RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LIMA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000050405

Ensembl transcript IDs: ENST00000341247.8, ENST00000394943.7, ENST00000547825.5, ENST00000549064.1, ENST00000550592.1, ENST00000550611.1, ENST00000551486.1, ENST00000551691.5, ENST00000552008.5, ENST00000552045.1, ENST00000552338.5, ENST00000552491.5, ENST00000552720.5, ENST00000552783.5, ENST00000552823.5, ENST00000552909.5

Found 860 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGCTGATGTGAAACACCTGCTGGTTGGCCAAGAGACGCTCCATTaGATAGACTGTCTTCTGACATTCCACGCAGGTCTCTCTTGCAGG +
Preference number: 1 (lower is better)
Translates to: AADVKHLLVGQETLH*IDCLLTFHAGLSCR
Trigger: CCTGCAAGAGAGACCTGCGTGGAATGTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTGGCCAACCAGCAGGTGTTTCACATCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR CCA 90 bp TGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTaGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTGCA +
Preference number: 1 (lower is better)
Translates to: CWDTCLCASHFDKGQ*LANTNMNLRPSIIA
Trigger: TGCAATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
3UTR TCA 90 bp CATAATACCGATTTCTCTTTATCTGTTCTTCCACAGAGAGCTCTTTaGCCACTTCTCCCTCCCAGAGTTCCACATCCTGGGATTTCTGAT +
Preference number: 1 (lower is better)
Translates to: HNTDFSLSVLPQRAL*PLLPPRVPHPGISD
Trigger: ATCAGAAATCCCAGGATGTGGAACTCTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGGAAGAACAGATAAAGAGAAATCGGTATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR CCA 90 bp GGTGTTGTCTACAAAACTCGACCAATTCAGAGACTTGGGTTCTTGTaGAGATTGTTGTTTGAGGAAGCTGTTATCATCTTCATCGGAGTC +
Preference number: 1 (lower is better)
Translates to: GVVYKTRPIQRLGFL*RLLFEEAVIIFIGV
Trigger: GACTCCGATGAAGATGATAACAGCTTCCTCAAACAACAATCTCCACAAGAACCCAAGTCTCTGAATTGGTCGAGTTTTGTAGACAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR GCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTaGTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAAC +
Preference number: 1 (lower is better)
Translates to: FQSYFQVNYISCWDT*LCASHFDKGQWLAN
Trigger: GTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
3UTR GCA 90 bp TGGAGATTGTTGTTTGAGGAAGCTGTTATCATCTTCATCGGAGTCTaGACCATTTTCTACAAGATTCTCATTCTCCATCTCCAAACTATG +
Preference number: 1 (lower is better)
Translates to: WRLLFEEAVIIFIGV*TIFYKILILHLQTM
Trigger: CATAGTTTGGAGATGGAGAATGAGAATCTTGTAGAAAATGGTGCAGACTCCGATGAAGATGATAACAGCTTCCTCAAACAACAATCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR CCA 90 bp TCATCTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTaGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACA +
Preference number: 1 (lower is better)
Translates to: SSVYLNIAFWEYSRI*AIIRWNISPVTSLT
Trigger: TGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR GCA 90 bp CCAGCCTTTCCTGATAGGTGGGGACACAGTTTTTGGGCTCTTGACAGAGGTGCTGGTCTCTCTTGCAGGTaGCTGAAACTTATTAGGAGG +
Preference number: 2 (lower is better)
Translates to: PAFPDRWGHSFWALDRGAGLSCR*LKLIRR
Trigger: CCTCCTAATAAGTTTCAGGCACCTGCAAGAGAGACC...AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR GCA 90 bp TCGTCTTCAGGAGGCCATTTGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCACTTGGCTTCCATACTTaGAGCCAGGACACCCACCTT +
Preference number: 2 (lower is better)
Translates to: SSSGGHLGFDILIPSSKALGFHT*SQDTHL
Trigger: AAGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAG...TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CCA 90 bp CCAGCCTTTCCTGATAGGTGGGGACACAGTTTTTGGGCTCTTGACAGAGGTGCTCGATCCTCAGCTTCTTaGTTTCAGCTGGCTTGTCTT +
Preference number: 2 (lower is better)
Translates to: PAFPDRWGHSFWALDRGARSSAS*FQLACL
Trigger: AAGACAAGCCAGCTGAAACCAAGAAGCTGAGGATCG...AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR CAA 90 bp TCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCAGGAGGCCATTaGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCACTTCCTGAA +
Preference number: 2 (lower is better)
Translates to: SSGTSGLLISSSGGH*GFDILIPSSKALPE
Trigger: TTCAGGAAGTGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR CAA 90 bp GGCTTGCTGATTTCGTCTTCAGGAGGCCATTTGGGCTTTGACATTTaGATCCCTTCCTCCAAGGCACTTCCTGAACTTCCAAGTTCAGTG +
Preference number: 2 (lower is better)
Translates to: GLLISSSGGHLGFDI*IPSSKALPELPSSV
Trigger: CACTGAACTTGGAAGTTCAGGAAGTGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGACGAAATCAGCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR TCA 90 bp TTCAGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCAAGCAACGGAAGCAGCTaGTGTGAAACACCTGCTGGT +
Preference number: 2 (lower is better)
Translates to: FRSRSTSSGTSGLLISSSSNGSS*CETPAG
Trigger: ACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGCT...TGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR GCA 90 bp GAATTCTTCAGCAAAGGTGTTGTCTACAAAACTCGACCAATTCAGAGACTTGGGGTGAGGGGTCTCCCTTaGATTTGCAAGCTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: EFFSKGVVYKTRPIQRLGVRGLP*ICKLGW
Trigger: CCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCAC...CCCAAGTCTCTGAATTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CCA 90 bp TCGTCTTCAGGAGGCCATTTGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCACAAGAGACGCTCCATTaGATAGACTGTCTTCTGACA +
Preference number: 2 (lower is better)
Translates to: SSSGGHLGFDILIPSSKAQETLH*IDCLLT
Trigger: TGTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTG...TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CCA 90 bp AGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCAGGACTTGCATTTGCAAGCTaGGCTGGTCTCTCCAAAATC +
Preference number: 2 (lower is better)
Translates to: RSRSTSSGTSGLLISSSGLAFAS*AGLSKI
Trigger: GATTTTGGAGAGACCAGCCCAGCTTGCAAATGCAAG...TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR CAA 90 bp CTTAGCTTCTTCAGATCTAGATCGACATCCTCAGGAACTTCGGGCTaGCTGATTTCGTCTTCAGGAGGCCATTTGGGCTTTGACATTTTG +
Preference number: 2 (lower is better)
Translates to: LSFFRSRSTSSGTSG*LISSSGGHLGFDIL
Trigger: CAAAATGTCAAAGCCCAAATGGCCTCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCTGAAGAAGCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR TCA 90 bp CATCCTCATCATAATACCGATTTCTCTTTATCTGTTCTTCCACAGAGAGCTCTTCGGAAGCAGCTGATGTaGAACACCTGCTGGTTGGCC +
Preference number: 2 (lower is better)
Translates to: HPHHNTDFSLSVLPQRALRKQLM*NTCWLA
Trigger: GGCCAACCAGCAGGTGTTTCACATCAGCTGCTTCCG...AAGAGCTCTCTGTGGAAGAACAGATAAAGAGAAATCGGTATTATGATGAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CCA 90 bp AGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCAGGAATTTGCAAGCTGGGCTaGTCTCTCCAAAATCTCTTC +
Preference number: 2 (lower is better)
Translates to: RSRSTSSGTSGLLISSSGICKLG*SLQNLF
Trigger: GAAGAGATTTTGGAGAGACCAGCCCAGCTTGCAAAT...TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR TCA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCAATGTGCATCACATTTTaGCAAAGGGCAGTGGCTCGC +
Preference number: 2 (lower is better)
Translates to: RIWAIIRWNISPVTSLTAMCITF*QRAVAR
Trigger: GCGAGCCACTGCCCTTTGTCAAAATGTGATGCACAT...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR TCA 90 bp CCCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTCCTTTCTGCAACTCTATGAAGCTGCTACAGTaGATGGGCGGCTTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: PILLRSLGIFHLFPFCNSMKLLQ*MGGFFP
Trigger: AGGAAAGAAGCCGCCCATTCACTGTAGCAGCTTCAT...AGAGTTGCAGAAAGGAAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR CAA 90 bp CAGCAGATCTCTCTAAGCACCGAAGAGTGTAGGTTGGTTTTTCAATaGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGAG +
Preference number: 2 (lower is better)
Translates to: QQISLSTEECRLVFQ*PQKVLCCIIPQDVE
Trigger: CTCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACACTCTTCGGTGCTTAGAGAGATCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR CAA 90 bp GTCTACAAAACTCGACCAATTCAGAGACTTGGGTTCTTGTGGAGATaGTTGTTTGAGGAAGCTGTTATCATCTTCATCGGAGTCTGCACC +
Preference number: 2 (lower is better)
Translates to: VYKTRPIQRLGFLWR*LFEEAVIIFIGVCT
Trigger: GGTGCAGACTCCGATGAAGATGATAACAGCTTCCTCAAACAACAATCTCCACAAGAACCCAAGTCTCTGAATTGGTCGAGTTTTGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR TCA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAATGTGCATCACATTTTaGCAAAGGGCAGTGGCTCGC +
Preference number: 2 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQMCITF*QRAVAR
Trigger: GCGAGCCACTGCCCTTTGTCAAAATGTGATGCACAT...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CCA 90 bp CCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTCCTTTCTGCAACTCTTGCCTTTCCTGATAGGTaGGGACACAGTTTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: PFFLEALAFSTCFLSATLAFPDR*GHSFWA
Trigger: AGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGC...AAGAGTTGCAGAAAGGAAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR TCA 90 bp CGTTTTCATTTTTGCTTGCCCATAGATCCTTGTGTGGTCTGTGCCCAAAGCCTTCATATGTTCCTAGACTaGGTTTGTTGTTGCAATAGG +
Preference number: 2 (lower is better)
Translates to: RFHFCLPIDPCVVCAQSLHMFLD*VCCCNR
Trigger: CCTATTGCAACAACAAACTCAGTCTAGGAACATATG...AAGGCTTTGGGCACAGACCACACAAGGATCTATGGGCAAGCAAAAATGAAAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR TCA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCAATGTGCATCACATTTTaGCAAAGGGCAGTGGCTCGC +
Preference number: 2 (lower is better)
Translates to: LSTLILPFGNTVESGLLSMCITF*QRAVAR
Trigger: GCGAGCCACTGCCCTTTGTCAAAATGTGATGCACAT...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CCA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGATTTGACAAAGGGCAGTaGCTCGCTAACACTAACATG +
Preference number: 2 (lower is better)
Translates to: GFSIASKSALLYYTSGRRFDKGQ*LANTNM
Trigger: CATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAA...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CCA 90 bp TGTTTTTCCCACATTCCCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTCTTCTTGGTTTCAGCTaGCTTGTCTTCCTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: CFSHIPILLRSLGIFHLFLLGFS*LVFLLL
Trigger: CAGGAGAAGGAAGACAAGCCAGCTGAAACCAAGAAG...AAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGGGAATGTGGGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTAATTACATTTCATGCTaGGATACCTGCTTATGTGCA +
Preference number: 2 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFNYISC*DTCLCA
Trigger: TGCACATAAGCAGGTATCCCAGCATGAAATGTAATT...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTATACAAAAGCTTATTTaGGAGACAGCAGATCTCTCT +
Preference number: 2 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFIQKLI*ETADLS
Trigger: AGAGAGATCTGCTGTCTCCCAAATAAGCTTTTGTAT...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR CAA 90 bp TTATTTGGGAGACAGCAGATCTCTCTAAGCACCGAAGAGTGTAGGTaGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCT +
Preference number: 2 (lower is better)
Translates to: LFGRQQISLSTEECR*VFQLPQKVLCCIIP
Trigger: AGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACACTCTTCGGTGCTTAGAGAGATCTGCTGTCTCCCAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR CAA 90 bp ACACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATaGCAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAA +
Preference number: 2 (lower is better)
Translates to: TRKMGDSDPEGITKI*QLSVIMRSTDITRK
Trigger: TTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTCTTAATATTGCCTTTTaGGAATACAGTAGAATCTGG +
Preference number: 2 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFLNIAF*EYSRIW
Trigger: CCAGATTCTACTGTATTCCCAAAAGGCAATATTAAG...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTTTTGACAAAGGGCAGTaGCTCGCTAACACTAACATG +
Preference number: 2 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCFDKGQ*LANTNM
Trigger: CATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAA...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
3UTR-3UTR CCA 90 bp CATCCTCATCATAATACCGATTTCTCTTTATCTGTTCTTCCACAGAGAGCTCTTAGACTTGGGTTCTTGTaGAGATTGTTGTTTGAGGAA +
Preference number: 2 (lower is better)
Translates to: HPHHNTDFSLSVLPQRALRLGFL*RLLFEE
Trigger: TTCCTCAAACAACAATCTCCACAAGAACCCAAGTCT...AAGAGCTCTCTGTGGAAGAACAGATAAAGAGAAATCGGTATTATGATGAGGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR GCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGTCATGCTGGGATACCTaGTTATGTGCATCACATTTT +
Preference number: 2 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQSCWDT*LCASHF
Trigger: AAAATGTGATGCACATAAGCAGGTATCCCAGCATGA...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR GCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATTCATGCTGGGATACCTaGTTATGTGCATCACATTTT +
Preference number: 2 (lower is better)
Translates to: QLSVIMRSTDITRKESNHSCWDT*LCASHF
Trigger: AAAATGTGATGCACATAAGCAGGTATCCCAGCATGA...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR CAA 90 bp GTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATTaGGAGTACAGTAAATTCACTGGCAGATACAAAAGCTTATTTGGG +
Preference number: 2 (lower is better)
Translates to: VIMRSTDITRKESNH*EYSKFTGRYKSLFG
Trigger: CCCAAATAAGCTTTTGTATCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR GCA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGAAATTGCCTCAAAAAGTaGTCTGTTGTATTATACCTC +
Preference number: 2 (lower is better)
Translates to: DITRKESNHLEYSKFTGRNCLKK*SVVLYL
Trigger: GAGGTATAATACAACAGAGCACTTTTTGAGGCAATT...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATATACAAAAGCTTATTTaGGAGACAGCAGATCTCTCT +
Preference number: 2 (lower is better)
Translates to: QLSVIMRSTDITRKESNHIQKLI*ETADLS
Trigger: AGAGAGATCTGCTGTCTCCCAAATAAGCTTTTGTAT...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATCTTAATATTGCCTTTTaGGAATACAGTAGAATCTGG +
Preference number: 2 (lower is better)
Translates to: QLSVIMRSTDITRKESNHLNIAF*EYSRIW
Trigger: CCAGATTCTACTGTATTCCCAAAAGGCAATATTAAG...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR GCA 72 bp CTTCTCCTGCTGAGAGGAGGCCTTGGCTTCCATACTTaGAGCCAGGACACCCACCTTAGCAATAGGGGCATC +
Preference number: 3 (lower is better)
Translates to: LLLLRGGLGFHT*SQDTHLSNRGI
Trigger: GATGCCCCTATTGCTAAGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAGGCCTCCTCTCAGCAGGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR CCA 72 bp CTTCCTCCAAGGCACTTCCTGAACTTCCAAGTTCAGTaGGGGGTGGCCAGGCGATCCTCAGCTTCTTGGTTT +
Preference number: 3 (lower is better)
Translates to: LPPRHFLNFQVQ*GVARRSSASWF
Trigger: AAACCAAGAAGCTGAGGATCGCCTGGCCACCCCCCACTGAACTTGGAAGTTCAGGAAGTGCCTTGGAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CAA 90 bp AGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCAGGACCTTGGCTTCCATACTaGCAGCCAGGACACCCACCT +
Preference number: 3 (lower is better)
Translates to: RSRSTSSGTSGLLISSSGPWLPY*QPGHPP
Trigger: AGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAGG...TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CAA 90 bp TTCAGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCATGTGAGGGGTCTCCCTaGCATTTGCAAGCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: FRSRSTSSGTSGLLISSSCEGSP*HLQAGL
Trigger: CAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACA...TGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CAA 90 bp TCGTCTTCAGGAGGCCATTTGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCACCAAGAGACGCTCCATaGGATAGACTGTCTTCTGAC +
Preference number: 3 (lower is better)
Translates to: SSSGGHLGFDILIPSSKAPRDAP*DRLSSD
Trigger: GTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTGG...TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CAA 90 bp CCAGCCTTTCCTGATAGGTGGGGACACAGTTTTTGGGCTCTTGACAGAGGTGCTTCTTCAGGAGGCCATTaGGGCTTTGACATTTTGATC +
Preference number: 3 (lower is better)
Translates to: PAFPDRWGHSFWALDRGASSGGH*GFDILI
Trigger: GATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGA...AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR TCA 72 bp GATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTaGTTTCGTCTTCAGGAGGCCATTTGGGCTTTGACA +
Preference number: 3 (lower is better)
Translates to: DLDRHPQELRAC*FRLQEAIWALT
Trigger: TGTCAAAGCCCAAATGGCCTCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CAA 90 bp TTCAGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCATTGGGCTTTGACATTTaGATCCCTTCCTCCAAGGCA +
Preference number: 3 (lower is better)
Translates to: FRSRSTSSGTSGLLISSSLGFDI*IPSSKA
Trigger: TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAA...TGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR TCA 72 bp CACAGTTTTTGGGCTCTTGACAGAGGTGCTTTGAAATaGAGCTGCTACAGTGAATGGGCGGCTTCTTTCCTT +
Preference number: 3 (lower is better)
Translates to: HSFWALDRGALK*SCYSEWAASFL
Trigger: AAGGAAAGAAGCCGCCCATTCACTGTAGCAGCTTCATTTCAAAGCACCTCTGTCAAGAGCCCAAAAACTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CAA 90 bp GGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCTACAAAACTGGGTCTCCCTTGCATTaGCAAGCTGGGCTGGTCTCT +
Preference number: 3 (lower is better)
Translates to: GFLILSSEFFSKGVVYKTGSPLH*QAGLVS
Trigger: AGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCC...AGTTTTGTAGACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR CCA 72 bp ACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTaGCTCGCTAACACTAACATGAATTTAAGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: TCLCASHFDKGQ*LANTNMNLRPS
Trigger: GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
3UTR-3UTR CAA 90 bp GCTAACACTAACATGAATTTAAGGCCCAGCATCATTGCAATTTGTCACTCTTCACCACGCAGGTCTCTCTaGCAGGTGCCTGAAACTTAT +
Preference number: 3 (lower is better)
Translates to: ANTNMNLRPSIIAICHSSPRRSL*QVPETY
Trigger: ATAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTGG...TGAAGAGTGACAAATTGCAATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CAA 90 bp TTCTTTCCTTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATCTTGCCCATAGATCCTaGTGTGGTCTGTGCCCAAAG +
Preference number: 3 (lower is better)
Translates to: FFPSVKKIVLASSDLDRHLAHRS*CGLCPK
Trigger: CTTTGGGCACAGACCACACAAGGATCTATGGGCAAG...ATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAAGGAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CAA 90 bp TTCAGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCACGTTTTCATTTTTGCTaGCCCATAGATCCTTGTGTG +
Preference number: 3 (lower is better)
Translates to: FRSRSTSSGTSGLLISSSRFHFC*PIDPCV
Trigger: CACACAAGGATCTATGGGCAAGCAAAAATGAAAACG...TGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CAA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGACCGAAGAGTGTAGGTaGGTTTTTCAATTGCCTCAA +
Preference number: 3 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQTEECR*VFQLPQ
Trigger: TTGAGGCAATTGAAAAACCAACCTACACTCTTCGGT...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CAA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTACCGAAGAGTGTAGGTaGGTTTTTCAATTGCCTCAA +
Preference number: 3 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFTEECR*VFQLPQ
Trigger: TTGAGGCAATTGAAAAACCAACCTACACTCTTCGGT...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CAA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTTCAAAAAGTGCTCTGTaGTATTATACCTCAGGACGT +
Preference number: 3 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFSKSAL*YYTSGR
Trigger: ACGTCCTGAGGTATAATACAACAGAGCACTTTTTGA...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CAA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGTATGTGCATCACATTTaGACAAAGGGCAGTGGCTCG +
Preference number: 3 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQYVHHI*TKGSGS
Trigger: CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATA...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CAA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTCTGTCTACCTTAATATaGCCTTTTGGGAATACAGTA +
Preference number: 3 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFLSTLI*PFGNTV
Trigger: TACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CAA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACACCGAAGAGTGTAGGTaGGTTTTTCAATTGCCTCAA +
Preference number: 3 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNTEECR*VFQLPQ
Trigger: TTGAGGCAATTGAAAAACCAACCTACACTCTTCGGT...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR GCA 72 bp TACTTCCAAGTAAATTACATTTCATGCTGGGATACCTaGTTATGTGCATCACATTTTGACAAAGGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: YFQVNYISCWDT*LCASHFDKGQW
Trigger: CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
3UTR GCA 72 bp TTGTTTGAGGAAGCTGTTATCATCTTCATCGGAGTCTaGACCATTTTCTACAAGATTCTCATTCTCCATCTC +
Preference number: 3 (lower is better)
Translates to: LFEEAVIIFIGV*TIFYKILILHL
Trigger: GAGATGGAGAATGAGAATCTTGTAGAAAATGGTGCAGACTCCGATGAAGATGATAACAGCTTCCTCAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR-3UTR CAA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGACTGTCTACCTTAATATaGCCTTTTGGGAATACAGTA +
Preference number: 3 (lower is better)
Translates to: GFSIASKSALLYYTSGRRLSTLI*PFGNTV
Trigger: TACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CAA 90 bp TGTTTTTCCCACATTCCCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTTCTTCGTTTTCATTTTaGCTTGCCCATAGATCCTTG +
Preference number: 3 (lower is better)
Translates to: CFSHIPILLRSLGIFHLFSSFSF*LAHRSL
Trigger: CAAGGATCTATGGGCAAGCAAAAATGAAAACGAAGA...AAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGGGAATGTGGGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000552720.5
3UTR CCA 72 bp TACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTaGGCTATTATCAGGTGGAATATTTCCCCAGTTACA +
Preference number: 3 (lower is better)
Translates to: YLNIAFWEYSRI*AIIRWNISPVT
Trigger: TGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CAA 90 bp ATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATACCTGTCTACCTTAATATaGCCTTTTGGGAATACAGTA +
Preference number: 3 (lower is better)
Translates to: ITRKESNHLEYSKFTGRYLSTLI*PFGNTV
Trigger: TACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG...GTATCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CAA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGACTGTCTACCTTAATATaGCCTTTTGGGAATACAGTA +
Preference number: 3 (lower is better)
Translates to: DITRKESNHLEYSKFTGRLSTLI*PFGNTV
Trigger: TACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
3UTR-3UTR CAA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATTCAAAAAGTGCTCTGTaGTATTATACCTCAGGACGT +
Preference number: 3 (lower is better)
Translates to: QLSVIMRSTDITRKESNHSKSAL*YYTSGR
Trigger: ACGTCCTGAGGTATAATACAACAGAGCACTTTTTGA...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp CCCCTGGGCTGTGAGGGGTCTCCCTTGCATTTGCAAGCTGGGCTGGTCTCTCCATGGGGATATCGACCCTaGACGAGGGCTTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PLGCEGSPLHLQAGLVSPWGYRP*TRASGG
Trigger: ACCTCCTGAAGCCCTCGTTCAGGGTCGATATCCCCA...TGGAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACAGCCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp CCCCTGGGCTGTGAGGGGTCTCCCTTGCATTTGCAAGCTGGGCTGGTCTCTCCAAACTTCCAAGTTCAGTaGGGGGTGGCCAGGCGATCC +
Preference number: 4 (lower is better)
Translates to: PLGCEGSPLHLQAGLVSPNFQVQ*GVARRS
Trigger: GGATCGCCTGGCCACCCCCCACTGAACTTGGAAGTT...TGGAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACAGCCCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp CCCCTGGGCTGTGAGGGGTCTCCCTTGCATTTGCAAGCTGGGCTGGTCTCTCCAGATCTTCCTTCCACTTaGACTTCGGCTTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PLGCEGSPLHLQAGLVSPDLPST*TSALGP
Trigger: CGGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATC...TGGAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACAGCCCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACAAACACCTACTGCTCCTaGGGCCCCGCCCCGGACCCC +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTNTYCS*GPAPDP
Trigger: GGGGTCCGGGGCGGGGCCGCAGGAGCAGTAGGTGTT...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341247.8
CDS-3UTR CCA 90 bp CCCCTGGGCTGTGAGGGGTCTCCCTTGCATTTGCAAGCTGGGCTGGTCTCTCCAAAAGACTGGAGGCTCTaGAATCTGGACTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: PLGCEGSPLHLQAGLVSPKDWRL*NLDLVA
Trigger: AGCCACTAAGTCCAGATTCCAGAGCCTCCAGTCTTT...TGGAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACAGCCCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp CCAGCCTTTCCTGATAGGTGGGGACACAGTTTTTGGGCTCTTGACAGAGGTGCTCATCTTCGGCAGGGGTaGAACGGACTGCCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: PAFPDRWGHSFWALDRGAHLRQG*NGLPGY
Trigger: ATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATG...AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCCCCTTCCTGATGGGTaGTGCAGACCTCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSPLPDG*CRPQDL
Trigger: CAGGTCCTGAGGTCTGCATCACCCATCAGGAAGGGG...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTACCGAGATCACGCCACTaGACTCCAGCCTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLPRSRH*TPAWGT
Trigger: TGTTCCCCAGGCTGGAGTGCAGTGGCGTGATCTCGG...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR TCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGTGGGGATATCGACCCTaGACGAGGGCTTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSWGYRP*TRASGG
Trigger: ACCTCCTGAAGCCCTCGTTCAGGGTCGATATCCCCA...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCCCCCTTCCTGATGGGTaGTGCAGACCTCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLPLPDG*CRPQDL
Trigger: CAGGTCCTGAGGTCTGCATCACCCATCAGGAAGGGG...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAGTCTGTGTGAGACTCTaGTCCCAGCCCTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLVCVRL*SQPWVL
Trigger: GAGAACCCAGGGCTGGGAGCAGAGTCTCACACAGAC...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR GCA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAGTGAGGGGTCTCCCTTaGATTTGCAAGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLVRGLP*ICKLGW
Trigger: CCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCAC...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TCGTCTTCAGGAGGCCATTTGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCAGTGAGGGGTCTCCCTTaGATTTGCAAGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSSGGHLGFDILIPSSKAVRGLP*ICKLGW
Trigger: CCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCAC...TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp CCCCTGGGCTGTGAGGGGTCTCCCTTGCATTTGCAAGCTGGGCTGGTCTCTCCAGAAGCTTCATTGCTTTaGGAGGAGAACTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PLGCEGSPLHLQAGLVSPEASLL*EENFQK
Trigger: TTTCTGAAAGTTCTCCTCCCAAAGCAATGAAGCTTC...TGGAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACAGCCCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAGATCCTCACCGTCCTTaGTGTGGGGATATCGACCCT +
Preference number: 4 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLDPHRP*CGDIDP
Trigger: AGGGTCGATATCCCCACATCAAGGACGGTGAGGATC...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACGGAAGCAGCTGATGTaGAACACCTGCTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTRKQLM*NTCWLA
Trigger: GGCCAACCAGCAGGTGTTTCACATCAGCTGCTTCCG...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCCGGAAGCAGCTGATGTaGAACACCTGCTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLRKQLM*NTCWLA
Trigger: GGCCAACCAGCAGGTGTTTCACATCAGCTGCTTCCG...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CCAGCCTTTCCTGATAGGTGGGGACACAGTTTTTGGGCTCTTGACAGAGGTGCTATGAAGCTGCTACAGTaGATGGGCGGCTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: PAFPDRWGHSFWALDRGAMKLLQ*MGGFFP
Trigger: AGGAAAGAAGCCGCCCATTCACTGTAGCAGCTTCAT...AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTACCACAGAGAGCTCTTTaGCCACTTCTCCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLPQRAL*PLLPPR
Trigger: TCTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGG...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCGCCTTTCCTCTGCGCTaGTACCAGCCCTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSAFPLR*YQPCHR
Trigger: CCTGTGACAGGGCTGGTAGCAGCGCAGAGGAAAGGC...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR GCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGTCTGTGTGAGACTCTaGTCCCAGCCCTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLVCVRL*SQPWVL
