RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LGI4 (Homo sapiens)

Ensembl gene IDs: ENSG00000153902

Ensembl transcript IDs: ENST00000310123.8, ENST00000392225.7, ENST00000473160.6, ENST00000493050.5, ENST00000587780.5, ENST00000591633.2, ENST00000591840.5, ENST00000592346.1, ENST00000593248.5

Found 495 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTaGCCCGGCGCACGCGCAAGAGGCGCAAAAGGCACAGCTTGCTGG +
Preference number: 1 (lower is better)
Translates to: EGHQAPRDTSRCPSL*PGARARGAKGTACW
Trigger: CCAGCAAGCTGTGCCTTTTGCGCCTCTTGCGCGTGCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR CCA 90 bp CGGAGGACCTGGCTGAAGGCGAAGTCGCTGCCTAGGATGGCCAGCTaGTCCCTGGCGATGAGCAGTGGCTGGAAGACGTGGGCACCGCGC +
Preference number: 1 (lower is better)
Translates to: RRTWLKAKSLPRMAS*SLAMSSGWKTWAPR
Trigger: GCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGCCAGGGACCAGCTGGCCATCCTAGGCAGCGACTTCGCCTTCAGCCAGGTCCTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR TCA 90 bp GTGGCTCCAGGAGCCCCTTGTCAGGCTCAAGGCGGAGGACCTGGCTaGAGGCGAAGTCGCTGCCTAGGATGGCCAGCTGGTCCCTGGCGA +
Preference number: 1 (lower is better)
Translates to: VAPGAPCQAQGGGPG*RRSRCLGWPAGPWR
Trigger: TCGCCAGGGACCAGCTGGCCATCCTAGGCAGCGACTTCGCCTTCAGCCAGGTCCTCCGCCTTGAGCCTGACAAGGGGCTCCTGGAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR CCA 90 bp TCGCTGCCTAGGATGGCCAGCTGGTCCCTGGCGATGAGCAGTGGCTaGAAGACGTGGGCACCGCGCGAGGGAAGTTGCTGCAGCAGACGA +
Preference number: 1 (lower is better)
Translates to: SLPRMASWSLAMSSG*KTWAPREGSCCSRR
Trigger: TCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGCCAGGGACCAGCTGGCCATCCTAGGCAGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR CCA 90 bp TGCAGTGGCTCCAGGAGCCCCTTGTCAGGCTCAAGGCGGAGGACCTaGCTGAAGGCGAAGTCGCTGCCTAGGATGGCCAGCTGGTCCCTG +
Preference number: 1 (lower is better)
Translates to: CSGSRSPLSGSRRRT*LKAKSLPRMASWSL
Trigger: CAGGGACCAGCTGGCCATCCTAGGCAGCGACTTCGCCTTCAGCCAGGTCCTCCGCCTTGAGCCTGACAAGGGGCTCCTGGAGCCACTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR TCA 90 bp GCCGCACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTaGGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCT +
Preference number: 1 (lower is better)
Translates to: AARMRTSSRGEPAQC*VVFEVGAPPGKRLA
Trigger: AGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR GCA 90 bp ATGAGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTTGCTaGAGCAGACGAAACATGGAGCCGTCCCAGCGCATGACCTGTGGG +
Preference number: 1 (lower is better)
Translates to: MSSGWKTWAPREGSC*SRRNMEPSQRMTCG
Trigger: CCCACAGGTCATGCGCTGGGACGGCTCCATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR GCA 90 bp GCGATGAGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTTaGTGCAGCAGACGAAACATGGAGCCGTCCCAGCGCATGACCTGT +
Preference number: 1 (lower is better)
Translates to: AMSSGWKTWAPREGS*CSRRNMEPSQRMTC
Trigger: ACAGGTCATGCGCTGGGACGGCTCCATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR CCA 90 bp AGGATGGCCAGCTGGTCCCTGGCGATGAGCAGTGGCTGGAAGACGTaGGCACCGCGCGAGGGAAGTTGCTGCAGCAGACGAAACATGGAG +
Preference number: 1 (lower is better)
Translates to: RMASWSLAMSSGWKT*APREGSCCSRRNME
Trigger: CTCCATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGCCAGGGACCAGCTGGCCATCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR TCA 90 bp CTCCTCTCCCTGCTCCCCCAGTCTGTTCCCCACCCAGAGACCTTGTaGACACCTGAGTCAGATCAGGGCCCTTCCAGACTCAGAACCCTC +
Preference number: 1 (lower is better)
Translates to: LLSLLPQSVPHPETL*TPESDQGPSRLRTL
Trigger: GAGGGTTCTGAGTCTGGAAGGGCCCTGATCTGACTCAGGTGTTCACAAGGTCTCTGGGTGGGGAACAGACTGGGGGAGCAGGGAGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR GCA 90 bp GTTGCCTTTGATGGGGAATCTGCCCCAGCCGAGATGTCCAGATGTTaGTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGA +
Preference number: 1 (lower is better)
Translates to: VAFDGESAPAEMSRC*FRPEGQLGRSSRLG
Trigger: TCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGGACATCTCGGCTGGGGCAGATTCCCCATCAAAGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR CCA 90 bp AAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTaGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATG +
Preference number: 1 (lower is better)
Translates to: KQQRGTRPVLSCLRG*RSSRKAIGCVEFRM
Trigger: CATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR GCA 90 bp TCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATaGCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGA +
Preference number: 1 (lower is better)
Translates to: SRKAIGCVEFRMGKE*HQPLGAFRGTSGVG
Trigger: TCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR CCA 90 bp GTTGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATaGGAAAGGAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCA +
Preference number: 1 (lower is better)
Translates to: VGAPPGKRLAAWSLE*ERNAINPSVLSEGP
Trigger: TGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR GCA 90 bp CTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTaGGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGT +
Preference number: 1 (lower is better)
Translates to: LSCLRGWRSSRKAIG*VEFRMGKECHQPLG
Trigger: ACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR CCA 90 bp GTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTaGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGCTT +
Preference number: 1 (lower is better)
Translates to: VVFEVGAPPGKRLAA*SLEWERNAINPSVL
Trigger: AAGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR GCA 90 bp TCTTATCTTCATAAAAGTCACCACCCACCTGTTCGGCCACACACATaGAGTTGTTCTGAGCCCTTCCCTTGCCCTCACGCCCCACACAGA +
Preference number: 1 (lower is better)
Translates to: SYLHKSHHPPVRPHT*SCSEPFPCPHAPHR
Trigger: TCTGTGTGGGGCGTGAGGGCAAGGGAAGGGCTCAGAACAACTGCATGTGTGTGGCCGAACAGGTGGGTGGTGACTTTTATGAAGATAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR TCA 90 bp TATAAGGACCTCCTGTCCCAGGCCCGGCGCCAAATGCCGAACACGTaGAGATGTATCATTGAATTCCCATGGCACTCCTATATCACTGTT +
Preference number: 1 (lower is better)
Translates to: YKDLLSQARRQMPNT*RCIIEFPWHSYITV
Trigger: AACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGGCCTGGGACAGGAGGTCCTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
3UTR-3UTR CCA 90 bp GGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCAAAAGGCACAGCTTGCTaGGCGGCCGCACGCATGCGC +
Preference number: 2 (lower is better)
Translates to: GHQAPRDTSRCPSLCPGAKGTAC*AAARMR
Trigger: GCGCATGCGTGCGGCCGCCCAGCAAGCTGTGCCTTT...TGCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR-3UTR GCA 90 bp CACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCGGAGGCCCCAGCTCCTaGAGTGGCTCCAGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: HGQQLTGGPSPQVGPGASGGPSS*SGSRSP
Trigger: GGGGCTCCTGGAGCCACTGCAGGAGCTGGGGCCTCC...GCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CCA 90 bp CAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCGCGATGAGCAGTGGCTaGAAGACGTGGGCACCGCGC +
Preference number: 2 (lower is better)
Translates to: QLTGGPSPQVGPGASQGAAMSSG*KTWAPR
Trigger: GCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGC...GGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR TCA 90 bp CAGCTTGCTGGGCGGCCGCACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCATGGAGCTCTGCACGTaGCCTCCACCTCGACTCCAT +
Preference number: 2 (lower is better)
Translates to: QLAGRPHACAQAAEGNPPMELCT*PPPRLH
Trigger: ATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCCAT...GGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTGCGGCCGCCCAGCAAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR-3UTR TCA 90 bp CAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCAACTCCATCCCCTCCTaGCTGGACCATCCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: QLTGGPSPQVGPGASQGANSIPS*LDHPGS
Trigger: GCTGCCAGGATGGTCCAGTCAGGAGGGGATGGAGTT...GGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR TCA 90 bp CACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCGCTGGTCCCTGGCGATaGGCAGTGGCTGGAAGACGT +
Preference number: 2 (lower is better)
Translates to: HGQQLTGGPSPQVGPGASAGPWR*AVAGRR
Trigger: ACGTCTTCCAGCCACTGCTCATCGCCAGGGACCAGC...GCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR GCA 90 bp CAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCGGAGGCCCCAGCTCCTaGAGTGGCTCCAGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: QAAEGNPPSAELSSRLALGGPSS*SGSRSP
Trigger: GGGGCTCCTGGAGCCACTGCAGGAGCTGGGGCCTCC...GAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR GCA 90 bp GCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCAGGGGCCCCAGCCATaGCCAGAGTCCCGTTGGTGG +
Preference number: 2 (lower is better)
Translates to: AQAAEGNPPSAELSSRLAQGPQP*PESRWW
Trigger: CCACCAACGGGACTCTGGGCATGGCTGGGGCCCCTG...CGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR GCA 90 bp CACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCTCTGAGCCCTTCCCTTaGCCTCACGCCCCACACAGA +
Preference number: 2 (lower is better)
Translates to: HGQQLTGGPSPQVGPGASSEPFP*PHAPHR
Trigger: TCTGTGTGGGGCGTGAGGGCAAGGGAAGGGCTCAGA...GCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR CAA 90 bp GGCGATGAGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTaGCTGCAGCAGACGAAACATGGAGCCGTCCCAGCGCATGACCTG +
Preference number: 2 (lower is better)
Translates to: GDEQWLEDVGTARGK*LQQTKHGAVPAHDL
Trigger: CAGGTCATGCGCTGGGACGGCTCCATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR TCA 90 bp CACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCGGTGGTCTCAGGCACTaGGGTCGATCTCGTGATGCT +
Preference number: 2 (lower is better)
Translates to: HGQQLTGGPSPQVGPGASGGLRH*GRSRDA
Trigger: AGCATCACGAGATCGACCTCAGTGCCTGAGACCACC...GCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR GCA 90 bp AGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGAGAATGGGAAAGGAATaGCATCAACCCCTCGGTGCT +
Preference number: 2 (lower is better)
Translates to: RRAPGSPRHLPLSLPVPRRMGKE*HQPLGA
Trigger: AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCT...CCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR-3UTR GCA 90 bp ACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTCGCTGTCCCTCCCTGTaGCCCGGCGCACGCGCAAGA +
Preference number: 2 (lower is better)
Translates to: TRPVLSCLRGWRSSRKAIRCPSL*PGARAR
Trigger: TCTTGCGCGTGCGCCGGGGCACAGGGAGGGACAGCG...AATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR-3UTR CCA 90 bp GGGGCCCCAGCCATGCCCAGAGTCCCGTTGGTGGTCTCAGGCACTGAGGTCGATTGCCCAGAGTCCCGTTaGTGGTCTCAGGCACTGAGG +
Preference number: 2 (lower is better)
Translates to: GAPAMPRVPLVVSGTEVDCPESR*WSQALR
Trigger: CCTCAGTGCCTGAGACCACCAACGGGACTCTGGGCA...ATCGACCTCAGTGCCTGAGACCACCAACGGGACTCTGGGCATGGCTGGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR GCA 90 bp AGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACCCCAGGGGCCCCAGCCATaGCCAGAGTCCCGTTGGTGG +
Preference number: 2 (lower is better)
Translates to: RCCFRPEGQLGRSSRLGPQGPQP*PESRWW
Trigger: CCACCAACGGGACTCTGGGCATGGCTGGGGCCCCTG...GGGTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR GCA 90 bp GGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCTCCACCTCGACTCCATaGAGTGCACCAGCCTGCACC +
Preference number: 2 (lower is better)
Translates to: GALHVTSTSTPCSAPACTSTSTP*SAPACT
Trigger: GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGA...GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR GCA 90 bp CTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCAGAATGGGAAAGGAATaGCATCAACCCCTCGGTGCT +
Preference number: 2 (lower is better)
Translates to: LEGHQAPRDTSRCPSLCPRMGKE*HQPLGA
Trigger: AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCT...GGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR CAA 90 bp CACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTaGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTGCGT +
Preference number: 2 (lower is better)
Translates to: HACAQAAEGNPPSAE*SSRLALLQESDWLR
Trigger: ACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR-3UTR TCA 90 bp CATCTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCGCACAGCGCATTTATTaGGCTCGGACTCGTCTTGTC +
Preference number: 2 (lower is better)
Translates to: HLEGHQAPRDTSRCPSLCAQRIY*ARTRLV
Trigger: GACAAGACGAGTCCGAGCTCAATAAATGCGCTGTGC...GCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR-3UTR GCA 90 bp GCCGAGATGTCCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTCAGGGGCCCCAGCCATaGCCAGAGTCCCGTTGGTGG +
Preference number: 2 (lower is better)
