Pregenerated sensors for LINC00269 (Homo sapiens)
Ensembl gene IDs: ENSG00000215162Ensembl transcript IDs: ENST00000399711.1, ENST00000654300.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGAAACATGAGCCTGGAGCCACGCAATGGTGAGCAAAGCCTGCCATaGACCCTGCTCTCAAGAAGCTCCCGAGCTGGCGAGCTGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: GNMSLEPRNGEQSLP*TLLSRSSRAGELAG Trigger: CCCCGCCAGCTCGCCAGCTCGGGAGCTTCTTGAGAGCAGGGTCCATGGCAGGCTTTGCTCACCATTGCGTGGCTCCAGGCTCATGTTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS GCA 90 bp | GGGAAACAAGAGTCACGGGATGGCAAGCTGGCCTGGCCTTTACTCTaGAGAATCCAGTCCCCTCCTGGCCCAGTTGGAAAGGGCAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: GKQESRDGKLAWPLL*RIQSPPGPVGKGKA Trigger: AGCCTTGCCCTTTCCAACTGGGCCAGGAGGGGACTGGATTCTGCAGAGTAAAGGCCAGGCCAGCTTGCCATCCCGTGACTCTTGTTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654300.1 |
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| CDS CCA 90 bp | GAGGATCACTTGAGCTCGGGAGGTCAACGATGCAATGAGCCAAGATaGCACCACTCCACTCCACTCGGGGTAATAGAGCAAGACCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: EDHLSSGGQRCNEPR*HHSTPLGVIEQDPG Trigger: CCCAGGGTCTTGCTCTATTACCCCGAGTGGAGTGGAGTGGTGCCATCTTGGCTCATTGCATCGTTGACCTCCCGAGCTCAAGTGATCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS TCA 90 bp | TGCAGACAAATGCCTTGTGGCACATGTGCGGACGTGGCTGTTCACTaGTCAAATATGGAGCCTGGGTCCAACTGTGGGCAGGAGGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: CRQMPCGTCADVAVH*SNMEPGSNCGQEEH Trigger: GTGCTCCTCCTGCCCACAGTTGGACCCAGGCTCCATATTTGATCAGTGAACAGCCACGTCCGCACATGTGCCACAAGGCATTTGTCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CCA 90 bp | TGCCTTGTGGCACATGTGCGGACGTGGCTGTTCACTGATCAAATATaGAGCCTGGGTCCAACTGTGGGCAGGAGGAGCACATCTCATTGG | + |
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Preference number: 5 (lower is better) Translates to: CLVAHVRTWLFTDQI*SLGPTVGRRSTSHW Trigger: CCAATGAGATGTGCTCCTCCTGCCCACAGTTGGACCCAGGCTCCATATTTGATCAGTGAACAGCCACGTCCGCACATGTGCCACAAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CCA 90 bp | CTGACCAAATACATCCATGGAACCTTCAGCTGCATCTGGCTGTGGTaGTGTGTGCCTGTAGTCCCGAAAAGTGGGAGGCTGAGGTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LTKYIHGTFSCIWLW*CVPVVPKSGRLRWE Trigger: CTCCCACCTCAGCCTCCCACTTTTCGGGACTACAGGCACACACCACCACAGCCAGATGCAGCTGAAGGTTCCATGGATGTATTTGGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654300.1 |
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| CDS TCA 90 bp | CAGAGGGAGAAGACAGAGCTTAGGTGGCCCCCAGAGGCAGCACTGTaGCCAATGGATGGAAGCCACAAAGAGACAGAGTTCAGCCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: QREKTELRWPPEAAL*PMDGSHKETEFSPK Trigger: TTTTGGGCTGAACTCTGTCTCTTTGTGGCTTCCATCCATTGGTCACAGTGCTGCCTCTGGGGGCCACCTAAGCTCTGTCTTCTCCCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS CCA 90 bp | ACCAGAGTCACACTGGAGCATGACCAGGGAGGCAAAAGCATGCTGTaGAGAAAGCGGGGGCCCTGGTCTCATGAAGAACAGTTGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: