Pregenerated sensors for LINC00427 (Homo sapiens)

Ensembl gene IDs: ENSG00000236463

Ensembl transcript IDs: ENST00000412722.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 72 bp	CAGAATGCACTCAGTGTCTCTCCTTCAGACGCTTTTTaGACCCTCGGAAGCCTGGTCTGCTCAGGTCAATTC	+
Preference number: 6 (lower is better) Translates to: QNALSVSPSDAF*TLGSLVCSGQF Trigger: GAATTGACCTGAGCAGACCAGGCTTCCGAGGGTCAAAAAAGCGTCTGAAGGAGAGACACTGAGTGCATTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412722.1
CDS TCA 72 bp	CAACACAGCCTACATTTCGTGTGTTTCTCGTATGAATaGGTTGCAGTGTGTGCTGTGGTTAAGCTGGTGGGC	+
Preference number: 6 (lower is better) Translates to: QHSLHFVCFSYE*VAVCAVVKLVG Trigger: GCCCACCAGCTTAACCACAGCACACACTGCAACTCATTCATACGAGAAACACACGAAATGTAGGCTGTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412722.1
CDS TCA 72 bp	GGTCAATTCTGCAACCCATCTCACAGGCATAAATCTTaGCATGGTCTTCACACCCTTTTCCTCTGGCCCCTA	+
Preference number: 6 (lower is better) Translates to: GQFCNPSHRHKS*HGLHTLFLWPL Trigger: TAGGGGCCAGAGGAAAAGGGTGTGAAGACCATGTCAAGATTTATGCCTGTGAGATGGGTTGCAGAATTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412722.1
CDS TCA 72 bp	ATTCAGGTCCTCCAAAATAGTCCCAGGGAGCCAAAATaGGGTAATATGACATGTTGTGGACTTGAAGGGTGG	+
Preference number: 6 (lower is better) Translates to: IQVLQNSPREPK*GNMTCCGLEGW Trigger: CCACCCTTCAAGTCCACAACATGTCATATTACCTCATTTTGGCTCCCTGGGACTATTTTGGAGGACCTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412722.1

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