Translates to: AEMSRCCFRPEGQLGRSSQGPQP*PESRWW
Trigger: CCACCAACGGGACTCTGGGCATGGCTGGGGCCCCTG...ACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGGACATCTCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR GCA 90 bp GAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTCCACCTCGACTCCATaGAGTGCACCAGCCTGCACC +
Preference number: 2 (lower is better)
Translates to: ECHQPLGAFRGTSGVGAGSTSTP*SAPACT
Trigger: GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGA...ACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR GCA 90 bp CACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGCCATCAACCCCTCGGTaGTTTCAGAGGGACCAGCGG +
Preference number: 2 (lower is better)
Translates to: HACAQAAEGNPPSAELSSPSTPR*FQRDQR
Trigger: CCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGG...CGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR-3UTR GCA 90 bp GGAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGCTCAGAACCCTCCCCTaGCTGCACCTCACTCCAGAA +
Preference number: 2 (lower is better)
Translates to: GMPSTPRCFQRDQRGRSGLRTLP*LHLTPE
Trigger: TTCTGGAGTGAGGTGCAGGCAGGGGAGGGTTCTGAG...CCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR CCA 90 bp GGGCGGCCGCACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGAAGCGATTGGCTGCGTaGAGTTTAGAATGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: GRPHACAQAAEGNPPSAEKRLAA*SLEWER
Trigger: CCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTT...CTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTGCGGCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR-3UTR CCA 90 bp GAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTAGGGGGTCAGAGTCTTaGCATCAGTGTGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: ECHQPLGAFRGTSGVGAGRGSES*HQCGVG
Trigger: CCCCACCCCACACTGATGCCAAGACTCTGACCCCCT...ACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR CCA 90 bp GGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCATCAGTGTCGGGGACTaGGGAGTGGTTCGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: GALHVTSTSTPCSAPACTISVGD*GVVRSQ
Trigger: CTGACTCCGAACCACTCCCCAGTCCCCGACACTGAT...GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR TCA 90 bp TCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGAGAGGGCAGGTGTGGCTGTGGTaGAGTCTGGAATGCATCCGA +
Preference number: 2 (lower is better)
Translates to: STPRCFQRDQRGRSGLRGQVWLW*SLECIR
Trigger: TCGGATGCATTCCAGACTTCACCACAGCCACACCTG...CCCTCTCAACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR GCA 90 bp CCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCCATCAACCCCTCGGTaGTTTCAGAGGGACCAGCGG +
Preference number: 2 (lower is better)
Translates to: PPSAELSSRLALLQESDWPSTPR*FQRDQR
Trigger: CCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGG...CCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CCA 90 bp ACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTCCGGGACCTCATaGAGCTCTGCACGTGACCTC +
Preference number: 2 (lower is better)
Translates to: TRPVLSCLRGWRSSRKAIGSGTS*SSARDL
Trigger: GAGGTCACGTGCAGAGCTCCATGAGGTCCCGGAGCC...AATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CCA 90 bp CGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGAAGGGCACCAGGCTCCCAGTTGTCTTCGAGGTTaGCGCTCCTCCAGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: RTRLVLASVAHLEGHQAPSCLRG*RSSRKA
Trigger: CGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACT...GGGAGCCTGGTGCCCTTCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR-3UTR CCA 90 bp GGAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGAGTTGTCTTCGAGGTTaGCGCTCCTCCAGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: GMPSTPRCFQRDQRGRSGSCLRG*RSSRKA
Trigger: CGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACT...CCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CCA 90 bp CAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCTTCTCCCACCACCTCTaGCTGAACTCCATCCCCTCC +
Preference number: 2 (lower is better)
Translates to: QAAEGNPPSAELSSRLALFSHHL*LNSIPS
Trigger: GGAGGGGATGGAGTTCAGCCAGAGGTGGTGGGAGAA...GAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR CCA 90 bp CCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACTCAAGGCGGAGGACCTaGCTGAAGGCGAAGTCGCTG +
Preference number: 2 (lower is better)
Translates to: PDVALDLKGSSGGPVGWDSRRRT*LKAKSL
Trigger: CAGCGACTTCGCCTTCAGCCAGGTCCTCCGCCTTGA...GTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CCA 90 bp AGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACCCCCAGAGTCCCGTTGGTaGTCTCAGGCACTGAGGTCG +
Preference number: 2 (lower is better)
Translates to: RCCFRPEGQLGRSSRLGPPESRW*SQALRS
Trigger: CGACCTCAGTGCCTGAGACCACCAACGGGACTCTGG...GGGTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CCA 90 bp GGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCGTAGAATCAGGATGTTaGGGCCAGCATCAGTGTCGG +
Preference number: 2 (lower is better)
Translates to: GALHVTSTSTPCSAPACTVESGC*GQHQCR
Trigger: CCGACACTGATGCTGGCCCCAACATCCTGATTCTAC...GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR TCA 90 bp ACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTATGGAGCTCTGCACGTaGCCTCCACCTCGACTCCAT +
Preference number: 2 (lower is better)
Translates to: TRPVLSCLRGWRSSRKAIMELCT*PPPRLH
Trigger: ATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCCAT...AATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR GCA 90 bp GTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAGAGATGTCCAGATGTTaGTTTAGACCTGAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: VADERGPRSAAHRRAITPEMSRC*FRPEGQ
Trigger: CTGCCCTTCAGGTCTAAAGCAACATCTGGACATCTC...TGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR GCA 90 bp GAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAACTAGGCTCCTCTCCCTaGTCCCCCAGTCTGTTCCCC +
Preference number: 2 (lower is better)
Translates to: EVGAPPGKRLAAWSLEWELGSSP*SPSLFP
Trigger: GGGGAACAGACTGGGGGAGCAGGGAGAGGAGCCTAG...TTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR CCA 90 bp CACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCGCGTGGAGTTTAGAATaGGAAAGGAATGCCATCAAC +
Preference number: 2 (lower is better)
Translates to: HGQQLTGGPSPQVGPGASAWSLE*ERNAIN
Trigger: GTTGATGGCATTCCTTTCCCATTCTAAACTCCACGC...GCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR TCA 90 bp CCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACGACCTTGTGAACACCTaGGTCAGATCAGGGCCCTTC +
Preference number: 2 (lower is better)
Translates to: PDVALDLKGSSGGPVGWDDLVNT*VRSGPF
Trigger: GAAGGGCCCTGATCTGACTCAGGTGTTCACAAGGTC...GTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR GCA 90 bp GCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGAGAAACAGTGGGCAGTaGTTAACCCTAGCATCAGCC +
Preference number: 2 (lower is better)
Translates to: AHKQQRGTRPVLSCLRGWRNSGQ*LTLASA
Trigger: GGCTGATGCTAGGGTTAAGCACTGCCCACTGTTTCT...CCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR CCA 90 bp TTGGTGGTCTCAGGCACTGAGGTCGATCTCGTGATGCTGGTAGATCTGTGTGGGTCAAGGCGGAGGACCTaGCTGAAGGCGAAGTCGCTG +
Preference number: 2 (lower is better)
Translates to: LVVSGTEVDLVMLVDLCGSRRRT*LKAKSL
Trigger: CAGCGACTTCGCCTTCAGCCAGGTCCTCCGCCTTGA...CCCACACAGATCTACCAGCATCACGAGATCGACCTCAGTGCCTGAGACCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CCA 90 bp CCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCTCGGGGACTGGGGAGTaGTTCGGAGTCAGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: PPGKRLAAWSLEWERNAISGTGE*FGVSQP
Trigger: AGGCTGGCTGACTCCGAACCACTCCCCAGTCCCCGA...GATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR GCA 90 bp CCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGGAGATGTCCAGATGTTaGTTTAGACCTGAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: PPSAELSSRLALLQESDWEMSRC*FRPEGQ
Trigger: CTGCCCTTCAGGTCTAAAGCAACATCTGGACATCTC...CCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR GCA 90 bp ATGCTGGTAGATCTGTGTGGGGCCCTTAAAGCAAGCAGCAAAGAGGAAGCGTCTCCATCAACCCCTCGGTaGTTTCAGAGGGACCAGCGG +
Preference number: 2 (lower is better)
Translates to: MLVDLCGALKASSKEEASPSTPR*FQRDQR
Trigger: CCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGG...AGACGCTTCCTCTTTGCTGCTTGCTTTAAGGGCCCCACACAGATCTACCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR GCA 90 bp ACCTCATGGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCAGGAAAGCGATTGGCTaGGTGGAGTTTAGAATGGGA +
Preference number: 2 (lower is better)
Translates to: TSWSSARDLHLDSMQCTSRKAIG*VEFRMG
Trigger: TCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCT...GCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCCATGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR GCA 90 bp CATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTAGGAAAGCGATTGGCTaGGTGGAGTTTAGAATGGGA +
Preference number: 2 (lower is better)
Translates to: HAHKQQRGTRPVLSCLRGRKAIG*VEFRMG
Trigger: TCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCT...ACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CCA 90 bp ATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGCTCCAGAGTCCCGTTGGTaGTCTCAGGCACTGAGGTCG +
Preference number: 2 (lower is better)
Translates to: IGCVEFRMGKECHQPLGAPESRW*SQALRS
Trigger: CGACCTCAGTGCCTGAGACCACCAACGGGACTCTGG...AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR TCA 90 bp CCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCATGGAGCTCTGCACGTaGCCTCCACCTCGACTCCAT +
Preference number: 2 (lower is better)
Translates to: PPGKRLAAWSLEWERNAIMELCT*PPPRLH
Trigger: ATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCCAT...GATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CCA 90 bp ACCTCATGGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCGCGTGGAGTTTAGAATaGGAAAGGAATGCCATCAAC +
Preference number: 2 (lower is better)
Translates to: TSWSSARDLHLDSMQCTSAWSLE*ERNAIN
Trigger: GTTGATGGCATTCCTTTCCCATTCTAAACTCCACGC...GCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCCATGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CCA 90 bp AGATGTCCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCGGCTGTGGTGAAGTCTaGAATGCATCCGAGTCACAG +
Preference number: 2 (lower is better)
Translates to: RCPDVALDLKGSSGGPVGGCGEV*NASESQ
Trigger: CTGTGACTCGGATGCATTCCAGACTTCACCACAGCC...GCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR CCA 90 bp GGGCCCTTAAAGCAAGCAGCAAAGAGGAAGCGTCTGCCGGCCATAGTGATGTGGGCGTGGAGTTTAGAATaGGAAAGGAATGCCATCAAC +
Preference number: 2 (lower is better)
Translates to: GPLKQAAKRKRLPAIVMWAWSLE*ERNAIN
Trigger: GTTGATGGCATTCCTTTCCCATTCTAAACTCCACGC...CCACATCACTATGGCCGGCAGACGCTTCCTCTTTGCTGCTTGCTTTAAGGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CCA 90 bp TTCACCTTCTACAGTTGTACATTTCTCCCACCACCTCTGGCTGAACTCCATCCCTCACTCCAGAAACAGTaGGCAGTGCTTAACCCTAGC +
Preference number: 2 (lower is better)
Translates to: FTFYSCTFLPPPLAELHPSLQKQ*AVLNPS
Trigger: GCTAGGGTTAAGCACTGCCCACTGTTTCTGGAGTGA...GGGATGGAGTTCAGCCAGAGGTGGTGGGAGAAATGTACAACTGTAGAAGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR GCA 72 bp CAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTaGCCCGGCGCACGCGCAAGAGGCGCAAAAGGCACA +
Preference number: 3 (lower is better)
Translates to: QAPRDTSRCPSL*PGARARGAKGT
Trigger: TGTGCCTTTTGCGCCTCTTGCGCGTGCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR-3UTR CAA 90 bp CCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCACGCGCGAGTTGTCTTCGAGGTaGGCGCTCCTCCAGGAAAGC +
Preference number: 3 (lower is better)
Translates to: PGSPRHLPLSLPVPRRTRELSSR*ALLQES
Trigger: GCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTC...GCGCGTGCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR GCA 72 bp CCCGGCGCACGCGCAAGAGGCGCAAAAGGCACAGCTTaGTGGGCGGCCGCACGCATGCGCACAAGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: PGARARGAKGTA*WAAARMRTSSR
Trigger: TCTGCTGCTTGTGCGCATGCGTGCGGCCGCCCAGCAAGCTGTGCCTTTTGCGCCTCTTGCGCGTGCGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR CCA 72 bp GGCGCACGCGCAAGAGGCGCAAAAGGCACAGCTTGCTaGGCGGCCGCACGCATGCGCACAAGCAGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: GARARGAKGTAC*AAARMRTSSRG
Trigger: CCCTCTGCTGCTTGTGCGCATGCGTGCGGCCGCCCAGCAAGCTGTGCCTTTTGCGCCTCTTGCGCGTGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR-3UTR CAA 90 bp ACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCACGCGCAAGAGGCGCAAAAGCCGCCCAGTGCTGAGTaGTCTTCGAGGTTGGCGCTC +
Preference number: 3 (lower is better)
Translates to: TPPAVPPCAPAHAQEAQKPPSAE*SSRLAL