Trigger: GAGAACCCAGGGCTGGGAGCAGAGTCTCACACAGAC...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR GCA 90 bp TTCCACGCAGGTCTCTCTTGCAGGTGCCTGAAACTTATTAGGAGGAAAGTGGAAGTCTGTGTGAGACTCTaGTCCCAGCCCTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: FHAGLSCRCLKLIRRKVEVCVRL*SQPWVL
Trigger: GAGAACCCAGGGCTGGGAGCAGAGTCTCACACAGAC...TTCCACTTTCCTCCTAATAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGGATCTTCCTTCCACTTaGACTTCGGCTTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSDLPST*TSALGP
Trigger: CGGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATC...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGTGAGGGGTCTCCCTTaGATTTGCAAGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLVRGLP*ICKLGW
Trigger: CCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCAC...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGGCAGACCTCAGGACCTaGGGGCACATTCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSADLRT*GHILLL
Trigger: CAAAAGGAGAATGTGCCCCCAGGTCCTGAGGTCTGC...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACAAACTTCCAAGTTCAGTaGGGGGTGGCCAGGCGATCC +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTNFQVQ*GVARRS
Trigger: GGATCGCCTGGCCACCCCCCACTGAACTTGGAAGTT...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCTGGGGATATCGACCCTaGACGAGGGCTTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSWGYRP*TRASGG
Trigger: ACCTCCTGAAGCCCTCGTTCAGGGTCGATATCCCCA...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTACCCCTTCCTGATGGGTaGTGCAGACCTCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLPLPDG*CRPQDL
Trigger: CAGGTCCTGAGGTCTGCATCACCCATCAGGAAGGGG...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGGGATGGACAGGCTGTTaGACCTCACTCTTAACCTGG +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSGWTGC*TSLLTW
Trigger: CCAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCC...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTCGGAAGCAGCTGATGTaGAACACCTGCTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIRKQLM*NTCWLA
Trigger: GGCCAACCAGCAGGTGTTTCACATCAGCTGCTTCCG...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCCGGAAGCAGCTGATGTaGAACACCTGCTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSRKQLM*NTCWLA
Trigger: GGCCAACCAGCAGGTGTTTCACATCAGCTGCTTCCG...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp GGCCATTTGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCACTTCCTGAACTTGAACTTCGGGCTTGCTaGTTTCGTCTTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GHLGFDILIPSSKALPELELRAC*FRLQEA
Trigger: GGCCTCCTGAAGACGAAATCAGCAAGCCCGAAGTTC...AAGTTCAGGAAGTGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGAACTTCGGGCTTGCTaGTTTCGTCTTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLELRAC*FRLQEA
Trigger: GGCCTCCTGAAGACGAAATCAGCAAGCCCGAAGTTC...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACCACAGAGAGCTCTTTaGCCACTTCTCCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTPQRAL*PLLPPR
Trigger: TCTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGG...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTAGGCAGAGGTTGCAGTaGGCCGAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFRQRLQ*AEITPL
Trigger: CAGTGGCGTGATCTCGGCTCACTGCAACCTCTGCCT...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR GCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGAGGGGTGGAACGGACTaGCAGGCTATTCTCATTTGC +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSRGGTD*QAILIC
Trigger: GCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCT...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp GGCCATTTGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCACTTCCTGAACTTGGTCTCCCTTGCATTTaGAAGCTGGGCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GHLGFDILIPSSKALPELGLPCI*KLGWSL
Trigger: GAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACC...AAGTTCAGGAAGTGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp GGCCATTTGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCACTTCCTGAACTTCTTCTTGGTCAGCTTTaGCTCCAGAAGCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: GHLGFDILIPSSKALPELLLGQL*LQKQRG
Trigger: GCCACGCTGCTTCTGGAGCCAAAGCTGACCAAGAAG...AAGTTCAGGAAGTGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCCTTCTTGGTCAGCTTTaGCTCCAGAAGCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLLLGQL*LQKQRG
Trigger: GCCACGCTGCTTCTGGAGCCAAAGCTGACCAAGAAG...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CCCCTGGGCTGTGAGGGGTCTCCCTTGCATTTGCAAGCTGGGCTGGTCTCTCCATTTCTACTTCATGCCTaGATTCTCCTAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: PLGCEGSPLHLQAGLVSPFLLHA*ILLDNF
Trigger: AAAATTGTCTAGGAGAATCCAGGCATGAAGTAGAAA...TGGAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACAGCCCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGTTGGACACAGCTGCCTaGTACTTGGCCATTCGATCC +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSLDTAA*YLAIRS
Trigger: GGATCGAATGGCCAAGTACCAGGCAGCTGTGTCCAA...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACAGCAGACCTCAGGACCTaGGGGCACATTCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTADLRT*GHILLL
Trigger: CAAAAGGAGAATGTGCCCCCAGGTCCTGAGGTCTGC...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCCATCTTCGGCAGGGGTaGAACGGACTGCCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSHLRQG*NGLPGY
Trigger: ATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATG...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTCATCTTCGGCAGGGGTaGAACGGACTGCCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIHLRQG*NGLPGY
Trigger: ATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATG...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TCGTCTTCAGGAGGCCATTTGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCAGAAACACCTGCTGGTTaGCCAAGAGACGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: SSSGGHLGFDILIPSSKAETPAG*PRDAPL
Trigger: CAATGGAGCGTCTCTTGGCCAACCAGCAGGTGTTTC...TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp CCAGCCTTTCCTGATAGGTGGGGACACAGTTTTTGGGCTCTTGACAGAGGTGCTCTTGCATTTGCAAGCTaGGCTGGTCTCTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: PAFPDRWGHSFWALDRGALAFAS*AGLSKI
Trigger: GATTTTGGAGAGACCAGCCCAGCTTGCAAATGCAAG...AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGACCTCACTCTTAACCTaGGAGTCACCTGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSTSLLT*ESPGES
Trigger: TGACTCCCCAGGTGACTCCCAGGTTAAGAGTGAGGT...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394943.7
ENST00000552783.5
CDS-3UTR TCA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTGATCCTCACCGTCCTTaGTGTGGGGATATCGACCCT +
Preference number: 4 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIDPHRP*CGDIDP
Trigger: AGGGTCGATATCCCCACATCAAGGACGGTGAGGATC...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCCCCTTCCTGATGGGTaGTGCAGACCTCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSPLPDG*CRPQDL
Trigger: CAGGTCCTGAGGTCTGCATCACCCATCAGGAAGGGG...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCACCCCTTCCTGATGGGTaGTGCAGACCTCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: RIWAIIRWNISPVTSLTAPLPDG*CRPQDL
Trigger: CAGGTCCTGAGGTCTGCATCACCCATCAGGAAGGGG...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGATCTTTTCCCCTTCCTaGTGGGTGATGCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSIFSPS*WVMQTS
Trigger: TGAGGTCTGCATCACCCATCAGGAAGGGGAAAAGAT...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCAGCAACGGAAGCAGCTaGTGTGAAACACCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLSNGSS*CETPAG
Trigger: ACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGCT...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp AGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCAGGACTCCAAGGCACTTCCTaGACTTCCAAGTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RSRSTSSGTSGLLISSSGLQGTS*TSKFSG
Trigger: CCCACTGAACTTGGAAGTTCAGGAAGTGCCTTGGAG...TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCCTCCAAGGCACTTCCTaGACTTCCAAGTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLLQGTS*TSKFSG
Trigger: CCCACTGAACTTGGAAGTTCAGGAAGTGCCTTGGAG...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTGAACTTCGGGCTTGCTaGTTTCGTCTTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIELRAC*FRLQEA
Trigger: GGCCTCCTGAAGACGAAATCAGCAAGCCCGAAGTTC...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CCAGCCTTTCCTGATAGGTGGGGACACAGTTTTTGGGCTCTTGACAGAGGTGCTAGAGGTGCTTTGAAATaGAGCTGCTACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: PAFPDRWGHSFWALDRGARGALK*SCYSEW
Trigger: CCATTCACTGTAGCAGCTTCATTTCAAAGCACCTCT...AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGATGTGCATCACATTTTaGCAAAGGGCAGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSMCITF*QRAVAR
Trigger: GCGAGCCACTGCCCTTTGTCAAAATGTGATGCACAT...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGCTGCTAACACCTACTaGTCCTGCGGCCCCGCCCCG +
Preference number: 4 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQAANTY*SCGPAP
Trigger: CGGGGCGGGGCCGCAGGAGCAGTAGGTGTTAGCAGC...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000341247.8
CDS-3UTR GCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGAGCAGGAGGATGGTCTaGTCTGTGCCTAATCTCAGT +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSSRRMV*SVPNLS
Trigger: ACTGAGATTAGGCACAGAGCAGACCATCCTCCTGCT...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR GCA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTGGTCTCCCTTGCATTTaGAAGCTGGGCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIGLPCI*KLGWSL
Trigger: GAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACC...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTACTTGCACTTCGGCTTTaGGCCCGGAGAATCTTAGTT +
Preference number: 4 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLLALRL*ARRILV
Trigger: AACTAAGATTCTCCGGGCCCAAAGCCGAAGTGCAAG...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TCGTCTTCAGGAGGCCATTTGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCAACCTCACTCTTAACCTaGGAGTCACGGGAGTCATCT +
Preference number: 4 (lower is better)
Translates to: SSSGGHLGFDILIPSSKATSLLT*ESRESS
Trigger: AGATGACTCCCGTGACTCCCAGGTTAAGAGTGAGGT...TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGAACTTCCAAGTTCAGTaGGGGGTGGCCAGGCGATCC +
Preference number: 4 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWNFQVQ*GVARRS
Trigger: GGATCGCCTGGCCACCCCCCACTGAACTTGGAAGTT...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGAGCTGCTACAGTGAATaGGCGGCTTCTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSSCYSE*AASFLQ
Trigger: CTGAAGGAAAGAAGCCGCCCATTCACTGTAGCAGCT...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAGCCTTTCCTGATAGGTaGGGACACAGTTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLAFPDR*GHSFWA
Trigger: AGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGC...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
3UTR CAA 72 bp ACTTCGGGCTTGCTGATTTCGTCTTCAGGAGGCCATTaGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: TSGLLISSSGGH*GFDILIPSSKA
Trigger: TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGACGAAATCAGCAAGCCCGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCGATCCTCACCGTCCTTaGTGTGGGGATATCGACCCT +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPDPHRP*CGDIDP
Trigger: AGGGTCGATATCCCCACATCAAGGACGGTGAGGATC...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTTTATAGAGGTTTCTaGGAGGCGTGGAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSLYRGF*EAWKFQ
Trigger: CTGGAACTTCCACGCCTCTCAGAAACCTCTATAAAG...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCCCCCTTCCTGATGGGTaGTGCAGACCTCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGPLPDG*CRPQDL
Trigger: CAGGTCCTGAGGTCTGCATCACCCATCAGGAAGGGG...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTGGATGGACAGGCTGTTaGACCTCACTCTTAACCTGG +
Preference number: 4 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIGWTGC*TSLLTW
Trigger: CCAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCC...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGGAACTTCGGGCTTGCTaGTTTCGTCTTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWELRAC*FRLQEA
Trigger: GGCCTCCTGAAGACGAAATCAGCAAGCCCGAAGTTC...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACAAGCCGCCTTTCCTCTaGGCTGCTACCAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNKPPFL*AATSPV
Trigger: GACAGGGCTGGTAGCAGCGCAGAGGAAAGGCGGCTT...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR GCA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTAGGGGTGGAACGGACTaGCAGGCTATTCTCATTTGC +
Preference number: 4 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIRGGTD*QAILIC
Trigger: GCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCT...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCGGTCTCCCTTGCATTTaGAAGCTGGGCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPGLPCI*KLGWSL
Trigger: GAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACC...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGTGAGGGGTCTCCCTTaGATTTGCAAGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSVRGLP*ICKLGW
Trigger: CCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCAC...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGCTTCTTGGTCAGCTTTaGCTCCAGAAGCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQLLGQL*LQKQRG
Trigger: GCCACGCTGCTTCTGGAGCCAAAGCTGACCAAGAAG...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp AGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCAGGACTTGCACTTCGGCTTTaGGCCCGGAGAATCTTAGTT +
Preference number: 4 (lower is better)
Translates to: RSRSTSSGTSGLLISSSGLALRL*ARRILV
Trigger: AACTAAGATTCTCCGGGCCCAAAGCCGAAGTGCAAG...TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTTGCATTTGCAAGCTaGGCTGGTCTCTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSLAFAS*AGLSKI
Trigger: GATTTTGGAGAGACCAGCCCAGCTTGCAAATGCAAG...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCGATCCTCAGCTTCTTaGTTTCAGCTGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSRSSAS*FQLACL
Trigger: AAGACAAGCCAGCTGAAACCAAGAAGCTGAGGATCG...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCAGCTGCTACAGTGAATaGGCGGCTTCTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLSCYSE*AASFLQ
Trigger: CTGAAGGAAAGAAGCCGCCCATTCACTGTAGCAGCT...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACATGGGGACACAGTTTTTaGGCTCTTGACAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTWGHSF*ALDRGA
Trigger: AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCA...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTACCTCACTCTTAACCTaGGAGTCACCTGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: DKGQWLANTNMNLRPSIITSLLT*ESPGES
Trigger: TGACTCCCCAGGTGACTCCCAGGTTAAGAGTGAGGT...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394943.7
ENST00000552783.5
3UTR CAA 72 bp TTCAGATCTAGATCGACATCCTCAGGAACTTCGGGCTaGCTGATTTCGTCTTCAGGAGGCCATTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: FRSRSTSSGTSG*LISSSGGHLGF
Trigger: AAAGCCCAAATGGCCTCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCTGGGGATATCGACCCTaGACGAGGGCTTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGWGYRP*TRASGG
Trigger: ACCTCCTGAAGCCCTCGTTCAGGGTCGATATCCCCA...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATCCTCAGGAGATCCTCACCGTCCTTaGTGTGGGGATATCGACCCT +
Preference number: 4 (lower is better)
Translates to: FSEEDRLSFFRSRSTSSGDPHRP*CGDIDP
Trigger: AGGGTCGATATCCCCACATCAAGGACGGTGAGGATC...TCCTGAGGATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGGATCCTCACCGTCCTTaGTGTGGGGATATCGACCCT +
Preference number: 4 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRDPHRP*CGDIDP
Trigger: AGGGTCGATATCCCCACATCAAGGACGGTGAGGATC...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCCTTTATAGAGGTTTCTaGGAGGCGTGGAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLLYRGF*EAWKFQ
Trigger: CTGGAACTTCCACGCCTCTCAGAAACCTCTATAAAG...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTGGATGGACAGGCTGTTaGACCTCACTCTTAACCTGG +
Preference number: 4 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFGWTGC*TSLLTW
Trigger: CCAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCC...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGGGATGGACAGGCTGTTaGACCTCACTCTTAACCTGG +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQGWTGC*TSLLTW
Trigger: CCAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCC...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGACGGAAGCAGCTGATGTaGAACACCTGCTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GFSIASKSALLYYTSGRRRKQLM*NTCWLA
Trigger: GGCCAACCAGCAGGTGTTTCACATCAGCTGCTTCCG...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAAGCAACGGAAGCAGCTaGTGTGAAACACCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLSNGSS*CETPAG
Trigger: ACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGCT...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTAGCAACGGAAGCAGCTaGTGTGAAACACCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFSNGSS*CETPAG
Trigger: ACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGCT...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGCTCCAAGGCACTTCCTaGACTTCCAAGTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQLQGTS*TSKFSG
Trigger: CCCACTGAACTTGGAAGTTCAGGAAGTGCCTTGGAG...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGGAACTTCGGGCTTGCTaGTTTCGTCTTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRELRAC*FRLQEA
Trigger: GGCCTCCTGAAGACGAAATCAGCAAGCCCGAAGTTC...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATGAAGCTGCTACAGTaGATGGGCGGCTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSMKLLQ*MGGFFP
Trigger: AGGAAAGAAGCCGCCCATTCACTGTAGCAGCTTCAT...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CGGAGTCTGCACCATTTTCTACAAGATTCTCATTCTCCATCTCCAAACTATGACCCACAGAGAGCTCTTTaGCCACTTCTCCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RSLHHFLQDSHSPSPNYDPQRAL*PLLPPR
Trigger: TCTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGG...GTCATAGTTTGGAGATGGAGAATGAGAATCTTGTAGAAAATGGTGCAGACTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATGTGCATCACATTTTaGCAAAGGGCAGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSMCITF*QRAVAR
Trigger: GCGAGCCACTGCCCTTTGTCAAAATGTGATGCACAT...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCTCTCTTGCAGGTGCCTaGAACTTCATTGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLSLAGA*NFIALG
Trigger: TCCCAAAGCAATGAAGTTTCAGGCACCTGCAAGAGA...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552491.5
ENST00000552909.5
CDS-3UTR GCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACAGTCCCCTTTCTAAAGTaGTGGGAGAGATTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTVPFLK*WERFSV
Trigger: CACCGAAAATCTCTCCCAGCACTTTAGAAAGGGGAC...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR GCA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGGGTCTCCCTTGCATTTaGAAGCTGGGCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRGLPCI*KLGWSL
Trigger: GAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACC...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCCTTGGCTTCCATACTTaGAGCCAGGACACCCACCTT +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPLGFHT*SQDTHL
Trigger: AAGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAG...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTACACTTGTTTCCTTTCTaGAACTCTTCCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLHLFPF*NSSTHR
Trigger: TCTGTGGGTGGAAGAGTTGCAGAAAGGAAACAAGTG...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTCACGCAGGTCTCTCTTaGAGGTGCCTGAAACTTCAT +
Preference number: 4 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIHAGLS*RCLKLH
Trigger: ATGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTG...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552491.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CCCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTCCTTTCTGCAACTCTCTCTGCTCCCAGCCCTaGGTTCTCCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PILLRSLGIFHLFPFCNSLCSQP*VLPLLL
Trigger: AAGAAGAAGTGGGAGAACCCAGGGCTGGGAGCAGAG...AGAGTTGCAGAAAGGAAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCTTCTTGGTCAGCTTTaGCTCCAGAAGCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSLLGQL*LQKQRG
Trigger: GCCACGCTGCTTCTGGAGCCAAAGCTGACCAAGAAG...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCTTGGACACAGCTGCCTaGTACTTGGCCATTCGATCC +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPLDTAA*YLAIRS
Trigger: GGATCGAATGGCCAAGTACCAGGCAGCTGTGTCCAA...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CGGAGTCTGCACCATTTTCTACAAGATTCTCATTCTCCATCTCCAAACTATGACGCAGACCTCAGGACCTaGGGGCACATTCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: RSLHHFLQDSHSPSPNYDADLRT*GHILLL
Trigger: CAAAAGGAGAATGTGCCCCCAGGTCCTGAGGTCTGC...GTCATAGTTTGGAGATGGAGAATGAGAATCTTGTAGAAAATGGTGCAGACTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGCAGACCTCAGGACCTaGGGGCACATTCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSADLRT*GHILLL
Trigger: CAAAAGGAGAATGTGCCCCCAGGTCCTGAGGTCTGC...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTACATCTTCGGCAGGGGTaGAACGGACTGCCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLHLRQG*NGLPGY
Trigger: ATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATG...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCCATCTTCGGCAGGGGTaGAACGGACTGCCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGHLRQG*NGLPGY
Trigger: ATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATG...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCAAAGACTGGAGGCTCTaGAATCTGGACTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLKDWRL*NLDLVA
Trigger: AGCCACTAAGTCCAGATTCCAGAGCCTCCAGTCTTT...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGGAAACACCTGCTGGTTaGCCAAGAGACGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWETPAG*PRDAPL
Trigger: CAATGGAGCGTCTCTTGGCCAACCAGCAGGTGTTTC...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAGAAACACCTGCTGGTTaGCCAAGAGACGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLETPAG*PRDAPL
Trigger: CAATGGAGCGTCTCTTGGCCAACCAGCAGGTGTTTC...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCCTTGCATTTGCAAGCTaGGCTGGTCTCTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLLAFAS*AGLSKI
Trigger: GATTTTGGAGAGACCAGCCCAGCTTGCAAATGCAAG...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCCTTCTTGGTTTCAGCTaGCTTGTCTTCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLLLGFS*LVFLLL
Trigger: CAGGAGAAGGAAGACAAGCCAGCTGAAACCAAGAAG...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACGATCCTCAGCTTCTTaGTTTCAGCTGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTRSSAS*FQLACL
Trigger: AAGACAAGCCAGCTGAAACCAAGAAGCTGAGGATCG...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCCGATCCTCAGCTTCTTaGTTTCAGCTGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLRSSAS*FQLACL
Trigger: AAGACAAGCCAGCTGAAACCAAGAAGCTGAGGATCG...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp AGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCAGGACTTGTCTACAGACACTaGAATACCTGGCTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: RSRSTSSGTSGLLISSSGLVYRH*NTWLKA
Trigger: GGCTTTTAGCCAGGTATTTCAGTGTCTGTAGACAAG...TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCCTTTATAGAGGTTTCTaGGAGGCGTGGAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSLYRGF*EAWKFQ
Trigger: CTGGAACTTCCACGCCTCTCAGAAACCTCTATAAAG...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACCCCCTTCCTGATGGGTaGTGCAGACCTCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDPLPDG*CRPQDL
Trigger: CAGGTCCTGAGGTCTGCATCACCCATCAGGAAGGGG...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp GGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCTACAAAACTCCCCTTCCTGATGGGTaGTGCAGACCTCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: GFLILSSEFFSKGVVYKTPLPDG*CRPQDL
Trigger: CAGGTCCTGAGGTCTGCATCACCCATCAGGAAGGGG...AGTTTTGTAGACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGATCTTTTCCCCTTCCTaGTGGGTGATGCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQIFSPS*WVMQTS
Trigger: TGAGGTCTGCATCACCCATCAGGAAGGGGAAAAGAT...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGATGGACAGGCTGTTaGACCTCACTCTTAACCTGG +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSGWTGC*TSLLTW
Trigger: CCAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCC...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CACATCCTGGGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCGGATGGACAGGCTGTTaGACCTCACTCTTAACCTGG +
Preference number: 4 (lower is better)
Translates to: HILGFLILSSEFFSKGVVGWTGC*TSLLTW
Trigger: CCAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCC...GACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCCCAGGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCGGAAGCAGCTGATGTaGAACACCTGCTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: NYISCWDTCLCASHFDKGRKQLM*NTCWLA
Trigger: GGCCAACCAGCAGGTGTTTCACATCAGCTGCTTCCG...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp GAATTCTTCAGCAAAGGTGTTGTCTACAAAACTCGACCAATTCAGAGACTTGGGAGCAACGGAAGCAGCTaGTGTGAAACACCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: EFFSKGVVYKTRPIQRLGSNGSS*CETPAG
Trigger: ACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGCT...CCCAAGTCTCTGAATTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGAGCAACGGAAGCAGCTaGTGTGAAACACCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQSNGSS*CETPAG
Trigger: ACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGCT...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCTCCAAGGCACTTCCTaGACTTCCAAGTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSLQGTS*TSKFSG
Trigger: CCCACTGAACTTGGAAGTTCAGGAAGTGCCTTGGAG...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCGAACTTCGGGCTTGCTaGTTTCGTCTTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGELRAC*FRLQEA
Trigger: GGCCTCCTGAAGACGAAATCAGCAAGCCCGAAGTTC...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp AGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCAGGACAGTTTTTGGGCTCTTaGCAGAGGTGCTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: RSRSTSSGTSGLLISSSGQFLGS*QRCFEM
Trigger: CATTTCAAAGCACCTCTGTCAAGAGCCCAAAAACTG...TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACAGTTTTTGGGCTCTTaGCAGAGGTGCTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTQFLGS*QRCFEM
Trigger: CATTTCAAAGCACCTCTGTCAAGAGCCCAAAAACTG...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGATGTGCATCACATTTTaGCAAAGGGCAGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQMCITF*QRAVAR
Trigger: GCGAGCCACTGCCCTTTGTCAAAATGTGATGCACAT...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGATGTGCATCACATTTTaGCAAAGGGCAGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWMCITF*QRAVAR
Trigger: GCGAGCCACTGCCCTTTGTCAAAATGTGATGCACAT...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CGTTTTCATTTTTGCTTGCCCATAGATCCTTGTGTGGTCTGTGCCCAAAGCCTTGTCCCCTTTCTAAAGTaGTGGGAGAGATTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: RFHFCLPIDPCVVCAQSLVPFLK*WERFSV
Trigger: CACCGAAAATCTCTCCCAGCACTTTAGAAAGGGGAC...AAGGCTTTGGGCACAGACCACACAAGGATCTATGGGCAAGCAAAAATGAAAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGAGATCTTCCTTCCACTTaGACTTCGGCTTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GFSIASKSALLYYTSGRRDLPST*TSALGP
Trigger: CGGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATC...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACGATCTTCCTTCCACTTaGACTTCGGCTTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNDLPST*TSALGP
Trigger: CGGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATC...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CACATCCTGGGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCAGGGGTGGAACGGACTaGCAGGCTATTCTCATTTGC +
Preference number: 4 (lower is better)
Translates to: HILGFLILSSEFFSKGVVRGGTD*QAILIC
Trigger: GCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCT...GACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCCCAGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGAGGGGTGGAACGGACTaGCAGGCTATTCTCATTTGC +
