Pregenerated sensors for LINC00487 (Homo sapiens)
Ensembl gene IDs: ENSG00000205837Ensembl transcript IDs: ENST00000382045.3, ENST00000412528.5, ENST00000424179.5
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTCAGGGAGGTGGGCACCCAGCGGTCCCTCAGCACCCGTCCCGTGTaGCACAGTCCAGCCGCCTCCCAGGGCCGAGGAGGGGAGACGCAG | + |
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Preference number: 5 (lower is better) Translates to: VREVGTQRSLSTRPV*HSPAASQGRGGETQ Trigger: CTGCGTCTCCCCTCCTCGGCCCTGGGAGGCGGCTGGACTGTGCCACACGGGACGGGTGCTGAGGGACCGCTGGGTGCCCACCTCCCTGAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CCA 90 bp | GCTTCCAAATGCAGCATTGTGCAGCTGCGTGAAGGTCAGTCTGAGTaGGCAGAGGCTGGGCTTAGGTCAGGAGGTCAGTGCACAGTTGTT | + |
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Preference number: 5 (lower is better) Translates to: ASKCSIVQLREGQSE*AEAGLRSGGQCTVV Trigger: AACAACTGTGCACTGACCTCCTGACCTAAGCCCAGCCTCTGCCCACTCAGACTGACCTTCACGCAGCTGCACAATGCTGCATTTGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382045.3 ENST00000412528.5 |
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| CDS GCA 90 bp | GTGGGGTGCTGTGTCCCAGTTTCTATAAAGCAAGCCTGCCCTTCATaGTTTGCCCCCTTCCTACAAGCCCACCTTCCCTTTCACTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: VGCCVPVSIKQACPS*FAPFLQAHLPFHFS Trigger: AGAGAAGTGAAAGGGAAGGTGGGCTTGTAGGAAGGGGGCAAAGCATGAAGGGCAGGCTTGCTTTATAGAAACTGGGACACAGCACCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS GCA 90 bp | ACTCATCCTGTGGGGTGCTGTGTCCCAGTTTCTATAAAGCAAGCCTaGCCTTCATGCTTTGCCCCCTTCCTACAAGCCCACCTTCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: THPVGCCVPVSIKQA*PSCFAPFLQAHLPF Trigger: AAAGGGAAGGTGGGCTTGTAGGAAGGGGGCAAAGCATGAAGGGCAGGCTTGCTTTATAGAAACTGGGACACAGCACCCCACAGGATGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS GCA 90 bp | AATCTCAACAGAGGGAAACGAATGTGGTCAGGTCCGGCTTCCAAATaGAGCATTGTGCAGCTGCGTGAAGGTCAGTCTGAGTGGGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: NLNRGKRMWSGPASK*SIVQLREGQSEWAE Trigger: CTCTGCCCACTCAGACTGACCTTCACGCAGCTGCACAATGCTGCATTTGGAAGCCGGACCTGACCACATTCGTTTCCCTCTGTTGAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382045.3 ENST00000412528.5 |
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| CDS CCA 90 bp | ATTCATCTGAGAGAGATGTGCCTGGAGAGCAGAATGGCACAAGGATaGGCTCTAGGGAAGGCCACAGGTGAAGGGATGAATCATCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: IHLREMCLESRMAQG*ALGKATGEGMNHPR Trigger: TCTGGGATGATTCATCCCTTCACCTGTGGCCTTCCCTAGAGCCCATCCTTGTGCCATTCTGCTCTCCAGGCACATCTCTCTCAGATGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS TCA 90 bp | GGAGAGCAGAATGGCACAAGGATGGGCTCTAGGGAAGGCCACAGGTaGAGGGATGAATCATCCCAGAAGAAAAGAAACCCCTTCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: GEQNGTRMGSREGHR*RDESSQKKRNPFFS Trigger: TGAGAAGAAGGGGTTTCTTTTCTTCTGGGATGATTCATCCCTTCACCTGTGGCCTTCCCTAGAGCCCATCCTTGTGCCATTCTGCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS GCA 90 bp | GTGCTGTGTCCCAGTTTCTATAAAGCAAGCCTGCCCTTCATGCTTTaGCCCCTTCCTACAAGCCCACCTTCCCTTTCACTTCTCTACCTT | + |
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Preference number: 5 (lower is better) Translates to: VLCPSFYKASLPFML*PLPTSPPSLSLLYL Trigger: AAGGTAGAGAAGTGAAAGGGAAGGTGGGCTTGTAGGAAGGGGGCAAAGCATGAAGGGCAGGCTTGCTTTATAGAAACTGGGACACAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CCA 90 bp | GGAGGTCAGTGCACAGTTGTTTTGAGAGATGATGGAGATCTCAGCTaGGTCCCAGGCATCACTGTGGAGAGGATAGGGCAGATTCAATCA | + |