Trigger: GAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGG...CTTTTGCGCCTCTTGCGCGTGCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR TCA 72 bp AGTCGCTGCCTAGGATGGCCAGCTGGTCCCTGGCGATaGGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGG +
Preference number: 3 (lower is better)
Translates to: SRCLGWPAGPWR*AVAGRRGHRAR
Trigger: CCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGCCAGGGACCAGCTGGCCATCCTAGGCAGCGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR CAA 90 bp ACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCACGCGCAAGAGGCGCAAAAGGAGTTGTCTTCGAGGTaGGCGCTCCTCCAGGAAAGC +
Preference number: 3 (lower is better)
Translates to: TPPAVPPCAPAHAQEAQKELSSR*ALLQES
Trigger: GCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTC...CTTTTGCGCCTCTTGCGCGTGCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR-3UTR CAA 90 bp GGCCTAGACGTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGGAGGGGGTCAGAGTCTaGGCATCAGTGTGGGGTGGG +
Preference number: 3 (lower is better)
Translates to: GLDVWLMNVAHGQQLTGGEGVRV*ASVWGG
Trigger: CCCACCCCACACTGATGCCAAGACTCTGACCCCCTC...CCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACACGTCTAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR GCA 72 bp GGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTTGCTaGAGCAGACGAAACATGGAGCCGTCCCAGCGCATG +
Preference number: 3 (lower is better)
Translates to: GWKTWAPREGSC*SRRNMEPSQRM
Trigger: CATGCGCTGGGACGGCTCCATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR GCA 72 bp AGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTTaGTGCAGCAGACGAAACATGGAGCCGTCCCAGCGC +
Preference number: 3 (lower is better)
Translates to: SGWKTWAPREGS*CSRRNMEPSQR
Trigger: GCGCTGGGACGGCTCCATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR CCA 72 bp AGCTGGTCCCTGGCGATGAGCAGTGGCTGGAAGACGTaGGCACCGCGCGAGGGAAGTTGCTGCAGCAGACGA +
Preference number: 3 (lower is better)
Translates to: SWSLAMSSGWKT*APREGSCCSRR
Trigger: TCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGCCAGGGACCAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR CCA 72 bp TCCAGGAGCCCCTTGTCAGGCTCAAGGCGGAGGACCTaGCTGAAGGCGAAGTCGCTGCCTAGGATGGCCAGC +
Preference number: 3 (lower is better)
Translates to: SRSPLSGSRRRT*LKAKSLPRMAS
Trigger: GCTGGCCATCCTAGGCAGCGACTTCGCCTTCAGCCAGGTCCTCCGCCTTGAGCCTGACAAGGGGCTCCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR CAA 90 bp AGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCCCCGGAGTCAGCCAGCCTaGAGGGGGTCAGAGTCTTGG +
Preference number: 3 (lower is better)
Translates to: SSARDLHLDSMQCTSLHPRSQPA*RGSESW
Trigger: CCAAGACTCTGACCCCCTCAAGGCTGGCTGACTCCG...GGGGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR CAA 90 bp AGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTTGCTGCAGCAGACGAGGGCCGTGGAACAGCTaGGAAGCAGAAGCCTGTCGG +
Preference number: 3 (lower is better)
Translates to: SSGWKTWAPREGSCCSRRGPWNS*EAEACR
Trigger: CCGACAGGCTTCTGCTTCCAAGCTGTTCCACGGCCC...TCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR CCA 72 bp TGGCTGAAGGCGAAGTCGCTGCCTAGGATGGCCAGCTaGTCCCTGGCGATGAGCAGTGGCTGGAAGACGTGG +
Preference number: 3 (lower is better)
Translates to: WLKAKSLPRMAS*SLAMSSGWKTW
Trigger: CCACGTCTTCCAGCCACTGCTCATCGCCAGGGACCAGCTGGCCATCCTAGGCAGCGACTTCGCCTTCAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR CAA 90 bp TTGCTGGGCGGCCGCACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCCTCCAGGAAAGCGATaGGCTGCGTGGAGTTTAGAA +
Preference number: 3 (lower is better)
Translates to: LLGGRTHAHKQQRGTRPVPPGKR*AAWSLE
Trigger: TTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGG...CACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTGCGGCCGCCCAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR CCA 72 bp AGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTaGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAG +
Preference number: 3 (lower is better)
Translates to: RGTRPVLSCLRG*RSSRKAIGCVE
Trigger: CTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CAA 90 bp GGGGCCCCAGCCATGCCCAGAGTCCCGTTGGTGGTCTCAGGCACTGAGGTCGATCCTCCAGGAAAGCGATaGGCTGCGTGGAGTTTAGAA +
Preference number: 3 (lower is better)
Translates to: GAPAMPRVPLVVSGTEVDPPGKR*AAWSLE
Trigger: TTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGG...ATCGACCTCAGTGCCTGAGACCACCAACGGGACTCTGGGCATGGCTGGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CAA 90 bp ACCTCATGGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCACCCTAGCATCAGCCTaGGGGGCTCAGTGTCAGGGT +
Preference number: 3 (lower is better)
Translates to: TSWSSARDLHLDSMQCTSTLASA*GAQCQG
Trigger: ACCCTGACACTGAGCCCCCAAGGCTGATGCTAGGGT...GCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCCATGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR TCA 72 bp ATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTaGGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAG +
Preference number: 3 (lower is better)
Translates to: MRTSSRGEPAQC*VVFEVGAPPGK
Trigger: CTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR TCA 72 bp CTGCTCCCCCAGTCTGTTCCCCACCCAGAGACCTTGTaGACACCTGAGTCAGATCAGGGCCCTTCCAGACTC +
Preference number: 3 (lower is better)
Translates to: LLPQSVPHPETL*TPESDQGPSRL
Trigger: GAGTCTGGAAGGGCCCTGATCTGACTCAGGTGTTCACAAGGTCTCTGGGTGGGGAACAGACTGGGGGAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR GCA 72 bp CCCCTGCCTGCACCTCACTCCAGAAACAGTGGGCAGTaGTTAACCCTAGCATCAGCCTTGGGGGCTCAGTGT +
Preference number: 3 (lower is better)
Translates to: PLPAPHSRNSGQ*LTLASALGAQC
Trigger: ACACTGAGCCCCCAAGGCTGATGCTAGGGTTAAGCACTGCCCACTGTTTCTGGAGTGAGGTGCAGGCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR CAA 90 bp ACCTCATGGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCCTCCAGGAAAGCGATaGGCTGCGTGGAGTTTAGAA +
Preference number: 3 (lower is better)
Translates to: TSWSSARDLHLDSMQCTSPPGKR*AAWSLE
Trigger: TTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGG...GCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCCATGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR-3UTR CAA 90 bp GAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGCACAGCGCATTTATaGAGCTCGGACTCGTCTTGT +
Preference number: 3 (lower is better)
Translates to: ECHQPLGAFRGTSGVGAGCTAHL*SSDSSC
Trigger: ACAAGACGAGTCCGAGCTCAATAAATGCGCTGTGCA...ACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR-3UTR CAA 90 bp TTATTGAGCTCGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGAAGGGCAATGCCCAGAGTCCCGTaGGTGGTCTCAGGCACTGAG +
Preference number: 3 (lower is better)
Translates to: LLSSDSSCPCLRRPSRRAMPRVP*VVSGTE
Trigger: CTCAGTGCCTGAGACCACCAACGGGACTCTGGGCAT...TGCCCTTCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392225.7
3UTR-3UTR CAA 90 bp GAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAAATGCCCAGAGTCCCGTaGGTGGTCTCAGGCACTGAG +
Preference number: 3 (lower is better)
Translates to: EVGAPPGKRLAAWSLEWEMPRVP*VVSGTE
Trigger: CTCAGTGCCTGAGACCACCAACGGGACTCTGGGCAT...TTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
3UTR TCA 72 bp AGCCATGCCCAGAGTCCCGTTGGTGGTCTCAGGCACTaGGGTCGATCTCGTGATGCTGGTAGATCTGTGTGG +
Preference number: 3 (lower is better)
Translates to: SHAQSPVGGLRH*GRSRDAGRSVW
Trigger: CCACACAGATCTACCAGCATCACGAGATCGACCTCAGTGCCTGAGACCACCAACGGGACTCTGGGCATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
3UTR GCA 72 bp ACAGCGCATTTATTGAGCTCGGACTCGTCTTGTCCTTaGCTCCGTCGCCCATCTAGAAGGGCACCAGGCTCC +
Preference number: 3 (lower is better)
Translates to: TAHLLSSDSSCP*LRRPSRRAPGS
Trigger: GGAGCCTGGTGCCCTTCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAAATGCGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR TCA 72 bp CCAGTCTGTTCCCCACCCAGAGACCTTGTGAACACCTaGGTCAGATCAGGGCCCTTCCAGACTCAGAACCCT +
Preference number: 3 (lower is better)
Translates to: PVCSPPRDLVNT*VRSGPFQTQNP
Trigger: AGGGTTCTGAGTCTGGAAGGGCCCTGATCTGACTCAGGTGTTCACAAGGTCTCTGGGTGGGGAACAGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR GCA 72 bp CATAAAAGTCACCACCCACCTGTTCGGCCACACACATaGAGTTGTTCTGAGCCCTTCCCTTGCCCTCACGCC +
Preference number: 3 (lower is better)
Translates to: HKSHHPPVRPHT*SCSEPFPCPHA
Trigger: GGCGTGAGGGCAAGGGAAGGGCTCAGAACAACTGCATGTGTGTGGCCGAACAGGTGGGTGGTGACTTTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR GCA 72 bp GCGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATaGCATCAACCCCTCGGTGCTTTCAGAGGGACCAGC +
Preference number: 3 (lower is better)
Translates to: AIGCVEFRMGKE*HQPLGAFRGTS
Trigger: GCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR CCA 72 bp GAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTaGAGTTTAGAATGGGAAAGGAATGCCATCAACCCC +
Preference number: 3 (lower is better)
Translates to: EVGAPPGKRLAA*SLEWERNAINP
Trigger: GGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR TCA 72 bp CTCCTGTCCCAGGCCCGGCGCCAAATGCCGAACACGTaGAGATGTATCATTGAATTCCCATGGCACTCCTAT +
Preference number: 3 (lower is better)
Translates to: LLSQARRQMPNT*RCIIEFPWHSY
Trigger: ATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGGCCTGGGACAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
3UTR-3UTR CAA 90 bp CCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCGGTAGAATCAGGATGTaGGGGCCAGCATCAGTGTCG +
Preference number: 3 (lower is better)
Translates to: PPGKRLAAWSLEWERNAIGRIRM*GPASVS
Trigger: CGACACTGATGCTGGCCCCAACATCCTGATTCTACC...GATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR-3UTR CAA 90 bp TTGGTGGTCTCAGGCACTGAGGTCGATCTCGTGATGCTGGTAGATCTGTGTGGGTCACAGAGCCAGCATTaGGGGGTAGAATCAGGATGT +
Preference number: 3 (lower is better)
Translates to: LVVSGTEVDLVMLVDLCGSQSQH*GVESGC
Trigger: ACATCCTGATTCTACCCCCAAATGCTGGCTCTGTGA...CCCACACAGATCTACCAGCATCACGAGATCGACCTCAGTGCCTGAGACCACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR GCA 72 bp CTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTaGGTGGAGTTTAGAATGGGAAAGGAATGCCATCAA +
Preference number: 3 (lower is better)
Translates to: LRGWRSSRKAIG*VEFRMGKECHQ
Trigger: TTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR CCA 72 bp CCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATaGGAAAGGAATGCCATCAACCCCTCGGTGCTTTCA +
Preference number: 3 (lower is better)
Translates to: PPGKRLAAWSLE*ERNAINPSVLS
Trigger: TGAAAGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR CCA 72 bp CCTTGCCCTCACGCCCCACACAGAAGCACTCAGCCATaGACTCTGTCAGTTTCACCTTCTACAGTTGTACAT +
Preference number: 3 (lower is better)
Translates to: PCPHAPHRSTQP*TLSVSPSTVVH
Trigger: ATGTACAACTGTAGAAGGTGAAACTGACAGAGTCCATGGCTGAGTGCTTCTGTGTGGGGCGTGAGGGCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR TCA 72 bp CCGGCGCCAAATGCCGAACACGTGAAGATGTATCATTaGATTCCCATGGCACTCCTATATCACTGTTTATTA +
Preference number: 3 (lower is better)
Translates to: PAPNAEHVKMYH*IPMALLYHCLL
Trigger: TAATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp AGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCGGAGCTCGGCGTCATTaGGCCGCAGCAGCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: RAPGSPRHLPLSLPVPRRGARRH*AAAAAA
Trigger: CGCGGCGGCTGCTGCGGCCCAATGACGCCGAGCTCC...GCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp GAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGGGCGGCCGCACGCATaGGCACAAGCAGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: EGHQAPRDTSRCPSLCPGGRPHA*AQAAEG
Trigger: CCCCTCTGCTGCTTGTGCGCATGCGTGCGGCCGCCC...GCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp AGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCGGGCTCTACGCTCAGTaGCGACTCCCCCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: RAPGSPRHLPLSLPVPRRGLYAQ*RLPHRL
Trigger: CAGACGGTGGGGGAGTCGGCACTGAGCGTAGAGCCC...GCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR TCA 90 bp CAGCTTGCTGGGCGGCCGCACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCGGGTCGGAGAGAAGCTaGCGGGCAGGTCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QLAGRPHACAQAAEGNPPGSERS*RAGPGS
Trigger: GCTCCCCGGACCTGCCCGTCAGCTTCTCTCCGACCC...GGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTGCGGCCGCCCAGCAAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR TCA 90 bp CCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCACGCGCGAACCCGCCCAGTGCTaGGTTGTCTTCGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: PGSPRHLPLSLPVPRRTREPAQC*VVFEVG
