Pregenerated sensors for LINC00423 (Homo sapiens)
Ensembl gene IDs: ENSG00000226968Ensembl transcript IDs: ENST00000421002.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTTGGTGGACCAACTCAAGCAACGGTGCATCTCCACCTGGTATTGTaGTGTGGCAGGTCTATGTGGCAAGGGTTTTGTCTCCGTACTCTG | + |
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Preference number: 5 (lower is better) Translates to: LGGPTQATVHLHLVL*CGRSMWQGFCLRTL Trigger: CAGAGTACGGAGACAAAACCCTTGCCACATAGACCTGCCACACCACAATACCAGGTGGAGATGCACCGTTGCTTGAGTTGGTCCACCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CCA 90 bp | GCAACGGTGCATCTCCACCTGGTATTGTGGTGTGGCAGGTCTATGTaGCAAGGGTTTTGTCTCCGTACTCTGGGTGAAGGTGTTGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: ATVHLHLVLWCGRSM*QGFCLRTLGEGVED Trigger: ATCTTCAACACCTTCACCCAGAGTACGGAGACAAAACCCTTGCCACATAGACCTGCCACACCACAATACCAGGTGGAGATGCACCGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CCA 90 bp | GCAACTTTCTTGGTGGACCAACTCAAGCAACGGTGCATCTCCACCTaGTATTGTGGTGTGGCAGGTCTATGTGGCAAGGGTTTTGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: ATFLVDQLKQRCIST*YCGVAGLCGKGFVS Trigger: GGAGACAAAACCCTTGCCACATAGACCTGCCACACCACAATACCAGGTGGAGATGCACCGTTGCTTGAGTTGGTCCACCAAGAAAGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS GCA 90 bp | AGCCTCCTAACTGTCTGGTCTGTGGATCAGGTGCCGCAGGTCCTCTaGTCTAGACTATCAATCTTTTCAGCTGGTCATTTGGAGGGCATT | + |
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Preference number: 5 (lower is better) Translates to: SLLTVWSVDQVPQVL*SRLSIFSAGHLEGI Trigger: AATGCCCTCCAAATGACCAGCTGAAAAGATTGATAGTCTAGAGCAGAGGACCTGCGGCACCTGATCCACAGACCAGACAGTTAGGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CCA 90 bp | AGACAGGTGCAGCAGCAACCCATCATACCATGGAATTATTACATTTaGGACCTGGGCATCTCTTGGCCTCCCAAAGTGTTGATTACAGGC | + |
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Preference number: 5 (lower is better) Translates to: RQVQQQPIIPWNYYI*DLGISWPPKVLITG Trigger: GCCTGTAATCAACACTTTGGGAGGCCAAGAGATGCCCAGGTCCCAAATGTAATAATTCCATGGTATGATGGGTTGCTGCTGCACCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS GCA 72 bp | CAGCTGGTCATTTGGAGGGCATTACAGGGCAAACCATaGGCAGTTGAGACCAATTGCCTGTGCCCATGGGCA | + |
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Preference number: 6 (lower is better) Translates to: QLVIWRALQGKP*AVETNCLCPWA Trigger: TGCCCATGGGCACAGGCAATTGGTCTCAACTGCGCATGGTTTGCCCTGTAATGCCCTCCAAATGACCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CCA 72 bp | TTGGTGGACCAACTCAAGCAACGGTGCATCTCCACCTaGTATTGTGGTGTGGCAGGTCTATGTGGCAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LVDQLKQRCIST*YCGVAGLCGKG Trigger: ACCCTTGCCACATAGACCTGCCACACCACAATACCAGGTGGAGATGCACCGTTGCTTGAGTTGGTCCACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CAA 72 bp | GGCAAGGGTTTTGTCTCCGTACTCTGGGTGAAGGTGTaGAAGATGATCCTGAGGCCTCAGTTCTCTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: GKGFVSVLWVKV*KMILRPQFSGG Trigger: CCCTCCAGAGAACTGAGGCCTCAGGATCATCTTCAACACCTTCACCCAGAGTACGGAGACAAAACCCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CAA 90 bp | GGTCTATGTGGCAAGGGTTTTGTCTCCGTACTCTGGGTGAAGGTGTaGAAGATGATCCTGAGGCCTCAGTTCTCTGGAGGGAGTCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: GLCGKGFVSVLWVKV*KMILRPQFSGGSLA Trigger: CGCAAGACTCCCTCCAGAGAACTGAGGCCTCAGGATCATCTTCAACACCTTCACCCAGAGTACGGAGACAAAACCCTTGCCACATAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CCA 72 bp | GCAGGTCTATGTGGCAAGGGTTTTGTCTCCGTACTCTaGGTGAAGGTGTTGAAGATGATCCTGAGGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: AGLCGKGFVSVL*VKVLKMILRPQ Trigger: CTGAGGCCTCAGGATCATCTTCAACACCTTCACCCAGAGTACGGAGACAAAACCCTTGCCACATAGACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CCA 72 bp | CATCTCCACCTGGTATTGTGGTGTGGCAGGTCTATGTaGCAAGGGTTTTGTCTCCGTACTCTGGGTGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: HLHLVLWCGRSM*QGFCLRTLGEG Trigger: ACCTTCACCCAGAGTACGGAGACAAAACCCTTGCCACATAGACCTGCCACACCACAATACCAGGTGGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CCA 72 bp | TCAAGCAACGGTGCATCTCCACCTGGTATTGTGGTGTaGCAGGTCTATGTGGCAAGGGTTTTGTCTCCGTAC | + |
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Preference number: 6 (lower is better) Translates to: SSNGASPPGIVV*QVYVARVLSPY Trigger: GTACGGAGACAAAACCCTTGCCACATAGACCTGCCACACCACAATACCAGGTGGAGATGCACCGTTGCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CCA 72 bp | CCAACTCAAGCAACGGTGCATCTCCACCTGGTATTGTaGTGTGGCAGGTCTATGTGGCAAGGGTTTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PTQATVHLHLVL*CGRSMWQGFCL Trigger: GAGACAAAACCCTTGCCACATAGACCTGCCACACCACAATACCAGGTGGAGATGCACCGTTGCTTGAGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CAA 72 bp | GGACCAACTCAAGCAACGGTGCATCTCCACCTGGTATaGTGGTGTGGCAGGTCTATGTGGCAAGGGTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: GPTQATVHLHLV*WCGRSMWQGFC Trigger: ACAAAACCCTTGCCACATAGACCTGCCACACCACAATACCAGGTGGAGATGCACCGTTGCTTGAGTTGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CAA 90 bp | TTTCTTGGTGGACCAACTCAAGCAACGGTGCATCTCCACCTGGTATaGTGGTGTGGCAGGTCTATGTGGCAAGGGTTTTGTCTCCGTACT | + |
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Preference number: 6 (lower is better) Translates to: FLGGPTQATVHLHLV*WCGRSMWQGFCLRT Trigger: AGTACGGAGACAAAACCCTTGCCACATAGACCTGCCACACCACAATACCAGGTGGAGATGCACCGTTGCTTGAGTTGGTCCACCAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CAA 90 bp | CGCCTGGCCCTGGATGGAGCTTTCATAGAGGAGGAGCAGATGGAGTaGTCAAGGCAAAAATGTCCACTTTCAGCCACGTTTGCCATTTTC | + |
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Preference number: 6 (lower is better) Translates to: RLALDGAFIEEEQME*SRQKCPLSATFAIF Trigger: GAAAATGGCAAACGTGGCTGAAAGTGGACATTTTTGCCTTGACAACTCCATCTGCTCCTCCTCTATGAAAGCTCCATCCAGGGCCAGGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS GCA 72 bp | ATGGCAACTTTCTTGGTGGACCAACTCAAGCAACGGTaGATCTCCACCTGGTATTGTGGTGTGGCAGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: MATFLVDQLKQR*ISTWYCGVAGL Trigger: TAGACCTGCCACACCACAATACCAGGTGGAGATGCACCGTTGCTTGAGTTGGTCCACCAAGAAAGTTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CAA 90 bp | CAGACAGGTGCAGCAGCAACCCATCATACCATGGAATTATTACATTaGGGACCTGGGCATCTCTTGGCCTCCCAAAGTGTTGATTACAGG | + |