TRVTLEHDQGGKSML*RKRGPWSHEEQLKE Trigger: TTCCTTCAACTGTTCTTCATGAGACCAGGGCCCCCGCTTTCTCCACAGCATGCTTTTGCCTCCCTGGTCATGCTCCAGTGTGACTCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS CCA 90 bp | GGTGTCAGCTCTGTGTGCCACATATTAAGGGTACCAGAGTCACACTaGAGCATGACCAGGGAGGCAAAAGCATGCTGTGGAGAAAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: GVSSVCHILRVPESH*SMTREAKACCGESG Trigger: CCCGCTTTCTCCACAGCATGCTTTTGCCTCCCTGGTCATGCTCCAGTGTGACTCTGGTACCCTTAATATGTGGCACACAGAGCTGACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS CCA 90 bp | CTTGCCCCCTCTCCCATCGGTCAACCATCAACTTCTAGATGTACTTaGTGTTTCCTTCAGGCTCCTGGGGCCACATGGCAGCATAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: LAPSPIGQPSTSRCT*CFLQAPGATWQHRG Trigger: TCCTCTATGCTGCCATGTGGCCCCAGGAGCCTGAAGGAAACACCAAGTACATCTAGAAGTTGATGGTTGACCGATGGGAGAGGGGGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS TCA 90 bp | GCAAGGGGGAACCAGGTGAGAGGGCAAGGAGCAGAGGTGAGGAGGTaGCTGTCATATGCATGGTCTGACCAAATACATCCATGGAACCTT | + |
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Preference number: 5 (lower is better) Translates to: ARGNQVRGQGAEVRR*LSYAWSDQIHPWNL Trigger: AAGGTTCCATGGATGTATTTGGTCAGACCATGCATATGACAGTCACCTCCTCACCTCTGCTCCTTGCCCTCTCACCTGGTTCCCCCTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS TCA 90 bp | AGGAGGCTGATTTCTGACCTCCAGGCATCTGTCAAGGTCTCCGGATaGATTTGCAGACAAATGCCTTGTGGCACATGTGCGGACGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: RRLISDLQASVKVSG*ICRQMPCGTCADVA Trigger: AGCCACGTCCGCACATGTGCCACAAGGCATTTGTCTGCAAATTCATCCGGAGACCTTGACAGATGCCTGGAGGTCAGAAATCAGCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CCA 90 bp | CCGGATGAATTTGCAGACAAATGCCTTGTGGCACATGTGCGGACGTaGCTGTTCACTGATCAAATATGGAGCCTGGGTCCAACTGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: PDEFADKCLVAHVRT*LFTDQIWSLGPTVG Trigger: GCCCACAGTTGGACCCAGGCTCCATATTTGATCAGTGAACAGCCACGTCCGCACATGTGCCACAAGGCATTTGTCTGCAAATTCATCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS TCA 90 bp | AGGGCAAGGAGCAGAGGTGAGGAGGTGACTGTCATATGCATGGTCTaGCCAAATACATCCATGGAACCTTCAGCTGCATCTGTAGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: RARSRGEEVTVICMV*PNTSMEPSAASVGS Trigger: ACTGCCTACAGATGCAGCTGAAGGTTCCATGGATGTATTTGGTCAGACCATGCATATGACAGTCACCTCCTCACCTCTGCTCCTTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS CCA 90 bp | GGACGTGGCTGTTCACTGATCAAATATGGAGCCTGGGTCCAACTGTaGGCAGGAGGAGCACATCTCATTGGCTTTCAGAGTCTGTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: GRGCSLIKYGAWVQL*AGGAHLIGFQSLFS Trigger: TGAAAACAGACTCTGAAAGCCAATGAGATGTGCTCCTCCTGCCCACAGTTGGACCCAGGCTCCATATTTGATCAGTGAACAGCCACGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CCA 90 bp | GGCATCTGTCAAGGTCTCCGGATGAATTTGCAGACAAATGCCTTGTaGCACATGTGCGGACGTGGCTGTTCACTGATCAAATATGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: GICQGLRMNLQTNAL*HMCGRGCSLIKYGA Trigger: GGCTCCATATTTGATCAGTGAACAGCCACGTCCGCACATGTGCCACAAGGCATTTGTCTGCAAATTCATCCGGAGACCTTGACAGATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS GCA 90 bp | ACCTCCAGGCATCTGTCAAGGTCTCCGGATGAATTTGCAGACAAATaGCTTGTGGCACATGTGCGGACGTGGCTGTTCACTGATCAAATA | + |