Trigger: GCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTC...GCGCGTGCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp GGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCATCGAGGTGGTGGAGCTaGATGTGGCTCAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GHQAPRDTSRCPSLCPGASRWWS*MWLREA
Trigger: CGCCTCCCTGAGCCACATGCAGCTCCACCACCTCGA...TGCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp AGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCCCTCGGGGATGTCTGTaGGTCTCTCGAAGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: RAPGSPRHLPLSLPVPRRPRGCL*VSRSGH
Trigger: GTGGCCGCTTCGAGAGACGCACAGACATCCCCGAGG...GCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp ACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCGTCCAGCGCTGTCCCTCCCTGTaGCCCGGCGCACGCGCAAGA +
Preference number: 4 (lower is better)
Translates to: TGGPSPQVGPGASQGAVQRCPSL*PGARAR
Trigger: TCTTGCGCGTGCGCCGGGGCACAGGGAGGGACAGCG...CTGGACGGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp ACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCACGCGCAAGAGGCGCAAAAGCGGCCACCGGTCCAGTaGAAGAGCACGGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: TPPAVPPCAPAHAQEAQKRPPVQ*KSTGRW
Trigger: CCAGCGGCCCGTGCTCTTCCACTGGACCGGTGGCCG...CTTTTGCGCCTCTTGCGCGTGCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp GAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCAGTGGCTGGAAGACGTaGGCACCGCGCGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: EGHQAPRDTSRCPSLCPGSGWKT*APREGS
Trigger: ACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACT...GCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp GGGCGGCCGCACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGCCAGCACCAGTGGCTTaGAGGACACCACGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: GRPHACAQAAEGNPPSAEPAPVA*RTPRRP
Trigger: CGGCCTCCGTGGTGTCCTGCAAGCCACTGGTGCTGG...CTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTGCGGCCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp CAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCCAGGGGCCCCAGCCATaGCCAGAGTCCCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: QLTGGPSPQVGPGASQGAQGPQP*PESRWW
Trigger: CCACCAACGGGACTCTGGGCATGGCTGGGGCCCCTG...GGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCCCTCCATCCGCCTGCTaGCACGCTCGGCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QLTGGPSPQVGPGASQGAPPSAC*HARPWL
Trigger: AAGCCAGGGCCGAGCGTGCCAGCAGGCGGATGGAGG...GGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp AAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCCAGAGTCCCGTTGGTaGTCTCAGGCACTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: KGTRLPATPPAVPPCAPAPESRW*SQALRS
Trigger: CGACCTCAGTGCCTGAGACCACCAACGGGACTCTGG...CGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp CTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGCCGGCGAAGGGCTGTaGCAGCACAATGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LEGHQAPRDTSRCPSLCPAGEGL*QHNVRL
Trigger: GAGCCTCACATTGTGCTGGCACAGCCCTTCGCCGGC...GGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp GGCCGCACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCGCTGTCCCTCCCTGTaGCCCGGCGCACGCGCAAGA +
Preference number: 4 (lower is better)
Translates to: GRTHAHKQQRGTRPVLSCRCPSL*PGARAR
Trigger: TCTTGCGCGTGCGCCGGGGCACAGGGAGGGACAGCG...ACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp AGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGGGGACACTTTCCCTTTaGGGGTCTCCAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: RRAPGSPRHLPLSLPVPRGTLSL*GSPGHH
Trigger: GTGGTGGCCTGGAGACCCCCAAAGGGAAAGTGTCCC...CCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp TTGCTGGGCGGCCGCACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGTGGTGCTGCCCGCCTTaGAGGCATCGGCCACCACGA +
Preference number: 4 (lower is better)
Translates to: LLGGRTHAHKQQRGTRPVWCCPP*RHRPPR
Trigger: TCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCA...CACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTGCGGCCGCCCAGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp TCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGAGAGGGGAGGCCAGCAGCAGGTaGGGCCGGCCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: STPRCFQRDQRGRSGLRGEASSR*GRPSSS
Trigger: GGAGCTGGACGGCCGGCCCCACCTGCTGCTGGCCTC...CCCTCTCAACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGAGGCCAGCAGCAGGTaGGGCCGGCCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DERGPRSAAHRRAITPSREASSR*GRPSSS
Trigger: GGAGCTGGACGGCCGGCCCCACCTGCTGCTGGCCTC...CCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp AGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGTCAAGGCGGAGGACCTaGCTGAAGGCGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: RRAPGSPRHLPLSLPVPRSRRRT*LKAKSL
Trigger: CAGCGACTTCGCCTTCAGCCAGGTCCTCCGCCTTGA...CCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp TTGCTGGGCGGCCGCACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGAAAGGCACAGCTTGCTaGGCGGCCGCACGCATGCGC +
Preference number: 4 (lower is better)
Translates to: LLGGRTHAHKQQRGTRPVKGTAC*AAARMR
Trigger: GCGCATGCGTGCGGCCGCCCAGCAAGCTGTGCCTTT...CACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTGCGGCCGCCCAGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR TCA 90 bp ACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCACGCGCAAGAGGCGCAAAAGGCTGGTCCCTGGCGATaGGCAGTGGCTGGAAGACGT +
Preference number: 4 (lower is better)
Translates to: TPPAVPPCAPAHAQEAQKAGPWR*AVAGRR
Trigger: ACGTCTTCCAGCCACTGCTCATCGCCAGGGACCAGC...CTTTTGCGCCTCTTGCGCGTGCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR TCA 90 bp GTCCCTGGCGATGAGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTTGAGCCGTCCCAGCGCATaGCCTGTGGGGGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VPGDEQWLEDVGTARGKLSRPSA*PVGVWP
Trigger: TGGCCACACCCCCACAGGTCATGCGCTGGGACGGCT...CAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGCCAGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp CACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGCGCCCTCCATCCGCCTaGTGGCACGCTCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: HACAQAAEGNPPSAELSSRPPSA*WHARPW
Trigger: CCAGGGCCGAGCGTGCCAGCAGGCGGATGGAGGGCG...CGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp GCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCGCCCTCCATCCGCCTaGTGGCACGCTCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AQAAEGNPPSAELSSRLARPPSA*WHARPW
Trigger: CCAGGGCCGAGCGTGCCAGCAGGCGGATGGAGGGCG...CGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp CCATCTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGGCAGCAGCAGCAGAATaGCTGCCCCTCCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: PSRRAPGSPRHLPLSLPVAAAAE*LPLPCP
Trigger: GGGGCATGGGAGGGGCAGGCATTCTGCTGCTGCTGC...CACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp CCATCTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGACGGTGGGCATCCACTaGAGGAGCCAGAGGACGCGG +
Preference number: 4 (lower is better)
Translates to: PSRRAPGSPRHLPLSLPVTVGIH*RSQRTR
Trigger: CCGCGTCCTCTGGCTCCTGCAGTGGATGCCCACCGT...CACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp CAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCGCCGGCGAAGGGCTGTaGCAGCACAATGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QLTGGPSPQVGPGASQGAAGEGL*QHNVRL
Trigger: GAGCCTCACATTGTGCTGGCACAGCCCTTCGCCGGC...GGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp ATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGGCGTCCGTGTCCCGGTaGCAGGCGTGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: MNVAHGQQLTGGPSPQVGASVSR*QACRLW
Trigger: CCAGAGCCTGCACGCCTGGCACCGGGACACGGACGC...CCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp ACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCACGCGCAAGAGGCGCAAAAGCGCTGGCATTCACGGTaGGCATCCACTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TPPAVPPCAPAHAQEAQKRWHSR*ASTAGA
Trigger: GGCTCCTGCAGTGGATGCCCACCGTGAATGCCAGCG...CTTTTGCGCCTCTTGCGCGTGCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp CATCTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCTGGTGCTGCCCGCCTTaGAGGCATCGGCCACCACGA +
Preference number: 4 (lower is better)
Translates to: HLEGHQAPRDTSRCPSLCWCCPP*RHRPPR
Trigger: TCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCA...GCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp GGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCCGCGGCACAGCAGCGTaGTGCTGCCCGCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GALHVTSTSTPCSAPACTRGTAA*CCPPWR
Trigger: CCTCCAAGGCGGGCAGCACCACGCTGCTGTGCCGCG...GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGGAGGCCAGCAGCAGGTaGGGCCGGCCGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AHKQQRGTRPVLSCLRGWEASSR*GRPSSS
Trigger: GGAGCTGGACGGCCGGCCCCACCTGCTGCTGGCCTC...CCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp ACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCGTCCAGAGTGGCTGGAAGACGTaGGCACCGCGCGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: TGGPSPQVGPGASQGAVQSGWKT*APREGS
Trigger: ACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACT...CTGGACGGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp AAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGAGTTGTCTTCGAGGTTaGCGCTCCTCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: KGTRLPATPPAVPPCAPASCLRG*RSSRKA
Trigger: CGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACT...CGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp CAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCTCGGGGACTGGGGAGTaGTTCGGAGTCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QLTGGPSPQVGPGASQGASGTGE*FGVSQP
Trigger: AGGCTGGCTGACTCCGAACCACTCCCCAGTCCCCGA...GGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp GGAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTGGCCAGTGAGGGCCTaGGGTCCCGGGGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GMPSTPRCFQRDQRGRSGWPVRA*GPGGLW
Trigger: CCAGAGACCCCCGGGACCCCAGGCCCTCACTGGCCA...CCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR TCA 90 bp GGCGGCCGCACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTCCCCAATGTAGCGTGTaGGGCACAGGAACACGTCCC +
Preference number: 4 (lower is better)
Translates to: GGRTHAHKQQRGTRPVLSPQCSV*GTGTRP
Trigger: GGGACGTGTTCCTGTGCCTCACACGCTACATTGGGG...ACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTGCGGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp GTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAGGGCTCTACGCTCAGTaGCGACTCCCCCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: VADERGPRSAAHRRAITPGLYAQ*RLPHRL
Trigger: CAGACGGTGGGGGAGTCGGCACTGAGCGTAGAGCCC...TGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp GGCCTAGACGTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGACAGCAGCGTGGTGCTaGCCGCCTTGGAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: GLDVWLMNVAHGQQLTGGTAAWC*PPWRHR
Trigger: CCGATGCCTCCAAGGCGGGCAGCACCACGCTGCTGT...CCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACACGTCTAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp GCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGGCGTCCGTGTCCCGGTaGCAGGCGTGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AHKQQRGTRPVLSCLRGWASVSR*QACRLW
Trigger: CCAGAGCCTGCACGCCTGGCACCGGGACACGGACGC...CCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp GAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTGGAGGCCCCAGCTCCTaGAGTGGCTCCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: ECHQPLGAFRGTSGVGAGGGPSS*SGSRSP
Trigger: GGGGCTCCTGGAGCCACTGCAGGAGCTGGGGCCTCC...ACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp GATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGCAGGGGCCCCAGCCATaGCCAGAGTCCCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: DERGPRSAAHRRAITPSRQGPQP*PESRWW
Trigger: CCACCAACGGGACTCTGGGCATGGCTGGGGCCCCTG...CCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp GGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCCAGGGGCCCCAGCCATaGCCAGAGTCCCGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GALHVTSTSTPCSAPACTQGPQP*PESRWW
Trigger: CCACCAACGGGACTCTGGGCATGGCTGGGGCCCCTG...GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp CAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCTCTGAGCCCTTCCCTTaGCCTCACGCCCCACACAGA +
Preference number: 4 (lower is better)
Translates to: QLTGGPSPQVGPGASQGASEPFP*PHAPHR