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Preference number: 6 (lower is better) Translates to: QTGAAATHHTMELLH*GPGHLLASQSVDYR Trigger: CCTGTAATCAACACTTTGGGAGGCCAAGAGATGCCCAGGTCCCAAATGTAATAATTCCATGGTATGATGGGTTGCTGCTGCACCTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CCA 72 bp | CAGCAGCAACCCATCATACCATGGAATTATTACATTTaGGACCTGGGCATCTCTTGGCCTCCCAAAGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: QQQPIIPWNYYI*DLGISWPPKVL Trigger: CAACACTTTGGGAGGCCAAGAGATGCCCAGGTCCCAAATGTAATAATTCCATGGTATGATGGGTTGCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CAA 72 bp | GCAGCAGCAACCCATCATACCATGGAATTATTACATTaGGGACCTGGGCATCTCTTGGCCTCCCAAAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: AAATHHTMELLH*GPGHLLASQSV Trigger: AACACTTTGGGAGGCCAAGAGATGCCCAGGTCCCAAATGTAATAATTCCATGGTATGATGGGTTGCTGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CCA 72 bp | CAAATCAGACAGGTGCAGCAGCAACCCATCATACCATaGAATTATTACATTTGGGACCTGGGCATCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: QIRQVQQQPIIP*NYYIWDLGISW Trigger: CCAAGAGATGCCCAGGTCCCAAATGTAATAATTCCATGGTATGATGGGTTGCTGCTGCACCTGTCTGATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CCA 72 bp | CACAGCCTGAACTCAATTAATTTTCACAGCCCACTGTaGAGGTGGAGAGGGAAGTGCCATATATTTTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: HSLNSINFHSPL*RWRGKCHIFLQ Trigger: CTGCAAAAATATATGGCACTTCCCTCTCCACCTCCACAGTGGGCTGTGAAAATTAATTGAGTTCAGGCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CCA 72 bp | CACTTCCTTATAAGCTGTCGTAACTTCAGGCTTCTATaGCAACTTTCTTGGTGGACCAACTCAAGCAACGGT | + |
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Preference number: 6 (lower is better) Translates to: HFLISCRNFRLL*QLSWWTNSSNG Trigger: ACCGTTGCTTGAGTTGGTCCACCAAGAAAGTTGCCATAGAAGCCTGAAGTTACGACAGCTTATAAGGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CAA 90 bp | TGTGATAACCTGTCATTGATCACTCATTTGATGAACACCAAAACTTaGCCTGCACTTCTGGGAGGACAAAGAAGCCTCCTAACTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: CDNLSLITHLMNTKT*PALLGGQRSLLTVW Trigger: CCAGACAGTTAGGAGGCTTCTTTGTCCTCCCAGAAGTGCAGGCAAAGTTTTGGTGTTCATCAAATGAGTGATCAATGACAGGTTATCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CAA 72 bp | CTGTCATTGATCACTCATTTGATGAACACCAAAACTTaGCCTGCACTTCTGGGAGGACAAAGAAGCCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: LSLITHLMNTKT*PALLGGQRSLL Trigger: TAGGAGGCTTCTTTGTCCTCCCAGAAGTGCAGGCAAAGTTTTGGTGTTCATCAAATGAGTGATCAATGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CCA 72 bp | TGGATGAAAAGTGAAGTCATTATTGGGCATGACATCTaGTGTTTCAGTCCCAAGGCCACAAGCAGAATGTTA | + |
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Preference number: 6 (lower is better) Translates to: WMKSEVIIGHDI*CFSPKATSRML Trigger: TAACATTCTGCTTGTGGCCTTGGGACTGAAACACCAGATGTCATGCCCAATAATGACTTCACTTTTCATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CAA 90 bp | ATATATTTTTGCAGTAGGTGTGATAACCTGTCATTGATCACTCATTaGATGAACACCAAAACTTTGCCTGCACTTCTGGGAGGACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: IYFCSRCDNLSLITH*MNTKTLPALLGGQR Trigger: TCTTTGTCCTCCCAGAAGTGCAGGCAAAGTTTTGGTGTTCATCAAATGAGTGATCAATGACAGGTTATCACACCTACTGCAAAAATATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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| CDS CAA 72 bp | GCCATATATTTTTGCAGTAGGTGTGATAACCTGTCATaGATCACTCATTTGATGAACACCAAAACTTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: AIYFCSRCDNLS*ITHLMNTKTLP Trigger: AGGCAAAGTTTTGGTGTTCATCAAATGAGTGATCAATGACAGGTTATCACACCTACTGCAAAAATATATGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421002.1 |
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