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Preference number: 5 (lower is better) Translates to: GGQCTVVLRDDGDLS*VPGITVERIGQIQS Trigger: TGATTGAATCTGCCCTATCCTCTCCACAGTGATGCCTGGGACCCAGCTGAGATCTCCATCATCTCTCAAAACAACTGTGCACTGACCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS GCA 90 bp | GTGAGGTTCCAGCATTTCTACTCTCTGGAGGGAAGAGCAACAAGATaGCATCTTGAAAGAAGAGAGATCAGGTCCTCAGCAGACACTGAA | + |
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Preference number: 5 (lower is better) Translates to: VRFQHFYSLEGRATR*HLERREIRSSADTE Trigger: TTCAGTGTCTGCTGAGGACCTGATCTCTCTTCTTTCAAGATGGCATCTTGTTGCTCTTCCCTCCAGAGAGTAGAAATGCTGGAACCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CCA 90 bp | CAAGAGCACTTCTATGTTTTGATGGCCCTGCCTGGACAGAGATCTTaGGTCTCCACTCCAGCTAATCAACATTCCACTGAGACAGCATTT | + |
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Preference number: 5 (lower is better) Translates to: QEHFYVLMALPGQRS*VSTPANQHSTETAF Trigger: AAATGCTGTCTCAGTGGAATGTTGATTAGCTGGAGTGGAGACCCAAGATCTCTGTCCAGGCAGGGCCATCAAAACATAGAAGTGCTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS TCA 90 bp | CTCTCAAATTGTTCTCCATTGGAGTCCTCACATGTCTCTTCAATGTaGCCTGGATACTTGATCCTCTGCCAGGAAACAGCTCTTACTCTA | + |
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Preference number: 5 (lower is better) Translates to: LSNCSPLESSHVSSM*PGYLILCQETALTL Trigger: TAGAGTAAGAGCTGTTTCCTGGCAGAGGATCAAGTATCCAGGTCACATTGAAGAGACATGTGAGGACTCCAATGGAGAACAATTTGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS GCA 90 bp | GACAGACCAATTTTCTTTAACAGCGAAGTCAGAAGTTGTTCACATTaGTTTTCTCCACACATGGCTGGTCACTCATCAATCACAGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: DRPIFFNSEVRSCSH*FSPHMAGHSSITGP Trigger: TGGCCCTGTGATTGATGAGTGACCAGCCATGTGTGGAGAAAAGCAATGTGAACAACTTCTGACTTCGCTGTTAAAGAAAATTGGTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000382045.3 ENST00000424179.5 |
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| CDS GCA 90 bp | CACCATCCAATTTTCTTTAACAGCGAAGTCAGAAGTTGTTCACATTaGTTTTCTCCACACATGGCTGGTCACTCATCAATCACAGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: HHPIFFNSEVRSCSH*FSPHMAGHSSITGP Trigger: TGGCCCTGTGATTGATGAGTGACCAGCCATGTGTGGAGAAAAGCAATGTGAACAACTTCTGACTTCGCTGTTAAAGAAAATTGGATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412528.5 |
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| CDS CCA 90 bp | AAATTGTTCTCCATTGGAGTCCTCACATGTCTCTTCAATGTGACCTaGATACTTGATCCTCTGCCAGGAAACAGCTCTTACTCTAGACTG | + |
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Preference number: 5 (lower is better) Translates to: KLFSIGVLTCLFNVT*ILDPLPGNSSYSRL Trigger: CAGTCTAGAGTAAGAGCTGTTTCCTGGCAGAGGATCAAGTATCCAGGTCACATTGAAGAGACATGTGAGGACTCCAATGGAGAACAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CCA 90 bp | GAGAGGATAGGGCAGATTCAATCATTATTCCAGAGGTCACAGCAGTaGGGCCTACCTGATTACACAGTGGTGAGGAAACAGATAAATAAA | + |
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Preference number: 5 (lower is better) Translates to: ERIGQIQSLFQRSQQ*GLPDYTVVRKQINK Trigger: TTTATTTATCTGTTTCCTCACCACTGTGTAATCAGGTAGGCCCCACTGCTGTGACCTCTGGAATAATGATTGAATCTGCCCTATCCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS TCA 90 bp | TTCATGTCTCTCATACTTAAAGAATCTCAGTATAGAGTTCAGAGCTaGTCGAACAATTTGGCGGTGTCAGGAACCCTGGAAAAATTCTTC | + |