Trigger: TCTGTGTGGGGCGTGAGGGCAAGGGAAGGGCTCAGA...GGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp CAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCGGCCACCGGTCCAGTaGAAGAGCACGGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QAAEGNPPSAELSSRLALRPPVQ*KSTGRW
Trigger: CCAGCGGCCCGTGCTCTTCCACTGGACCGGTGGCCG...GAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GGGGCCCCAGCCATGCCCAGAGTCCCGTTGGTGGTCTCAGGCACTGAGGTCGATGCGATGAGCAGTGGCTaGAAGACGTGGGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: GAPAMPRVPLVVSGTEVDAMSSG*KTWAPR
Trigger: GCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGC...ATCGACCTCAGTGCCTGAGACCACCAACGGGACTCTGGGCATGGCTGGGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GGCGGCCGCACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTCCTAGGATGGCCAGCTaGTCCCTGGCGATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GGRTHAHKQQRGTRPVLSPRMAS*SLAMSS
Trigger: ACTGCTCATCGCCAGGGACCAGCTGGCCATCCTAGG...ACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTGCGGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp ACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCGTCCAGCCTAGGATGGCCAGCTaGTCCCTGGCGATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: TGGPSPQVGPGASQGAVQPRMAS*SLAMSS
Trigger: ACTGCTCATCGCCAGGGACCAGCTGGCCATCCTAGG...CTGGACGGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCACGCGCAAGCGATTGGCTGCGTaGAGTTTAGAATGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PGSPRHLPLSLPVPRRTRKRLAA*SLEWER
Trigger: CCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTT...GCGCGTGCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp GGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCGGTCCCGGGGGTCTCTaGGGGCCGTGGAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: GALHVTSTSTPCSAPACTGPGGL*GPWNSL
Trigger: CAAGCTGTTCCACGGCCCCCAGAGACCCCCGGGACC...GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR TCA 90 bp ACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTCCCCCACCCCCACTCTaGGGCACCCGCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TRPVLSCLRGWRSSRKAIPPPPL*GTRFSR
Trigger: CCGGGAGAAGCGGGTGCCTCAGAGTGGGGGTGGGGG...AATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp ATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGGCAGCAGCAGCAGAATaGCTGCCCCTCCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: MNVAHGQQLTGGPSPQVGAAAAE*LPLPCP
Trigger: GGGGCATGGGAGGGGCAGGCATTCTGCTGCTGCTGC...CCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp AGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTTGCTGCAGCAGACGACCAGCACCAGTGGCTTaGAGGACACCACGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SSGWKTWAPREGSCCSRRPAPVA*RTPRRP
Trigger: CGGCCTCCGTGGTGTCCTGCAAGCCACTGGTGCTGG...TCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp ATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGACAGCAGCGTGGTGCTaGCCGCCTTGGAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: MNVAHGQQLTGGPSPQVGTAAWC*PPWRHR
Trigger: CCGATGCCTCCAAGGCGGGCAGCACCACGCTGCTGT...CCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCCTCCATCCGCCTGCTaGCACGCTCGGCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QAAEGNPPSAELSSRLALPPSAC*HARPWL
Trigger: AAGCCAGGGCCGAGCGTGCCAGCAGGCGGATGGAGG...GAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp CTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGGAGGGTCTCCAGATaGTTATTGGCCAGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: LEGHQAPRDTSRCPSLCPGRVSR*LLARLR
Trigger: CCTAAGCCTGGCCAATAACCATCTGGAGACCCTCCC...GGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp CAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCTGGTGGAGCTGCATGTaGCTCAGGGAGGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: QAAEGNPPSAELSSRLALWWSCM*LREAGP
Trigger: GGGCCCCGCCTCCCTGAGCCACATGCAGCTCCACCA...GAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp AAGGAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGCGCGGCACAGCAGCGTaGTGCTGCCCGCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KECHQPLGAFRGTSGVGARGTAA*CCPPWR
Trigger: CCTCCAAGGCGGGCAGCACCACGCTGCTGTGCCGCG...CGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAAGAGCACGGGCCGCTaGGAAGCCGAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HACAQAAEGNPPSAELSSKSTGR*EAEASS
Trigger: GCTGCTGGCCTCGGCTTCCCAGCGGCCCGTGCTCTT...CGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR TCA 90 bp GCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAGGGTCGGAGAGAAGCTaGCGGGCAGGTCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: AELSSRLALLQESDWLRGGSERS*RAGPGS
Trigger: GCTCCCCGGACCTGCCCGTCAGCTTCTCTCCGACCC...TCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR TCA 90 bp ATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGGGCGGAGGACCTGGCTaGAGGCGAAGTCGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: MPSTPRCFQRDQRGRSGLGGGPG*RRSRCL
Trigger: TAGGCAGCGACTTCGCCTTCAGCCAGGTCCTCCGCC...CAACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp CAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCCACATGCAGTTGTTCTaGGCCCTTCCCTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: QLTGGPSPQVGPGASQGAHMQLF*ALPLPS
Trigger: TGAGGGCAAGGGAAGGGCTCAGAACAACTGCATGTG...GGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp GAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTACGGTGGGCATCCACTaGAGGAGCCAGAGGACGCGG +
Preference number: 4 (lower is better)
Translates to: ECHQPLGAFRGTSGVGAGTVGIH*RSQRTR
Trigger: CCGCGTCCTCTGGCTCCTGCAGTGGATGCCCACCGT...ACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp TCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGAGAGGGCCTCGGGGATGTCTGTaGGTCTCTCGAAGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: STPRCFQRDQRGRSGLRGPRGCL*VSRSGH
Trigger: GTGGCCGCTTCGAGAGACGCACAGACATCCCCGAGG...CCCTCTCAACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCATGGCACGCTCGGCCCTaGCTTCTCTCTCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: VADERGPRSAAHRRAITPWHARP*LLSPLL
Trigger: GAGAAGAGGAGAGAGAAGCCAGGGCCGAGCGTGCCA...TGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp GAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTCTGCCGGCCTTCAGCTaGGTGACTCCCGTCCTGACG +
Preference number: 4 (lower is better)
Translates to: ECHQPLGAFRGTSGVGAGLPAFS*VTPVLT
Trigger: CGTCAGGACGGGAGTCACCCAGCTGAAGGCCGGCAG...ACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp CAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCACGCGGCAGTCACACTaGAACGGGTTCCCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: QAAEGNPPSAELSSRLALTRQSH*NGFPRR
Trigger: CCTCCGCGGGAACCCGTTCCAGTGTGACTGCCGCGT...GAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp ACACCTGAGTCAGATCAGGGCCCTTCCAGACTCAGAACCCTCCCCTGCCTGCACCGCCGGTCCCCACGCTaGCATTCACGGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: TPESDQGPSRLRTLPCLHRRSPR*HSRWAS
Trigger: GGATGCCCACCGTGAATGCCAGCGTGGGGACCGGCG...GTGCAGGCAGGGGAGGGTTCTGAGTCTGGAAGGGCCCTGATCTGACTCAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp ATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGTGGTGCTGCCCGCCTTaGAGGCATCGGCCACCACGA +
Preference number: 4 (lower is better)
Translates to: MPSTPRCFQRDQRGRSGLWCCPP*RHRPPR
Trigger: TCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCA...CAACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGACGGCCACCGGTCCAGTaGAAGAGCACGGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: AELSSRLALLQESDWLRGRPPVQ*KSTGRW
Trigger: CCAGCGGCCCGTGCTCTTCCACTGGACCGGTGGCCG...TCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CCATCTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCTGGAAGTGGCGTGTaGCATAGACATCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: PSRRAPGSPRHLPLSLPVPGSGV*HRHPRP
Trigger: AGGCCGAGGATGTCTATGCCACACGCCACTTCCAGG...CACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp GTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCTGCCCAGAGTCCCGTTaGTGGTCTCAGGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: VWLMNVAHGQQLTGGPSPCPESR*WSQALR
Trigger: CCTCAGTGCCTGAGACCACCAACGGGACTCTGGGCA...GGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp TCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGAGAGGGGGCTCCGGGACCTCATaGAGCTCTGCACGTGACCTC +
Preference number: 4 (lower is better)
Translates to: STPRCFQRDQRGRSGLRGGSGTS*SSARDL
Trigger: GAGGTCACGTGCAGAGCTCCATGAGGTCCCGGAGCC...CCCTCTCAACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp TCGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGAAGGGCACCAGGCTCCGCTGGTCCCTGGCGATaGGCAGTGGCTGGAAGACGT +
Preference number: 4 (lower is better)
Translates to: SDSSCPCLRRPSRRAPGSAGPWR*AVAGRR
Trigger: ACGTCTTCCAGCCACTGCTCATCGCCAGGGACCAGC...GGAGCCTGGTGCCCTTCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR TCA 90 bp CATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTGGCGGAGGACCTGGCTaGAGGCGAAGTCGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: HAHKQQRGTRPVLSCLRGGGGPG*RRSRCL
Trigger: TAGGCAGCGACTTCGCCTTCAGCCAGGTCCTCCGCC...ACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp CACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCTGCTGCCTGGTGTCTTaGTTTCTTGTCTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: HGQQLTGGPSPQVGPGASCCLVS*FLVSCP
Trigger: GGGGCAGGAGACAAGAAATCAAGACACCAGGCAGCA...GCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392225.7
CDS-3UTR GCA 90 bp GTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCATCGATGAAGAGGTACTaGAGGTGGGACAGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: VADERGPRSAAHRRAITPSMKRY*RWDRPA
Trigger: TGCGGGCCTGTCCCACCTGCAGTACCTCTTCATCGA...TGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp ACCTCATGGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCACGGTGGGCATCCACTaGAGGAGCCAGAGGACGCGG +
Preference number: 4 (lower is better)
Translates to: TSWSSARDLHLDSMQCTSTVGIH*RSQRTR
Trigger: CCGCGTCCTCTGGCTCCTGCAGTGGATGCCCACCGT...GCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCCATGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp CGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCCCAGCACCAGTGGCTTaGAGGACACCACGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: RPVLSCLRGWRSSRKAIGPAPVA*RTPRRP
Trigger: CGGCCTCCGTGGTGTCCTGCAAGCCACTGGTGCTGG...GCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp ACCTCATGGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCGGCACAGCAGCGTGGTaGTGCCCGCCTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TSWSSARDLHLDSMQCTSGTAAW*CPPWRH
Trigger: ATGCCTCCAAGGCGGGCAGCACCACGCTGCTGTGCC...GCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCCATGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp GCCGAGATGTCCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTGCGTCCGTGTCCCGGTaGCAGGCGTGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AEMSRCCFRPEGQLGRSSASVSR*QACRLW
Trigger: CCAGAGCCTGCACGCCTGGCACCGGGACACGGACGC...ACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGGACATCTCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp GCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCCTCGGGGATGTCTGTaGGTCTCTCGAAGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: AQAAEGNPPSAELSSRLAPRGCL*VSRSGH
Trigger: GTGGCCGCTTCGAGAGACGCACAGACATCCCCGAGG...CGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp CACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCGCGAGGGAAGTTGCTaGAGCAGACGAAACATGGAG +
Preference number: 4 (lower is better)
Translates to: HGQQLTGGPSPQVGPGASREGSC*SRRNME
Trigger: CTCCATGTTTCGTCTGCTGCAGCAACTTCCCTCGCG...GCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp GATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGTCCACCTCGACTCCATaGAGTGCACCAGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: DERGPRSAAHRRAITPSRSTSTP*SAPACT
Trigger: GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGA...CCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp CAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCGCAAAAGGCACAGCTTaGTGGGCGGCCGCACGCATG +
Preference number: 4 (lower is better)
Translates to: QAAEGNPPSAELSSRLALAKGTA*WAAARM
Trigger: CATGCGTGCGGCCGCCCAGCAAGCTGTGCCTTTTGC...GAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp CACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCAAGAGGTACTGCAGGTaGGACAGGCCCGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: HGQQLTGGPSPQVGPGASKRYCR*DRPANA
Trigger: TGCATTTGCGGGCCTGTCCCACCTGCAGTACCTCTT...GCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGCGCTGGCATTCACGGTaGGCATCCACTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: HACAQAAEGNPPSAELSSRWHSR*ASTAGA