Preference number: 4 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRRGGTD*QAILIC
Trigger: GCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCT...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCTTGGCTTCCATACTTaGAGCCAGGACACCCACCTT +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSLGFHT*SQDTHL
Trigger: AAGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAG...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTACAGACTCTTCACTCTaGTCTGACATGCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFTDSSL*SDMLQP
Trigger: AGGCTGGAGCATGTCAGAGCAGAGTGAAGAGTCTGT...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGACAGACTCTTCACTCTaGTCTGACATGCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQTDSSL*SDMLQP
Trigger: AGGCTGGAGCATGTCAGAGCAGAGTGAAGAGTCTGT...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACACTTGTTTCCTTTCTaGAACTCTTCCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTHLFPF*NSSTHR
Trigger: TCTGTGGGTGGAAGAGTTGCAGAAAGGAAACAAGTG...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TTCCACGCAGGTCTCTCTTGCAGGTGCCTGAAACTTATTAGGAGGAAAGTGGAACACTTGTTTCCTTTCTaGAACTCTTCCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: FHAGLSCRCLKLIRRKVEHLFPF*NSSTHR
Trigger: TCTGTGGGTGGAAGAGTTGCAGAAAGGAAACAAGTG...TTCCACTTTCCTCCTAATAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCCACGCAGGTCTCTCTTaGAGGTGCCTGAAACTTCAT +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPHAGLS*RCLKLH
Trigger: ATGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTG...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552491.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CCAGCCTTTCCTGATAGGTGGGGACACAGTTTTTGGGCTCTTGACAGAGGTGCTCAAGAGAAAGTTCTTTaGCTGTTACCCTCAATGATA +
Preference number: 4 (lower is better)
Translates to: PAFPDRWGHSFWALDRGAQEKVL*LLPSMI
Trigger: TATCATTGAGGGTAACAGCCAAAGAACTTTCTCTTG...AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAACTTCTTGGTCAGCTTTaGCTCCAGAAGCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQLLGQL*LQKQRG
Trigger: GCCACGCTGCTTCTGGAGCCAAAGCTGACCAAGAAG...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAAGTCTAGATCTGGGGTaGATTTGTTCTTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLSLDLG*ICSSWS
Trigger: TGACCAAGAAGAACAAATCCACCCCAGATCTAGACT...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTACTTGCACTTCGGCTTTaGGCCCGGAGAATCTTAGTT +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLLALRL*ARRILV
Trigger: AACTAAGATTCTCCGGGCCCAAAGCCGAAGTGCAAG...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCAGACCTCAGGACCTaGGGGCACATTCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQADLRT*GHILLL
Trigger: CAAAAGGAGAATGTGCCCCCAGGTCCTGAGGTCTGC...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAGCAGACCTCAGGACCTaGGGGCACATTCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLADLRT*GHILLL
Trigger: CAAAAGGAGAATGTGCCCCCAGGTCCTGAGGTCTGC...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTCTGGACTTAGTGGCTTaGGATGGACAGGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFLDLVA*DGQAVE
Trigger: TTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAG...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGCTGGACTTAGTGGCTTaGGATGGACAGGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQLDLVA*DGQAVE
Trigger: TTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAG...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCAAAGACTGGAGGCTCTaGAATCTGGACTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSKDWRL*NLDLVA
Trigger: AGCCACTAAGTCCAGATTCCAGAGCCTCCAGTCTTT...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCATTTGCAAGCTGGGCTaGTCTCTCCAAAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLICKLG*SLQNLF
Trigger: GAAGAGATTTTGGAGAGACCAGCCCAGCTTGCAAAT...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCCTTCTTGGTTTCAGCTaGCTTGTCTTCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSLLGFS*LVFLLL
Trigger: CAGGAGAAGGAAGACAAGCCAGCTGAAACCAAGAAG...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTTGGGGACACAGTTTTTaGGCTCTTGACAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFWGHSF*ALDRGA
Trigger: AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCA...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTGCCTTTCCTGATAGGTaGGGACACAGTTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFAFPDR*GHSFWA
Trigger: AGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGC...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAGCCTTTCCTGATAGGTaGGGACACAGTTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLAFPDR*GHSFWA
Trigger: AGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGC...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACATTTGACAAAGGGCAGTaGCTCGCTAACACTAACATG +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTFDKGQ*LANTNM
Trigger: CATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAA...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGACTCCAAGCTGCTCCTaGTCCACTGCTGTTTCAGAC +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQTPSCS*STAVSD
Trigger: GTCTGAAACAGCAGTGGACCAGGAGCAGCTTGGAGT...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552783.5
3UTR CAA 72 bp ATTTCGTCTTCAGGAGGCCATTTGGGCTTTGACATTTaGATCCCTTCCTCCAAGGCACTTCCTGAACTTCCA +
Preference number: 4 (lower is better)
Translates to: ISSSGGHLGFDI*IPSSKALPELP
Trigger: TGGAAGTTCAGGAAGTGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGACGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCTTCCACAATAGCCGATaGCTTGTTCTTGTTGACAAG +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLFHNSR*LVLVDK
Trigger: CTTGTCAACAAGAACAAGTCATCGGCTATTGTGGAA...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR TCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATGGGGATATCGACCCTaGACGAGGGCTTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCAWGYRP*TRASGG
Trigger: ACCTCCTGAAGCCCTCGTTCAGGGTCGATATCCCCA...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCCATTTTATGAATTTTaGTTTCGCCACCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSPFYEF*FRHHWL
Trigger: AAGCCAGTGGTGGCGAAATCAAAATTCATAAAATGG...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGATCTTTTCCCCTTCCTaGTGGGTGATGCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQIFSPS*WVMQTS
Trigger: TGAGGTCTGCATCACCCATCAGGAAGGGGAAAAGAT...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGATCTTTTCCCCTTCCTaGTGGGTGATGCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRIFSPS*WVMQTS
Trigger: TGAGGTCTGCATCACCCATCAGGAAGGGGAAAAGAT...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGAGGATGGACAGGCTGTTaGACCTCACTCTTAACCTGG +
Preference number: 4 (lower is better)
Translates to: GFSIASKSALLYYTSGRRGWTGC*TSLLTW
Trigger: CCAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCC...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp GGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCTACAAAACTCGGAAGCAGCTGATGTaGAACACCTGCTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GFLILSSEFFSKGVVYKTRKQLM*NTCWLA
Trigger: GGCCAACCAGCAGGTGTTTCACATCAGCTGCTTCCG...AGTTTTGTAGACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACCGGAAGCAGCTGATGTaGAACACCTGCTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDRKQLM*NTCWLA
Trigger: GGCCAACCAGCAGGTGTTTCACATCAGCTGCTTCCG...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGCAACGGAAGCAGCTaGTGTGAAACACCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGSNGSS*CETPAG
Trigger: ACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGCT...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TCGTCTTCAGGAGGCCATTTGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCACATATGTTCCTAGACTaGGTTTGTTGTTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: SSSGGHLGFDILIPSSKAHMFLD*VCCCNR
Trigger: CCTATTGCAACAACAAACTCAGTCTAGGAACATATG...TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTATGAAGCTGCTACAGTaGATGGGCGGCTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSMKLLQ*MGGFFP
Trigger: AGGAAAGAAGCCGCCCATTCACTGTAGCAGCTTCAT...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGATGAAGCTGCTACAGTaGATGGGCGGCTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQMKLLQ*MGGFFP
Trigger: AGGAAAGAAGCCGCCCATTCACTGTAGCAGCTTCAT...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTCAGTTTTTGGGCTCTTaGCAGAGGTGCTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIQFLGS*QRCFEM
Trigger: CATTTCAAAGCACCTCTGTCAAGAGCCCAAAAACTG...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCCACAGAGAGCTCTTTaGCCACTTCTCCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: NYISCWDTCLCASHFDKGPQRAL*PLLPPR
Trigger: TCTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGG...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGATGTGCATCACATTTTaGCAAAGGGCAGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRMCITF*QRAVAR
Trigger: GCGAGCCACTGCCCTTTGTCAAAATGTGATGCACAT...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCTGTTTCAGACAGCTGTaGACAGTTACAGCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPCFRQL*TVTALP
Trigger: TGGCAAGGCTGTAACTGTTCACAGCTGTCTGAAACA...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552783.5
CDS-3UTR GCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCCTTTCCTCTGCGCTaGTACCAGCCCTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCAFPLR*YQPCHR
Trigger: CCTGTGACAGGGCTGGTAGCAGCGCAGAGGAAAGGC...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR GCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGTCTGTGTGAGACTCTaGTCCCAGCCCTGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQVCVRL*SQPWVL
Trigger: GAGAACCCAGGGCTGGGAGCAGAGTCTCACACAGAC...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR GCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGAGCAGGAGGATGGTCTaGTCTGTGCCTAATCTCAGT +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQSRRMV*SVPNLS
Trigger: ACTGAGATTAGGCACAGAGCAGACCATCCTCCTGCT...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR GCA 90 bp CACATCCTGGGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCAGCAGGAGGATGGTCTaGTCTGTGCCTAATCTCAGT +
Preference number: 4 (lower is better)
Translates to: HILGFLILSSEFFSKGVVSRRMV*SVPNLS
Trigger: ACTGAGATTAGGCACAGAGCAGACCATCCTCCTGCT...GACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCCCAGGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGGGTGGAACGGACTaGCAGGCTATTCTCATTTGC +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLRGGTD*QAILIC
Trigger: GCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCT...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCACGCAGGTCTCTCTTaGAGGTGCCTGAAACTTCTT +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSHAGLS*RCLKLL
Trigger: AAGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTG...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCACACGCAGGTCTCTCTTaGAGGTGCCTGAAACTTCTT +
Preference number: 4 (lower is better)
Translates to: RIWAIIRWNISPVTSLTAHAGLS*RCLKLL
Trigger: AAGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTG...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGCACGCAGGTCTCTCTTaGAGGTGCCTGAAACTTCTT +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQHAGLS*RCLKLL
Trigger: AAGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTG...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAGTGAGGGGTCTCCCTTaGATTTGCAAGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCAVRGLP*ICKLGW
Trigger: CCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCAC...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACGTGAGGGGTCTCCCTTaGATTTGCAAGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDVRGLP*ICKLGW
Trigger: CCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCAC...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGACTTGGCTTCCATACTTaGAGCCAGGACACCCACCTT +
Preference number: 4 (lower is better)
Translates to: GFSIASKSALLYYTSGRRLGFHT*SQDTHL
Trigger: AAGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAG...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTACTTGGCTTCCATACTTaGAGCCAGGACACCCACCTT +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLLGFHT*SQDTHL
Trigger: AAGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAG...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CACATCCTGGGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCACAGACTCTTCACTCTaGTCTGACATGCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: HILGFLILSSEFFSKGVVTDSSL*SDMLQP
Trigger: AGGCTGGAGCATGTCAGAGCAGAGTGAAGAGTCTGT...GACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCCCAGGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTCACTTGTTTCCTTTCTaGAACTCTTCCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIHLFPF*NSSTHR
Trigger: TCTGTGGGTGGAAGAGTTGCAGAAAGGAAACAAGTG...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCCTCTGCTCCCAGCCCTaGGTTCTCCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCLCSQP*VLPLLL
Trigger: AAGAAGAAGTGGGAGAACCCAGGGCTGGGAGCAGAG...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR CCA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGACTTCAGCAGGAGGATaGTCTGCTCTGTGCCTAATC +
Preference number: 4 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRTSAGG*SALCLI
Trigger: GATTAGGCACAGAGCAGACCATCCTCCTGCTGAAGT...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR CCA 90 bp CGGAGTCTGCACCATTTTCTACAAGATTCTCATTCTCCATCTCCAAACTATGACACTTCAGCAGGAGGATaGTCTGCTCTGTGCCTAATC +
Preference number: 4 (lower is better)
Translates to: RSLHHFLQDSHSPSPNYDTSAGG*SALCLI
Trigger: GATTAGGCACAGAGCAGACCATCCTCCTGCTGAAGT...GTCATAGTTTGGAGATGGAGAATGAGAATCTTGTAGAAAATGGTGCAGACTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp TCGTCTTCAGGAGGCCATTTGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCATTACTTTCTGTTGAGTaGTCTTTAAGATCCTCACCG +
Preference number: 4 (lower is better)
Translates to: SSSGGHLGFDILIPSSKALLSVE*SLRSSP
Trigger: CGGTGAGGATCTTAAAGACCACTCAACAGAAAGTAA...TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp ATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATACCATCTTCGGCAGGGGTaGAACGGACTGCCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: ITRKESNHLEYSKFTGRYHLRQG*NGLPGY
Trigger: ATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATG...GTATCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCACATCTTCGGCAGGGGTaGAACGGACTGCCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCAHLRQG*NGLPGY
Trigger: ATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATG...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACCATCTTCGGCAGGGGTaGAACGGACTGCCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDHLRQG*NGLPGY
Trigger: ATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATG...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CACATCCTGGGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCCTGGACTTAGTGGCTTaGGATGGACAGGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: HILGFLILSSEFFSKGVVLDLVA*DGQAVE
Trigger: TTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAG...GACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCCCAGGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCACTGGACTTAGTGGCTTaGGATGGACAGGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: RIWAIIRWNISPVTSLTALDLVA*DGQAVE
Trigger: TTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAG...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAAAGACTGGAGGCTCTaGAATCTGGACTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPKDWRL*NLDLVA
Trigger: AGCCACTAAGTCCAGATTCCAGAGCCTCCAGTCTTT...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCCAAGAGACGCTCCATTaGATAGACTGTCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSQETLH*IDCLLT
Trigger: TGTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTG...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAGAAACACCTGCTGGTTaGCCAAGAGACGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLETPAG*PRDAPL
Trigger: CAATGGAGCGTCTCTTGGCCAACCAGCAGGTGTTTC...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGAAACACCTGCTGGTTaGCCAAGAGACGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQETPAG*PRDAPL
Trigger: CAATGGAGCGTCTCTTGGCCAACCAGCAGGTGTTTC...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTACTTGCATTTGCAAGCTaGGCTGGTCTCTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLLAFAS*AGLSKI
Trigger: GATTTTGGAGAGACCAGCCCAGCTTGCAAATGCAAG...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTTCTTGGTTTCAGCTaGCTTGTCTTCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWLLGFS*LVFLLL
Trigger: CAGGAGAAGGAAGACAAGCCAGCTGAAACCAAGAAG...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTCGATCCTCAGCTTCTTaGTTTCAGCTGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFRSSAS*FQLACL
Trigger: AAGACAAGCCAGCTGAAACCAAGAAGCTGAGGATCG...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAACTTCCAAGTTCAGTaGGGGGTGGCCAGGCGATCC +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDNFQVQ*GVARRS
Trigger: GGATCGCCTGGCCACCCCCCACTGAACTTGGAAGTT...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAAACTTCCAAGTTCAGTaGGGGGTGGCCAGGCGATCC +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCANFQVQ*GVARRS
Trigger: GGATCGCCTGGCCACCCCCCACTGAACTTGGAAGTT...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTAACTTCCAAGTTCAGTaGGGGGTGGCCAGGCGATCC +
Preference number: 4 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFNFQVQ*GVARRS
Trigger: GGATCGCCTGGCCACCCCCCACTGAACTTGGAAGTT...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTAGCTGCTACAGTGAATaGGCGGCTTCTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSSCYSE*AASFLQ
Trigger: CTGAAGGAAAGAAGCCGCCCATTCACTGTAGCAGCT...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATCCTCAGGATGGGGACACAGTTTTTaGGCTCTTGACAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: FSEEDRLSFFRSRSTSSGWGHSF*ALDRGA
Trigger: AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCA...TCCTGAGGATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGGCCTTTCCTGATAGGTaGGGACACAGTTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQAFPDR*GHSFWA
Trigger: AGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGC...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGAGACTTGGGTTCTTGTaGAGATTGTTGTTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSRLGFL*RLLFEE
Trigger: TTCCTCAAACAACAATCTCCACAAGAACCCAAGTCT...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCCGAAGAGTGTAGGTTaGTTTTTCAATTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSPKSVG*FFNCLK
Trigger: TTTGAGGCAATTGAAAAACCAACCTACACTCTTCGG...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTACCGAAGAGTGTAGGTTaGTTTTTCAATTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLPKSVG*FFNCLK
Trigger: TTTGAGGCAATTGAAAAACCAACCTACACTCTTCGG...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGAAACCTGGGAGTCACCTaGGGAGTCATCTTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: DITRKESNHLEYSKFTGRNLGVT*GVIFGR
Trigger: CCTGCCGAAGATGACTCCCCAGGTGACTCCCAGGTT...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394943.7
ENST00000552783.5
CDS-3UTR TCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAGATCCTCACCGTCCTTaGTGTGGGGATATCGACCCT +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCADPHRP*CGDIDP
Trigger: AGGGTCGATATCCCCACATCAAGGACGGTGAGGATC...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp AGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCAGGAATTTGTATAGTTGGTTaGGCTGCTTTGTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: RSRSTSSGTSGLLISSSGICIVG*AALFGH
Trigger: GTGTCCAAACAAAGCAGCTCAACCAACTATACAAAT...TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCATTTGTATAGTTGGTTaGGCTGCTTTGTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLICIVG*AALFGH
Trigger: GTGTCCAAACAAAGCAGCTCAACCAACTATACAAAT...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTCCTTTCTGCAACTCTTATCTTTTCCCCTTCCTaGTGGGTGATGCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: PFFLEALAFSTCFLSATLIFSPS*WVMQTS
Trigger: TGAGGTCTGCATCACCCATCAGGAAGGGGAAAAGAT...AAGAGTTGCAGAAAGGAAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACATCTTTTCCCCTTCCTaGTGGGTGATGCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNIFSPS*WVMQTS
Trigger: TGAGGTCTGCATCACCCATCAGGAAGGGGAAAAGAT...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGTCTCTTGCAGGTGCCTaGAACTTCTTCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWSLAGA*NFFIAL
Trigger: CAAAGCAATGAAGAAGTTTCAGGCACCTGCAAGAGA...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGAACTTCGGGCTTGCTaGTTTCGTCTTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQELRAC*FRLQEA
Trigger: GGCCTCCTGAAGACGAAATCAGCAAGCCCGAAGTTC...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAATGAAGCTGCTACAGTaGATGGGCGGCTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQMKLLQ*MGGFFP
Trigger: AGGAAAGAAGCCGCCCATTCACTGTAGCAGCTTCAT...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGAGAGGTGCTTTGAAATaGAGCTGCTACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQRGALK*SCYSEW
Trigger: CCATTCACTGTAGCAGCTTCATTTCAAAGCACCTCT...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAAGAGGTGCTTTGAAATaGAGCTGCTACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLRGALK*SCYSEW
Trigger: CCATTCACTGTAGCAGCTTCATTTCAAAGCACCTCT...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGCAGTTTTTGGGCTCTTaGCAGAGGTGCTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQQFLGS*QRCFEM
Trigger: CATTTCAAAGCACCTCTGTCAAGAGCCCAAAAACTG...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp AGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCAGGAGTGGAGATTGTTGTTTaGGGAAGCTGTTATCATCTT +
Preference number: 4 (lower is better)
Translates to: RSRSTSSGTSGLLISSSGVEIVV*GSCYHL
Trigger: AAGATGATAACAGCTTCCTCAAACAACAATCTCCAC...TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACCCACAGAGAGCTCTTTaGCCACTTCTCCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDPQRAL*PLLPPR
Trigger: TCTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGG...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCACCACAGAGAGCTCTTTaGCCACTTCTCCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCAPQRAL*PLLPPR
Trigger: TCTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGG...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCATGTGCATCACATTTTaGCAAAGGGCAGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGMCITF*QRAVAR
Trigger: GCGAGCCACTGCCCTTTGTCAAAATGTGATGCACAT...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCCACCAGGTCAATaGAAGGAATGTGAGTATGAC +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQWPPGQ*KECEYD
Trigger: GTCATACTCACATTCCTTTCATTGACCTGGTGGCCA...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR TCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCCTTTTCTGTTCTCTGTaGATCTTTAGGCATGGGAGG +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPLFCSL*IFRHGR
Trigger: CCTCCCATGCCTAAAGATTCACAGAGAACAGAAAAG...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR TCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCTCTTGCAGGTGCCTaGAACTTCATTGCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQSLAGA*NFIALG
Trigger: TCCCAAAGCAATGAAGTTTCAGGCACCTGCAAGAGA...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552491.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGCAGGAGGATGGTCTaGTCTGTGCCTAATCTCAGT +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLSRRMV*SVPNLS
Trigger: ACTGAGATTAGGCACAGAGCAGACCATCCTCCTGCT...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR GCA 90 bp ATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATACGATCTTCCTTCCACTTaGACTTCGGCTTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ITRKESNHLEYSKFTGRYDLPST*TSALGP
Trigger: CGGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATC...GTATCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAGGGGTGGAACGGACTaGCAGGCTATTCTCATTTGC +
Preference number: 4 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCRGGTD*QAILIC
Trigger: GCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCT...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTGGTCTCCCTTGCATTTaGAAGCTGGGCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFGLPCI*KLGWSL
Trigger: GAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACC...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCAGGTCTCCCTTGCATTTaGAAGCTGGGCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LSTLILPFGNTVESGLLSGLPCI*KLGWSL
Trigger: GAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACC...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAGGTCTCCCTTGCATTTaGAAGCTGGGCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCAGLPCI*KLGWSL
Trigger: GAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACC...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATGTGAGGGGTCTCCCTTaGATTTGCAAGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHVRGLP*ICKLGW
Trigger: CCAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCAC...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACACAGACTCTTCACTCTaGTCTGACATGCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNTDSSL*SDMLQP
Trigger: AGGCTGGAGCATGTCAGAGCAGAGTGAAGAGTCTGT...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCACAGACTCTTCACTCTaGTCTGACATGCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGTDSSL*SDMLQP
Trigger: AGGCTGGAGCATGTCAGAGCAGAGTGAAGAGTCTGT...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGAACAGACTCTTCACTCTaGTCTGACATGCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GFSIASKSALLYYTSGRRTDSSL*SDMLQP
Trigger: AGGCTGGAGCATGTCAGAGCAGAGTGAAGAGTCTGT...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCCACTTGTTTCCTTTCTaGAACTCTTCCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPHLFPF*NSSTHR
Trigger: TCTGTGGGTGGAAGAGTTGCAGAAAGGAAACAAGTG...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCTCATGCTGGGATACCTaGTTATGTGCATCACATTTT +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLSCWDT*LCASHF
Trigger: AAAATGTGATGCACATAAGCAGGTATCCCAGCATGA...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGAAGCCACGTGTGGTGGTaGACACTTGTAATCCCAGTT +
Preference number: 4 (lower is better)
Translates to: GFSIASKSALLYYTSGRRSHVWW*TLVIPV
Trigger: AACTGGGATTACAAGTGTGCACCACCACACGTGGCT...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR CCA 90 bp ATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATACCTCTGCTCCCAGCCCTaGGTTCTCCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ITRKESNHLEYSKFTGRYLCSQP*VLPLLL
Trigger: AAGAAGAAGTGGGAGAACCCAGGGCTGGGAGCAGAG...GTATCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR CCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACCTTCTTGGTCAGCTTTaGCTCCAGAAGCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDLLGQL*LQKQRG
Trigger: GCCACGCTGCTTCTGGAGCCAAAGCTGACCAAGAAG...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCCTTGCACTTCGGCTTTaGGCCCGGAGAATCTTAGTT +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGLALRL*ARRILV
Trigger: AACTAAGATTCTCCGGGCCCAAAGCCGAAGTGCAAG...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCTTGGACACAGCTGCCTaGTACTTGGCCATTCGATCC +
Preference number: 4 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCLDTAA*YLAIRS
Trigger: GGATCGAATGGCCAAGTACCAGGCAGCTGTGTCCAA...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TGTTTTTCCCACATTCCCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTTTGGACACAGCTGCCTaGTACTTGGCCATTCGATCC +
Preference number: 4 (lower is better)
Translates to: CFSHIPILLRSLGIFHLFLDTAA*YLAIRS
Trigger: GGATCGAATGGCCAAGTACCAGGCAGCTGTGTCCAA...AAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGGGAATGTGGGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTCATTTGTATAGTTaGTTGAGCTGCTTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLAHLYS*LSCFVW
Trigger: CCAAACAAAGCAGCTCAACCAACTATACAAATGAGC...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGAGCAGACCTCAGGACCTaGGGGCACATTCTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: DITRKESNHLEYSKFTGRADLRT*GHILLL