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Preference number: 5 (lower is better) Translates to: FMSLILKESQYRVQS*SNNLAVSGTLEKFF Trigger: GAAGAATTTTTCCAGGGTTCCTGACACCGCCAAATTGTTCGATCAGCTCTGAACTCTATACTGAGATTCTTTAAGTATGAGAGACATGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000382045.3 ENST00000424179.5 |
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| CDS GCA 72 bp | GGTCAGGTCCGGCTTCCAAATGCAGCATTGTGCAGCTaGGTGAAGGTCAGTCTGAGTGGGCAGAGGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GQVRLPNAALCS*VKVSLSGQRLG Trigger: GCCCAGCCTCTGCCCACTCAGACTGACCTTCACGCAGCTGCACAATGCTGCATTTGGAAGCCGGACCTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382045.3 ENST00000412528.5 |
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| CDS CAA 90 bp | ACAGAGGGAAACGAATGTGGTCAGGTCCGGCTTCCAAATGCAGCATaGTGCAGCTGCGTGAAGGTCAGTCTGAGTGGGCAGAGGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: TEGNECGQVRLPNAA*CSCVKVSLSGQRLG Trigger: GCCCAGCCTCTGCCCACTCAGACTGACCTTCACGCAGCTGCACAATGCTGCATTTGGAAGCCGGACCTGACCACATTCGTTTCCCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382045.3 ENST00000412528.5 |
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| CDS TCA 72 bp | CAAGCCCACCTTCCCTTTCACTTCTCTACCTTGTTATaGTGCGGCAGGAGGCCCGCACCAGGAGCCAACCAG | + |
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Preference number: 6 (lower is better) Translates to: QAHLPFHFSTLL*CGRRPAPGANQ Trigger: CTGGTTGGCTCCTGGTGCGGGCCTCCTGCCGCATCATAACAAGGTAGAGAAGTGAAAGGGAAGGTGGGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CCA 72 bp | TCTGGGGAGCAGGGTTCTCAGAGCTTCCTTCCAACTTaGGACATGGTTGCCAGGCTCCTCTGCCTTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SGEQGSQSFLPT*DMVARLLCLSA Trigger: GGCAGAAAGGCAGAGGAGCCTGGCAACCATGTCCCAAGTTGGAAGGAAGCTCTGAGAACCCTGCTCCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CCA 72 bp | GCTCCTGTAGGCCAGCCAGCCTTTGCTCAGGATTTCTaGGGAGCAGGGTTCTCAGAGCTTCCTTCCAACTTG | + |
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Preference number: 6 (lower is better) Translates to: APVGQPAFAQDF*GAGFSELPSNL Trigger: CAAGTTGGAAGGAAGCTCTGAGAACCCTGCTCCCCAGAAATCCTGAGCAAAGGCTGGCTGGCCTACAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CAA 90 bp | TGGGCAGAGGCTGGGCTTAGGTCAGGAGGTCAGTGCACAGTTGTTTaGAGAGATGATGGAGATCTCAGCTGGGTCCCAGGCATCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: WAEAGLRSGGQCTVV*RDDGDLSWVPGITV Trigger: CACAGTGATGCCTGGGACCCAGCTGAGATCTCCATCATCTCTCAAAACAACTGTGCACTGACCTCCTGACCTAAGCCCAGCCTCTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382045.3 ENST00000412528.5 |
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| CDS GCA 72 bp | GTGGGGTGCTGTGTCCCAGTTTCTATAAAGCAAGCCTaGCCTTCATGCTTTGCCCCCTTCCTACAAGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: VGCCVPVSIKQA*PSCFAPFLQAH Trigger: GTGGGCTTGTAGGAAGGGGGCAAAGCATGAAGGGCAGGCTTGCTTTATAGAAACTGGGACACAGCACCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CAA 72 bp | GCTGGGCTTAGGTCAGGAGGTCAGTGCACAGTTGTTTaGAGAGATGATGGAGATCTCAGCTGGGTCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: AGLRSGGQCTVV*RDDGDLSWVPG Trigger: GCCTGGGACCCAGCTGAGATCTCCATCATCTCTCAAAACAACTGTGCACTGACCTCCTGACCTAAGCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382045.3 ENST00000412528.5 |