Trigger: GGCTCCTGCAGTGGATGCCCACCGTGAATGCCAGCG...CGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp GGCTTAAGGCCTAGACGTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACCGGGCCCAGCACCAGTaGCTTGCAGGACACCACGGA +
Preference number: 4 (lower is better)
Translates to: GLRPRRVADERGPRSAAHRAQHQ*LAGHHG
Trigger: TCCGTGGTGTCCTGCAAGCCACTGGTGCTGGGCCCG...GTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACACGTCTAGGCCTTAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTCGGGCCCAGCACCAGTaGCTTGCAGGACACCACGGA +
Preference number: 4 (lower is better)
Translates to: HAHKQQRGTRPVLSCLRGRAQHQ*LAGHHG
Trigger: TCCGTGGTGTCCTGCAAGCCACTGGTGCTGGGCCCG...ACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp ATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGCCTGGCGATGAGCAGTaGCTGGAAGACGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: MPSTPRCFQRDQRGRSGLPGDEQ*LEDVGT
Trigger: GGTGCCCACGTCTTCCAGCCACTGCTCATCGCCAGG...CAACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTCCTGGCGATGAGCAGTaGCTGGAAGACGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: ECHQPLGAFRGTSGVGAGPGDEQ*LEDVGT
Trigger: GGTGCCCACGTCTTCCAGCCACTGCTCATCGCCAGG...ACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCCTGGCGATGAGCAGTaGCTGGAAGACGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: AHKQQRGTRPVLSCLRGWPGDEQ*LEDVGT
Trigger: GGTGCCCACGTCTTCCAGCCACTGCTCATCGCCAGG...CCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp AGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCCCCCTAGGATGGCCAGCTaGTCCCTGGCGATGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SSARDLHLDSMQCTSLHPPRMAS*SLAMSS
Trigger: ACTGCTCATCGCCAGGGACCAGCTGGCCATCCTAGG...GGGGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp ATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGTCAAGGCGGAGGACCTaGCTGAAGGCGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: MNVAHGQQLTGGPSPQVGSRRRT*LKAKSL
Trigger: CAGCGACTTCGCCTTCAGCCAGGTCCTCCGCCTTGA...CCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGGCCCAGCCTCACCATaGAGTCCCCAATGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: DERGPRSAAHRRAITPSRGPASP*SPQCSV
Trigger: CACGCTACATTGGGGACTCCATGGTGAGGCTGGGCC...CCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp GTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCTTCTCCCACCACCTCTaGCTGAACTCCATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: VWLMNVAHGQQLTGGPSPFSHHL*LNSIPS
Trigger: GGAGGGGATGGAGTTCAGCCAGAGGTGGTGGGAGAA...GGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR TCA 90 bp TGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAACCCCCACCCCCACTCTaGGGCACCCGCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: WRSSRKAIGCVEFRMGKEPPPPL*GTRFSR
Trigger: CCGGGAGAAGCGGGTGCCTCAGAGTGGGGGTGGGGG...TTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR TCA 90 bp GAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTCCCCAATGTAGCGTGTaGGGCACAGGAACACGTCCC +
Preference number: 4 (lower is better)
Translates to: ECHQPLGAFRGTSGVGAGPQCSV*GTGTRP
Trigger: GGGACGTGTTCCTGTGCCTCACACGCTACATTGGGG...ACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp AAGGAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGCTGGTCCCTGGCGATaGGCAGTGGCTGGAAGACGT +
Preference number: 4 (lower is better)
Translates to: KECHQPLGAFRGTSGVGAAGPWR*AVAGRR
Trigger: ACGTCTTCCAGCCACTGCTCATCGCCAGGGACCAGC...CGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp TCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGAGAGGGATGGAGCTCTGCACGTaGCCTCCACCTCGACTCCAT +
Preference number: 4 (lower is better)
Translates to: STPRCFQRDQRGRSGLRGMELCT*PPPRLH
Trigger: ATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCCAT...CCCTCTCAACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp GGGGCCCCAGCCATGCCCAGAGTCCCGTTGGTGGTCTCAGGCACTGAGGTCGATGACCTTGTGAACACCTaGGTCAGATCAGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GAPAMPRVPLVVSGTEVDDLVNT*VRSGPF
Trigger: GAAGGGCCCTGATCTGACTCAGGTGTTCACAAGGTC...ATCGACCTCAGTGCCTGAGACCACCAACGGGACTCTGGGCATGGCTGGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp CGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTCGAGGTGGTGGAGCTaGATGTGGCTCAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RPVLSCLRGWRSSRKAIGSRWWS*MWLREA
Trigger: CGCCTCCCTGAGCCACATGCAGCTCCACCACCTCGA...GCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp AGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACCCACAGCAGCGTGGTGCTaGCCGCCTTGGAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: RCCFRPEGQLGRSSRLGPTAAWC*PPWRHR
Trigger: CCGATGCCTCCAAGGCGGGCAGCACCACGCTGCTGT...GGGTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp CCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACGGCACAGCAGCGTGGTaGTGCCCGCCTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PDVALDLKGSSGGPVGWDGTAAW*CPPWRH
Trigger: ATGCCTCCAAGGCGGGCAGCACCACGCTGCTGTGCC...GTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp GATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGCCGCGCGAGGGAAGTTaGTGCAGCAGACGAAACATG +
Preference number: 4 (lower is better)
Translates to: DERGPRSAAHRRAITPSRPREGS*CSRRNM
Trigger: CATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGG...CCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp CGTCGCCCATCTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCAGAATGGGAAAGGAATaGCATCAACCCCTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: RRPSRRAPGSPRHLPLSLRMGKE*HQPLGA
Trigger: AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCT...GAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAGATGGGCGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp AAGGAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGCTAGGCTCCTCTCCCTaGTCCCCCAGTCTGTTCCCC +
Preference number: 4 (lower is better)
Translates to: KECHQPLGAFRGTSGVGALGSSP*SPSLFP
Trigger: GGGGAACAGACTGGGGGAGCAGGGAGAGGAGCCTAG...CGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp GTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCTCGGAACAGGAATCTaGGGAGGGTCTCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: VWLMNVAHGQQLTGGPSPLGTGI*GGSPDG
Trigger: ACCATCTGGAGACCCTCCCCAGATTCCTGTTCCGAG...GGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp ACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTACGCGGCAGTCACACTaGAACGGGTTCCCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: TRPVLSCLRGWRSSRKAITRQSH*NGFPRR
Trigger: CCTCCGCGGGAACCCGTTCCAGTGTGACTGCCGCGT...AATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCCGCTGGCATTCACGGTaGGCATCCACTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RPVLSCLRGWRSSRKAIGRWHSR*ASTAGA
Trigger: GGCTCCTGCAGTGGATGCCCACCGTGAATGCCAGCG...GCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GGGCCCTTAAAGCAAGCAGCAAAGAGGAAGCGTCTGCCGGCCATAGTGATGTGGTGGTGGAGCTGCATGTaGCTCAGGGAGGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GPLKQAAKRKRLPAIVMWWWSCM*LREAGP
Trigger: GGGCCCCGCCTCCCTGAGCCACATGCAGCTCCACCA...CCACATCACTATGGCCGGCAGACGCTTCCTCTTTGCTGCTTGCTTTAAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp AGTTGTTCTGAGCCCTTCCCTTGCCCTCACGCCCCACACAGAAGCACTCAGCCACGGGCCCAGCACCAGTaGCTTGCAGGACACCACGGA +
Preference number: 4 (lower is better)
Translates to: SCSEPFPCPHAPHRSTQPRAQHQ*LAGHHG
Trigger: TCCGTGGTGTCCTGCAAGCCACTGGTGCTGGGCCCG...TGGCTGAGTGCTTCTGTGTGGGGCGTGAGGGCAAGGGAAGGGCTCAGAACAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp CATTTATTGAGCTCGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGAAGGGGAGCTCGGCGTCATTaGGCCGCAGCAGCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: HLLSSDSSCPCLRRPSRRGARRH*AAAAAA
Trigger: CGCGGCGGCTGCTGCGGCCCAATGACGCCGAGCTCC...CCTTCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp CGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGGGAGCTCGGCGTCATTaGGCCGCAGCAGCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: RLAAWSLEWERNAINPSVGARRH*AAAAAA
Trigger: CGCGGCGGCTGCTGCGGCCCAATGACGCCGAGCTCC...CACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GCCGAGATGTCCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAAGAGCACGGGCCGCTaGGAAGCCGAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AEMSRCCFRPEGQLGRSSKSTGR*EAEASS
Trigger: GCTGCTGGCCTCGGCTTCCCAGCGGCCCGTGCTCTT...ACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGGACATCTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGTGCCCAGAGTCCCGTTaGTGGTCTCAGGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: HACAQAAEGNPPSAELSSCPESR*WSQALR
Trigger: CCTCAGTGCCTGAGACCACCAACGGGACTCTGGGCA...CGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
3UTR CAA 72 bp GAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTaGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: EGNPPSAELSSR*ALLQESDWLRG
Trigger: TCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp CCCGGCGCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCCCCCACCCCCACTCTaGGGCACCCGCTTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PGAKCRTREDVSLNSHGTPPPPL*GTRFSR
Trigger: CCGGGAGAAGCGGGTGCCTCAGAGTGGGGGTGGGGG...AGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR TCA 90 bp AGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACCCCCGCGGAGGTCCACATaGGTAAGGGTGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RCCFRPEGQLGRSSRLGPPRRST*VRVSRP
Trigger: AGGCCTGGACACCCTTACTCATGTGGACCTCCGCGG...GGGTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp GGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCCAGGTGTGGCTGTGGTaGAGTCTGGAATGCATCCGA +
Preference number: 4 (lower is better)
Translates to: GALHVTSTSTPCSAPACTQVWLW*SLECIR
Trigger: TCGGATGCATTCCAGACTTCACCACAGCCACACCTG...GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp GATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGGACAGGCCCGCAAATaGATCGTCCTCAATCACGGA +
Preference number: 4 (lower is better)
Translates to: DERGPRSAAHRRAITPSRGQARK*IVLNHG
Trigger: TCCGTGATTGAGGACGATGCATTTGCGGGCCTGTCC...CCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp ATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGTCGATGAAGAGGTACTaGAGGTGGGACAGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: MPSTPRCFQRDQRGRSGLSMKRY*RWDRPA
Trigger: TGCGGGCCTGTCCCACCTGCAGTACCTCTTCATCGA...CAACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp AGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACCCTCGAGGTGGTGGAGCTaGATGTGGCTCAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RCCFRPEGQLGRSSRLGPSRWWS*MWLREA
Trigger: CGCCTCCCTGAGCCACATGCAGCTCCACCACCTCGA...GGGTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp TGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAAGGAGGCCCCAGCTCCTaGAGTGGCTCCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: WRSSRKAIGCVEFRMGKEGGPSS*SGSRSP
Trigger: GGGGCTCCTGGAGCCACTGCAGGAGCTGGGGCCTCC...TTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp CGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCCCATCAACCCCTCGGTaGTTTCAGAGGGACCAGCGG +
Preference number: 4 (lower is better)
Translates to: RPVLSCLRGWRSSRKAIGPSTPR*FQRDQR
Trigger: CCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGG...GCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGTGGCACGCTCGGCCCTaGCTTCTCTCTCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PPSAELSSRLALLQESDWWHARP*LLSPLL
Trigger: GAGAAGAGGAGAGAGAAGCCAGGGCCGAGCGTGCCA...CCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp GATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGAAGAGGTACTGCAGGTaGGACAGGCCCGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: DERGPRSAAHRRAITPSRKRYCR*DRPANA
Trigger: TGCATTTGCGGGCCTGTCCCACCTGCAGTACCTCTT...CCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCGGGAGGGTCTCCAGATaGTTATTGGCCAGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: GALHVTSTSTPCSAPACTGRVSR*LLARLR
Trigger: CCTAAGCCTGGCCAATAACCATCTGGAGACCCTCCC...GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GGAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGCTCGGAACAGGAATCTaGGGAGGGTCTCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: GMPSTPRCFQRDQRGRSGLGTGI*GGSPDG
Trigger: ACCATCTGGAGACCCTCCCCAGATTCCTGTTCCGAG...CCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCCTCGGAACAGGAATCTaGGGAGGGTCTCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: GALHVTSTSTPCSAPACTLGTGI*GGSPDG