Trigger: CAAAAGGAGAATGTGCCCCCAGGTCCTGAGGTCTGC...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCCAAGAGACGCTCCATTaGATAGACTGTCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPQETLH*IDCLLT
Trigger: TGTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTG...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTACAAGAGACGCTCCATTaGATAGACTGTCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLQETLH*IDCLLT
Trigger: TGTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTG...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCATTTGCAAGCTGGGCTaGTCTCTCCAAAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPICKLG*SLQNLF
Trigger: GAAGAGATTTTGGAGAGACCAGCCCAGCTTGCAAAT...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCTTGCATTTGCAAGCTaGGCTGGTCTCTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRLAFAS*AGLSKI
Trigger: GATTTTGGAGAGACCAGCCCAGCTTGCAAATGCAAG...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATCCTCAGGACGATCCTCAGCTTCTTaGTTTCAGCTGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: FSEEDRLSFFRSRSTSSGRSSAS*FQLACL
Trigger: AAGACAAGCCAGCTGAAACCAAGAAGCTGAGGATCG...TCCTGAGGATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTAACTTCCAAGTTCAGTaGGGGGTGGCCAGGCGATCC +
Preference number: 4 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCNFQVQ*GVARRS
Trigger: GGATCGCCTGGCCACCCCCCACTGAACTTGGAAGTT...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTATGGGGACACAGTTTTTaGGCTCTTGACAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLWGHSF*ALDRGA
Trigger: AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCA...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCTGGGGACACAGTTTTTaGGCTCTTGACAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGWGHSF*ALDRGA
Trigger: AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCA...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACTGGGGACACAGTTTTTaGGCTCTTGACAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNWGHSF*ALDRGA
Trigger: AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCA...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCAGACTTGGGTTCTTGTaGAGATTGTTGTTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLRLGFL*RLLFEE
Trigger: TTCCTCAAACAACAATCTCCACAAGAACCCAAGTCT...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TTCCACGCAGGTCTCTCTTGCAGGTGCCTGAAACTTATTAGGAGGAAAGTGGAAAGACTTGGGTTCTTGTaGAGATTGTTGTTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: FHAGLSCRCLKLIRRKVERLGFL*RLLFEE
Trigger: TTCCTCAAACAACAATCTCCACAAGAACCCAAGTCT...TTCCACTTTCCTCCTAATAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACAAGACTTGGGTTCTTGTaGAGATTGTTGTTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTRLGFL*RLLFEE
Trigger: TTCCTCAAACAACAATCTCCACAAGAACCCAAGTCT...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTATTTGACAAAGGGCAGTaGCTCGCTAACACTAACATG +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLFDKGQ*LANTNM
Trigger: CATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAA...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGTTTGACAAAGGGCAGTaGCTCGCTAACACTAACATG +
Preference number: 4 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWFDKGQ*LANTNM
Trigger: CATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAA...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCCCGAAGAGTGTAGGTTaGTTTTTCAATTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLPKSVG*FFNCLK
Trigger: TTTGAGGCAATTGAAAAACCAACCTACACTCTTCGG...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGATACAAAAGCTTATTTaGGAGACAGCAGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSIQKLI*ETADLS
Trigger: AGAGAGATCTGCTGTCTCCCAAATAAGCTTTTGTAT...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTAACCTGGGAGTCACCTaGGGAGTCATCTTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCNLGVT*GVIFGR
Trigger: CCTGCCGAAGATGACTCCCCAGGTGACTCCCAGGTT...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394943.7
ENST00000552783.5
CDS-3UTR TCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGCTTGTCTACAGACACTaGAATACCTGGCTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQLVYRH*NTWLKA
Trigger: GGCTTTTAGCCAGGTATTTCAGTGTCTGTAGACAAG...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR TCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTACGGAGAATCTTAGTTTaGGTTGGTTCACCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLRRILV*VGSPFS
Trigger: TGAGAAAGGTGAACCAACTCAAACTAAGATTCTCCG...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCGGAGAATCTTAGTTTaGGTTGGTTCACCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWRRILV*VGSPFS
Trigger: TGAGAAAGGTGAACCAACTCAAACTAAGATTCTCCG...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TTCAGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCACCATTTTATGAATTTTaGTTTCGCCACCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: FRSRSTSSGTSGLLISSSPFYEF*FRHHWL
Trigger: AAGCCAGTGGTGGCGAAATCAAAATTCATAAAATGG...TGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAGGATGGACAGGCTGTTaGACCTCACTCTTAACCTGG +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCAGWTGC*TSLLTW
Trigger: CCAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCC...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTAGCAACGGAAGCAGCTaGTGTGAAACACCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFSNGSS*CETPAG
Trigger: ACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGCT...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAGCAACGGAAGCAGCTaGTGTGAAACACCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDSNGSS*CETPAG
Trigger: ACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGCT...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp ATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATACCTCCAAGGCACTTCCTaGACTTCCAAGTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: ITRKESNHLEYSKFTGRYLQGTS*TSKFSG
Trigger: CCCACTGAACTTGGAAGTTCAGGAAGTGCCTTGGAG...GTATCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGACTCCAAGGCACTTCCTaGACTTCCAAGTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: DITRKESNHLEYSKFTGRLQGTS*TSKFSG
Trigger: CCCACTGAACTTGGAAGTTCAGGAAGTGCCTTGGAG...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGATGAAGCTGCTACAGTaGATGGGCGGCTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: NYISCWDTCLCASHFDKGMKLLQ*MGGFFP
Trigger: AGGAAAGAAGCCGCCCATTCACTGTAGCAGCTTCAT...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGAGAGGTGCTTTGAAATaGAGCTGCTACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQRGALK*SCYSEW
Trigger: CCATTCACTGTAGCAGCTTCATTTCAAAGCACCTCT...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCGCCTGGCGAACATGGTaGAATCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGAWRTW*NPVSTK
Trigger: TTTAGTAGAGACAGGATTTCACCATGTTCGCCAGGC...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR GCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACAGATTTTTCTACTTCATaGCTGGATTCTCCTAGACAA +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTDFSTS*LDSPRQ
Trigger: TTGTCTAGGAGAATCCAGGCATGAAGTAGAAAAATC...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGATCTTCCTTCCACTTaGACTTCGGCTTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCDLPST*TSALGP
Trigger: CGGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATC...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAGGGGTGGAACGGACTaGCAGGCTATTCTCATTTGC +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDRGGTD*QAILIC
Trigger: GCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCT...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCAAGGGGTGGAACGGACTaGCAGGCTATTCTCATTTGC +
Preference number: 4 (lower is better)
Translates to: LSTLILPFGNTVESGLLSRGGTD*QAILIC
Trigger: GCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCT...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCCACGCAGGTCTCTCTTaGAGGTGCCTGAAACTTCTT +
Preference number: 4 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCHAGLS*RCLKLL
Trigger: AAGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTG...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGGTCTCCCTTGCATTTaGAAGCTGGGCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: FQVNYISCWDTCLCASHFGLPCI*KLGWSL
Trigger: GAGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACC...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCACTTGGCTTCCATACTTaGAGCCAGGACACCCACCTT +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCALGFHT*SQDTHL
Trigger: AAGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAG...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp GGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCTACAAAACTCTTGGCTTCCATACTTaGAGCCAGGACACCCACCTT +
Preference number: 4 (lower is better)
Translates to: GFLILSSEFFSKGVVYKTLGFHT*SQDTHL
Trigger: AAGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAG...AGTTTTGTAGACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGCACTTGTTTCCTTTCTaGAACTCTTCCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQHLFPF*NSSTHR
Trigger: TCTGTGGGTGGAAGAGTTGCAGAAAGGAAACAAGTG...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAAATTGCCTCAAAAAGTaGTCTGTTGTATTATACCTC +
Preference number: 4 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLNCLKK*SVVLYL
Trigger: GAGGTATAATACAACAGAGCACTTTTTGAGGCAATT...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGCAGGGGAAAGGAGATaGCAAGTGCCAATAATAGAA +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSAGERR*QVPIIE
Trigger: TTCTATTATTGGCACTTGGCATCTCCTTTCCCCTGC...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR GCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCTGCCTGAAACTTCATTaGTTTGGGAGGAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPCLKLH*FGRRTF
Trigger: GAAAGTTCTCCTCCCAAAGCAATGAAGTTTCAGGCA...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552491.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTACCCTTTCTAAAGTGCTaGGAGAGATTTTCGGTGTTA +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLPFLKC*ERFSVL
Trigger: TAACACCGAAAATCTCTCCCAGCACTTTAGAAAGGG...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATCTCTGCTCCCAGCCCTaGGTTCTCCCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHLCSQP*VLPLLL
Trigger: AAGAAGAAGTGGGAGAACCCAGGGCTGGGAGCAGAG...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR CCA 90 bp ATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATACTTGGACACAGCTGCCTaGTACTTGGCCATTCGATCC +
Preference number: 4 (lower is better)
Translates to: ITRKESNHLEYSKFTGRYLDTAA*YLAIRS
Trigger: GGATCGAATGGCCAAGTACCAGGCAGCTGTGTCCAA...GTATCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATTGGACACAGCTGCCTaGTACTTGGCCATTCGATCC +
Preference number: 4 (lower is better)
Translates to: DITRKESNHLEYSKFTGRLDTAA*YLAIRS
Trigger: GGATCGAATGGCCAAGTACCAGGCAGCTGTGTCCAA...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTGCTCATTTGTATAGTTaGTTGAGCTGCTTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIAHLYS*LSCFVW
Trigger: CCAAACAAAGCAGCTCAACCAACTATACAAATGAGC...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CGTTTTCATTTTTGCTTGCCCATAGATCCTTGTGTGGTCTGTGCCCAAAGCCTTGCTCATTTGTATAGTTaGTTGAGCTGCTTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: RFHFCLPIDPCVVCAQSLAHLYS*LSCFVW
Trigger: CCAAACAAAGCAGCTCAACCAACTATACAAATGAGC...AAGGCTTTGGGCACAGACCACACAAGGATCTATGGGCAAGCAAAAATGAAAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCTGGACTTAGTGGCTTaGGATGGACAGGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: NYISCWDTCLCASHFDKGLDLVA*DGQAVE
Trigger: TTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAG...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAAAGACTGGAGGCTCTaGAATCTGGACTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGKDWRL*NLDLVA
Trigger: AGCCACTAAGTCCAGATTCCAGAGCCTCCAGTCTTT...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGCAAGAGACGCTCCATTaGATAGACTGTCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQQETLH*IDCLLT
Trigger: TGTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTG...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CACATCCTGGGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCCAAGAGACGCTCCATTaGATAGACTGTCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: HILGFLILSSEFFSKGVVQETLH*IDCLLT
Trigger: TGTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTG...GACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCCCAGGATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGAAACACCTGCTGGTTaGCCAAGAGACGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQETPAG*PRDAPL
Trigger: CAATGGAGCGTCTCTTGGCCAACCAGCAGGTGTTTC...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp ATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATACGAAACACCTGCTGGTTaGCCAAGAGACGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: ITRKESNHLEYSKFTGRYETPAG*PRDAPL
Trigger: CAATGGAGCGTCTCTTGGCCAACCAGCAGGTGTTTC...GTATCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGAGAAACACCTGCTGGTTaGCCAAGAGACGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: DITRKESNHLEYSKFTGRETPAG*PRDAPL
Trigger: CAATGGAGCGTCTCTTGGCCAACCAGCAGGTGTTTC...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCAATTTGCAAGCTGGGCTaGTCTCTCCAAAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: RIWAIIRWNISPVTSLTAICKLG*SLQNLF
Trigger: GAAGAGATTTTGGAGAGACCAGCCCAGCTTGCAAAT...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAACTTGCATTTGCAAGCTaGGCTGGTCTCTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQLAFAS*AGLSKI
Trigger: GATTTTGGAGAGACCAGCCCAGCTTGCAAATGCAAG...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCCTTCTTGGTTTCAGCTaGCTTGTCTTCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGLLGFS*LVFLLL
Trigger: CAGGAGAAGGAAGACAAGCCAGCTGAAACCAAGAAG...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GCTAACACTAACATGAATTTAAGGCCCAGCATCATTGCAATTTGTCACTCTTCAAGCTGCTACAGTGAATaGGCGGCTTCTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ANTNMNLRPSIIAICHSSSCYSE*AASFLQ
Trigger: CTGAAGGAAAGAAGCCGCCCATTCACTGTAGCAGCT...TGAAGAGTGACAAATTGCAATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCTGGGGACACAGTTTTTaGGCTCTTGACAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCWGHSF*ALDRGA
Trigger: AGCACCTCTGTCAAGAGCCCAAAAACTGTGTCCCCA...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGGCCTTTCCTGATAGGTaGGGACACAGTTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: NYISCWDTCLCASHFDKGAFPDR*GHSFWA
Trigger: AGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGC...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCAATTACATTTCATGCTaGGATACCTGCTTATGTGCA +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLNYISC*DTCLCA
Trigger: TGCACATAAGCAGGTATCCCAGCATGAAATGTAATT...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACAGAATACAGTAGAATCTaGGCTATTATCAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTEYSRI*AIIRWN
Trigger: ATTCCACCTGATAATAGCCCAGATTCTACTGTATTC...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTCCGAAGAGTGTAGGTTaGTTTTTCAATTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIPKSVG*FFNCLK
Trigger: TTTGAGGCAATTGAAAAACCAACCTACACTCTTCGG...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGAGGTCTGAGCTCAAGTaGTGTAAGACAGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWRSELK*CKTVLS
Trigger: AGAAAGAACTGTCTTACACCACTTGAGCTCAGACCT...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATTACAGCCTTGCCACATaGAGAAAGCATCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHYSLAT*RKHPPG
Trigger: GCCGGGTGGATGCTTTCTCCATGTGGCAAGGCTGTA...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552783.5
3UTR CAA 72 bp AGACAGCAGATCTCTCTAAGCACCGAAGAGTGTAGGTaGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RQQISLSTEECR*VFQLPQKVLCC
Trigger: ACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACACTCTTCGGTGCTTAGAGAGATCTGCTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp CCCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTCCTTTCTGCAACTCTTTCCACAATAGCCGATaGCTTGTTCTTGTTGACAAG +
Preference number: 4 (lower is better)
Translates to: PILLRSLGIFHLFPFCNSFHNSR*LVLVDK
Trigger: CTTGTCAACAAGAACAAGTCATCGGCTATTGTGGAA...AGAGTTGCAGAAAGGAAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCGGAGAATCTTAGTTTaGGTTGGTTCACCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSRRILV*VGSPFS
Trigger: TGAGAAAGGTGAACCAACTCAAACTAAGATTCTCCG...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TTCTTTCCTTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATCTTTATAGAGGTTTCTaGGAGGCGTGGAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: FFPSVKKIVLASSDLDRHLYRGF*EAWKFQ
Trigger: CTGGAACTTCCACGCCTCTCAGAAACCTCTATAAAG...ATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAAGGAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTATTTGTATAGTTGGTTaGGCTGCTTTGTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFICIVG*AALFGH
Trigger: GTGTCCAAACAAAGCAGCTCAACCAACTATACAAAT...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAATTTGTATAGTTGGTTaGGCTGCTTTGTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLICIVG*AALFGH
Trigger: GTGTCCAAACAAAGCAGCTCAACCAACTATACAAAT...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGCCATTTTATGAATTTTaGTTTCGCCACCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQPFYEF*FRHHWL
Trigger: AAGCCAGTGGTGGCGAAATCAAAATTCATAAAATGG...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCCATTTTATGAATTTTaGTTTCGCCACCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWPFYEF*FRHHWL
Trigger: AAGCCAGTGGTGGCGAAATCAAAATTCATAAAATGG...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAATCTTTTCCCCTTCCTaGTGGGTGATGCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCAIFSPS*WVMQTS
Trigger: TGAGGTCTGCATCACCCATCAGGAAGGGGAAAAGAT...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGATCTTTTCCCCTTCCTaGTGGGTGATGCAGACCTCA +
Preference number: 4 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQIFSPS*WVMQTS
Trigger: TGAGGTCTGCATCACCCATCAGGAAGGGGAAAAGAT...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCTCTCTTGCAGGTGCCTaGAACTTCTTCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGSLAGA*NFFIAL
Trigger: CAAAGCAATGAAGAAGTTTCAGGCACCTGCAAGAGA...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCCATATGTTCCTAGACTaGGTTTGTTGTTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPHMFLD*VCCCNR
Trigger: CCTATTGCAACAACAAACTCAGTCTAGGAACATATG...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATCTCCAAGGCACTTCCTaGACTTCCAAGTTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHLQGTS*TSKFSG
Trigger: CCCACTGAACTTGGAAGTTCAGGAAGTGCCTTGGAG...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACAGAGGTGCTTTGAAATaGAGCTGCTACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNRGALK*SCYSEW
Trigger: CCATTCACTGTAGCAGCTTCATTTCAAAGCACCTCT...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGGTGGAGATTGTTGTTTaGGGAAGCTGTTATCATCTT +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQVEIVV*GSCYHL
Trigger: AAGATGATAACAGCTTCCTCAAACAACAATCTCCAC...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCGTCCCCTTTCTAAAGTaGTGGGAGAGATTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCVPFLK*WERFSV
Trigger: CACCGAAAATCTCTCCCAGCACTTTAGAAAGGGGAC...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR GCA 90 bp GAATTCTTCAGCAAAGGTGTTGTCTACAAAACTCGACCAATTCAGAGACTTGGGTATAGTTGGTTGAGCTaGTTTGTTTGGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: EFFSKGVVYKTRPIQRLGYSWLS*FVWTQL
Trigger: CAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATA...CCCAAGTCTCTGAATTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTCAGGCTATTCTCATTTaGAGAAATCTTTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFQAILI*RNLFPF
Trigger: GAAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTG...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCACACGCAGGTCTCTCTTaGAGGTGCCTGAAACTTCTT +
Preference number: 4 (lower is better)
Translates to: LSTLILPFGNTVESGLLSHAGLS*RCLKLL
Trigger: AAGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTG...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTCTTGGCTTCCATACTTaGAGCCAGGACACCCACCTT +
Preference number: 4 (lower is better)
Translates to: FQVNYISCWDTCLCASHFLGFHT*SQDTHL
Trigger: AAGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAG...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATCTTGGCTTCCATACTTaGAGCCAGGACACCCACCTT +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHLGFHT*SQDTHL
Trigger: AAGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAG...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTACAGACTCTTCACTCTaGTCTGACATGCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFTDSSL*SDMLQP
Trigger: AGGCTGGAGCATGTCAGAGCAGAGTGAAGAGTCTGT...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGTCATGCTGGGATACCTaGTTATGTGCATCACATTTT +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQSCWDT*LCASHF
Trigger: AAAATGTGATGCACATAAGCAGGTATCCCAGCATGA...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCTCATGCTGGGATACCTaGTTATGTGCATCACATTTT +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPSCWDT*LCASHF
Trigger: AAAATGTGATGCACATAAGCAGGTATCCCAGCATGA...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTATTAAACTCTTCACTTTaGTCTAACACGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLLNSSL*SNTEDG
Trigger: CCCATCTTCCGTGTTAGAGCAAAGTGAAGAGTTTAA...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TTCTTTCCTTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATCACGCAGGTCTCTCTTaGAGGTGCCTGAAACTTATT +
Preference number: 4 (lower is better)
Translates to: FFPSVKKIVLASSDLDRHHAGLS*RCLKLI
Trigger: AATAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTG...ATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAAGGAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTTGCCTGAAACTTCATTaGTTTGGGAGGAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSCLKLH*FGRRTF
Trigger: GAAAGTTCTCCTCCCAAAGCAATGAAGTTTCAGGCA...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552491.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTTCTTCAGCTGCTTTCTaGTACTTGGAGAATATTTCC +
Preference number: 4 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFSSAAF*YLENIS
Trigger: GGAAATATTCTCCAAGTACCAGAAAGCAGCTGAAGA...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCTCTTCAGCTGCTTTCTaGTACTTGGAGAATATTTCC +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPSSAAF*YLENIS
Trigger: GGAAATATTCTCCAAGTACCAGAAAGCAGCTGAAGA...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CCA 90 bp CACATCCTGGGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCCCCTTTCTAAAGTGCTaGGAGAGATTTTCGGTGTTA +
Preference number: 4 (lower is better)
Translates to: HILGFLILSSEFFSKGVVPFLKC*ERFSVL
Trigger: TAACACCGAAAATCTCTCCCAGCACTTTAGAAAGGG...GACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCCCAGGATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGAACTTCAGCAGGAGGATaGTCTGCTCTGTGCCTAATC +
Preference number: 4 (lower is better)
Translates to: DITRKESNHLEYSKFTGRTSAGG*SALCLI
Trigger: GATTAGGCACAGAGCAGACCATCCTCCTGCTGAAGT...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR CCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGACTTCAGCAGGAGGATaGTCTGCTCTGTGCCTAATC +
Preference number: 4 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQTSAGG*SALCLI
Trigger: GATTAGGCACAGAGCAGACCATCCTCCTGCTGAAGT...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR CCA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGTTACTTTCTGTTGAGTaGTCTTTAAGATCCTCACCG +
Preference number: 4 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWLLSVE*SLRSSP
Trigger: CGGTGAGGATCTTAAAGACCACTCAACAGAAAGTAA...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGCTTGCACTTCGGCTTTaGGCCCGGAGAATCTTAGTT +
Preference number: 4 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQLALRL*ARRILV
Trigger: AACTAAGATTCTCCGGGCCCAAAGCCGAAGTGCAAG...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTGCTCATTTGTATAGTTaGTTGAGCTGCTTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFAHLYS*LSCFVW
Trigger: CCAAACAAAGCAGCTCAACCAACTATACAAATGAGC...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGACCTCACTCTTAACCTaGGAGTCACGGGAGTCATCT +
Preference number: 4 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQTSLLT*ESRESS
Trigger: AGATGACTCCCGTGACTCCCAGGTTAAGAGTGAGGT...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000547825.5
ENST00000552491.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAACCTCACTCTTAACCTaGGAGTCACGGGAGTCATCT +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCATSLLT*ESRESS
Trigger: AGATGACTCCCGTGACTCCCAGGTTAAGAGTGAGGT...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000547825.5
ENST00000552491.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATACCTGGACTTAGTGGCTTaGGATGGACAGGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: ITRKESNHLEYSKFTGRYLDLVA*DGQAVE
Trigger: TTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAG...GTATCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCACTTCTTCATTGCTTTaGGAGGAGAACTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSTSSLL*EENFQK
Trigger: TTTCTGAAAGTTCTCCTCCCAAAGCAATGAAGAAGT...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGACAAGAGACGCTCCATTaGATAGACTGTCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: GFSIASKSALLYYTSGRRQETLH*IDCLLT
Trigger: TGTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTG...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAATTTGCAAGCTGGGCTaGTCTCTCCAAAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQICKLG*SLQNLF
Trigger: GAAGAGATTTTGGAGAGACCAGCCCAGCTTGCAAAT...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TTCTTTCCTTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATCTTCTTGGTTTCAGCTaGCTTGTCTTCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FFPSVKKIVLASSDLDRHLLGFS*LVFLLL
Trigger: CAGGAGAAGGAAGACAAGCCAGCTGAAACCAAGAAG...ATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAAGGAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGAAGCTGCTACAGTGAATaGGCGGCTTCTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: DITRKESNHLEYSKFTGRSCYSE*AASFLQ
Trigger: CTGAAGGAAAGAAGCCGCCCATTCACTGTAGCAGCT...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACGCCTTTCCTGATAGGTaGGGACACAGTTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDAFPDR*GHSFWA
Trigger: AGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGC...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp GGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCTACAAAACTGCCTTTCCTGATAGGTaGGGACACAGTTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GFLILSSEFFSKGVVYKTAFPDR*GHSFWA
Trigger: AGCCCAAAAACTGTGTCCCCACCTATCAGGAAAGGC...AGTTTTGTAGACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGACTTGGGTTCTTGTaGAGATTGTTGTTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPRLGFL*RLLFEE
Trigger: TTCCTCAAACAACAATCTCCACAAGAACCCAAGTCT...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACTTTGACAAAGGGCAGTaGCTCGCTAACACTAACATG +
Preference number: 4 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNFDKGQ*LANTNM
Trigger: CATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAA...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCGAATACAGTAGAATCTaGGCTATTATCAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSEYSRI*AIIRWN
Trigger: ATTCCACCTGATAATAGCCCAGATTCTACTGTATTC...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCCTTAATATTGCCTTTTaGGAATACAGTAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLLNIAF*EYSRIW
Trigger: CCAGATTCTACTGTATTCCCAAAAGGCAATATTAAG...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTTAATATTGCCTTTTaGGAATACAGTAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTLNIAF*EYSRIW
Trigger: CCAGATTCTACTGTATTCCCAAAAGGCAATATTAAG...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTAGGTCTGAGCTCAAGTaGTGTAAGACAGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSRSELK*CKTVLS