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Preference number: 5 (lower is better) Translates to: TSRHLSRSPDEFADK*LVAHVRTWLFTDQI Trigger: TATTTGATCAGTGAACAGCCACGTCCGCACATGTGCCACAAGGCATTTGTCTGCAAATTCATCCGGAGACCTTGACAGATGCCTGGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS GCA 90 bp | AGAGAGGTGAAAGGTCTGGCCAAGGGTGTCAGGACTCGGCTCTCCTaGCTCCATCATAACACATGTCAGGAATTTTTGTTAAGTTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: REVKGLAKGVRTRLS*LHHNTCQEFLLSLC Trigger: ACACAAACTTAACAAAAATTCCTGACATGTGTTATGATGGAGGCAGGAGAGCCGAGTCCTGACACCCTTGGCCAGACCTTTCACCTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654300.1 |
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| CDS TCA 90 bp | TGCATCTGTAGGCAGTATAGAAGTAAAGTTTCAAGAACAAGGAGGTaGCAGACTGCCCTGGAATATGGTGTCAGCTCTGTGTGCCACATA | + |
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Preference number: 5 (lower is better) Translates to: CICRQYRSKVSRTRR*QTALEYGVSSVCHI Trigger: TATGTGGCACACAGAGCTGACACCATATTCCAGGGCAGTCTGTCACCTCCTTGTTCTTGAAACTTTACTTCTATACTGCCTACAGATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS CCA 90 bp | CATGAGGGCAGGGTCTATGGCTTGTCATTTTTGCCACTGTATCCCTaGTTCCTAGAACAATGCTTGTTGTATAGTAGGTATCCAATACAT | + |
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Preference number: 5 (lower is better) Translates to: HEGRVYGLSFLPLYP*FLEQCLLYSRYPIH Trigger: ATGTATTGGATACCTACTATACAACAAGCATTGTTCTAGGAACCAGGGATACAGTGGCAAAAATGACAAGCCATAGACCCTGCCCTCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS TCA 90 bp | TTTCTTTTTCCATCTGTTTCAAGTCTCCTCTGCCTCCCTCTTATGTaGTTGCATTTAGAAACCCTTAACTTGATCACATCTGCCAAGATC | + |
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Preference number: 5 (lower is better) Translates to: FLFPSVSSLLCLPLM*LHLETLNLITSAKI Trigger: GATCTTGGCAGATGTGATCAAGTTAAGGGTTTCTAAATGCAATCACATAAGAGGGAGGCAGAGGAGACTTGAAACAGATGGAAAAAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS GCA 72 bp | AGCCACGCAATGGTGAGCAAAGCCTGCCATGGACCCTaGTCTCAAGAAGCTCCCGAGCTGGCGAGCTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SHAMVSKACHGP*SQEAPELASWR Trigger: CCGCCAGCTCGCCAGCTCGGGAGCTTCTTGAGAGCAGGGTCCATGGCAGGCTTTGCTCACCATTGCGTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS TCA 72 bp | TCCTGGCCCAGTTGGAAAGGGCAAGGCTCAGAGAGGTaGAAGGTCTGGCCAAGGGTGTCAGGACTCGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SWPSWKGQGSER*KVWPRVSGLGS Trigger: AGAGCCGAGTCCTGACACCCTTGGCCAGACCTTTCACCTCTCTGAGCCTTGCCCTTTCCAACTGGGCCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654300.1 |
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| CDS TCA 72 bp | GGAGGATCACTTGAGCTCGGGAGGTCAACGATGCAATaGGCCAAGATGGCACCACTCCACTCCACTCGGGGT | + |