Trigger: ACCATCTGGAGACCCTCCCCAGATTCCTGTTCCGAG...GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GCGCATTTATTGAGCTCGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGACGCCGGTCCCCACGCTaGCATTCACGGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: AHLLSSDSSCPCLRRPSRRRSPR*HSRWAS
Trigger: GGATGCCCACCGTGAATGCCAGCGTGGGGACCGGCG...TCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAAATGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp CATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTGTCTTGGGGTCGAGGTaGTGGAGCTGCATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: HAHKQQRGTRPVLSCLRGVLGSR*WSCMWL
Trigger: GAGCCACATGCAGCTCCACCACCTCGACCCCAAGAC...ACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CAGGTTGCCTTTGATGGGGAATCTGCCCCAGCCGAGATGTCCAGATGTTGCTTTCGCGGCACAGCAGCGTaGTGCTGCCCGCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QVAFDGESAPAEMSRCCFRGTAA*CCPPWR
Trigger: CCTCCAAGGCGGGCAGCACCACGCTGCTGTGCCGCG...AAAGCAACATCTGGACATCTCGGCTGGGGCAGATTCCCCATCAAAGGCAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp AGGGTGCACAGCGCATTTATTGAGCTCGGACTCGTCTTGTCCTTGCCTCCGTCGGCGATGAGCAGTGGCTaGAAGACGTGGGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: RVHSAFIELGLVLSLPPSAMSSG*KTWAPR
Trigger: GCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGC...CGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAAATGCGCTGTGCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp GGCTTAAGGCCTAGACGTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACCCAGAGTCCCGTTGGTaGTCTCAGGCACTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: GLRPRRVADERGPRSAAHPESRW*SQALRS
Trigger: CGACCTCAGTGCCTGAGACCACCAACGGGACTCTGG...GTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACACGTCTAGGCCTTAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp ATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGAGTTGTCTTCGAGGTTaGCGCTCCTCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: MNVAHGQQLTGGPSPQVGSCLRG*RSSRKA
Trigger: CGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACT...CCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GCCGAGATGTCCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAAAGGCACAGCTTGCTaGGCGGCCGCACGCATGCGC +
Preference number: 4 (lower is better)
Translates to: AEMSRCCFRPEGQLGRSSKGTAC*AAARMR
Trigger: GCGCATGCGTGCGGCCGCCCAGCAAGCTGTGCCTTT...ACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGGACATCTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp AGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCCCGTCTTGGCATCAGTGTaGGGTGGGGTCCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: SSARDLHLDSMQCTSLHPVLASV*GGVLVQ
Trigger: TTGAACCAGGACCCCACCCCACACTGATGCCAAGAC...GGGGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp GTCCCTGGCGATGAGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTTGGGCTGTGGTGAAGTCTaGAATGCATCCGAGTCACAG +
Preference number: 4 (lower is better)
Translates to: VPGDEQWLEDVGTARGKLGCGEV*NASESQ
Trigger: CTGTGACTCGGATGCATTCCAGACTTCACCACAGCC...CAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGCCAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR CAA 72 bp GCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTaGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGAT +
Preference number: 4 (lower is better)
Translates to: AQAAEGNPPSAE*SSRLALLQESD
Trigger: ATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp AGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACCCCCCCAATGTAGCGTGTaGGGCACAGGAACACGTCCC +
Preference number: 4 (lower is better)
Translates to: RCCFRPEGQLGRSSRLGPPQCSV*GTGTRP
Trigger: GGGACGTGTTCCTGTGCCTCACACGCTACATTGGGG...GGGTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp GATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCACAGCGCATTTATTaGGCTCGGACTCGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: DERGPRSAAHRRAITPSRAQRIY*ARTRLV
Trigger: GACAAGACGAGTCCGAGCTCAATAAATGCGCTGTGC...CCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR TCA 90 bp TGGGGGCCGTGGAACAGCTTGGAAGCAGAAGCCTGTCGGTCCCAAAACTCCCATAACTCCATCCCCTCCTaGCTGGACCATCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: WGPWNSLEAEACRSQNSHNSIPS*LDHPGS
Trigger: GCTGCCAGGATGGTCCAGTCAGGAGGGGATGGAGTT...ATGGGAGTTTTGGGACCGACAGGCTTCTGCTTCCAAGCTGTTCCACGGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp CCCTTAAAGCAAGCAGCAAAGAGGAAGCGTCTGCCGGCCATAGTGATGTGGGCAGGCACAGCAGCGTGGTaGTGCCCGCCTTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PLKQAAKRKRLPAIVMWAGTAAW*CPPWRH
Trigger: ATGCCTCCAAGGCGGGCAGCACCACGCTGCTGTGCC...TGCCCACATCACTATGGCCGGCAGACGCTTCCTCTTTGCTGCTTGCTTTAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp ACCTCATGGAGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCCGCGCGAGGGAAGTTaGTGCAGCAGACGAAACATG +
Preference number: 4 (lower is better)
Translates to: TSWSSARDLHLDSMQCTSPREGS*CSRRNM
Trigger: CATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGG...GCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCCATGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp AGTTGTTCTGAGCCCTTCCCTTGCCCTCACGCCCCACACAGAAGCACTCAGCCACCATCAACCCCTCGGTaGTTTCAGAGGGACCAGCGG +
Preference number: 4 (lower is better)
Translates to: SCSEPFPCPHAPHRSTQPPSTPR*FQRDQR
Trigger: CCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGG...TGGCTGAGTGCTTCTGTGTGGGGCGTGAGGGCAAGGGAAGGGCTCAGAACAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp ATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGCTGGGCGGCCGCACGCATaGGCACAAGCAGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: IGCVEFRMGKECHQPLGAGRPHA*AQAAEG
Trigger: CCCCTCTGCTGCTTGTGCGCATGCGTGCGGCCGCCC...AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp GCCGAGATGTCCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTGCAAAAGGCACAGCTTaGTGGGCGGCCGCACGCATG +
Preference number: 4 (lower is better)
Translates to: AEMSRCCFRPEGQLGRSSAKGTA*WAAARM
Trigger: CATGCGTGCGGCCGCCCAGCAAGCTGTGCCTTTTGC...ACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGGACATCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp TTATTGAGCTCGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGAAGGGCACTGCCGGCCTTCAGCTaGGTGACTCCCGTCCTGACG +
Preference number: 4 (lower is better)
Translates to: LLSSDSSCPCLRRPSRRALPAFS*VTPVLT
Trigger: CGTCAGGACGGGAGTCACCCAGCTGAAGGCCGGCAG...TGCCCTTCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp CAGGTTGCCTTTGATGGGGAATCTGCCCCAGCCGAGATGTCCAGATGTTGCTTTCGCCGGTCCCCACGCTaGCATTCACGGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: QVAFDGESAPAEMSRCCFRRSPR*HSRWAS
Trigger: GGATGCCCACCGTGAATGCCAGCGTGGGGACCGGCG...AAAGCAACATCTGGACATCTCGGCTGGGGCAGATTCCCCATCAAAGGCAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CAGGTTGCCTTTGATGGGGAATCTGCCCCAGCCGAGATGTCCAGATGTTGCTTTAAGAGCACGGGCCGCTaGGAAGCCGAGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QVAFDGESAPAEMSRCCFKSTGR*EAEASS
Trigger: GCTGCTGGCCTCGGCTTCCCAGCGGCCCGTGCTCTT...AAAGCAACATCTGGACATCTCGGCTGGGGCAGATTCCCCATCAAAGGCAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp AGATGTCCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCGCGATGAGCAGTGGCTaGAAGACGTGGGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: RCPDVALDLKGSSGGPVGAMSSG*KTWAPR
Trigger: GCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGC...GCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGGACATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp TCGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGAAGGGCACCAGGCTCCAGTTGTCTTCGAGGTTaGCGCTCCTCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: SDSSCPCLRRPSRRAPGSSCLRG*RSSRKA
Trigger: CGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACT...GGAGCCTGGTGCCCTTCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp GTGGTTCGGAGTCAGCCAGCCTTGAGGGGGTCAGAGTCTTGGCATCAGTGTGGGTGTGGGGTGGGGTCCTaGTTCAAAGGTCGGCATGTG +
Preference number: 4 (lower is better)
Translates to: VVRSQPALRGSESWHQCGCGVGS*FKGRHV
Trigger: CACATGCCGACCTTTGAACCAGGACCCCACCCCACA...CCCACACTGATGCCAAGACTCTGACCCCCTCAAGGCTGGCTGACTCCGAACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp CATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTGGCATCAGTGTGGGGTaGGGTCCTGGTTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: HAHKQQRGTRPVLSCLRGGISVG*GPGSKV
Trigger: GACCTTTGAACCAGGACCCCACCCCACACTGATGCC...ACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp GGGACAGGTGTGGCTGTGGTGAAGTCTGGAATGCATCCGAGTCACAGAGCCAGCAGGGGGTCAGAGTCTTaGCATCAGTGTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GTGVAVVKSGMHPSHRASRGSES*HQCGVG
Trigger: CCCCACCCCACACTGATGCCAAGACTCTGACCCCCT...GCTGGCTCTGTGACTCGGATGCATTCCAGACTTCACCACAGCCACACCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp GATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGTAGAATCAGGATGTTaGGGCCAGCATCAGTGTCGG +
Preference number: 4 (lower is better)
Translates to: DERGPRSAAHRRAITPSRVESGC*GQHQCR
Trigger: CCGACACTGATGCTGGCCCCAACATCCTGATTCTAC...CCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR TCA 90 bp TTGGTGGTCTCAGGCACTGAGGTCGATCTCGTGATGCTGGTAGATCTGTGTGGGCCGCGGAGGTCCACATaGGTAAGGGTGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LVVSGTEVDLVMLVDLCGPRRST*VRVSRP
Trigger: AGGCCTGGACACCCTTACTCATGTGGACCTCCGCGG...CCCACACAGATCTACCAGCATCACGAGATCGACCTCAGTGCCTGAGACCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp GAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTCTATGGCTCTGCACTTaGAAGTCTTGGGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: ECHQPLGAFRGTSGVGAGLWLCT*KSWGRG
Trigger: ACCTCGACCCCAAGACTTTCAAGTGCAGAGCCATAG...ACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp ACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGTGGTCTCAGGCACTaGGGTCGATCTCGTGATGCT +
Preference number: 4 (lower is better)
Translates to: TRPVLSCLRGWRSSRKAIGGLRH*GRSRDA
Trigger: AGCATCACGAGATCGACCTCAGTGCCTGAGACCACC...AATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp CCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACATGGAGCTCTGCACGTaGCCTCCACCTCGACTCCAT +
Preference number: 4 (lower is better)
Translates to: PDVALDLKGSSGGPVGWDMELCT*PPPRLH
Trigger: ATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCCAT...GTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp CGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCGGACAGGCCCGCAAATaGATCGTCCTCAATCACGGA +
Preference number: 4 (lower is better)
Translates to: RPVLSCLRGWRSSRKAIGGQARK*IVLNHG
Trigger: TCCGTGATTGAGGACGATGCATTTGCGGGCCTGTCC...GCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp AAGGAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGCGCGAGGGAAGTTGCTaGAGCAGACGAAACATGGAG +
Preference number: 4 (lower is better)
Translates to: KECHQPLGAFRGTSGVGAREGSC*SRRNME
Trigger: CTCCATGTTTCGTCTGCTGCAGCAACTTCCCTCGCG...CGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp GGCCGCACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTGAGATGTCCAGATGTTaGTTTAGACCTGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRTHAHKQQRGTRPVLSCEMSRC*FRPEGQ
Trigger: CTGCCCTTCAGGTCTAAAGCAACATCTGGACATCTC...ACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTGCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp GGGCCCTTAAAGCAAGCAGCAAAGAGGAAGCGTCTGCCGGCCATAGTGATGTGGTCCACCTCGACTCCATaGAGTGCACCAGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: GPLKQAAKRKRLPAIVMWSTSTP*SAPACT
Trigger: GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGA...CCACATCACTATGGCCGGCAGACGCTTCCTCTTTGCTGCTTGCTTTAAGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp AGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTTGCTGCAGCAGACGAAGAATGGGAAAGGAATaGCATCAACCCCTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: SSGWKTWAPREGSCCSRRRMGKE*HQPLGA
Trigger: AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCT...TCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp AGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCCCAGAAACAGTGGGCAGTaGTTAACCCTAGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: SSARDLHLDSMQCTSLHPRNSGQ*LTLASA
Trigger: GGCTGATGCTAGGGTTAAGCACTGCCCACTGTTTCT...GGGGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp GCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAGAACCCTCCCCTGCCTaGACCTCACTCCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: AELSSRLALLQESDWLRGEPSPA*TSLQKQ