Trigger: AGAAAGAACTGTCTTACACCACTTGAGCTCAGACCT...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACAAAAAAGGCCTATAGTTaGTTTAATTTCACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTKKAYS*FNFTLR
Trigger: TCTCAGGGTGAAATTAAACCAACTATAGGCCTTTTT...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCAAAAAGGCCTATAGTTaGTTTAATTTCACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLKKAYS*FNFTLR
Trigger: TCTCAGGGTGAAATTAAACCAACTATAGGCCTTTTT...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGAAAATTAGCCACGTGTaGTGGTGCACACTTGTAATC +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQKISHV*WCTLVI
Trigger: GATTACAAGTGTGCACCACCACACGTGGCTAATTTT...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR CCA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGACCCTTTCTAAAGTGCTaGGAGAGATTTTCGGTGTTC +
Preference number: 4 (lower is better)
Translates to: GFSIASKSALLYYTSGRRPFLKC*ERFSVF
Trigger: GAACACCGAAAATCTCTCCCAGCACTTTAGAAAGGG...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552783.5
CDS-3UTR TCA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACCGGAGAATCTTAGTTTaGGTTGGTTCACCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNRRILV*VGSPFS
Trigger: TGAGAAAGGTGAACCAACTCAAACTAAGATTCTCCG...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGACTTTATAGAGGTTTCTaGGAGGCGTGGAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: DITRKESNHLEYSKFTGRLYRGF*EAWKFQ
Trigger: CTGGAACTTCCACGCCTCTCAGAAACCTCTATAAAG...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGCCATTTTATGAATTTTaGTTTCGCCACCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQPFYEF*FRHHWL
Trigger: AAGCCAGTGGTGGCGAAATCAAAATTCATAAAATGG...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCACATATGTTCCTAGACTaGGTTTGTTGTTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: RIWAIIRWNISPVTSLTAHMFLD*VCCCNR
Trigger: CCTATTGCAACAACAAACTCAGTCTAGGAACATATG...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTATGAAGCTGCTACAGTaGATGGGCGGCTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FQVNYISCWDTCLCASHFMKLLQ*MGGFFP
Trigger: AGGAAAGAAGCCGCCCATTCACTGTAGCAGCTTCAT...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTTTTTGGGCTCTTaGCAGAGGTGCTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: NYISCWDTCLCASHFDKGQFLGS*QRCFEM
Trigger: CATTTCAAAGCACCTCTGTCAAGAGCCCAAAAACTG...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGGTGGAGATTGTTGTTTaGGGAAGCTGTTATCATCTT +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQVEIVV*GSCYHL
Trigger: AAGATGATAACAGCTTCCTCAAACAACAATCTCCAC...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCATACAACATTCTTGTaGTTCACTCTTCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSHTTFL*FTLLAA
Trigger: TGCTGCTAGAAGAGTGAATCACAAGAATGTTGTATG...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR GCA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCAGTCCCCTTTCTAAAGTaGTGGGAGAGATTTTCGGTG +
Preference number: 4 (lower is better)
Translates to: LSTLILPFGNTVESGLLSVPFLK*WERFSV
Trigger: CACCGAAAATCTCTCCCAGCACTTTAGAAAGGGGAC...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
CDS-3UTR GCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAGATTTTTCTACTTCATaGCTGGATTCTCCTAGACAA +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLDFSTS*LDSPRQ
Trigger: TTGTCTAGGAGAATCCAGGCATGAAGTAGAAAAATC...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCACAGGCTATTCTCATTTaGAGAAATCTTTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RIWAIIRWNISPVTSLTAQAILI*RNLFPF
Trigger: GAAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTG...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CCCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTCCTTTCTGCAACTCTCAGGCTATTCTCATTTaGAGAAATCTTTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PILLRSLGIFHLFPFCNSQAILI*RNLFPF
Trigger: GAAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTG...AGAGTTGCAGAAAGGAAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCAGGCTATTCTCATTTaGAGAAATCTTTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRQAILI*RNLFPF
Trigger: GAAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTG...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCACTGAAACTTCTTCATTaGTTTGGGAGGAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: RIWAIIRWNISPVTSLTALKLLH*FGRRTF
Trigger: GAAAGTTCTCCTCCCAAAGCAATGAAGAAGTTTCAG...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCTGAAACTTCTTCATTaGTTTGGGAGGAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSLKLLH*FGRRTF
Trigger: GAAAGTTCTCCTCCCAAAGCAATGAAGAAGTTTCAG...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTACAGACTCTTCACTCTaGTCTGACATGCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FQVNYISCWDTCLCASHFTDSSL*SDMLQP
Trigger: AGGCTGGAGCATGTCAGAGCAGAGTGAAGAGTCTGT...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCATCTTCATCGGAGTCTaGACCATTTTCTACAAGATT +
Preference number: 4 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPIFIGV*TIFYKI
Trigger: AATCTTGTAGAAAATGGTGCAGACTCCGATGAAGAT...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAATCTTCATCGGAGTCTaGACCATTTTCTACAAGATT +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLIFIGV*TIFYKI
Trigger: AATCTTGTAGAAAATGGTGCAGACTCCGATGAAGAT...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTATCTTCATCGGAGTCTaGACCATTTTCTACAAGATT +
Preference number: 4 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFIFIGV*TIFYKI
Trigger: AATCTTGTAGAAAATGGTGCAGACTCCGATGAAGAT...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCATGCTGGGATACCTaGTTATGTGCATCACATTTT +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQSCWDT*LCASHF
Trigger: AAAATGTGATGCACATAAGCAGGTATCCCAGCATGA...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCATTAAACTCTTCACTTTaGTCTAACACGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: RIWAIIRWNISPVTSLTALNSSL*SNTEDG
Trigger: CCCATCTTCCGTGTTAGAGCAAAGTGAAGAGTTTAA...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTGAACAGTTACAGCCTTaGCACATGGAGAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFEQLQP*HMEKAS
Trigger: GGATGCTTTCTCCATGTGGCAAGGCTGTAACTGTTC...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552783.5
CDS-3UTR GCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGTTAAAACTCCAAGCTaGTCCTGGTCCACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQVKTPS*SWSTAV
Trigger: AACAGCAGTGGACCAGGAGCAGCTTGGAGTTTTAAC...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000552783.5
CDS-3UTR CCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGTCTAGATCTGGGGTaGATTTGTTCTTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLSLDLG*ICSSWS
Trigger: TGACCAAGAAGAACAAATCCACCCCAGATCTAGACT...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCTAGATCTGGGGTaGATTTGTTCTTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGSLDLG*ICSSWS
Trigger: TGACCAAGAAGAACAAATCCACCCCAGATCTAGACT...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTCTGGACTTAGTGGCTTaGGATGGACAGGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCLDLVA*DGQAVE
Trigger: TTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAG...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGACTGGAGGCTCTaGAATCTGGACTTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDKDWRL*NLDLVA
Trigger: AGCCACTAAGTCCAGATTCCAGAGCCTCCAGTCTTT...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TGTTTTTCCCACATTCCCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTATTTGCAAGCTGGGCTaGTCTCTCCAAAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: CFSHIPILLRSLGIFHLFICKLG*SLQNLF
Trigger: GAAGAGATTTTGGAGAGACCAGCCCAGCTTGCAAAT...AAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGGGAATGTGGGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCACTTCTTGGTTTCAGCTaGCTTGTCTTCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSTLILPFGNTVESGLLSLLGFS*LVFLLL
Trigger: CAGGAGAAGGAAGACAAGCCAGCTGAAACCAAGAAG...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTCTTCTTGGTTTCAGCTaGCTTGTCTTCCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFLLGFS*LVFLLL
Trigger: CAGGAGAAGGAAGACAAGCCAGCTGAAACCAAGAAG...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCACGATCCTCAGCTTCTTaGTTTCAGCTGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCARSSAS*FQLACL
Trigger: AAGACAAGCCAGCTGAAACCAAGAAGCTGAGGATCG...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCACGATCCTCAGCTTCTTaGTTTCAGCTGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LSTLILPFGNTVESGLLSRSSAS*FQLACL
Trigger: AAGACAAGCCAGCTGAAACCAAGAAGCTGAGGATCG...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTAGCTGCTACAGTGAATaGGCGGCTTCTTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: FQVNYISCWDTCLCASHFSCYSE*AASFLQ
Trigger: CTGAAGGAAAGAAGCCGCCCATTCACTGTAGCAGCT...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGAATTACATTTCATGCTaGGATACCTGCTTATGTGCA +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQNYISC*DTCLCA
Trigger: TGCACATAAGCAGGTATCCCAGCATGAAATGTAATT...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGATACAAAAGCTTATTTaGGAGACAGCAGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWIQKLI*ETADLS
Trigger: AGAGAGATCTGCTGTCTCCCAAATAAGCTTTTGTAT...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGATACAAAAGCTTATTTaGGAGACAGCAGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQIQKLI*ETADLS
Trigger: AGAGAGATCTGCTGTCTCCCAAATAAGCTTTTGTAT...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGTCTGAGCTCAAGTaGTGTAAGACAGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLRSELK*CKTVLS
Trigger: AGAAAGAACTGTCTTACACCACTTGAGCTCAGACCT...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGAAGGTCTGAGCTCAAGTaGTGTAAGACAGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GFSIASKSALLYYTSGRRRSELK*CKTVLS
Trigger: AGAAAGAACTGTCTTACACCACTTGAGCTCAGACCT...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACAGGTCTGAGCTCAAGTaGTGTAAGACAGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNRSELK*CKTVLS
Trigger: AGAAAGAACTGTCTTACACCACTTGAGCTCAGACCT...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCACTTGTCTACAGACACTaGAATACCTGGCTAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LSTLILPFGNTVESGLLSLVYRH*NTWLKA
Trigger: GGCTTTTAGCCAGGTATTTCAGTGTCTGTAGACAAG...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR TCA 90 bp TTCTTTCCTTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATCGGAGAATCTTAGTTTaGGTTGGTTCACCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FFPSVKKIVLASSDLDRHRRILV*VGSPFS
Trigger: TGAGAAAGGTGAACCAACTCAAACTAAGATTCTCCG...ATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAAGGAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR TCA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAATTTGTATAGTTGGTTaGGCTGCTTTGTTTGGACAC +
Preference number: 4 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQICIVG*AALFGH
Trigger: GTGTCCAAACAAAGCAGCTCAACCAACTATACAAAT...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAACCATTTTATGAATTTTaGTTTCGCCACCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQPFYEF*FRHHWL
Trigger: AAGCCAGTGGTGGCGAAATCAAAATTCATAAAATGG...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATCTCTTGCAGGTGCCTaGAACTTCTTCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: DITRKESNHLEYSKFTGRSLAGA*NFFIAL
Trigger: CAAAGCAATGAAGAAGTTTCAGGCACCTGCAAGAGA...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTACATATGTTCCTAGACTaGGTTTGTTGTTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLHMFLD*VCCCNR
Trigger: CCTATTGCAACAACAAACTCAGTCTAGGAACATATG...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGACATATGTTCCTAGACTaGGTTTGTTGTTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: GFSIASKSALLYYTSGRRHMFLD*VCCCNR
Trigger: CCTATTGCAACAACAAACTCAGTCTAGGAACATATG...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAAGAGGTGCTTTGAAATaGAGCTGCTACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCARGALK*SCYSEW
Trigger: CCATTCACTGTAGCAGCTTCATTTCAAAGCACCTCT...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACCAGTTTTTGGGCTCTTaGCAGAGGTGCTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDQFLGS*QRCFEM
Trigger: CATTTCAAAGCACCTCTGTCAAGAGCCCAAAAACTG...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACGTGGAGATTGTTGTTTaGGGAAGCTGTTATCATCTT +
Preference number: 4 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNVEIVV*GSCYHL
Trigger: AAGATGATAACAGCTTCCTCAAACAACAATCTCCAC...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAGTGGAGATTGTTGTTTaGGGAAGCTGTTATCATCTT +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLVEIVV*GSCYHL
Trigger: AAGATGATAACAGCTTCCTCAAACAACAATCTCCAC...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCAGATTTTTCTACTTCATaGCTGGATTCTCCTAGACAA +
Preference number: 4 (lower is better)
Translates to: RIWAIIRWNISPVTSLTADFSTS*LDSPRQ
Trigger: TTGTCTAGGAGAATCCAGGCATGAAGTAGAAAAATC...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CACATCCTGGGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCGATTTTTCTACTTCATaGCTGGATTCTCCTAGACAA +
Preference number: 4 (lower is better)
Translates to: HILGFLILSSEFFSKGVVDFSTS*LDSPRQ
Trigger: TTGTCTAGGAGAATCCAGGCATGAAGTAGAAAAATC...GACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCCCAGGATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGGATTTTTCTACTTCATaGCTGGATTCTCCTAGACAA +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQDFSTS*LDSPRQ
Trigger: TTGTCTAGGAGAATCCAGGCATGAAGTAGAAAAATC...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCCAGGCTATTCTCATTTaGAGAAATCTTTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGQAILI*RNLFPF
Trigger: GAAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTG...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAACTGAAACTTCTTCATTaGTTTGGGAGGAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQLKLLH*FGRRTF
Trigger: GAAAGTTCTCCTCCCAAAGCAATGAAGAAGTTTCAG...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTACTGAAACTTCTTCATTaGTTTGGGAGGAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLLKLLH*FGRRTF
Trigger: GAAAGTTCTCCTCCCAAAGCAATGAAGAAGTTTCAG...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTATCTTCATCGGAGTCTaGACCATTTTCTACAAGATT +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSIFIGV*TIFYKI
Trigger: AATCTTGTAGAAAATGGTGCAGACTCCGATGAAGAT...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACTCATGCTGGGATACCTaGTTATGTGCATCACATTTT +
Preference number: 4 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNSCWDT*LCASHF
Trigger: AAAATGTGATGCACATAAGCAGGTATCCCAGCATGA...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGATTAAACTCTTCACTTTaGTCTAACACGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: GFSIASKSALLYYTSGRRLNSSL*SNTEDG
Trigger: CCCATCTTCCGTGTTAGAGCAAAGTGAAGAGTTTAA...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTATTAAACTCTTCACTTTaGTCTAACACGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLLNSSL*SNTEDG
Trigger: CCCATCTTCCGTGTTAGAGCAAAGTGAAGAGTTTAA...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TTCTTTCCTTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATAGTCTAGATCTGGGGTaGATTTGTTCTTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: FFPSVKKIVLASSDLDRHSLDLG*ICSSWS
Trigger: TGACCAAGAAGAACAAATCCACCCCAGATCTAGACT...ATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAAGGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTATTACTTTCTGTTGAGTaGTCTTTAAGATCCTCACCG +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLLLSVE*SLRSSP
Trigger: CGGTGAGGATCTTAAAGACCACTCAACAGAAAGTAA...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATACCAAGAGACGCTCCATTaGATAGACTGTCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: ITRKESNHLEYSKFTGRYQETLH*IDCLLT
Trigger: TGTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTG...GTATCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAATTTGCAAGCTGGGCTaGTCTCTCCAAAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCAICKLG*SLQNLF
Trigger: GAAGAGATTTTGGAGAGACCAGCCCAGCTTGCAAAT...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATACATTTGCAAGCTGGGCTaGTCTCTCCAAAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: ITRKESNHLEYSKFTGRYICKLG*SLQNLF
Trigger: GAAGAGATTTTGGAGAGACCAGCCCAGCTTGCAAAT...GTATCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTATTTGCAAGCTGGGCTaGTCTCTCCAAAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFICKLG*SLQNLF
Trigger: GAAGAGATTTTGGAGAGACCAGCCCAGCTTGCAAAT...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTCTTGCATTTGCAAGCTaGGCTGGTCTCTCCAAAATC +
Preference number: 4 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCLAFAS*AGLSKI
Trigger: GATTTTGGAGAGACCAGCCCAGCTTGCAAATGCAAG...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTCGATCCTCAGCTTCTTaGTTTCAGCTGGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: FQVNYISCWDTCLCASHFRSSAS*FQLACL
Trigger: AAGACAAGCCAGCTGAAACCAAGAAGCTGAGGATCG...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCAAATTACATTTCATGCTaGGATACCTGCTTATGTGCA +
Preference number: 4 (lower is better)
Translates to: RIWAIIRWNISPVTSLTANYISC*DTCLCA
Trigger: TGCACATAAGCAGGTATCCCAGCATGAAATGTAATT...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGAATTACATTTCATGCTaGGATACCTGCTTATGTGCA +
Preference number: 4 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRNYISC*DTCLCA
Trigger: TGCACATAAGCAGGTATCCCAGCATGAAATGTAATT...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGAATACAGTAGAATCTaGGCTATTATCAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSEYSRI*AIIRWN
Trigger: ATTCCACCTGATAATAGCCCAGATTCTACTGTATTC...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGCTTAATATTGCCTTTTaGGAATACAGTAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQLNIAF*EYSRIW
Trigger: CCAGATTCTACTGTATTCCCAAAAGGCAATATTAAG...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAAAAAAGGCCTATAGTTaGTTTAATTTCACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLKKAYS*FNFTLR
Trigger: TCTCAGGGTGAAATTAAACCAACTATAGGCCTTTTT...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAAAGAAACCTTTTTGGTaGGACTTTCAAAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLKKPFW*DFQKAC
Trigger: ACATGCTTTTTGAAAGTCCCACCAAAAAGGTTTCTT...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000547825.5
3UTR CAA 72 bp TCTCTAAGCACCGAAGAGTGTAGGTTGGTTTTTCAATaGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAG +
Preference number: 4 (lower is better)
Translates to: SLSTEECRLVFQ*PQKVLCCIIPQ
Trigger: CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACACTCTTCGGTGCTTAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGAATGACTTGTTCTTGTTaGCAAGAGAAAGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GFSIASKSALLYYTSGRRMTCSC*QEKVLW
Trigger: CCAAAGAACTTTCTCTTGTCAACAAGAACAAGTCAT...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR TCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAATGACTTGTTCTTGTTaGCAAGAGAAAGTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLMTCSC*QEKVLW
Trigger: CCAAAGAACTTTCTCTTGTCAACAAGAACAAGTCAT...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR TCA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCACGGAGAATCTTAGTTTaGGTTGGTTCACCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LSTLILPFGNTVESGLLSRRILV*VGSPFS
Trigger: TGAGAAAGGTGAACCAACTCAAACTAAGATTCTCCG...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCATATGTTCCTAGACTaGGTTTGTTGTTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: NYISCWDTCLCASHFDKGHMFLD*VCCCNR
Trigger: CCTATTGCAACAACAAACTCAGTCTAGGAACATATG...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATAGAGGTGCTTTGAAATaGAGCTGCTACAGTGAATGG +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHRGALK*SCYSEW
Trigger: CCATTCACTGTAGCAGCTTCATTTCAAAGCACCTCT...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTCAGTTTTTGGGCTCTTaGCAGAGGTGCTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCQFLGS*QRCFEM
Trigger: CATTTCAAAGCACCTCTGTCAAGAGCCCAAAAACTG...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATCAGTTTTTGGGCTCTTaGCAGAGGTGCTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHQFLGS*QRCFEM
Trigger: CATTTCAAAGCACCTCTGTCAAGAGCCCAAAAACTG...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGGTGGAGATTGTTGTTTaGGGAAGCTGTTATCATCTT +
Preference number: 4 (lower is better)
Translates to: NYISCWDTCLCASHFDKGVEIVV*GSCYHL
Trigger: AAGATGATAACAGCTTCCTCAAACAACAATCTCCAC...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR TCA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCCAAAGGACACTGGGGTaGATATTACAATTAACTCAT +
Preference number: 4 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGQRTLG*ILQLTH
Trigger: ATGAGTTAATTGTAATATTCACCCCAGTGTCCTTTG...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR TCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAGTAATGCAAAGCTTGTaGGTTTTATCAGAAAAGACC +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLVMQSL*VLSEKT
Trigger: GGTCTTTTCTGATAAAACTCACAAGCTTTGCATTAC...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR GCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGTATAGTTGGTTGAGCTaGTTTGTTTGGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQYSWLS*FVWTQL
Trigger: CAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATA...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATATAGTTGGTTGAGCTaGTTTGTTTGGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: DITRKESNHLEYSKFTGRYSWLS*FVWTQL
Trigger: CAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATA...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTATAGTTGGTTGAGCTaGTTTGTTTGGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFYSWLS*FVWTQL
Trigger: CAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATA...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCCAGGCTATTCTCATTTaGAGAAATCTTTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCQAILI*RNLFPF
Trigger: GAAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTG...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTCACTTGTTTCCTTTCTaGAACTCTTCCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCHLFPF*NSSTHR
Trigger: TCTGTGGGTGGAAGAGTTGCAGAAAGGAAACAAGTG...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGAATTGCCTCAAAAAGTaGTCTGTTGTATTATACCTC +
Preference number: 4 (lower is better)
Translates to: YISCWDTCLCASHFDKGQNCLKK*SVVLYL
Trigger: GAGGTATAATACAACAGAGCACTTTTTGAGGCAATT...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGTTAAACTCTTCACTTTaGTCTAACACGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: NYISCWDTCLCASHFDKGLNSSL*SNTEDG
Trigger: CCCATCTTCCGTGTTAGAGCAAAGTGAAGAGTTTAA...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCACCATACATATATAAATaGCCGGCCTGGAAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCAPYIYK*PAWKER
Trigger: TCTCTCTTTCCAGGCCGGGCATTTATATATGTATGG...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR CCA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACCAAGAGAAAGTTCTTTaGCTGTTACCCTCAATGATA +
Preference number: 4 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNQEKVL*LLPSMI
Trigger: TATCATTGAGGGTAACAGCCAAAGAACTTTCTCTTG...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CCA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGACCCTTTCTAAAGTGCTaGGAGAGATTTTCGGTGTTA +
Preference number: 4 (lower is better)
Translates to: DITRKESNHLEYSKFTGRPFLKC*ERFSVL
Trigger: TAACACCGAAAATCTCTCCCAGCACTTTAGAAAGGG...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAAGTCTAGATCTGGGGTaGATTTGTTCTTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCASLDLG*ICSSWS
Trigger: TGACCAAGAAGAACAAATCCACCCCAGATCTAGACT...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTTTTCTACTTCATGCCTaGATTCTCCTAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSFLLHA*ILLDNF
Trigger: AAAATTGTCTAGGAGAATCCAGGCATGAAGTAGAAA...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAACTTCTTCATTGCTTTaGGAGGAGAACTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLTSSLL*EENFQK
Trigger: TTTCTGAAAGTTCTCCTCCCAAAGCAATGAAGAAGT...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTCAAGAGACGCTCCATTaGATAGACTGTCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: FQVNYISCWDTCLCASHFQETLH*IDCLLT
Trigger: TGTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTG...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGAGACTTGGGTTCTTGTaGAGATTGTTGTTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: NYISCWDTCLCASHFDKGRLGFL*RLLFEE
Trigger: TTCCTCAAACAACAATCTCCACAAGAACCCAAGTCT...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAATTACATTTCATGCTaGGATACCTGCTTATGTGCA +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLNYISC*DTCLCA
Trigger: TGCACATAAGCAGGTATCCCAGCATGAAATGTAATT...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTAGGTCTGAGCTCAAGTaGTGTAAGACAGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFRSELK*CKTVLS
Trigger: AGAAAGAACTGTCTTACACCACTTGAGCTCAGACCT...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR TCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGTGGAGATTGTTGTTTaGGGAAGCTGTTATCATCTT +
Preference number: 4 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQVEIVV*GSCYHL
Trigger: AAGATGATAACAGCTTCCTCAAACAACAATCTCCAC...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATTATAGTTGGTTGAGCTaGTTTGTTTGGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHYSWLS*FVWTQL
Trigger: CAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATA...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTTATAGTTGGTTGAGCTaGTTTGTTTGGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: FQVNYISCWDTCLCASHFYSWLS*FVWTQL
Trigger: CAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATA...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGCTGAAACTTCTTCATTaGTTTGGGAGGAGAACTTTC +
Preference number: 4 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQLKLLH*FGRRTF
Trigger: GAAAGTTCTCCTCCCAAAGCAATGAAGAAGTTTCAG...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCTTCATCGGAGTCTaGACCATTTTCTACAAGATT +
Preference number: 4 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCIFIGV*TIFYKI
Trigger: AATCTTGTAGAAAATGGTGCAGACTCCGATGAAGAT...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TTCTTTCCTTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATATCTTCATCGGAGTCTaGACCATTTTCTACAAGATT +
Preference number: 4 (lower is better)
Translates to: FFPSVKKIVLASSDLDRHIFIGV*TIFYKI
Trigger: AATCTTGTAGAAAATGGTGCAGACTCCGATGAAGAT...ATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAAGGAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR GCA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCATCATGCTGGGATACCTaGTTATGTGCATCACATTTT +
Preference number: 4 (lower is better)
Translates to: LSTLILPFGNTVESGLLSSCWDT*LCASHF
Trigger: AAAATGTGATGCACATAAGCAGGTATCCCAGCATGA...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAAATTGCCTCAAAAAGTaGTCTGTTGTATTATACCTC +
Preference number: 4 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQNCLKK*SVVLYL
Trigger: GAGGTATAATACAACAGAGCACTTTTTGAGGCAATT...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAATTGCCTCAAAAAGTaGTCTGTTGTATTATACCTC +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLNCLKK*SVVLYL
Trigger: GAGGTATAATACAACAGAGCACTTTTTGAGGCAATT...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATTAAACTCTTCACTTTaGTCTAACACGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCALNSSL*SNTEDG
Trigger: CCCATCTTCCGTGTTAGAGCAAAGTGAAGAGTTTAA...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACTTACTTTCTGTTGAGTaGTCTTTAAGATCCTCACCG +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDLLSVE*SLRSSP
Trigger: CGGTGAGGATCTTAAAGACCACTCAACAGAAAGTAA...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTATTTCTACTTCATGCCTaGATTCTCCTAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: CASHFDKGQWLANTNMNLFLLHA*ILLDNF
Trigger: AAAATTGTCTAGGAGAATCCAGGCATGAAGTAGAAA...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACTTTCTACTTCATGCCTaGATTCTCCTAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNFLLHA*ILLDNF