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Preference number: 6 (lower is better) Translates to: GGSLELGRSTMQ*AKMAPLHSTRG Trigger: ACCCCGAGTGGAGTGGAGTGGTGCCATCTTGGCTCATTGCATCGTTGACCTCCCGAGCTCAAGTGATCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS GCA 72 bp | GAGTCACACTGGAGCATGACCAGGGAGGCAAAAGCATaGTGTGGAGAAAGCGGGGGCCCTGGTCTCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: ESHWSMTREAKA*CGESGGPGLMK Trigger: CTTCATGAGACCAGGGCCCCCGCTTTCTCCACAGCATGCTTTTGCCTCCCTGGTCATGCTCCAGTGTGACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS CCA 72 bp | ACACTGGAGCATGACCAGGGAGGCAAAAGCATGCTGTaGAGAAAGCGGGGGCCCTGGTCTCATGAAGAACAG | + |
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Preference number: 6 (lower is better) Translates to: TLEHDQGGKSML*RKRGPWSHEEQ Trigger: CTGTTCTTCATGAGACCAGGGCCCCCGCTTTCTCCACAGCATGCTTTTGCCTCCCTGGTCATGCTCCAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS CCA 72 bp | GCACATGTGCGGACGTGGCTGTTCACTGATCAAATATaGAGCCTGGGTCCAACTGTGGGCAGGAGGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: AHVRTWLFTDQI*SLGPTVGRRST Trigger: TGTGCTCCTCCTGCCCACAGTTGGACCCAGGCTCCATATTTGATCAGTGAACAGCCACGTCCGCACATGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS TCA 72 bp | CTGGGGCCACATGGCAGCATAGAGGAGGCTGATTTCTaGCCTCCAGGCATCTGTCAAGGTCTCCGGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: LGPHGSIEEADF*PPGICQGLRMN Trigger: ATTCATCCGGAGACCTTGACAGATGCCTGGAGGTCAGAAATCAGCCTCCTCTATGCTGCCATGTGGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CCA 72 bp | TTGAGCTCGGGAGGTCAACGATGCAATGAGCCAAGATaGCACCACTCCACTCCACTCGGGGTAATAGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: LSSGGQRCNEPR*HHSTPLGVIEQ Trigger: TTGCTCTATTACCCCGAGTGGAGTGGAGTGGTGCCATCTTGGCTCATTGCATCGTTGACCTCCCGAGCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CCA 72 bp | TGCGGACGTGGCTGTTCACTGATCAAATATGGAGCCTaGGTCCAACTGTGGGCAGGAGGAGCACATCTCATT | + |
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Preference number: 6 (lower is better) Translates to: CGRGCSLIKYGA*VQLWAGGAHLI Trigger: AATGAGATGTGCTCCTCCTGCCCACAGTTGGACCCAGGCTCCATATTTGATCAGTGAACAGCCACGTCCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CCA 72 bp | TCTCCCATCGGTCAACCATCAACTTCTAGATGTACTTaGTGTTTCCTTCAGGCTCCTGGGGCCACATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SPIGQPSTSRCT*CFLQAPGATWQ Trigger: CTGCCATGTGGCCCCAGGAGCCTGAAGGAAACACCAAGTACATCTAGAAGTTGATGGTTGACCGATGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CAA 90 bp | GACCAATGGATGGAAGCCACAAAGAGACAGAGTTCAGCCCAAAAGTaGGAGAAAGCAACTTTTGGGCCGGGCACTGTGGCTTACGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: DQWMEATKRQSSAQK*EKATFGPGTVAYAC Trigger: ACAGGCGTAAGCCACAGTGCCCGGCCCAAAAGTTGCTTTCTCCAACTTTTGGGCTGAACTCTGTCTCTTTGTGGCTTCCATCCATTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS GCA 72 bp | CATCTGTCAAGGTCTCCGGATGAATTTGCAGACAAATaGCTTGTGGCACATGTGCGGACGTGGCTGTTCACT | + |