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| CDS CAA 72 bp | AACGAATGTGGTCAGGTCCGGCTTCCAAATGCAGCATaGTGCAGCTGCGTGAAGGTCAGTCTGAGTGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: NECGQVRLPNAA*CSCVKVSLSGQ Trigger: CTGCCCACTCAGACTGACCTTCACGCAGCTGCACAATGCTGCATTTGGAAGCCGGACCTGACCACATTCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382045.3 ENST00000412528.5 |
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| CDS GCA 72 bp | AGAGGGAAACGAATGTGGTCAGGTCCGGCTTCCAAATaGAGCATTGTGCAGCTGCGTGAAGGTCAGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RGKRMWSGPASK*SIVQLREGQSE Trigger: CTCAGACTGACCTTCACGCAGCTGCACAATGCTGCATTTGGAAGCCGGACCTGACCACATTCGTTTCCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382045.3 ENST00000412528.5 |
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| CDS CCA 72 bp | AGAGAGATGTGCCTGGAGAGCAGAATGGCACAAGGATaGGCTCTAGGGAAGGCCACAGGTGAAGGGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: REMCLESRMAQG*ALGKATGEGMN Trigger: ATTCATCCCTTCACCTGTGGCCTTCCCTAGAGCCCATCCTTGTGCCATTCTGCTCTCCAGGCACATCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CCA 72 bp | TGCACAGTTGTTTTGAGAGATGATGGAGATCTCAGCTaGGTCCCAGGCATCACTGTGGAGAGGATAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: CTVVLRDDGDLS*VPGITVERIGQ Trigger: CTGCCCTATCCTCTCCACAGTGATGCCTGGGACCCAGCTGAGATCTCCATCATCTCTCAAAACAACTGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS TCA 72 bp | AATGGCACAAGGATGGGCTCTAGGGAAGGCCACAGGTaGAGGGATGAATCATCCCAGAAGAAAAGAAACCCC | + |
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Preference number: 6 (lower is better) Translates to: NGTRMGSREGHR*RDESSQKKRNP Trigger: GGGGTTTCTTTTCTTCTGGGATGATTCATCCCTTCACCTGTGGCCTTCCCTAGAGCCCATCCTTGTGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS GCA 72 bp | CCCAGTTTCTATAAAGCAAGCCTGCCCTTCATGCTTTaGCCCCTTCCTACAAGCCCACCTTCCCTTTCACTT | + |
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Preference number: 6 (lower is better) Translates to: PSFYKASLPFML*PLPTSPPSLSL Trigger: AAGTGAAAGGGAAGGTGGGCTTGTAGGAAGGGGGCAAAGCATGAAGGGCAGGCTTGCTTTATAGAAACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS GCA 72 bp | TGTGTCCCAGTTTCTATAAAGCAAGCCTGCCCTTCATaGTTTGCCCCCTTCCTACAAGCCCACCTTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: CVPVSIKQACPS*FAPFLQAHLPF Trigger: AAAGGGAAGGTGGGCTTGTAGGAAGGGGGCAAAGCATGAAGGGCAGGCTTGCTTTATAGAAACTGGGACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CCA 72 bp | GGGCAGATTCAATCATTATTCCAGAGGTCACAGCAGTaGGGCCTACCTGATTACACAGTGGTGAGGAAACAG | + |
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Preference number: 6 (lower is better) Translates to: GQIQSLFQRSQQ*GLPDYTVVRKQ Trigger: CTGTTTCCTCACCACTGTGTAATCAGGTAGGCCCCACTGCTGTGACCTCTGGAATAATGATTGAATCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CAA 90 bp | AGAAGAGAGATCAGGTCCTCAGCAGACACTGAACTTGCCAACACCTaGATCTTGAACTTCCTGGCCTCCAGAACTGGTTTCTCACTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RREIRSSADTELANT*ILNFLASRTGFSLS Trigger: TGAGAGTGAGAAACCAGTTCTGGAGGCCAGGAAGTTCAAGATCAAGGTGTTGGCAAGTTCAGTGTCTGCTGAGGACCTGATCTCTCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CAA 90 bp | TCCAGCATTTCTACTCTCTGGAGGGAAGAGCAACAAGATGCCATCTaGAAAGAAGAGAGATCAGGTCCTCAGCAGACACTGAACTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSISTLWREEQQDAI*KEERSGPQQTLNLP Trigger: TGGCAAGTTCAGTGTCTGCTGAGGACCTGATCTCTCTTCTTTCAAGATGGCATCTTGTTGCTCTTCCCTCCAGAGAGTAGAAATGCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS TCA 72 bp | TGTTCTCCATTGGAGTCCTCACATGTCTCTTCAATGTaGCCTGGATACTTGATCCTCTGCCAGGAAACAGCT | + |