Trigger: AAAATTGTCTAGGAGAATCCAGGCATGAAGTAGAAA...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACGCTCATTTGTATAGTTaGTTGAGCTGCTTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: QVNYISCWDTCLCASHFDAHLYS*LSCFVW
Trigger: CCAAACAAAGCAGCTCAACCAACTATACAAATGAGC...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGAATTACATTTCATGCTaGGATACCTGCTTATGTGCA +
Preference number: 4 (lower is better)
Translates to: NYISCWDTCLCASHFDKGNYISC*DTCLCA
Trigger: TGCACATAAGCAGGTATCCCAGCATGAAATGTAATT...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCACCGAAGAGTGTAGGTTaGTTTTTCAATTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCAPKSVG*FFNCLK
Trigger: TTTGAGGCAATTGAAAAACCAACCTACACTCTTCGG...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGACCGAAGAGTGTAGGTTaGTTTTTCAATTGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: DITRKESNHLEYSKFTGRPKSVG*FFNCLK
Trigger: TTTGAGGCAATTGAAAAACCAACCTACACTCTTCGG...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATACAAAAGCTTATTTaGGAGACAGCAGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCIQKLI*ETADLS
Trigger: AGAGAGATCTGCTGTCTCCCAAATAAGCTTTTGTAT...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGGAAACTTCATTGCTTTaGGAGGAGAACTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: NYISCWDTCLCASHFDKGETSLL*EENFQK
Trigger: TTTCTGAAAGTTCTCCTCCCAAAGCAATGAAGTTTC...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000552491.5
ENST00000552909.5
CDS-3UTR TCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATCATATGTTCCTAGACTaGGTTTGTTGTTGCAATAGG +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHHMFLD*VCCCNR
Trigger: CCTATTGCAACAACAAACTCAGTCTAGGAACATATG...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAGATTTTTCTACTTCATaGCTGGATTCTCCTAGACAA +
Preference number: 4 (lower is better)
Translates to: QSYFQVNYISCWDTCLCADFSTS*LDSPRQ
Trigger: TTGTCTAGGAGAATCCAGGCATGAAGTAGAAAAATC...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATCAGGCTATTCTCATTTaGAGAAATCTTTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHQAILI*RNLFPF
Trigger: GAAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTG...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTCAGGCTATTCTCATTTaGAGAAATCTTTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCQAILI*RNLFPF
Trigger: GAAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTG...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR GCA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGATCTTCATCGGAGTCTaGACCATTTTCTACAAGATT +
Preference number: 4 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQIFIGV*TIFYKI
Trigger: AATCTTGTAGAAAATGGTGCAGACTCCGATGAAGAT...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTTCATGCTGGGATACCTaGTTATGTGCATCACATTTT +
Preference number: 4 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCSCWDT*LCASHF
Trigger: AAAATGTGATGCACATAAGCAGGTATCCCAGCATGA...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTTTACTTTCTGTTGAGTaGTCTTTAAGATCCTCACCG +
Preference number: 4 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCLLSVE*SLRSSP
Trigger: CGGTGAGGATCTTAAAGACCACTCAACAGAAAGTAA...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATTTACTTTCTGTTGAGTaGTCTTTAAGATCCTCACCG +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHLLSVE*SLRSSP
Trigger: CGGTGAGGATCTTAAAGACCACTCAACAGAAAGTAA...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGTTTCTACTTCATGCCTaGATTCTCCTAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: NYISCWDTCLCASHFDKGFLLHA*ILLDNF
Trigger: AAAATTGTCTAGGAGAATCCAGGCATGAAGTAGAAA...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGCTCATTTGTATAGTTaGTTGAGCTGCTTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: FQVNYISCWDTCLCASHFAHLYS*LSCFVW
Trigger: CCAAACAAAGCAGCTCAACCAACTATACAAATGAGC...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CCA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCAGAATACAGTAGAATCTaGGCTATTATCAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LSTLILPFGNTVESGLLSEYSRI*AIIRWN
Trigger: ATTCCACCTGATAATAGCCCAGATTCTACTGTATTC...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAAAAAGGCCTATAGTTaGTTTAATTTCACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCKKAYS*FNFTLR
Trigger: TCTCAGGGTGAAATTAAACCAACTATAGGCCTTTTT...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTAATTGCCTCAAAAAGTaGTCTGTTGTATTATACCTC +
Preference number: 4 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFNCLKK*SVVLYL
Trigger: GAGGTATAATACAACAGAGCACTTTTTGAGGCAATT...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATATGCCAGTTATAACTTaGCTGCTGAAACATTCAAAC +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHMPVIT*LLKHSN
Trigger: GTTTGAATGTTTCAGCAGGCAAGTTATAACTGGCAT...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552783.5
CDS-3UTR CCA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTCAAGAGAAAGTTCTTTaGCTGTTACCCTCAATGATA +
Preference number: 4 (lower is better)
Translates to: FQVNYISCWDTCLCASHFQEKVL*LLPSMI
Trigger: TATCATTGAGGGTAACAGCCAAAGAACTTTCTCTTG...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CCA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTACTTCTTCATTGCTTTaGGAGGAGAACTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: FQVNYISCWDTCLCASHFTSSLL*EENFQK
Trigger: TTTCTGAAAGTTCTCCTCCCAAAGCAATGAAGAAGT...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATGAATACAGTAGAATCTaGGCTATTATCAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHEYSRI*AIIRWN
Trigger: ATTCCACCTGATAATAGCCCAGATTCTACTGTATTC...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTCTTAATATTGCCTTTTaGGAATACAGTAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFLNIAF*EYSRIW
Trigger: CCAGATTCTACTGTATTCCCAAAAGGCAATATTAAG...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTATACAAAAGCTTATTTaGGAGACAGCAGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCIQKLI*ETADLS
Trigger: AGAGAGATCTGCTGTCTCCCAAATAAGCTTTTGTAT...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCAAAAAAGGCCTATAGTTaGTTTAATTTCACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LSTLILPFGNTVESGLLSKKAYS*FNFTLR
Trigger: TCTCAGGGTGAAATTAAACCAACTATAGGCCTTTTT...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATGAAACTTCATTGCTTTaGGAGGAGAACTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHETSLL*EENFQK
Trigger: TTTCTGAAAGTTCTCCTCCCAAAGCAATGAAGTTTC...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552491.5
CDS-3UTR GCA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTAATTGCCTCAAAAAGTaGTCTGTTGTATTATACCTC +
Preference number: 4 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCNCLKK*SVVLYL
Trigger: GAGGTATAATACAACAGAGCACTTTTTGAGGCAATT...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR GCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATAGTGTAAAACTGGATTaGTCATTAGAATACAGACAC +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHSVKLD*SLEYRH
Trigger: GTGTCTGTATTCTAATGAGCAATCCAGTTTTACACT...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR CCA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATTTTCTACTTCATGCCTaGATTCTCCTAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: QLSVIMRSTDITRKESNHFLLHA*ILLDNF
Trigger: AAAATTGTCTAGGAGAATCCAGGCATGAAGTAGAAA...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTCTTAATATTGCCTTTTaGGAATACAGTAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: FQVNYISCWDTCLCASHFLNIAF*EYSRIW
Trigger: CCAGATTCTACTGTATTCCCAAAAGGCAATATTAAG...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CCA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTAAAAAGGCCTATAGTTaGTTTAATTTCACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: FQVNYISCWDTCLCASHFKKAYS*FNFTLR
Trigger: TCTCAGGGTGAAATTAAACCAACTATAGGCCTTTTT...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS CCA 90 bp GCTTTGGCTCCAGAAGCAGCGTGGCTTGTCACTTCAGCAGGAGGATaGTCTGCTCTGTGCCTAATCTCAGTGCTGCTGTTCCGTAGAGAG +
Preference number: 5 (lower is better)
Translates to: ALAPEAAWLVTSAGG*SALCLISVLLFRRE
Trigger: CTCTCTACGGAACAGCAGCACTGAGATTAGGCACAGAGCAGACCATCCTCCTGCTGAAGTGACAAGCCACGCTGCTTCTGGAGCCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550611.1
ENST00000551691.5
ENST00000552720.5
ENST00000552783.5
CDS TCA 90 bp GAGGCTCTGGAATCTGGACTTAGTGGCTTGGGATGGACAGGCTGTTaGACCTCACTCTTAACCTGGGAGTCACGGGAGTCATCTTCGGCA +
Preference number: 5 (lower is better)
Translates to: EALESGLSGLGWTGC*TSLLTWESRESSSA
Trigger: TGCCGAAGATGACTCCCGTGACTCCCAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAGATTCCAGAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000547825.5
ENST00000552008.5
ENST00000552491.5
ENST00000552720.5
ENST00000552823.5
ENST00000552909.5
CDS TCA 90 bp GAGGCTCTGGAATCTGGACTTAGTGGCTTGGGATGGACAGGCTGTTaGACCTCACTCTTAACCTGGGAGTCACCTGGGGAGTCATCTTCG +
Preference number: 5 (lower is better)
Translates to: EALESGLSGLGWTGC*TSLLTWESPGESSS
Trigger: CGAAGATGACTCCCCAGGTGACTCCCAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAGATTCCAGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394943.7
ENST00000552783.5
CDS TCA 90 bp GTCCTTGATGTGGGGATATCGACCCTGAACGAGGGCTTCAGGAGGTaGCCTGAGTCTAGATCTGGGGTGGATTTGTTCTTCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: VLDVGISTLNEGFRR*PESRSGVDLFFLVS
Trigger: GCTGACCAAGAAGAACAAATCCACCCCAGATCTAGACTCAGGTCACCTCCTGAAGCCCTCGTTCAGGGTCGATATCCCCACATCAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550611.1
ENST00000552720.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGTGTGAGGGGTCTCCCTaGCATTTGCAAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSCEGSP*HLQAGL
Trigger: CAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACA...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTACCTTGGCTTCCATACTaGCAGCCAGGACACCCACCT +
Preference number: 5 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLPWLPY*QPGHPP
Trigger: AGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAGG...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGAGATCCTCACCGTCCTaGATGTGGGGATATCGACCC +
Preference number: 5 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSRSSPS*MWGYRP
Trigger: GGGTCGATATCCCCACATCAAGGACGGTGAGGATCT...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGTCCACAGAGAGCTCTTaGACCACTTCTCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSSTESS*TTSPSQ
Trigger: CTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGGA...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS CCA 90 bp GAGGCAGAAGCTTCATTGCTTTGGGAGGAGAACTTTCAGAAAGACTaGAGGCTCTGGAATCTGGACTTAGTGGCTTGGGATGGACAGGCT +
Preference number: 5 (lower is better)
Translates to: EAEASLLWEENFQKD*RLWNLDLVAWDGQA
Trigger: AGCCTGTCCATCCCAAGCCACTAAGTCCAGATTCCAGAGCCTCCAGTCTTTCTGAAAGTTCTCCTCCCAAAGCAATGAAGCTTCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp AGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCAGGAAGATCCTCACCGTCCTaGATGTGGGGATATCGACCC +
Preference number: 5 (lower is better)
Translates to: RSRSTSSGTSGLLISSSGRSSPS*MWGYRP
Trigger: GGGTCGATATCCCCACATCAAGGACGGTGAGGATCT...TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp GGCCATTTGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCACTTCCTGAACTTAGATCTTCCTTCCACTaGCACTTCGGCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: GHLGFDILIPSSKALPELRSSFH*HFGFGP
Trigger: GGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATCT...AAGTTCAGGAAGTGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCCCACGCAGGTCTCTCTaGCAGGTGCCTGAAACTTCT +
Preference number: 5 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLPRRSL*QVPETS
Trigger: AGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTGG...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTTGTGAGGGGTCTCCCTaGCATTTGCAAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: DKGQWLANTNMNLRPSIICEGSP*HLQAGL
Trigger: CAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACA...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCCCTTGGCTTCCATACTaGCAGCCAGGACACCCACCT +
Preference number: 5 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSPWLPY*QPGHPP
Trigger: AGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAGG...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTCCTTGGCTTCCATACTaGCAGCCAGGACACCCACCT +
Preference number: 5 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIPWLPY*QPGHPP
Trigger: AGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAGG...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCTCCACAGAGAGCTCTTaGACCACTTCTCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLSTESS*TTSPSQ
Trigger: CTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGGA...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS CCA 90 bp GCTTCATTGCTTTGGGAGGAGAACTTTCAGAAAGACTGGAGGCTCTaGAATCTGGACTTAGTGGCTTGGGATGGACAGGCTGTTGAACCT +
Preference number: 5 (lower is better)
Translates to: ASLLWEENFQKDWRL*NLDLVAWDGQAVEP
Trigger: AGGTTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAGATTCCAGAGCCTCCAGTCTTTCTGAAAGTTCTCCTCCCAAAGCAATGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS CCA 90 bp GCAGAAATTAGGTACCAGGAGCAGGAGGCAGAAGCTTCATTGCTTTaGGAGGAGAACTTTCAGAAAGACTGGAGGCTCTGGAATCTGGAC +
Preference number: 5 (lower is better)
Translates to: AEIRYQEQEAEASLL*EENFQKDWRLWNLD
Trigger: GTCCAGATTCCAGAGCCTCCAGTCTTTCTGAAAGTTCTCCTCCCAAAGCAATGAAGCTTCTGCCTCCTGCTCCTGGTACCTAATTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS CCA 90 bp GTGCCTGAAACTTCATTGCTTTGGGAGGAGAACTTTCAGAAAGACTaGAGGCTCTGGAATCTGGACTTAGTGGCTTGGGATGGACAGGCT +
Preference number: 5 (lower is better)
Translates to: VPETSLLWEENFQKD*RLWNLDLVAWDGQA
Trigger: AGCCTGTCCATCCCAAGCCACTAAGTCCAGATTCCAGAGCCTCCAGTCTTTCTGAAAGTTCTCCTCCCAAAGCAATGAAGTTTCAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552491.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCCAGAAGCAGCGTGGCTaGTCACTTCAGCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSQKQRG*SLQQED
Trigger: ATCCTCCTGCTGAAGTGACAAGCCACGCTGCTTCTG...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTAGATCTTCCTTCCACTaGCACTTCGGCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIRSSFH*HFGFGP
Trigger: GGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATCT...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGTTGAGCTGCTTTGTTaGGACACAGCTGCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLVELLC*DTAAWY
Trigger: GTACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAAC...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACAGTTGAGCTGCTTTGTTaGGACACAGCTGCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTVELLC*DTAAWY
Trigger: GTACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAAC...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTTGTGAGGGGTCTCCCTaGCATTTGCAAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFCEGSP*HLQAGL
Trigger: CAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACA...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGTGTGAGGGGTCTCCCTaGCATTTGCAAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQCEGSP*HLQAGL
Trigger: CAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACA...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTATGTGAGGGGTCTCCCTaGCATTTGCAAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLCEGSP*HLQAGL
Trigger: CAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACA...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTTCCACAGAGAGCTCTTaGACCACTTCTCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: DKGQWLANTNMNLRPSIISTESS*TTSPSQ
Trigger: CTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGGA...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCTCCACAGAGAGCTCTTaGACCACTTCTCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSSTESS*TTSPSQ
Trigger: CTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGGA...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS CCA 90 bp TCTTCATTGCTTTGGGAGGAGAACTTTCAGAAAGACTGGAGGCTCTaGAATCTGGACTTAGTGGCTTGGGATGGACAGGCTGTTGAACCT +
Preference number: 5 (lower is better)
Translates to: SSLLWEENFQKDWRL*NLDLVAWDGQAVEP
Trigger: AGGTTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAGATTCCAGAGCCTCCAGTCTTTCTGAAAGTTCTCCTCCCAAAGCAATGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS CCA 90 bp ACTTCATTGCTTTGGGAGGAGAACTTTCAGAAAGACTGGAGGCTCTaGAATCTGGACTTAGTGGCTTGGGATGGACAGGCTGTTGAACCT +
Preference number: 5 (lower is better)
Translates to: TSLLWEENFQKDWRL*NLDLVAWDGQAVEP
Trigger: AGGTTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAGATTCCAGAGCCTCCAGTCTTTCTGAAAGTTCTCCTCCCAAAGCAATGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552491.5
ENST00000552909.5
CDS CCA 90 bp CCAGATCTAAGAAAGAATGCTTACGGGAGTCATCTTCGGCAGGGGTaGAACGGACTGCCAGGCTATTCTCATTTGCAGAAATCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: PDLRKNAYGSHLRQG*NGLPGYSHLQKSFP
Trigger: GGGAAAAGATTTCTGCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATGACTCCCGTAAGCATTCTTTCTTAGATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552045.1
CDS-3UTR CAA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTACAGAAGCAGCGTGGCTaGTCACTTCAGCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLQKQRG*SLQQED
Trigger: ATCCTCCTGCTGAAGTGACAAGCCACGCTGCTTCTG...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTCAGAAGCAGCGTGGCTaGTCACTTCAGCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFQKQRG*SLQQED
Trigger: ATCCTCCTGCTGAAGTGACAAGCCACGCTGCTTCTG...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGAGATCCTCACCGTCCTaGATGTGGGGATATCGACCC +
Preference number: 5 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQRSSPS*MWGYRP
Trigger: GGGTCGATATCCCCACATCAAGGACGGTGAGGATCT...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGAGATCTTCCTTCCACTaGCACTTCGGCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWRSSFH*HFGFGP
Trigger: GGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATCT...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAAGATCTTCCTTCCACTaGCACTTCGGCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLRSSFH*HFGFGP
Trigger: GGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATCT...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGCCACGCAGGTCTCTCTaGCAGGTGCCTGAAACTTCT +
Preference number: 5 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQPRRSL*QVPETS
Trigger: AGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTGG...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCCCAAGAGACGCTCCATaGGATAGACTGTCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLPRDAP*DRLSSD
Trigger: GTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTGG...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCCTTGCCCATAGATCCTaGTGTGGTCTGTGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSLAHRS*CGLCPK
Trigger: CTTTGGGCACAGACCACACAAGGATCTATGGGCAAG...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GAATTCTTCAGCAAAGGTGTTGTCTACAAAACTCGACCAATTCAGAGACTTGGGTGTGAGGGGTCTCCCTaGCATTTGCAAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: EFFSKGVVYKTRPIQRLGCEGSP*HLQAGL
Trigger: CAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACA...CCCAAGTCTCTGAATTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGTGAGGGGTCTCCCTaGCATTTGCAAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: YISCWDTCLCASHFDKGQCEGSP*HLQAGL
Trigger: CAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACA...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGCCTTGGCTTCCATACTaGCAGCCAGGACACCCACCT +
Preference number: 5 (lower is better)
Translates to: YISCWDTCLCASHFDKGQPWLPY*QPGHPP
Trigger: AGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAGG...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTTCCACAGAGAGCTCTTaGACCACTTCTCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFSTESS*TTSPSQ
Trigger: CTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGGA...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGTATGTGCATCACATTTaGACAAAGGGCAGTGGCTCG +
Preference number: 5 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSYVHHI*TKGSGS
Trigger: CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATA...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS TCA 90 bp AAAAGAGAACAGCTAGGGGACCAGGGCTCAGATACAAGGGTCTGGTaGCATTTCCTAATTCCAGTACTCAGTGACCATCTGCTGGATGAT +
Preference number: 5 (lower is better)
Translates to: KREQLGDQGSDTRVW*HFLIPVLSDHLLDD
Trigger: ATCATCCAGCAGATGGTCACTGAGTACTGGAATTAGGAAATGTCACCAGACCCTTGTATCTGAGCCCTGGTCCCCTAGCTGTTCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551486.1
CDS-3UTR CAA 90 bp CGGAGTCTGCACCATTTTCTACAAGATTCTCATTCTCCATCTCCAAACTATGACCAGAAGCAGCGTGGCTaGTCACTTCAGCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: RSLHHFLQDSHSPSPNYDQKQRG*SLQQED
Trigger: ATCCTCCTGCTGAAGTGACAAGCCACGCTGCTTCTG...GTCATAGTTTGGAGATGGAGAATGAGAATCTTGTAGAAAATGGTGCAGACTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCAGAAGCAGCGTGGCTaGTCACTTCAGCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSQKQRG*SLQQED
Trigger: ATCCTCCTGCTGAAGTGACAAGCCACGCTGCTTCTG...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTAGATCCTCACCGTCCTaGATGTGGGGATATCGACCC +
Preference number: 5 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSRSSPS*MWGYRP
Trigger: GGGTCGATATCCCCACATCAAGGACGGTGAGGATCT...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGAGATCCTCACCGTCCTaGATGTGGGGATATCGACCC +
Preference number: 5 (lower is better)
Translates to: YISCWDTCLCASHFDKGQRSSPS*MWGYRP
Trigger: GGGTCGATATCCCCACATCAAGGACGGTGAGGATCT...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGGGGATGGACAGGCTGTaGAACCTCACTCTTAACCTG +
Preference number: 5 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWGMDRL*NLTLNL
Trigger: CAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCCC...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTTGCCCATAGATCCTaGTGTGGTCTGTGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWLAHRS*CGLCPK
Trigger: CTTTGGGCACAGACCACACAAGGATCTATGGGCAAG...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACGGGTCTCCCTTGCATTaGCAAGCTGGGCTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNGSPLH*QAGLVS
Trigger: AGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCC...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCGGGTCTCCCTTGCATTaGCAAGCTGGGCTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGGSPLH*QAGLVS
Trigger: AGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCC...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAGGGTCTCCCTTGCATTaGCAAGCTGGGCTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: CASHFDKGQWLANTNMNLGSPLH*QAGLVS
Trigger: AGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCC...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACATTGGGCTTTGACATTTaGATCCCTTCCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTLGFDI*IPSSKA
Trigger: TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAA...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCTTGGGCTTTGACATTTaGATCCCTTCCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLLGFDI*IPSSKA
Trigger: TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAA...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGGGGTTCTTGTGGAGATaGTTGTTTGAGGAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSGFLWR*LFEEAV
Trigger: AACAGCTTCCTCAAACAACAATCTCCACAAGAACCC...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTTCCACAGAGAGCTCTTaGACCACTTCTCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSSTESS*TTSPSQ
Trigger: CTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGGA...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATCCTCAGGATCCACAGAGAGCTCTTaGACCACTTCTCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: FSEEDRLSFFRSRSTSSGSTESS*TTSPSQ
Trigger: CTGGGAGGGAGAAGTGGTCAAAGAGCTCTCTGTGGA...TCCTGAGGATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCCACGCAGGTCTCTCTaGCAGGTGCCTGAAACTTCA +
Preference number: 5 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSPRRSL*QVPETS
Trigger: TGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTGG...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552491.5
ENST00000552909.5
CDS CCA 90 bp GGCTTTCAGCTCATTCATACATATATAAATGCCCGGCTGTATAGTTaGTTGAGCTGCTTTGTTTGGACACAGCTGCCTGGTACTTGGCCA +
Preference number: 5 (lower is better)
Translates to: GFQLIHTYINARLYS*LSCFVWTQLPGTWP
Trigger: TGGCCAAGTACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATACAGCCGGGCATTTATATATGTATGAATGAGCTGAAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552008.5
CDS-3UTR CAA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACAAGATCTGGGGTGGATTaGTTCTTCTTGGTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTRSGVD*FFLVSF
Trigger: AAAGCTGACCAAGAAGAACAAATCCACCCCAGATCT...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACCGGAGAATCTTAGTTaGAGTTGGTTCACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTPENLS*SWFTFL
Trigger: GAGAAAGGTGAACCAACTCAAACTAAGATTCTCCGG...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGATCTTCCTTCCACTaGCACTTCGGCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: CASHFDKGQWLANTNMNLRSSFH*HFGFGP
Trigger: GGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATCT...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACAGATCTTCCTTCCACTaGCACTTCGGCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNRSSFH*HFGFGP
Trigger: GGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATCT...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCAGTTGAGCTGCTTTGTTaGGACACAGCTGCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: RIWAIIRWNISPVTSLTAVELLC*DTAAWY
Trigger: GTACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAAC...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACATGGCTTTCAGCTCATTaGTATAGTTGGTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTWLSAH*YSWLSC
Trigger: GCAGCTCAACCAACTATACAAATGAGCTGAAAGCCA...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGGATGGACAGGCTGTaGAACCTCACTCTTAACCTG +
Preference number: 5 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSGMDRL*NLTLNL
Trigger: CAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCCC...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGACCACGCAGGTCTCTCTaGCAGGTGCCTGAAACTTCT +
Preference number: 5 (lower is better)
Translates to: GFSIASKSALLYYTSGRRPRRSL*QVPETS
Trigger: AGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTGG...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAACCACGCAGGTCTCTCTaGCAGGTGCCTGAAACTTCT +
Preference number: 5 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQPRRSL*QVPETS
Trigger: AGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTGG...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTACCAAGAGACGCTCCATaGGATAGACTGTCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLPRDAP*DRLSSD
Trigger: GTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTGG...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCACTTGCCCATAGATCCTaGTGTGGTCTGTGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: RIWAIIRWNISPVTSLTALAHRS*CGLCPK
Trigger: CTTTGGGCACAGACCACACAAGGATCTATGGGCAAG...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CGGAGTCTGCACCATTTTCTACAAGATTCTCATTCTCCATCTCCAAACTATGACCTTGCCCATAGATCCTaGTGTGGTCTGTGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: RSLHHFLQDSHSPSPNYDLAHRS*CGLCPK
Trigger: CTTTGGGCACAGACCACACAAGGATCTATGGGCAAG...GTCATAGTTTGGAGATGGAGAATGAGAATCTTGTAGAAAATGGTGCAGACTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTACGTTTTCATTTTTGCTaGCCCATAGATCCTTGTGTG +
Preference number: 5 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLRFHFC*PIDPCV
Trigger: CACACAAGGATCTATGGGCAAGCAAAAATGAAAACG...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TGTTTTTCCCACATTCCCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTGGGTCTCCCTTGCATTaGCAAGCTGGGCTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: CFSHIPILLRSLGIFHLFGSPLH*QAGLVS
