCCTGGGTGTGAAAGGGTAAGGCCCCATTGTAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556697.1 |
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| CDS CCA 72 bp | AGACCTCTTGATCCCTCAACATGCAGCTTCCTCGTCTaGAACGCTCTCCTTGCTGATTGTCAAAATGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: RPLDPSTCSFLV*NALLADCQNVL Trigger: AAGAACATTTTGACAATCAGCAAGGAGAGCGTTCCAGACGAGGAAGCTGCATGTTGAGGGATCAAGAGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655680.1 ENST00000671653.1 |
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| CDS CAA 72 bp | AGTCATTTGCTCCCTCCAGGTTTACTTTGCTTTACTTaGCTAAACCACCACGCTTGCTCTCCTCTGCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: SHLLPPGLLCFT*LNHHACSPLLH Trigger: GTGAAGCAGAGGAGAGCAAGCGTGGTGGTTTAGCAAAGTAAAGCAAAGTAAACCTGGAGGGAGCAAATGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556697.1 |
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| CDS CAA 72 bp | TGGGGCCTTACCCTTTCACACCCAGGACAAAGTCATTaGCTCCCTCCAGGTTTACTTTGCTTTACTTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: WGLTLSHPGQSH*LPPGLLCFTLL Trigger: TAGCAAAGTAAAGCAAAGTAAACCTGGAGGGAGCAAATGACTTTGTCCTGGGTGTGAAAGGGTAAGGCCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556697.1 |
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| CDS TCA 72 bp | TCTCACGCACAACTGTTCAAGGCTCTTTCCTCCGACTaGCTTTCATGTCGCAAAACTCTATTAAGCTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SHAQLFKALSSD*LSCRKTLLSFH Trigger: ATGAAAGCTTAATAGAGTTTTGCGACATGAAAGTCAGTCGGAGGAAAGAGCCTTGAACAGTTGTGCGTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360899.2 ENST00000556697.1 |
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| CDS TCA 72 bp | GTGACAGTTGGCTATGTTTTTATTATAGCATCTTGTTaGCTGGGAGGTAGATTGCAGGCCCTTTTCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VTVGYVFIIASC*LGGRLQALFSP Trigger: AGGAGAGAAAAGGGCCTGCAATCTACCTCCCAGTCAACAAGATGCTATAATAAAAACATAGCCAACTGTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000553367.6 ENST00000554195.1 ENST00000556308.1 ENST00000655680.1 ENST00000656919.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS TCA 72 bp | CCTCTACTTGAATGCTTTTCCCAGTCTTTATGTATCTaGGTTTCTCCTCGTCTTTCAGGTTCTGCTTGGATT | + |
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Preference number: 6 (lower is better) Translates to: PLLECFSQSLCI*VSPRLSGSAWI Trigger: AATCCAAGCAGAACCTGAAAGACGAGGAGAAACTCAGATACATAAAGACTGGGAAAAGCATTCAAGTAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS TCA 72 bp | TGCACCTGTTTCCTCATCTGGCACCGTAATAAACGCTaGGTGACAGTTGGCTATGTTTTTATTATAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: CTCFLIWHRNKR*VTVGYVFIIAS Trigger: AGATGCTATAATAAAAACATAGCCAACTGTCACTCAGCGTTTATTACGGTGCCAGATGAGGAAACAGGTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000553367.6 ENST00000554195.1 ENST00000556308.1 ENST00000655680.1 ENST00000656919.1 ENST00000663191.1 ENST00000671653.1 |
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| CDS GCA 72 bp | GACCTCTCTCTGTTACCATCTAGCACATCATCTGATTaGATTTTCTCCAGAATGATCTTGCTTGTTTCCATG | + |
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Preference number: 6 (lower is better) Translates to: DLSLLPSSTSSD*IFSRMILLVSM Trigger: CATGGAAACAAGCAAGATCATTCTGGAGAAAATGCAATCAGATGATGTGCTAGATGGTAACAGAGAGAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000360899.2 ENST00000556697.1 ENST00000655680.1 ENST00000663191.1 ENST00000671653.1 |
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