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Preference number: 6 (lower is better) Translates to: CSPLESSHVSSM*PGYLILCQETA Trigger: AGCTGTTTCCTGGCAGAGGATCAAGTATCCAGGTCACATTGAAGAGACATGTGAGGACTCCAATGGAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS GCA 72 bp | CAGCATTTCTACTCTCTGGAGGGAAGAGCAACAAGATaGCATCTTGAAAGAAGAGAGATCAGGTCCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: QHFYSLEGRATR*HLERREIRSSA Trigger: TGCTGAGGACCTGATCTCTCTTCTTTCAAGATGGCATCTTGTTGCTCTTCCCTCCAGAGAGTAGAAATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CCA 72 bp | TCCATTGGAGTCCTCACATGTCTCTTCAATGTGACCTaGATACTTGATCCTCTGCCAGGAAACAGCTCTTAC | + |
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Preference number: 6 (lower is better) Translates to: SIGVLTCLFNVT*ILDPLPGNSSY Trigger: GTAAGAGCTGTTTCCTGGCAGAGGATCAAGTATCCAGGTCACATTGAAGAGACATGTGAGGACTCCAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382045.3 |
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| CDS CCA 72 bp | AGAGCTGATCGAACAATTTGGCGGTGTCAGGAACCCTaGAAAAATTCTTCTTCTTGCTGGCAAGTCTTAATG | + |
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Preference number: 6 (lower is better) Translates to: RADRTIWRCQEP*KNSSSCWQVLM Trigger: CATTAAGACTTGCCAGCAAGAAGAAGAATTTTTCCAGGGTTCCTGACACCGCCAAATTGTTCGATCAGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000382045.3 ENST00000424179.5 |
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| CDS CAA 72 bp | ACAGATCGTAGTCAGATTTTGCGCACAGAGTGTTATTaGCTGACCCCTGAGTTAGGTCACAATAGCAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: TDRSQILRTECY*LTPELGHNSKE Trigger: CTCTTTGCTATTGTGACCTAACTCAGGGGTCAGCAAATAACACTCTGTGCGCAAAATCTGACTACGATCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000382045.3 ENST00000424179.5 |
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| CDS TCA 72 bp | AATTACCTTTGGTCCTTCTCCATATCGTTGAGCATTTaGGTCGTTTCATCAGAATCTCTAAAGGCACCATCC | + |
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Preference number: 6 (lower is better) Translates to: NYLWSFSISLSI*VVSSESLKAPS Trigger: GGATGGTGCCTTTAGAGATTCTGATGAAACGACTCAAATGCTCAACGATATGGAGAAGGACCAAAGGTAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412528.5 |
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| CDS CCA 72 bp | AATCTCAGTATAGAGTTCAGAGCTGATCGAACAATTTaGCGGTGTCAGGAACCCTGGAAAAATTCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: NLSIEFRADRTI*RCQEPWKNSSS Trigger: AGAAGAAGAATTTTTCCAGGGTTCCTGACACCGCCAAATTGTTCGATCAGCTCTGAACTCTATACTGAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000382045.3 ENST00000424179.5 |
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| CDS GCA 72 bp | ATTTTCTTTAACAGCGAAGTCAGAAGTTGTTCACATTaGTTTTCTCCACACATGGCTGGTCACTCATCAATC | + |
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Preference number: 6 (lower is better) Translates to: IFFNSEVRSCSH*FSPHMAGHSSI Trigger: GATTGATGAGTGACCAGCCATGTGTGGAGAAAAGCAATGTGAACAACTTCTGACTTCGCTGTTAAAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000382045.3 ENST00000412528.5 ENST00000424179.5 |
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