Trigger: AGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCC...AAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGGGAATGTGGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp TGTTTTTCCCACATTCCCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTCCTTGGCTTCCATACTaGCAGCCAGGACACCCACCT +
Preference number: 5 (lower is better)
Translates to: CFSHIPILLRSLGIFHLFPWLPY*QPGHPP
Trigger: AGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAGG...AAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGGGAATGTGGGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACATCTTCAGGAGGCCATTaGGGCTTTGACATTTTGATC +
Preference number: 5 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTSSGGH*GFDILI
Trigger: GATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGA...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GGCCATTTGGGCTTTGACATTTTGATCCCTTCCTCCAAGGCACTTCCTGAACTTTCTTCAGGAGGCCATTaGGGCTTTGACATTTTGATC +
Preference number: 5 (lower is better)
Translates to: GHLGFDILIPSSKALPELSSGGH*GFDILI
Trigger: GATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGA...AAGTTCAGGAAGTGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAAATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp CATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGTCTTCAGCAAAGGTGTaGTCTACAAAACTCGACCAA +
Preference number: 5 (lower is better)
Translates to: HAGIPAYVHHILTKGSGSSSAKV*STKLDQ
Trigger: TTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGA...CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCTATGTGCATCACATTTaGACAAAGGGCAGTGGCTCG +
Preference number: 5 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSYVHHI*TKGSGS
Trigger: CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATA...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CGTTTTCATTTTTGCTTGCCCATAGATCCTTGTGTGGTCTGTGCCCAAAGCCTTGAGGCAGAAGCTTCATaGCTTTGGGAGGAGAACTTT +
Preference number: 5 (lower is better)
Translates to: RFHFCLPIDPCVVCAQSLEAEAS*LWEENF
Trigger: AAAGTTCTCCTCCCAAAGCAATGAAGCTTCTGCCTC...AAGGCTTTGGGCACAGACCACACAAGGATCTATGGGCAAGCAAAAATGAAAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS TCA 90 bp CATCAACACAGGCACACAGAACACCCCAAGCATACAACATTCTTGTaGTTCACTCTTCTAGCAGCAGAGCTTGTGGTAATGCAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: HQHRHTEHPKHTTFL*FTLLAAELVVMQSL
Trigger: CAAGCTTTGCATTACCACAAGCTCTGCTGCTAGAAGAGTGAATCACAAGAATGTTGTATGCTTGGGGTGTTCTGTGTGCCTGTGTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR CAA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACGTTGAGCTGCTTTGTTaGGACACAGCTGCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNVELLC*DTAAWY
Trigger: GTACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAAC...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCGGGATGGACAGGCTGTaGAACCTCACTCTTAACCTG +
Preference number: 5 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGGMDRL*NLTLNL
Trigger: CAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCCC...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GAATTCTTCAGCAAAGGTGTTGTCTACAAAACTCGACCAATTCAGAGACTTGGGCCAAGAGACGCTCCATaGGATAGACTGTCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: EFFSKGVVYKTRPIQRLGPRDAP*DRLSSD
Trigger: GTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTGG...CCCAAGTCTCTGAATTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCCAAGAGACGCTCCATaGGATAGACTGTCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSPRDAP*DRLSSD
Trigger: GTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTGG...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTACTTGCCCATAGATCCTaGTGTGGTCTGTGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: CASHFDKGQWLANTNMNLLAHRS*CGLCPK
Trigger: CTTTGGGCACAGACCACACAAGGATCTATGGGCAAG...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACCTTGCCCATAGATCCTaGTGTGGTCTGTGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNLAHRS*CGLCPK
Trigger: CTTTGGGCACAGACCACACAAGGATCTATGGGCAAG...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAGGGTCTCCCTTGCATTaGCAAGCTGGGCTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: QSYFQVNYISCWDTCLCAGSPLH*QAGLVS
Trigger: AGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCC...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGAGGGTCTCCCTTGCATTaGCAAGCTGGGCTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: DITRKESNHLEYSKFTGRGSPLH*QAGLVS
Trigger: AGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCC...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACTGTGAGGGGTCTCCCTaGCATTTGCAAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: QVNYISCWDTCLCASHFDCEGSP*HLQAGL
Trigger: CAGCCCAGCTTGCAAATGCAAGGGAGACCCCTCACA...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTCCTTGGCTTCCATACTaGCAGCCAGGACACCCACCT +
Preference number: 5 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFPWLPY*QPGHPP
Trigger: AGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAGG...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCACCTTGGCTTCCATACTaGCAGCCAGGACACCCACCT +
Preference number: 5 (lower is better)
Translates to: LSTLILPFGNTVESGLLSPWLPY*QPGHPP
Trigger: AGGTGGGTGTCCTGGCTGCAAGTATGGAAGCCAAGG...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTTCTTCAGGAGGCCATTaGGGCTTTGACATTTTGATC +
Preference number: 5 (lower is better)
Translates to: DKGQWLANTNMNLRPSIISSGGH*GFDILI
Trigger: GATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGA...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GAATTCTTCAGCAAAGGTGTTGTCTACAAAACTCGACCAATTCAGAGACTTGGGTCAGGAACTTCGGGCTaGCTGATTTCGTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: EFFSKGVVYKTRPIQRLGSGTSG*LISSSG
Trigger: TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGA...CCCAAGTCTCTGAATTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCTCTTCAGCAAAGGTGTaGTCTACAAAACTCGACCAA +
Preference number: 5 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLSSAKV*STKLDQ
Trigger: TTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGA...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACATCTTCAGCAAAGGTGTaGTCTACAAAACTCGACCAA +
Preference number: 5 (lower is better)
Translates to: GIPAYVHHILTKGSGSLTSSAKV*STKLDQ
Trigger: TTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGA...TGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTTATGTGCATCACATTTaGACAAAGGGCAGTGGCTCG +
Preference number: 5 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFYVHHI*TKGSGS
Trigger: CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATA...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCACCGAAGAGTGTAGGTaGGTTTTTCAATTGCCTCAA +
Preference number: 5 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLTEECR*VFQLPQ
Trigger: TTGAGGCAATTGAAAAACCAACCTACACTCTTCGGT...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCGTGCCTGAAACTTCATaGCTTTGGGAGGAGAACTTT +
Preference number: 5 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSVPETS*LWEENF
Trigger: AAAGTTCTCCTCCCAAAGCAATGAAGTTTCAGGCAC...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000552491.5
ENST00000552909.5
CDS GCA 90 bp ACCAGGACTAAGAAAGCAAAGTCAGGATTAGACCATGGTAAGAACTaGAAATCCAGCGAGGGTAGGGTTCATGTGAAAAGAGAACAGCTA +
Preference number: 5 (lower is better)
Translates to: TRTKKAKSGLDHGKN*KSSEGRVHVKREQL
Trigger: TAGCTGTTCTCTTTTCACATGAACCCTACCCTCGCTGGATTTGCAGTTCTTACCATGGTCTAATCCTGACTTTGCTTTCTTAGTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551486.1
CDS-3UTR CAA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGATCTGGGGTGGATTaGTTCTTCTTGGTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPRSGVD*FFLVSF
Trigger: AAAGCTGACCAAGAAGAACAAATCCACCCCAGATCT...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAAGATCCTCACCGTCCTaGATGTGGGGATATCGACCC +
Preference number: 5 (lower is better)
Translates to: QSYFQVNYISCWDTCLCARSSPS*MWGYRP
Trigger: GGGTCGATATCCCCACATCAAGGACGGTGAGGATCT...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTACCGGAGAATCTTAGTTaGAGTTGGTTCACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLPENLS*SWFTFL
Trigger: GAGAAAGGTGAACCAACTCAAACTAAGATTCTCCGG...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGCCGGAGAATCTTAGTTaGAGTTGGTTCACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQPENLS*SWFTFL
Trigger: GAGAAAGGTGAACCAACTCAAACTAAGATTCTCCGG...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CATCCTCATCATAATACCGATTTCTCTTTATCTGTTCTTCCACAGAGAGCTCTTGTTGAGCTGCTTTGTTaGGACACAGCTGCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: HPHHNTDFSLSVLPQRALVELLC*DTAAWY
Trigger: GTACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAAC...AAGAGCTCTCTGTGGAAGAACAGATAAAGAGAAATCGGTATTATGATGAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCCATTTGTATAGTTGGTaGAGCTGCTTTGTTTGGACA +
Preference number: 5 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLHLYSW*SCFVWT
Trigger: TGTCCAAACAAAGCAGCTCAACCAACTATACAAATG...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTTGGCTTTCAGCTCATTaGTATAGTTGGTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFWLSAH*YSWLSC
Trigger: GCAGCTCAACCAACTATACAAATGAGCTGAAAGCCA...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGTGGCTTTCAGCTCATTaGTATAGTTGGTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWWLSAH*YSWLSC
Trigger: GCAGCTCAACCAACTATACAAATGAGCTGAAAGCCA...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTCCAGGCTATTCTCATTaGCAGAAATCTTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIPGYSH*QKSFPL
Trigger: AAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTGG...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCGGGATGGACAGGCTGTaGAACCTCACTCTTAACCTG +
Preference number: 5 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCGMDRL*NLTLNL
Trigger: CAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCCC...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GCTAACACTAACATGAATTTAAGGCCCAGCATCATTGCAATTTGTCACTCTTCAGGGATGGACAGGCTGTaGAACCTCACTCTTAACCTG +
Preference number: 5 (lower is better)
Translates to: ANTNMNLRPSIIAICHSSGMDRL*NLTLNL
Trigger: CAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCCC...TGAAGAGTGACAAATTGCAATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp ATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATACCCACGCAGGTCTCTCTaGCAGGTGCCTGAAACTTCT +
Preference number: 5 (lower is better)
Translates to: ITRKESNHLEYSKFTGRYPRRSL*QVPETS
Trigger: AGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTGG...GTATCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCCCAAGAGACGCTCCATaGGATAGACTGTCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGPRDAP*DRLSSD
Trigger: GTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTGG...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCTTGCCCATAGATCCTaGTGTGGTCTGTGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: NYISCWDTCLCASHFDKGLAHRS*CGLCPK
Trigger: CTTTGGGCACAGACCACACAAGGATCTATGGGCAAG...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCTCTTCGTTTTCATTTTaGCTTGCCCATAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLSSFSF*LAHRSL
Trigger: CAAGGATCTATGGGCAAGCAAAAATGAAAACGAAGA...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATGGGTCTCCCTTGCATTaGCAAGCTGGGCTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: QLSVIMRSTDITRKESNHGSPLH*QAGLVS
Trigger: AGAGACCAGCCCAGCTTGCAAATGCAAGGGAGACCC...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CACATCCTGGGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCTTGGGCTTTGACATTTaGATCCCTTCCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: HILGFLILSSEFFSKGVVLGFDI*IPSSKA
Trigger: TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAA...GACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCCCAGGATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTATCTTCAGGAGGCCATTaGGGCTTTGACATTTTGATC +
Preference number: 5 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLSSGGH*GFDILI
Trigger: GATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGA...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGATCAGGAACTTCGGGCTaGCTGATTTCGTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: GFSIASKSALLYYTSGRRSGTSG*LISSSG
Trigger: TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGA...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGGGGTTCTTGTGGAGATaGTTGTTTGAGGAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWGFLWR*LFEEAV
Trigger: AACAGCTTCCTCAAACAACAATCTCCACAAGAACCC...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAGGGTTCTTGTGGAGATaGTTGTTTGAGGAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLGFLWR*LFEEAV
Trigger: AACAGCTTCCTCAAACAACAATCTCCACAAGAACCC...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TTCAGATCTAGATCGACATCCTCAGGAACTTCGGGCTTGCTGATTTCGTCTTCATCTTCAGCAAAGGTGTaGTCTACAAAACTCGACCAA +
Preference number: 5 (lower is better)
Translates to: FRSRSTSSGTSGLLISSSSSAKV*STKLDQ
Trigger: TTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGA...TGAAGACGAAATCAGCAAGCCCGAAGTTCCTGAGGATGTCGATCTAGATCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTATGTGCATCACATTTaGACAAAGGGCAGTGGCTCG +
Preference number: 5 (lower is better)
Translates to: YISCWDTCLCASHFDKGQYVHHI*TKGSGS
Trigger: CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATA...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTACTGTCTACCTTAATATaGCCTTTTGGGAATACAGTA +
Preference number: 5 (lower is better)
Translates to: AGIPAYVHHILTKGSGSLLSTLI*PFGNTV
Trigger: TACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG...TAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCACCACGCAGGTCTCTCTaGCAGGTGCCTGAAACTTCA +
Preference number: 5 (lower is better)
Translates to: QSYFQVNYISCWDTCLCAPRRSL*QVPETS
Trigger: TGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTGG...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552491.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGATGCCAGTTATAACTaGCCTGCTGAAACATTCAAA +
Preference number: 5 (lower is better)
Translates to: SCWDTCLCASHFDKGQWLDASYN*PAETFK
Trigger: TTTGAATGTTTCAGCAGGCAAGTTATAACTGGCATC...GAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552783.5
CDS CCA 90 bp CATGTTGTTCTTTGTAAAATGAAAGTTAAAACTCCAAGCTGCTCCTaGTCCACTGCTGTTTCAGACAGCTGTGAACAGTTACAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: HVVLCKMKVKTPSCS*STAVSDSCEQLQPC
Trigger: GCAAGGCTGTAACTGTTCACAGCTGTCTGAAACAGCAGTGGACCAGGAGCAGCTTGGAGTTTTAACTTTCATTTTACAAAGAACAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552783.5
CDS-3UTR CAA 90 bp TTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATCCTCAGGAAGATCTGGGGTGGATTaGTTCTTCTTGGTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: FSEEDRLSFFRSRSTSSGRSGVD*FFLVSF
Trigger: AAAGCTGACCAAGAAGAACAAATCCACCCCAGATCT...TCCTGAGGATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGAGATCTGGGGTGGATTaGTTCTTCTTGGTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRRSGVD*FFLVSF
Trigger: AAAGCTGACCAAGAAGAACAAATCCACCCCAGATCT...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CACATCCTGGGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCCCGGAGAATCTTAGTTaGAGTTGGTTCACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: HILGFLILSSEFFSKGVVPENLS*SWFTFL
Trigger: GAGAAAGGTGAACCAACTCAAACTAAGATTCTCCGG...GACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCCCAGGATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGCCGGAGAATCTTAGTTaGAGTTGGTTCACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: YISCWDTCLCASHFDKGQPENLS*SWFTFL
Trigger: GAGAAAGGTGAACCAACTCAAACTAAGATTCTCCGG...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCAGTTGAGCTGCTTTGTTaGGACACAGCTGCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: LSTLILPFGNTVESGLLSVELLC*DTAAWY
Trigger: GTACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAAC...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp GACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCATCATTCATTTGTATAGTTGGTaGAGCTGCTTTGTTTGGACA +
Preference number: 5 (lower is better)
Translates to: DKGQWLANTNMNLRPSIIHLYSW*SCFVWT
Trigger: TGTCCAAACAAAGCAGCTCAACCAACTATACAAATG...AATGATGCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGTGGCTTTCAGCTCATTaGTATAGTTGGTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRWLSAH*YSWLSC
Trigger: GCAGCTCAACCAACTATACAAATGAGCTGAAAGCCA...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGCCAGGCTATTCTCATTaGCAGAAATCTTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQPGYSH*QKSFPL
Trigger: AAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTGG...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCCCAGGCTATTCTCATTaGCAGAAATCTTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPPGYSH*QKSFPL
Trigger: AAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTGG...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGGGATGGACAGGCTGTaGAACCTCACTCTTAACCTG +
Preference number: 5 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQGMDRL*NLTLNL
Trigger: CAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCCC...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCCCAAGAGACGCTCCATaGGATAGACTGTCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCPRDAP*DRLSSD
Trigger: GTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTGG...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCTCTTCGTTTTCATTTTaGCTTGCCCATAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSSSFSF*LAHRSL
Trigger: CAAGGATCTATGGGCAAGCAAAAATGAAAACGAAGA...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGATTGGGCTTTGACATTTaGATCCCTTCCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: GFSIASKSALLYYTSGRRLGFDI*IPSSKA
Trigger: TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAA...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCTTCAGGAGGCCATTaGGGCTTTGACATTTTGATC +
Preference number: 5 (lower is better)
Translates to: YISCWDTCLCASHFDKGQSSGGH*GFDILI
Trigger: GATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGA...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGTCAGGAACTTCGGGCTaGCTGATTTCGTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: NYISCWDTCLCASHFDKGSGTSG*LISSSG
Trigger: TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGA...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGGGGTTCTTGTGGAGATaGTTGTTTGAGGAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: YISCWDTCLCASHFDKGQGFLWR*LFEEAV
Trigger: AACAGCTTCCTCAAACAACAATCTCCACAAGAACCC...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGTCTTCAGCAAAGGTGTaGTCTACAAAACTCGACCAA +
Preference number: 5 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQSSAKV*STKLDQ
Trigger: TTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGA...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTACAAGAGAAAGTTCTTaGGCTGTTACCCTCAATGAT +
Preference number: 5 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFTRESS*AVTLND
Trigger: ATCATTGAGGGTAACAGCCAAAGAACTTTCTCTTGT...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CAA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGGCCGATGACTTGTTCTaGTTGACAAGAGAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRADDLF*LTRESS
Trigger: AGAACTTTCTCTTGTCAACAAGAACAAGTCATCGGC...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CAA 90 bp CCCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTCCTTTCTGCAACTCTGCCGATGACTTGTTCTaGTTGACAAGAGAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: PILLRSLGIFHLFPFCNSADDLF*LTRESS
Trigger: AGAACTTTCTCTTGTCAACAAGAACAAGTCATCGGC...AGAGTTGCAGAAAGGAAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGATCTGGGGTGGATTaGTTCTTCTTGGTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGRSGVD*FFLVSF
Trigger: AAAGCTGACCAAGAAGAACAAATCCACCCCAGATCT...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp ATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCATTTGTATAGTTGGTaGAGCTGCTTTGTTTGGACA +
Preference number: 5 (lower is better)
Translates to: ISCWDTCLCASHFDKGQWHLYSW*SCFVWT
Trigger: TGTCCAAACAAAGCAGCTCAACCAACTATACAAATG...CCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GAATTCTTCAGCAAAGGTGTTGTCTACAAAACTCGACCAATTCAGAGACTTGGGCCAGGCTATTCTCATTaGCAGAAATCTTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: EFFSKGVVYKTRPIQRLGPGYSH*QKSFPL
Trigger: AAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTGG...CCCAAGTCTCTGAATTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGGGATGGACAGGCTGTaGAACCTCACTCTTAACCTG +
Preference number: 5 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCGMDRL*NLTLNL
Trigger: CAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCCC...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAACTTCTTCATTGCTTaGGGAGGAGAACTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: SHFDKGQWLANTNMNLRPNFFIA*GGELSE
Trigger: TTCTGAAAGTTCTCCTCCCAAAGCAATGAAGAAGTT...GGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CATCATAAGGGAAATACAGGGTTTAGAGGTCTGAGCTCAAGTGGTGTAAGACAGAACTTCTTCATTGCTTaGGGAGGAGAACTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: HHKGNTGFRGLSSSGVRQNFFIA*GGELSE
Trigger: TTCTGAAAGTTCTCCTCCCAAAGCAATGAAGAAGTT...CTGTCTTACACCACTTGAGCTCAGACCTCTAAACCCTGTATTTCCCTTATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CACATCCTGGGATTTCTGATTCTGAGTAGTGAATTCTTCAGCAAAGGTGTTGTCCGTTTTCATTTTTGCTaGCCCATAGATCCTTGTGTG +
Preference number: 5 (lower is better)
Translates to: HILGFLILSSEFFSKGVVRFHFC*PIDPCV
Trigger: CACACAAGGATCTATGGGCAAGCAAAAATGAAAACG...GACAACACCTTTGCTGAAGAATTCACTACTCAGAATCAGAAATCCCAGGATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp GCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCGTTTTCATTTTTGCTaGCCCATAGATCCTTGTGTG +
Preference number: 5 (lower is better)
Translates to: ASHFDKGQWLANTNMNLRRFHFC*PIDPCV
Trigger: CACACAAGGATCTATGGGCAAGCAAAAATGAAAACG...CCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTTCTTCGTTTTCATTTTaGCTTGCCCATAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFSSFSF*LAHRSL
Trigger: CAAGGATCTATGGGCAAGCAAAAATGAAAACGAAGA...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAATCTTCAGGAGGCCATTaGGGCTTTGACATTTTGATC +
Preference number: 5 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQSSGGH*GFDILI
Trigger: GATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGA...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTCAGGAACTTCGGGCTaGCTGATTTCGTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFSGTSG*LISSSG
Trigger: TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGA...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCAGGAACTTCGGGCTaGCTGATTTCGTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: QSYFQVNYISCWDTCLCASGTSG*LISSSG
Trigger: TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGA...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCATCAGGAACTTCGGGCTaGCTGATTTCGTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LSTLILPFGNTVESGLLSSGTSG*LISSSG
Trigger: TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGA...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACGGGTTCTTGTGGAGATaGTTGTTTGAGGAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNGFLWR*LFEEAV
Trigger: AACAGCTTCCTCAAACAACAATCTCCACAAGAACCC...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCTATGTGCATCACATTTaGACAAAGGGCAGTGGCTCG +
Preference number: 5 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCYVHHI*TKGSGS
Trigger: CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATA...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp AGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAAGCCTTACAGCAACCGAAGAGTGTAGGTaGGTTTTTCAATTGCCTCAA +
Preference number: 5 (lower is better)
Translates to: RIWAIIRWNISPVTSLTATEECR*VFQLPQ
Trigger: TTGAGGCAATTGAAAAACCAACCTACACTCTTCGGT...TGCTGTAAGGCTTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAAGGCCCAGCCATAAAGAAACCTTTTaGGTGGGACTTTCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: HFDKGQWLANTNMNLRPSHKETF*VGLSKS
Trigger: GCTTTTTGAAAGTCCCACCAAAAAGGTTTCTTTATG...GCTGGGCCTTAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS-3UTR CAA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACGTGCCTGAAACTTCATaGCTTTGGGAGGAGAACTTT +
Preference number: 5 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNVPETS*LWEENF
Trigger: AAAGTTCTCCTCCCAAAGCAATGAAGTTTCAGGCAC...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552491.5
CDS TCA 90 bp TTCAGCTGCTTTCTGGTACTTGGAGAATATTTCCACAATAGCCGATaGCTTGTTCTTGTTGACAAGAGAAAGTTCTTTGGCTGTTACCCT +
Preference number: 5 (lower is better)
Translates to: FSCFLVLGEYFHNSR*LVLVDKRKFFGCYP
Trigger: AGGGTAACAGCCAAAGAACTTTCTCTTGTCAACAAGAACAAGTCATCGGCTATTGTGGAAATATTCTCCAAGTACCAGAAAGCAGCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550592.1
ENST00000551691.5
ENST00000552720.5
CDS GCA 90 bp AGAGAAAGTTCTTTGGCTGTTACCCTCAATGATAGTGAGGTCCATTaGCGTCTATTAAATGGAGATGATTCCATCTTGTCTACAGACACT +
Preference number: 5 (lower is better)
Translates to: RESSLAVTLNDSEVH*RLLNGDDSILSTDT
Trigger: AGTGTCTGTAGACAAGATGGAATCATCTCCATTTAATAGACGGCAATGGACCTCACTATCATTGAGGGTAACAGCCAAAGAACTTTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550592.1
ENST00000551691.5
ENST00000552720.5
CDS-3UTR CAA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACGCCGATGACTTGTTCTaGTTGACAAGAGAAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNADDLF*LTRESS
Trigger: AGAACTTTCTCTTGTCAACAAGAACAAGTCATCGGC...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CAA 90 bp ACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGCTGCTTTCTGGTACTaGGAGAATATTTCCACAATA +
Preference number: 5 (lower is better)
Translates to: TFHAGIPAYVHHILTKGSAAFWY*ENISTI
Trigger: TATTGTGGAAATATTCTCCAAGTACCAGAAAGCAGC...ACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CAA 90 bp GAATTCTTCAGCAAAGGTGTTGTCTACAAAACTCGACCAATTCAGAGACTTGGGGCTGCTTTCTGGTACTaGGAGAATATTTCCACAATA +
Preference number: 5 (lower is better)
Translates to: EFFSKGVVYKTRPIQRLGAAFWY*ENISTI
Trigger: TATTGTGGAAATATTCTCCAAGTACCAGAAAGCAGC...CCCAAGTCTCTGAATTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp CGGAGTCTGCACCATTTTCTACAAGATTCTCATTCTCCATCTCCAAACTATGACCATTTGTATAGTTGGTaGAGCTGCTTTGTTTGGACA +
Preference number: 5 (lower is better)
Translates to: RSLHHFLQDSHSPSPNYDHLYSW*SCFVWT
Trigger: TGTCCAAACAAAGCAGCTCAACCAACTATACAAATG...GTCATAGTTTGGAGATGGAGAATGAGAATCTTGTAGAAAATGGTGCAGACTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp TGTTTTTCCCACATTCCCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTTGGCTTTCAGCTCATTaGTATAGTTGGTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: CFSHIPILLRSLGIFHLFWLSAH*YSWLSC
Trigger: GCAGCTCAACCAACTATACAAATGAGCTGAAAGCCA...AAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGGGAATGTGGGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTACCAGGCTATTCTCATTaGCAGAAATCTTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: CASHFDKGQWLANTNMNLPGYSH*QKSFPL
Trigger: AAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTGG...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTCCAAGAGACGCTCCATaGGATAGACTGTCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCPRDAP*DRLSSD
Trigger: GTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTGG...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGACGTCGACGTTTTCATTTTTGCTaGCCCATAGATCCTTGTGTG +
Preference number: 5 (lower is better)
Translates to: GFSIASKSALLYYTSGRRRFHFC*PIDPCV
Trigger: CACACAAGGATCTATGGGCAAGCAAAAATGAAAACG...TCGACGTCCTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGTTGGGCTTTGACATTTaGATCCCTTCCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQLGFDI*IPSSKA
Trigger: TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAA...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCTCTTCAGGAGGCCATTaGGGCTTTGACATTTTGATC +
Preference number: 5 (lower is better)
Translates to: PKLLPSKLHFMLGYLLMCSSGGH*GFDILI
Trigger: GATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGA...GCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTTCAGGAACTTCGGGCTaGCTGATTTCGTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCSGTSG*LISSSG