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Preference number: 6 (lower is better) Translates to: HLSRSPDEFADK*LVAHVRTWLFT Trigger: AGTGAACAGCCACGTCCGCACATGTGCCACAAGGCATTTGTCTGCAAATTCATCCGGAGACCTTGACAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CCA 72 bp | TTTGCAGACAAATGCCTTGTGGCACATGTGCGGACGTaGCTGTTCACTGATCAAATATGGAGCCTGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: FADKCLVAHVRT*LFTDQIWSLGP Trigger: TGGACCCAGGCTCCATATTTGATCAGTGAACAGCCACGTCCGCACATGTGCCACAAGGCATTTGTCTGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CAA 72 bp | ATGGAAGCCACAAAGAGACAGAGTTCAGCCCAAAAGTaGGAGAAAGCAACTTTTGGGCCGGGCACTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: MEATKRQSSAQK*EKATFGPGTVA Trigger: AGCCACAGTGCCCGGCCCAAAAGTTGCTTTCTCCAACTTTTGGGCTGAACTCTGTCTCTTTGTGGCTTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS CAA 72 bp | TGTCAAGGTCTCCGGATGAATTTGCAGACAAATGCCTaGTGGCACATGTGCGGACGTGGCTGTTCACTGATC | + |
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Preference number: 6 (lower is better) Translates to: CQGLRMNLQTNA*WHMCGRGCSLI Trigger: GATCAGTGAACAGCCACGTCCGCACATGTGCCACAAGGCATTTGTCTGCAAATTCATCCGGAGACCTTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CAA 90 bp | CCAGGCATCTGTCAAGGTCTCCGGATGAATTTGCAGACAAATGCCTaGTGGCACATGTGCGGACGTGGCTGTTCACTGATCAAATATGGA | + |
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Preference number: 6 (lower is better) Translates to: PGICQGLRMNLQTNA*WHMCGRGCSLIKYG Trigger: TCCATATTTGATCAGTGAACAGCCACGTCCGCACATGTGCCACAAGGCATTTGTCTGCAAATTCATCCGGAGACCTTGACAGATGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS TCA 72 bp | AAGCATGCTGTGGAGAAAGCGGGGGCCCTGGTCTCATaGAGAACAGTTGAAGGAAGTGGAGTTGTTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: KHAVEKAGALVS*RTVEGSGVVLL Trigger: AAGCAAAACAACTCCACTTCCTTCAACTGTTCTTCATGAGACCAGGGCCCCCGCTTTCTCCACAGCATGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS TCA 72 bp | ATTTCTGACCTCCAGGCATCTGTCAAGGTCTCCGGATaGATTTGCAGACAAATGCCTTGTGGCACATGTGCG | + |
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Preference number: 6 (lower is better) Translates to: ISDLQASVKVSG*ICRQMPCGTCA Trigger: CGCACATGTGCCACAAGGCATTTGTCTGCAAATTCATCCGGAGACCTTGACAGATGCCTGGAGGTCAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CCA 72 bp | CAAGGTCTCCGGATGAATTTGCAGACAAATGCCTTGTaGCACATGTGCGGACGTGGCTGTTCACTGATCAAA | + |
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Preference number: 6 (lower is better) Translates to: QGLRMNLQTNAL*HMCGRGCSLIK Trigger: TTTGATCAGTGAACAGCCACGTCCGCACATGTGCCACAAGGCATTTGTCTGCAAATTCATCCGGAGACCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CAA 72 bp | TGGAGAAAGCGGGGGCCCTGGTCTCATGAAGAACAGTaGAAGGAAGTGGAGTTGTTTTGCTTGGAGAAGACT | + |
