Pregenerated sensors for LINC00243 (Homo sapiens)

Ensembl gene IDs: ENSG00000214894

Ensembl transcript IDs: ENST00000399196.1, ENST00000419357.5

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATTTCCGTTCCCAGTCTGAGAGCCAAGCATTTCTTTAAGAAGATCTaGTTTCAGTTGAAGGGAAATGATAGACTGCCAGAGATGCTTGTT	+
Preference number: 5 (lower is better) Translates to: ISVPSLRAKHFFKKI*FQLKGNDRLPEMLV Trigger: AACAAGCATCTCTGGCAGTCTATCATTTCCCTTCAACTGAAATCAGATCTTCTTAAAGAAATGCTTGGCTCTCAGACTGGGAACGGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419357.5
CDS CAA 72 bp	GACTGCCAGAGATGCTTGTTGCTGCTGGATTGGTTCTaGTTTCTAGGGCCTCTCTCCCCTGGCAGAGAACCC	+
Preference number: 6 (lower is better) Translates to: DCQRCLLLLDWF*FLGPLSPGREP Trigger: GGGTTCTCTGCCAGGGGAGAGAGGCCCTAGAAACAAGAACCAATCCAGCAGCAACAAGCATCTCTGGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419357.5
CDS CCA 72 bp	GTTCTTGACCCTGTGTGCCTGTGGGGTGTGTGTGTGTaGTGTGTGTGTGTGTGTGTATGTGCACACAGTCAT	+
Preference number: 6 (lower is better) Translates to: VLDPVCLWGVCV*CVCVCVCAHSH Trigger: ATGACTGTGTGCACATACACACACACACACACACCACACACACACACCCCACAGGCACACAGGGTCAAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399196.1
CDS TCA 72 bp	GTGATGTCTGAAGGCAGAGCAACCATCTTGCACATGTaGCATAGAAAGGTAGATGTGAAGACATCTAGCAGG	+
Preference number: 6 (lower is better) Translates to: VMSEGRATILHM*HRKVDVKTSSR Trigger: CCTGCTAGATGTCTTCACATCTACCTTTCTATGTCACATGTGCAAGATGGTTGCTCTGCCTTCAGACATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399196.1
CDS CAA 72 bp	ATCGTCCTCTTCTCCTTCAACCATGGAAACTTGATTTaGTCTGTGGCATCCATGTGCCTCTTTGAAACACTC	+
Preference number: 6 (lower is better) Translates to: IVLFSFNHGNLI*SVASMCLFETL Trigger: GAGTGTTTCAAAGAGGCACATGGATGCCACAGACAAAATCAAGTTTCCATGGTTGAAGGAGAAGAGGACGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399196.1
CDS CAA 90 bp	TTCCAATGTCCTTTAGTTAAGTACTCATCGCCATACTTTGGGGTATaGTGTTCTGAACCCCAACAGAAACAACTCACTCTCTCGGCATCA	+
Preference number: 6 (lower is better) Translates to: FQCPLVKYSSPYFGV*CSEPQQKQLTLSAS Trigger: TGATGCCGAGAGAGTGAGTTGTTTCTGTTGGGGTTCAGAACACAATACCCCAAAGTATGGCGATGAGTACTTAACTAAAGGACATTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399196.1
CDS TCA 72 bp	CCCAGTCTGAGAGCCAAGCATTTCTTTAAGAAGATCTaGTTTCAGTTGAAGGGAAATGATAGACTGCCAGAG	+
Preference number: 6 (lower is better) Translates to: PSLRAKHFFKKI*FQLKGNDRLPE Trigger: CTCTGGCAGTCTATCATTTCCCTTCAACTGAAATCAGATCTTCTTAAAGAAATGCTTGGCTCTCAGACTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419357.5
CDS TCA 72 bp	GAGCCAAGCATTTCTTTAAGAAGATCTGATTTCAGTTaGAGGGAAATGATAGACTGCCAGAGATGCTTGTTG	+
Preference number: 6 (lower is better) Translates to: EPSISLRRSDFS*REMIDCQRCLL Trigger: CAACAAGCATCTCTGGCAGTCTATCATTTCCCTTCAACTGAAATCAGATCTTCTTAAAGAAATGCTTGGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419357.5

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