Trigger: TCCTGAAGACGAAATCAGCAAGCCCGAAGTTCCTGA...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TTCTTTCCTTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATGGGTTCTTGTGGAGATaGTTGTTTGAGGAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: FFPSVKKIVLASSDLDRHGFLWR*LFEEAV
Trigger: AACAGCTTCCTCAAACAACAATCTCCACAAGAACCC...ATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAAGGAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCTCTTCAGCAAAGGTGTaGTCTACAAAACTCGACCAA +
Preference number: 5 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGSSAKV*STKLDQ
Trigger: TTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGA...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTATGTGCATCACATTTaGACAAAGGGCAGTGGCTCG +
Preference number: 5 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFYVHHI*TKGSGS
Trigger: CGAGCCACTGCCCTTTGTCAAAATGTGATGCACATA...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp ATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTACTGTCTACCTTAATATaGCCTTTTGGGAATACAGTA +
Preference number: 5 (lower is better)
Translates to: IPAYVHHILTKGSGSLTLLSTLI*PFGNTV
Trigger: TACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG...TAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTAACCGAAGAGTGTAGGTaGGTTTTTCAATTGCCTCAA +
Preference number: 5 (lower is better)
Translates to: CASHFDKGQWLANTNMNLTEECR*VFQLPQ
Trigger: TTGAGGCAATTGAAAAACCAACCTACACTCTTCGGT...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CACGGAAGATGGGGGACAGTGATCCCGAAGGTATTACTAAAATATTGCAGCTTTTCCCATCCATACAATTaGGAATATCAACTGTGTACA +
Preference number: 5 (lower is better)
Translates to: HGRWGTVIPKVLLKYCSFSHPYN*EYQLCT
Trigger: TGTACACAGTTGATATTCCAAATTGTATGGATGGGA...AAAGCTGCAATATTTTAGTAATACCTTCGGGATCACTGTCCCCCATCTTCCGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACGGAGATGATTCCATCTaGTCTACAGACACTGAAATA +
Preference number: 5 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNGDDSI*STDTEI
Trigger: TATTTCAGTGTCTGTAGACAAGATGGAATCATCTCC...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CAA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACACAATAGCCGATGACTaGTTCTTGTTGACAAGAGAA +
Preference number: 5 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNTIADD*FLLTRE
Trigger: TTCTCTTGTCAACAAGAACAAGTCATCGGCTATTGT...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CAA 90 bp CCATTCTTCTTAGAAGCCTTGGCATTTTCCACTTGTTTCCTTTCTGCAACTCTTACAATAGCCGATGACTaGTTCTTGTTGACAAGAGAA +
Preference number: 5 (lower is better)
Translates to: PFFLEALAFSTCFLSATLTIADD*FLLTRE
Trigger: TTCTCTTGTCAACAAGAACAAGTCATCGGCTATTGT...AAGAGTTGCAGAAAGGAAACAAGTGGAAAATGCCAAGGCTTCTAAGAAGAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAAGATCTGGGGTGGATTaGTTCTTCTTGGTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: QSYFQVNYISCWDTCLCARSGVD*FFLVSF
Trigger: AAAGCTGACCAAGAAGAACAAATCCACCCCAGATCT...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTCCGGAGAATCTTAGTTaGAGTTGGTTCACCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFPENLS*SWFTFL
Trigger: GAGAAAGGTGAACCAACTCAAACTAAGATTCTCCGG...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACTGGCTTTCAGCTCATTaGTATAGTTGGTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: QVNYISCWDTCLCASHFDWLSAH*YSWLSC
Trigger: GCAGCTCAACCAACTATACAAATGAGCTGAAAGCCA...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACAACTTCTTCATTGCTTaGGGAGGAGAACTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNNFFIA*GGELSE
Trigger: TTCTGAAAGTTCTCCTCCCAAAGCAATGAAGAAGTT...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCGTTTTCATTTTTGCTaGCCCATAGATCCTTGTGTG +
Preference number: 5 (lower is better)
Translates to: NYISCWDTCLCASHFDKGRFHFC*PIDPCV
Trigger: CACACAAGGATCTATGGGCAAGCAAAAATGAAAACG...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TTAAGACACCTCTCCCTCCCATCCATACAATTTGGAATATCAACTGTGTACAACTCTTCGTTTTCATTTTaGCTTGCCCATAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: LRHLSLPSIQFGISTVYNSSFSF*LAHRSL
Trigger: CAAGGATCTATGGGCAAGCAAAAATGAAAACGAAGA...GTTGTACACAGTTGATATTCCAAATTGTATGGATGGGAGGGAGAGGTGTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTTTGGGCTTTGACATTTaGATCCCTTCCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCLGFDI*IPSSKA
Trigger: TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAA...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTTTGGGCTTTGACATTTaGATCCCTTCCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: FQVNYISCWDTCLCASHFLGFDI*IPSSKA
Trigger: TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAA...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATTTGGGCTTTGACATTTaGATCCCTTCCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: QLSVIMRSTDITRKESNHLGFDI*IPSSKA
Trigger: TGCCTTGGAGGAAGGGATCAAAATGTCAAAGCCCAA...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGATCTTCAGGAGGCCATTaGGGCTTTGACATTTTGATC +
Preference number: 5 (lower is better)
Translates to: DITRKESNHLEYSKFTGRSSGGH*GFDILI
Trigger: GATCAAAATGTCAAAGCCCAAATGGCCTCCTGAAGA...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGAGGGTTCTTGTGGAGATaGTTGTTTGAGGAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: DITRKESNHLEYSKFTGRGFLWR*LFEEAV
Trigger: AACAGCTTCCTCAAACAACAATCTCCACAAGAACCC...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCAGGGTTCTTGTGGAGATaGTTGTTTGAGGAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: QSYFQVNYISCWDTCLCAGFLWR*LFEEAV
Trigger: AACAGCTTCCTCAAACAACAATCTCCACAAGAACCC...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCTCAAAAAGTGCTCTGTaGTATTATACCTCAGGACGT +
Preference number: 5 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGSKSAL*YYTSGR
Trigger: ACGTCCTGAGGTATAATACAACAGAGCACTTTTTGA...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCAGTCCCATCCATACAATTaGGAATATCAACTGTGTACA +
Preference number: 5 (lower is better)
Translates to: YISCWDTCLCASHFDKGQSHPYN*EYQLCT
Trigger: TGTACACAGTTGATATTCCAAATTGTATGGATGGGA...CTGCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TTCTTTCCTTCAGTGAAGAAGATCGTCTTAGCTTCTTCAGATCTAGATCGACATGGAGATGATTCCATCTaGTCTACAGACACTGAAATA +
Preference number: 5 (lower is better)
Translates to: FFPSVKKIVLASSDLDRHGDDSI*STDTEI
Trigger: TATTTCAGTGTCTGTAGACAAGATGGAATCATCTCC...ATGTCGATCTAGATCTGAAGAAGCTAAGACGATCTTCTTCACTGAAGGAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp CTGTCTACCTTAATATTGCCTTTTGGGAATACAGTAGAATCTGGGCTATTATCACCAGGCTATTCTCATTaGCAGAAATCTTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: LSTLILPFGNTVESGLLSPGYSH*QKSFPL
Trigger: AAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTGG...TGATAATAGCCCAGATTCTACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACCCAGGCTATTCTCATTaGCAGAAATCTTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: QVNYISCWDTCLCASHFDPGYSH*QKSFPL
Trigger: AAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTGG...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGACCAGGCTATTCTCATTaGCAGAAATCTTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: DITRKESNHLEYSKFTGRPGYSH*QKSFPL
Trigger: AAGGGGAAAAGATTTCTGCAAATGAGAATAGCCTGG...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTCGTTTTCATTTTTGCTaGCCCATAGATCCTTGTGTG +
Preference number: 5 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFRFHFC*PIDPCV
Trigger: CACACAAGGATCTATGGGCAAGCAAAAATGAAAACG...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CATCCTCATCATAATACCGATTTCTCTTTATCTGTTCTTCCACAGAGAGCTCTTTCTTCGTTTTCATTTTaGCTTGCCCATAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: HPHHNTDFSLSVLPQRALSSFSF*LAHRSL
Trigger: CAAGGATCTATGGGCAAGCAAAAATGAAAACGAAGA...AAGAGCTCTCTGTGGAAGAACAGATAAAGAGAAATCGGTATTATGATGAGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552720.5
CDS-3UTR CAA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACTCTTCAGCAAAGGTGTaGTCTACAAAACTCGACCAA +
Preference number: 5 (lower is better)
Translates to: QVNYISCWDTCLCASHFDSSAKV*STKLDQ
Trigger: TTGGTCGAGTTTTGTAGACAACACCTTTGCTGAAGA...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp AATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGTCAAAAAGTGCTCTGTaGTATTATACCTCAGGACGT +
Preference number: 5 (lower is better)
Translates to: NYISCWDTCLCASHFDKGSKSAL*YYTSGR
Trigger: ACGTCCTGAGGTATAATACAACAGAGCACTTTTTGA...CCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTACCGAAGAGTGTAGGTaGGTTTTTCAATTGCCTCAA +
Preference number: 5 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFTEECR*VFQLPQ
Trigger: TTGAGGCAATTGAAAAACCAACCTACACTCTTCGGT...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp GGGAATACAGTAGAATCTGGGCTATTATCAGGTGGAATATTTCCCCAGTTACAATCCCATCCATACAATTaGGAATATCAACTGTGTACA +
Preference number: 5 (lower is better)
Translates to: GNTVESGLLSGGIFPQLQSHPYN*EYQLCT
Trigger: TGTACACAGTTGATATTCCAAATTGTATGGATGGGA...TTGTAACTGGGGAAATATTCCACCTGATAATAGCCCAGATTCTACTGTATTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp ATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACAAAGGGCTCCCATCCATACAATTaGGAATATCAACTGTGTACA +
Preference number: 5 (lower is better)
Translates to: ITFHAGIPAYVHHILTKGSHPYN*EYQLCT
Trigger: TGTACACAGTTGATATTCCAAATTGTATGGATGGGA...GCCCTTTGTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TGTGCATCACATTTTGACAAAGGGCAGTGGCTCGCTAACACTAACATGAATTTATCCCATCCATACAATTaGGAATATCAACTGTGTACA +
Preference number: 5 (lower is better)
Translates to: CASHFDKGQWLANTNMNLSHPYN*EYQLCT
Trigger: TGTACACAGTTGATATTCCAAATTGTATGGATGGGA...TAAATTCATGTTAGTGTTAGCGAGCCACTGCCCTTTGTCAAAATGTGATGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGGGAGATGATTCCATCTaGTCTACAGACACTGAAATA +
Preference number: 5 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQGDDSI*STDTEI
Trigger: TATTTCAGTGTCTGTAGACAAGATGGAATCATCTCC...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CAA 90 bp GATATCACCAGAAAAGAAAGCAATCATTTGGAGTACAGTAAATTCACTGGCAGAACAAGAGAAAGTTCTTaGGCTGTTACCCTCAATGAT +
Preference number: 5 (lower is better)
Translates to: DITRKESNHLEYSKFTGRTRESS*AVTLND
Trigger: ATCATTGAGGGTAACAGCCAAAGAACTTTCTCTTGT...TCTGCCAGTGAATTTACTGTACTCCAAATGATTGCTTTCTTTTCTGGTGATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CAA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTACAATAGCCGATGACTaGTTCTTGTTGACAAGAGAA +
Preference number: 5 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFTIADD*FLLTRE
Trigger: TTCTCTTGTCAACAAGAACAAGTCATCGGCTATTGT...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341247.8
ENST00000394943.7
CDS-3UTR CAA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTCGTTTTCATTTTTGCTaGCCCATAGATCCTTGTGTG +
Preference number: 5 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCRFHFC*PIDPCV
Trigger: CACACAAGGATCTATGGGCAAGCAAAAATGAAAACG...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTCGTTTTCATTTTTGCTaGCCCATAGATCCTTGTGTG +
Preference number: 5 (lower is better)
Translates to: FQVNYISCWDTCLCASHFRFHFC*PIDPCV
Trigger: CACACAAGGATCTATGGGCAAGCAAAAATGAAAACG...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGTCTTCGTTTTCATTTTaGCTTGCCCATAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQSSFSF*LAHRSL
Trigger: CAAGGATCTATGGGCAAGCAAAAATGAAAACGAAGA...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACTCTTCGTTTTCATTTTaGCTTGCCCATAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: QVNYISCWDTCLCASHFDSSFSF*LAHRSL
Trigger: CAAGGATCTATGGGCAAGCAAAAATGAAAACGAAGA...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp CAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCAAAAAGTGCTCTGTaGTATTATACCTCAGGACGT +
Preference number: 5 (lower is better)
Translates to: QSYFQVNYISCWDTCLCASKSAL*YYTSGR
Trigger: ACGTCCTGAGGTATAATACAACAGAGCACTTTTTGA...TGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTCAAAAAGTGCTCTGTaGTATTATACCTCAGGACGT +
Preference number: 5 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFSKSAL*YYTSGR
Trigger: ACGTCCTGAGGTATAATACAACAGAGCACTTTTTGA...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CAGCTTTCAGTAATTATGAGAAGCACAGATATCACCAGAAAAGAAAGCAATCATACCGAAGAGTGTAGGTaGGTTTTTCAATTGCCTCAA +
Preference number: 5 (lower is better)
Translates to: QLSVIMRSTDITRKESNHTEECR*VFQLPQ
Trigger: TTGAGGCAATTGAAAAACCAACCTACACTCTTCGGT...ATGATTGCTTTCTTTTCTGGTGATATCTGTGCTTCTCATAATTACTGAAAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TTCCAAAGTTACTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTCATTTGTATAGTTGGTaGAGCTGCTTTGTTTGGACA +
Preference number: 5 (lower is better)
Translates to: FQSYFQVNYISCWDTCLCHLYSW*SCFVWT
Trigger: TGTCCAAACAAAGCAGCTCAACCAACTATACAAATG...ACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAGTAACTTTGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS-3UTR CAA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTAACTTCTTCATTGCTTaGGGAGGAGAACTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: FQVNYISCWDTCLCASHFNFFIA*GGELSE
Trigger: TTCTGAAAGTTCTCCTCCCAAAGCAATGAAGAAGTT...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTGACCTGTCTACCTTAATATaGCCTTTTGGGAATACAGTA +
Preference number: 5 (lower is better)
Translates to: QVNYISCWDTCLCASHFDLSTLI*PFGNTV
Trigger: TACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG...GTCAAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TGTAGGTTGGTTTTTCAATTGCCTCAAAAAGTGCTCTGTTGTATTATACCTCAGCTGTCTACCTTAATATaGCCTTTTGGGAATACAGTA +
Preference number: 5 (lower is better)
Translates to: CRLVFQLPQKVLCCIIPQLSTLI*PFGNTV
Trigger: TACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG...CTGAGGTATAATACAACAGAGCACTTTTTGAGGCAATTGAAAAACCAACCTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp CTTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTCCCATCCATACAATTaGGAATATCAACTGTGTACA +
Preference number: 5 (lower is better)
Translates to: LPSKLHFMLGYLLMCITFSHPYN*EYQLCT
Trigger: TGTACACAGTTGATATTCCAAATTGTATGGATGGGA...AAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS-3UTR CAA 90 bp TTCCAAGTAAATTACATTTCATGCTGGGATACCTGCTTATGTGCATCACATTTTCTGTCTACCTTAATATaGCCTTTTGGGAATACAGTA +
Preference number: 5 (lower is better)
Translates to: FQVNYISCWDTCLCASHFLSTLI*PFGNTV
Trigger: TACTGTATTCCCAAAAGGCAATATTAAGGTAGACAG...AAAATGTGATGCACATAAGCAGGTATCCCAGCATGAAATGTAATTTACTTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552491.5
ENST00000552783.5
ENST00000552823.5
CDS GCA 72 bp CTTGAAAACTGGCTAAAAGCCGCCTTTCCTCTGCGCTaGTACCAGCCCTGTCACAGGTCCCGGCGCTCTACC +
Preference number: 6 (lower is better)
Translates to: LENWLKAAFPLR*YQPCHRSRRST
Trigger: GGTAGAGCGCCGGGACCTGTGACAGGGCTGGTAGCAGCGCAGAGGAAAGGCGGCTTTTAGCCAGTTTTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551691.5
CDS CCA 72 bp CCTGGGAGTCACCTGGGGAGTCATCTTCGGCAGGGGTaGAACGGACTGCCAGGCTATTCTCATTTGCAGAAA +
Preference number: 6 (lower is better)
Translates to: PGSHLGSHLRQG*NGLPGYSHLQK
Trigger: TTTCTGCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATGACTCCCCAGGTGACTCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394943.7
ENST00000552783.5
CDS CAA 72 bp CTTCTTGGTCAGCTTTGGCTCCAGAAGCAGCGTGGCTaGTCACTTCAGCAGGAGGATGGTCTGCTCTGTGCC +
Preference number: 6 (lower is better)
Translates to: LLGQLWLQKQRG*SLQQEDGLLCA
Trigger: GGCACAGAGCAGACCATCCTCCTGCTGAAGTGACAAGCCACGCTGCTTCTGGAGCCAAAGCTGACCAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550611.1
ENST00000551691.5
ENST00000552720.5
ENST00000552783.5
CDS CCA 72 bp CCAGAAGCAGCGTGGCTTGTCACTTCAGCAGGAGGATaGTCTGCTCTGTGCCTAATCTCAGTGCTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: PEAAWLVTSAGG*SALCLISVLLF
Trigger: GAACAGCAGCACTGAGATTAGGCACAGAGCAGACCATCCTCCTGCTGAAGTGACAAGCCACGCTGCTTCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550611.1
ENST00000551691.5
ENST00000552720.5
ENST00000552783.5
CDS TCA 72 bp GTGGGGATATCGACCCTGAACGAGGGCTTCAGGAGGTaGCCTGAGTCTAGATCTGGGGTGGATTTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: VGISTLNEGFRR*PESRSGVDLFF
Trigger: GAAGAACAAATCCACCCCAGATCTAGACTCAGGTCACCTCCTGAAGCCCTCGTTCAGGGTCGATATCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550611.1
ENST00000552720.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS TCA 72 bp AGATCCTCACCGTCCTTGATGTGGGGATATCGACCCTaGACGAGGGCTTCAGGAGGTGACCTGAGTCTAGAT +
Preference number: 6 (lower is better)
Translates to: RSSPSLMWGYRP*TRASGGDLSLD
Trigger: ATCTAGACTCAGGTCACCTCCTGAAGCCCTCGTTCAGGGTCGATATCCCCACATCAAGGACGGTGAGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550611.1
ENST00000552720.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS GCA 72 bp GTCACGGGAGTCATCTTCGGCAGGGGTGGAACGGACTaGCAGGCTATTCTCATTTGCAGAAATCTTTTCCCC +
Preference number: 6 (lower is better)
Translates to: VTGVIFGRGGTD*QAILICRNLFP
Trigger: GGGGAAAAGATTTCTGCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATGACTCCCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000547825.5
ENST00000552008.5
ENST00000552491.5
ENST00000552720.5
ENST00000552823.5
ENST00000552909.5
CDS CCA 72 bp TGCAGGTGCCTGAAAGGGAGTCATCTTCGGCAGGGGTaGAACGGACTGCCAGGCTATTCTCATTTGCAGAAA +
Preference number: 6 (lower is better)
Translates to: CRCLKGSHLRQG*NGLPGYSHLQK
Trigger: TTTCTGCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATGACTCCCTTTCAGGCACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552338.5
CDS TCA 72 bp GAATCTGGACTTAGTGGCTTGGGATGGACAGGCTGTTaGACCTCACTCTTAACCTGGGAGTCACGGGAGTCA +
Preference number: 6 (lower is better)
Translates to: ESGLSGLGWTGC*TSLLTWESRES
Trigger: TGACTCCCGTGACTCCCAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000547825.5
ENST00000552008.5
ENST00000552491.5
ENST00000552720.5
ENST00000552823.5
ENST00000552909.5
CDS GCA 72 bp TGGCTTGTCACTTCAGCAGGAGGATGGTCTGCTCTGTaGCTAATCTCAGTGCTGCTGTTCCGTAGAGAGTCT +
Preference number: 6 (lower is better)
Translates to: WLVTSAGGWSAL*LISVLLFRRES
Trigger: AGACTCTCTACGGAACAGCAGCACTGAGATTAGGCACAGAGCAGACCATCCTCCTGCTGAAGTGACAAGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550592.1
ENST00000550611.1
ENST00000551691.5
ENST00000552720.5
ENST00000552783.5
CDS GCA 72 bp CTTACGGGAGTCATCTTCGGCAGGGGTGGAACGGACTaGCAGGCTATTCTCATTTGCAGAAATCTTTTCCCC +
Preference number: 6 (lower is better)
Translates to: LTGVIFGRGGTD*QAILICRNLFP
Trigger: GGGGAAAAGATTTCTGCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATGACTCCCGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552045.1
CDS CCA 72 bp GACCTGAGTCTAGATCTGGGGTGGATTTGTTCTTCTTaGTCAGCTTTGGCTCCAGAAGCAGCGTGGCTTGTC +
Preference number: 6 (lower is better)
Translates to: DLSLDLGWICSS*SALAPEAAWLV
Trigger: GACAAGCCACGCTGCTTCTGGAGCCAAAGCTGACCAAGAAGAACAAATCCACCCCAGATCTAGACTCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550611.1
ENST00000552720.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS TCA 72 bp AAGCTGCTCCTGGTCCACTGCTGTTTCAGACAGCTGTaGACAGTTACAGCCTTGCCACATGGAGAAAGCATC +
Preference number: 6 (lower is better)
Translates to: KLLLVHCCFRQL*TVTALPHGESI
Trigger: GATGCTTTCTCCATGTGGCAAGGCTGTAACTGTTCACAGCTGTCTGAAACAGCAGTGGACCAGGAGCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552783.5
CDS TCA 72 bp CAGCTAGGGGACCAGGGCTCAGATACAAGGGTCTGGTaGCATTTCCTAATTCCAGTACTCAGTGACCATCTG +
Preference number: 6 (lower is better)
Translates to: QLGDQGSDTRVW*HFLIPVLSDHL
Trigger: CAGATGGTCACTGAGTACTGGAATTAGGAAATGTCACCAGACCCTTGTATCTGAGCCCTGGTCCCCTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551486.1
CDS CCA 72 bp CTTTGGGAGGAGAACTTTCAGAAAGACTGGAGGCTCTaGAATCTGGACTTAGTGGCTTGGGATGGACAGGCT +
Preference number: 6 (lower is better)
Translates to: LWEENFQKDWRL*NLDLVAWDGQA
Trigger: AGCCTGTCCATCCCAAGCCACTAAGTCCAGATTCCAGAGCCTCCAGTCTTTCTGAAAGTTCTCCTCCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000547825.5
ENST00000552008.5
ENST00000552491.5
ENST00000552720.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS CCA 72 bp AGAAAGAATGCTTACGGGAGTCATCTTCGGCAGGGGTaGAACGGACTGCCAGGCTATTCTCATTTGCAGAAA +
Preference number: 6 (lower is better)
Translates to: RKNAYGSHLRQG*NGLPGYSHLQK
Trigger: TTTCTGCAAATGAGAATAGCCTGGCAGTCCGTTCCACCCCTGCCGAAGATGACTCCCGTAAGCATTCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552045.1
CDS CAA 72 bp CTAGAGAATAGCTGTTTTCAGAGATCTTCCTTCCACTaGCACTTCGGCTTTGGGCCCGGAGAATCTTTGGCC +
Preference number: 6 (lower is better)
Translates to: LENSCFQRSSFH*HFGFGPGESLA
Trigger: GGCCAAAGATTCTCCGGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATCTCTGAAAACAGCTATTCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552008.5
CDS CAA 90 bp CCAGGTCATCTAGAGAATAGCTGTTTTCAGAGATCTTCCTTCCACTaGCACTTCGGCTTTGGGCCCGGAGAATCTTTGGCCAGTTTCAAC +
Preference number: 6 (lower is better)
Translates to: PGHLENSCFQRSSFH*HFGFGPGESLASFN
Trigger: GTTGAAACTGGCCAAAGATTCTCCGGGCCCAAAGCCGAAGTGCAAGTGGAAGGAAGATCTCTGAAAACAGCTATTCTCTAGATGACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552008.5
CDS TCA 72 bp GCCACCACTGGCTTTCAGCTCATTTGTATAGTTGGTTaGGCTGCTTTGTTTGGACACAGCTGCCTGGTACTT +
Preference number: 6 (lower is better)
Translates to: ATTGFQLICIVG*AALFGHSCLVL
Trigger: AAGTACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATACAAATGAGCTGAAAGCCAGTGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552720.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS GCA 72 bp CACTGGCTTTCAGCTCATTTGTATAGTTGGTTGAGCTaGTTTGTTTGGACACAGCTGCCTGGTACTTGGCCA +
Preference number: 6 (lower is better)
Translates to: HWLSAHLYSWLS*FVWTQLPGTWP
Trigger: TGGCCAAGTACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATACAAATGAGCTGAAAGCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000552720.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS GCA 72 bp AAAACAAGAACCTCATCCTCCAGATCTAAGAAAGAATaGTTACGGGAGTCATCTTCGGCAGGGGTGGAACGG +
Preference number: 6 (lower is better)
Translates to: KTRTSSSRSKKE*LRESSSAGVER
Trigger: CCGTTCCACCCCTGCCGAAGATGACTCCCGTAAGCATTCTTTCTTAGATCTGGAGGATGAGGTTCTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552045.1
CDS TCA 72 bp CTGGTACTTGGCCATTCGATCCTTTATAGAGGTTTCTaGGAGGCGTGGAAGTTCCAGATTTCGTCTACTCTC +
Preference number: 6 (lower is better)
Translates to: LVLGHSILYRGF*EAWKFQISSTL
Trigger: GAGAGTAGACGAAATCTGGAACTTCCACGCCTCTCAGAAACCTCTATAAAGGATCGAATGGCCAAGTACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000551486.1
ENST00000552008.5
ENST00000552720.5
ENST00000552783.5
ENST00000552823.5
ENST00000552909.5
CDS GCA 72 bp ACATATATAAATGCCCGGCTGTATAGTTGGTTGAGCTaGTTTGTTTGGACACAGCTGCCTGGTACTTGGCCA +
Preference number: 6 (lower is better)
Translates to: TYINARLYSWLS*FVWTQLPGTWP
Trigger: TGGCCAAGTACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATACAGCCGGGCATTTATATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552008.5
CDS TCA 72 bp AGGCACACAGAACACCCCAAGCATACAACATTCTTGTaGTTCACTCTTCTAGCAGCAGAGCTTGTGGTAATG +
Preference number: 6 (lower is better)
Translates to: RHTEHPKHTTFL*FTLLAAELVVM
Trigger: CATTACCACAAGCTCTGCTGCTAGAAGAGTGAATCACAAGAATGTTGTATGCTTGGGGTGTTCTGTGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547825.5
CDS GCA 72 bp AATGATGCAGAACACATACTGTATAGTTGGTTGAGCTaGTTTGTTTGGACACAGCTGCCTGGTACTTGGCCA +
Preference number: 6 (lower is better)
Translates to: NDAEHILYSWLS*FVWTQLPGTWP
Trigger: TGGCCAAGTACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATACAGTATGTGTTCTGCATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551486.1
CDS CAA 90 bp TTTCAGCTCATTCATACATATATAAATGCCCGGCTGTATAGTTGGTaGAGCTGCTTTGTTTGGACACAGCTGCCTGGTACTTGGCCATTC +
Preference number: 6 (lower is better)
Translates to: FQLIHTYINARLYSW*SCFVWTQLPGTWPF
Trigger: GAATGGCCAAGTACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATACAGCCGGGCATTTATATATGTATGAATGAGCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552008.5
CDS CCA 72 bp ACCCTAGAATTTACTTTGTCTAAGGGCTCCCTTAGCTaGTCAGTCAATTCTCATGGAGCACTAAACCTGCTA +
Preference number: 6 (lower is better)
Translates to: TLEFTLSKGSLS*SVNSHGALNLL
Trigger: TAGCAGGTTTAGTGCTCCATGAGAATTGACTGACCAGCTAAGGGAGCCCTTAGACAAAGTAAATTCTAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549064.1
CDS CCA 72 bp CTCATTCATACATATATAAATGCCCGGCTGTATAGTTaGTTGAGCTGCTTTGTTTGGACACAGCTGCCTGGT +
Preference number: 6 (lower is better)
Translates to: LIHTYINARLYS*LSCFVWTQLPG
Trigger: ACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATACAGCCGGGCATTTATATATGTATGAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552008.5
CDS CAA 72 bp GCCGATGACTTGTTCTTGTTGACAAGAGAAAGTTCTTaGGCTGTTACCCTCAATGATAGTGAGGTCCATTGC +
Preference number: 6 (lower is better)
Translates to: ADDLFLLTRESS*AVTLNDSEVHC
Trigger: GCAATGGACCTCACTATCATTGAGGGTAACAGCCAAAGAACTTTCTCTTGTCAACAAGAACAAGTCATCGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550592.1
ENST00000551691.5
ENST00000552720.5
CDS GCA 72 bp TTCTTCTTTAACACAGTCAGGGTCCCCTTTCTAAAGTaGTGGGAGAGATTTTCGGTGTTACTTCTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: FFFNTVRVPFLK*WERFSVLLLFF
Trigger: GAAGAAGAGAAGTAACACCGAAAATCTCTCCCAGCACTTTAGAAAGGGGACCCTGACTGTGTTAAAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550592.1
ENST00000551691.5
ENST00000552720.5
CDS GCA 72 bp TTCTTCTTTAACACAGTCAGGGTCCCCTTTCTAAAGTaGTGGGAGAGATTTTCGGTGTTCCTATTACTCTTC +
Preference number: 6 (lower is better)
Translates to: FFFNTVRVPFLK*WERFSVFLLLF
Trigger: GAAGAGTAATAGGAACACCGAAAATCTCTCCCAGCACTTTAGAAAGGGGACCCTGACTGTGTTAAAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550611.1
CDS CAA 72 bp ATTCATACATATATAAATGCCCGGCTGTATAGTTGGTaGAGCTGCTTTGTTTGGACACAGCTGCCTGGTACT +
Preference number: 6 (lower is better)
Translates to: IHTYINARLYSW*SCFVWTQLPGT
Trigger: AGTACCAGGCAGCTGTGTCCAAACAAAGCAGCTCAACCAACTATACAGCCGGGCATTTATATATGTATGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552008.5
CDS CAA 90 bp TCCACAATAGCCGATGACTTGTTCTTGTTGACAAGAGAAAGTTCTTaGGCTGTTACCCTCAATGATAGTGAGGTCCATTGCCGTCTATTA +
Preference number: 6 (lower is better)
Translates to: STIADDLFLLTRESS*AVTLNDSEVHCRLL
Trigger: TAATAGACGGCAATGGACCTCACTATCATTGAGGGTAACAGCCAAAGAACTTTCTCTTGTCAACAAGAACAAGTCATCGGCTATTGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550592.1
ENST00000551691.5
ENST00000552720.5
CDS CAA 90 bp GCTGCTTTCTGGTACTTGGAGAATATTTCCACAATAGCCGATGACTaGTTCTTGTTGACAAGAGAAAGTTCTTTGGCTGTTACCCTCAAT +
Preference number: 6 (lower is better)
Translates to: AAFWYLENISTIADD*FLLTRESSLAVTLN
Trigger: ATTGAGGGTAACAGCCAAAGAACTTTCTCTTGTCAACAAGAACAAGTCATCGGCTATTGTGGAAATATTCTCCAAGTACCAGAAAGCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550592.1
ENST00000551691.5
ENST00000552720.5
CDS CAA 90 bp TGGTACTTGGAGAATATTTCCACAATAGCCGATGACTTGTTCTTGTaGACAAGAGAAAGTTCTTTGGCTGTTACCCTCAATGATAGTGAG +
Preference number: 6 (lower is better)
Translates to: WYLENISTIADDLFL*TRESSLAVTLNDSE
Trigger: CTCACTATCATTGAGGGTAACAGCCAAAGAACTTTCTCTTGTCAACAAGAACAAGTCATCGGCTATTGTGGAAATATTCTCCAAGTACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550592.1
ENST00000551691.5
ENST00000552720.5
CDS TCA 72 bp TTTCTGGTACTTGGAGAATATTTCCACAATAGCCGATaGCTTGTTCTTGTTGACAAGAGAAAGTTCTTTGGC +
Preference number: 6 (lower is better)
Translates to: FLVLGEYFHNSR*LVLVDKRKFFG
Trigger: GCCAAAGAACTTTCTCTTGTCAACAAGAACAAGTCATCGGCTATTGTGGAAATATTCTCCAAGTACCAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550592.1
ENST00000551691.5
ENST00000552720.5
CDS CAA 72 bp GAGAATATTTCCACAATAGCCGATGACTTGTTCTTGTaGACAAGAGAAAGTTCTTTGGCTGTTACCCTCAAT +
Preference number: 6 (lower is better)
Translates to: ENISTIADDLFL*TRESSLAVTLN
Trigger: ATTGAGGGTAACAGCCAAAGAACTTTCTCTTGTCAACAAGAACAAGTCATCGGCTATTGTGGAAATATTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341247.8
ENST00000394943.7
ENST00000550592.1
ENST00000551691.5
ENST00000552720.5
CDS CAA 72 bp GTTCTAGAAGAACAAGAAGTAGATGCCAGTTATAACTaGCCTGCTGAAACATTCAAACATGTTGTTCTTTGT +
Preference number: 6 (lower is better)
Translates to: VLEEQEVDASYN*PAETFKHVVLC
Trigger: ACAAAGAACAACATGTTTGAATGTTTCAGCAGGCAAGTTATAACTGGCATCTACTTCTTGTTCTTCTAGAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552783.5