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Preference number: 6 (lower is better) Translates to: WRKRGPWSHEEQ*KEVELFCLEKT Trigger: AGTCTTCTCCAAGCAAAACAACTCCACTTCCTTCAACTGTTCTTCATGAGACCAGGGCCCCCGCTTTCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS TCA 72 bp | TTTTGCTTGGAGAAGACTCAGGGGTTATGGCTATGGTaGTGCTTCAGACCTCTAAGAAGCTGTTGGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: FCLEKTQGLWLW*CFRPLRSCWRA Trigger: TGCCCTCCAACAGCTTCTTAGAGGTCTGAAGCATCACCATAGCCATAACCCCTGAGTCTTCTCCAAGCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS GCA 72 bp | AAAGGTCTGGCCAAGGGTGTCAGGACTCGGCTCTCCTaGCTCCATCATAACACATGTCAGGAATTTTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: KGLAKGVRTRLS*LHHNTCQEFLL Trigger: TAACAAAAATTCCTGACATGTGTTATGATGGAGGCAGGAGAGCCGAGTCCTGACACCCTTGGCCAGACCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654300.1 |
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| CDS CCA 72 bp | TTCAAGAACAAGGAGGTGACAGACTGCCCTGGAATATaGTGTCAGCTCTGTGTGCCACATATTAAGGGTACC | + |
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Preference number: 6 (lower is better) Translates to: FKNKEVTDCPGI*CQLCVPHIKGT Trigger: GGTACCCTTAATATGTGGCACACAGAGCTGACACCATATTCCAGGGCAGTCTGTCACCTCCTTGTTCTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS CCA 72 bp | ATGAATAAAAGTCTGAGGGAAACAAGAGTCACGGGATaGCAAGCTGGCCTGGCCTTTACTCTGCAGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: MNKSLRETRVTG*QAGLAFTLQNP Trigger: TGGATTCTGCAGAGTAAAGGCCAGGCCAGCTTGCCATCCCGTGACTCTTGTTTCCCTCAGACTTTTATTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654300.1 |
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| CDS CCA 72 bp | CTGGGTCCAACTGTGGGCAGGAGGAGCACATCTCATTaGCTTTCAGAGTCTGTTTTCAAAAACATTCCCATT | + |
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Preference number: 6 (lower is better) Translates to: LGPTVGRRSTSH*LSESVFKNIPI Trigger: AATGGGAATGTTTTTGAAAACAGACTCTGAAAGCCAATGAGATGTGCTCCTCCTGCCCACAGTTGGACCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CAA 72 bp | CCCTGGTCTCATGAAGAACAGTTGAAGGAAGTGGAGTaGTTTTGCTTGGAGAAGACTCAGGGGTTATGGCTA | + |
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Preference number: 6 (lower is better) Translates to: PWSHEEQLKEVE*FCLEKTQGLWL Trigger: TAGCCATAACCCCTGAGTCTTCTCCAAGCAAAACAACTCCACTTCCTTCAACTGTTCTTCATGAGACCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS CAA 90 bp | GTATGTCTCCTCTACATGAAGTTTCATGAGGGCAGGGTCTATGGCTaGTCATTTTTGCCACTGTATCCCTGGTTCCTAGAACAATGCTTG | + |
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Preference number: 6 (lower is better) Translates to: VCLLYMKFHEGRVYG*SFLPLYPWFLEQCL Trigger: CAAGCATTGTTCTAGGAACCAGGGATACAGTGGCAAAAATGACAAGCCATAGACCCTGCCCTCATGAAACTTCATGTAGAGGAGACATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS TCA 72 bp | AGTCTAGGATTCGATCTGCTGTATGTCTCCTCTACATaGAGTTTCATGAGGGCAGGGTCTATGGCTTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SLGFDLLYVSST*SFMRAGSMACH Trigger: ATGACAAGCCATAGACCCTGCCCTCATGAAACTTCATGTAGAGGAGACATACAGCAGATCGAATCCTAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS TCA 72 bp | AGGCAGTATAGAAGTAAAGTTTCAAGAACAAGGAGGTaGCAGACTGCCCTGGAATATGGTGTCAGCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RQYRSKVSRTRR*QTALEYGVSSV Trigger: CACAGAGCTGACACCATATTCCAGGGCAGTCTGTCACCTCCTTGTTCTTGAAACTTTACTTCTATACTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS CAA 72 bp | AAGTTTCATGAGGGCAGGGTCTATGGCTTGTCATTTTaGCCACTGTATCCCTGGTTCCTAGAACAATGCTTG | + |
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Preference number: 6 (lower is better) Translates to: KFHEGRVYGLSF*PLYPWFLEQCL Trigger: CAAGCATTGTTCTAGGAACCAGGGATACAGTGGCAAAAATGACAAGCCATAGACCCTGCCCTCATGAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CAA 90 bp | CTCTCCTGCCTCCATCATAACACATGTCAGGAATTTTTGTTAAGTTaGTGTTCCAGAGGTCTCACTCCACAGCAAGTTCTACCCCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: LSCLHHNTCQEFLLS*CSRGLTPQQVLPQN Trigger: ATTCTGGGGTAGAACTTGCTGTGGAGTGAGACCTCTGGAACACAAACTTAACAAAAATTCCTGACATGTGTTATGATGGAGGCAGGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654300.1 |
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| CDS CAA 90 bp | CTCTACATGAAGTTTCATGAGGGCAGGGTCTATGGCTTGTCATTTTaGCCACTGTATCCCTGGTTCCTAGAACAATGCTTGTTGTATAGT | + |
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Preference number: 6 (lower is better) Translates to: LYMKFHEGRVYGLSF*PLYPWFLEQCLLYS Trigger: ACTATACAACAAGCATTGTTCTAGGAACCAGGGATACAGTGGCAAAAATGACAAGCCATAGACCCTGCCCTCATGAAACTTCATGTAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS TCA 72 bp | CCATCTGTTTCAAGTCTCCTCTGCCTCCCTCTTATGTaGTTGCATTTAGAAACCCTTAACTTGATCACATCT | + |
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Preference number: 6 (lower is better) Translates to: PSVSSLLCLPLM*LHLETLNLITS Trigger: AGATGTGATCAAGTTAAGGGTTTCTAAATGCAATCACATAAGAGGGAGGCAGAGGAGACTTGAAACAGATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS GCA 72 bp | CATGGTCTGACCAAATACATCCATGGAACCTTCAGCTaGATCTGTAGGCAGTATAGAAGTAAAGTTTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: HGLTKYIHGTFS*ICRQYRSKVSR Trigger: TCTTGAAACTTTACTTCTATACTGCCTACAGATGCAGCTGAAGGTTCCATGGATGTATTTGGTCAGACCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399711.1 |
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| CDS GCA 72 bp | TCATTTTTGCCACTGTATCCCTGGTTCCTAGAACAATaGTTGTTGTATAGTAGGTATCCAATACATGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SFLPLYPWFLEQ*LLYSRYPIHAA Trigger: AGCAGCATGTATTGGATACCTACTATACAACAAGCATTGTTCTAGGAACCAGGGATACAGTGGCAAAAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000399711.1 ENST00000654300.1 |
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| CDS CAA 72 bp | CTCCATCATAACACATGTCAGGAATTTTTGTTAAGTTaGTGTTCCAGAGGTCTCACTCCACAGCAAGTTCTA | + |
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Preference number: 6 (lower is better) Translates to: LHHNTCQEFLLS*CSRGLTPQQVL Trigger: TAGAACTTGCTGTGGAGTGAGACCTCTGGAACACAAACTTAACAAAAATTCCTGACATGTGTTATGATGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654300.1 |
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