Trigger: CTGTTTCTGGAGTGAGGTGCAGGCAGGGGAGGGTTC...TCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp GGGACAGGTGTGGCTGTGGTGAAGTCTGGAATGCATCCGAGTCACAGAGCCAGCCTCAGAACCCTCCCCTaGCTGCACCTCACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GTGVAVVKSGMHPSHRASLRTLP*LHLTPE
Trigger: TTCTGGAGTGAGGTGCAGGCAGGGGAGGGTTCTGAG...GCTGGCTCTGTGACTCGGATGCATTCCAGACTTCACCACAGCCACACCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp CGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGACGCGGCAGTCACACTaGAACGGGTTCCCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RLAAWSLEWERNAINPSVTRQSH*NGFPRR
Trigger: CCTCCGCGGGAACCCGTTCCAGTGTGACTGCCGCGT...CACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CCCGGCGCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCGCCGGTCCCCACGCTaGCATTCACGGTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: PGAKCRTREDVSLNSHGTRRSPR*HSRWAS
Trigger: GGATGCCCACCGTGAATGCCAGCGTGGGGACCGGCG...AGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp CCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCTGGTGGAGCTGCATGTaGCTCAGGGAGGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PPGKRLAAWSLEWERNAIWWSCM*LREAGP
Trigger: GGGCCCCGCCTCCCTGAGCCACATGCAGCTCCACCA...GATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp ACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGACTCCCCCACCGTCTaGAACCAGGACAGCTCTATG +
Preference number: 4 (lower is better)
Translates to: TRPVLSCLRGWRSSRKAIDSPTV*NQDSSM
Trigger: CATAGAGCTGTCCTGGTTCCAGACGGTGGGGGAGTC...AATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp AGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACCCGACTCCCCCACCGTCTaGAACCAGGACAGCTCTATG +
Preference number: 4 (lower is better)
Translates to: RCCFRPEGQLGRSSRLGPDSPTV*NQDSSM
Trigger: CATAGAGCTGTCCTGGTTCCAGACGGTGGGGGAGTC...GGGTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGACCTGGAAGTGGCGTGTaGCATAGACATCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: AELSSRLALLQESDWLRGPGSGV*HRHPRP
Trigger: AGGCCGAGGATGTCTATGCCACACGCCACTTCCAGG...TCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp AGACCTTGTGAACACCTGAGTCAGATCAGGGCCCTTCCAGACTCAGAACCCTCCAGTGGCTGGAAGACGTaGGCACCGCGCGAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RPCEHLSQIRALPDSEPSSGWKT*APREGS
Trigger: ACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACT...GGAGGGTTCTGAGTCTGGAAGGGCCCTGATCTGACTCAGGTGTTCACAAGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp GGCCTAGACGTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGAAGCGATTGGCTGCGTaGAGTTTAGAATGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GLDVWLMNVAHGQQLTGGKRLAA*SLEWER
Trigger: CCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTT...CCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACACGTCTAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp AGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACCCGGCCGTGGAACAGCTTaGAAGCAGAAGCCTGTCGGT +
Preference number: 4 (lower is better)
Translates to: RCCFRPEGQLGRSSRLGPGRGTA*KQKPVG
Trigger: ACCGACAGGCTTCTGCTTCCAAGCTGTTCCACGGCC...GGGTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR TCA 90 bp CCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCGGCGGAGGACCTGGCTaGAGGCGAAGTCGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: PPGKRLAAWSLEWERNAIGGGPG*RRSRCL
Trigger: TAGGCAGCGACTTCGCCTTCAGCCAGGTCCTCCGCC...GATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp CCCGGCGCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTACGGTGGGCATCCACTaGAGGAGCCAGAGGACGCGG +
Preference number: 4 (lower is better)
Translates to: PGAKCRTREDVSLNSHGTTVGIH*RSQRTR
Trigger: CCGCGTCCTCTGGCTCCTGCAGTGGATGCCCACCGT...AGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR GCA 90 bp ATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGCTGGGCTCTACGCTCAGTaGCGACTCCCCCACCGTCTG +
Preference number: 4 (lower is better)
Translates to: IGCVEFRMGKECHQPLGAGLYAQ*RLPHRL
Trigger: CAGACGGTGGGGGAGTCGGCACTGAGCGTAGAGCCC...AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp AGGGTGCACAGCGCATTTATTGAGCTCGGACTCGTCTTGTCCTTGCCTCCGTCGCCGCGCGAGGGAAGTTaGTGCAGCAGACGAAACATG +
Preference number: 4 (lower is better)
Translates to: RVHSAFIELGLVLSLPPSPREGS*CSRRNM
Trigger: CATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGG...CGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAAATGCGCTGTGCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp GCGCATTTATTGAGCTCGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGAGGGACACTTTCCCTTTaGGGGTCTCCAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: AHLLSSDSSCPCLRRPSRGTLSL*GSPGHH
Trigger: GTGGTGGCCTGGAGACCCCCAAAGGGAAAGTGTCCC...TCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAAATGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp CCCGGCGCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCTGCCGGCCTTCAGCTaGGTGACTCCCGTCCTGACG +
Preference number: 4 (lower is better)
Translates to: PGAKCRTREDVSLNSHGTLPAFS*VTPVLT
Trigger: CGTCAGGACGGGAGTCACCCAGCTGAAGGCCGGCAG...AGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp GGGACAGGTGTGGCTGTGGTGAAGTCTGGAATGCATCCGAGTCACAGAGCCAGCGGGAGGGTCTCCAGATaGTTATTGGCCAGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: GTGVAVVKSGMHPSHRASGRVSR*LLARLR
Trigger: CCTAAGCCTGGCCAATAACCATCTGGAGACCCTCCC...GCTGGCTCTGTGACTCGGATGCATTCCAGACTTCACCACAGCCACACCTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp CCCGGCGCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTACGCGGCAGTCACACTaGAACGGGTTCCCGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PGAKCRTREDVSLNSHGTTRQSH*NGFPRR
Trigger: CCTCCGCGGGAACCCGTTCCAGTGTGACTGCCGCGT...AGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp TTGGTGGTCTCAGGCACTGAGGTCGATCTCGTGATGCTGGTAGATCTGTGTGGGGTCTTGGGGTCGAGGTaGTGGAGCTGCATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LVVSGTEVDLVMLVDLCGVLGSR*WSCMWL
Trigger: GAGCCACATGCAGCTCCACCACCTCGACCCCAAGAC...CCCACACAGATCTACCAGCATCACGAGATCGACCTCAGTGCCTGAGACCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp ATCCGAGTCACAGAGCCAGCATTTGGGGGTAGAATCAGGATGTTGGGGCCAGCATCAAGGCGGAGGACCTaGCTGAAGGCGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: IRVTEPAFGGRIRMLGPASRRRT*LKAKSL
Trigger: CAGCGACTTCGCCTTCAGCCAGGTCCTCCGCCTTGA...TGCTGGCCCCAACATCCTGATTCTACCCCCAAATGCTGGCTCTGTGACTCGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp ATCCGAGTCACAGAGCCAGCATTTGGGGGTAGAATCAGGATGTTGGGGCCAGCATGCCCAGAGTCCCGTTaGTGGTCTCAGGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: IRVTEPAFGGRIRMLGPACPESR*WSQALR
Trigger: CCTCAGTGCCTGAGACCACCAACGGGACTCTGGGCA...TGCTGGCCCCAACATCCTGATTCTACCCCCAAATGCTGGCTCTGTGACTCGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp CGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGGGCTCCGGGACCTCATaGAGCTCTGCACGTGACCTC +
Preference number: 4 (lower is better)
Translates to: RLAAWSLEWERNAINPSVGSGTS*SSARDL
Trigger: GAGGTCACGTGCAGAGCTCCATGAGGTCCCGGAGCC...CACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GGCCTAGACGTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGGCGTGGAGTTTAGAATaGGAAAGGAATGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: GLDVWLMNVAHGQQLTGGAWSLE*ERNAIN
Trigger: GTTGATGGCATTCCTTTCCCATTCTAAACTCCACGC...CCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACACGTCTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp ATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGCTCCGCGGAGGTCCACATaGGTAAGGGTGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: IGCVEFRMGKECHQPLGAPRRST*VRVSRP
Trigger: AGGCCTGGACACCCTTACTCATGTGGACCTCCGCGG...AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp CCCGGCGCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCCGCGGAGGTCCACATaGGTAAGGGTGTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PGAKCRTREDVSLNSHGTPRRST*VRVSRP
Trigger: AGGCCTGGACACCCTTACTCATGTGGACCTCCGCGG...AGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR TCA 90 bp TTATTGAGCTCGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGAAGGGCAGGTGGTCTCAGGCACTaGGGTCGATCTCGTGATGCT +
Preference number: 4 (lower is better)
Translates to: LLSSDSSCPCLRRPSRRAGGLRH*GRSRDA
Trigger: AGCATCACGAGATCGACCTCAGTGCCTGAGACCACC...TGCCCTTCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR TCA 90 bp AGATGTCCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCATGGAGCTCTGCACGTaGCCTCCACCTCGACTCCAT +
Preference number: 4 (lower is better)
Translates to: RCPDVALDLKGSSGGPVGMELCT*PPPRLH
Trigger: ATGGAGTCGAGGTGGAGGTCACGTGCAGAGCTCCAT...GCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGGACATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp TGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAAGAACCCGCCCAGTGCTaGGTTGTCTTCGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: WRSSRKAIGCVEFRMGKEEPAQC*VVFEVG
Trigger: GCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTC...TTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp ACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGCACAGCGCATTTATTaGGCTCGGACTCGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: TRPVLSCLRGWRSSRKAIAQRIY*ARTRLV
Trigger: GACAAGACGAGTCCGAGCTCAATAAATGCGCTGTGC...AATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR GCA 90 bp ATGCTGGTAGATCTGTGTGGGGCCCTTAAAGCAAGCAGCAAAGAGGAAGCGTCTGCCGGCGAAGGGCTGTaGCAGCACAATGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: MLVDLCGALKASSKEEASAGEGL*QHNVRL
Trigger: GAGCCTCACATTGTGCTGGCACAGCCCTTCGCCGGC...AGACGCTTCCTCTTTGCTGCTTGCTTTAAGGGCCCCACACAGATCTACCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp ATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGGAGATGTCCAGATGTTaGTTTAGACCTGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: MPSTPRCFQRDQRGRSGLEMSRC*FRPEGQ
Trigger: CTGCCCTTCAGGTCTAAAGCAACATCTGGACATCTC...CAACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp CGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGTCCACCTCGACTCCATaGAGTGCACCAGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: RLAAWSLEWERNAINPSVSTSTP*SAPACT
Trigger: GGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGA...CACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp CAGGTTGCCTTTGATGGGGAATCTGCCCCAGCCGAGATGTCCAGATGTTGCTTTCCATCAACCCCTCGGTaGTTTCAGAGGGACCAGCGG +
Preference number: 4 (lower is better)
Translates to: QVAFDGESAPAEMSRCCFPSTPR*FQRDQR
Trigger: CCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGG...AAAGCAACATCTGGACATCTCGGCTGGGGCAGATTCCCCATCAAAGGCAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp GCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGAGGAAAGCGATTGGCTaGGTGGAGTTTAGAATGGGA +
Preference number: 4 (lower is better)
Translates to: AHKQQRGTRPVLSCLRGWRKAIG*VEFRMG
Trigger: TCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCT...CCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GCGCATTTATTGAGCTCGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGACCTGGAAGTGGCGTGTaGCATAGACATCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: AHLLSSDSSCPCLRRPSRPGSGV*HRHPRP
Trigger: AGGCCGAGGATGTCTATGCCACACGCCACTTCCAGG...TCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAAATGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp CATTTATTGAGCTCGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGAAGGCCAGAGTCCCGTTGGTaGTCTCAGGCACTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: HLLSSDSSCPCLRRPSRRPESRW*SQALRS
Trigger: CGACCTCAGTGCCTGAGACCACCAACGGGACTCTGG...CCTTCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp ATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGCTGGCTCCGGGACCTCATaGAGCTCTGCACGTGACCTC +
Preference number: 4 (lower is better)
Translates to: IGCVEFRMGKECHQPLGAGSGTS*SSARDL
Trigger: GAGGTCACGTGCAGAGCTCCATGAGGTCCCGGAGCC...AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp ATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGGCGTGGAGTTTAGAATaGGAAAGGAATGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: MNVAHGQQLTGGPSPQVGAWSLE*ERNAIN
Trigger: GTTGATGGCATTCCTTTCCCATTCTAAACTCCACGC...CCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CCCGGCGCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTGTGAGACGAGCCTCTTaGCCCTGGCAGCCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PGAKCRTREDVSLNSHGTVRRAS*PWQPFP
Trigger: GGGGAAAGGCTGCCAGGGCCAAGAGGCTCGTCTCAC...AGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp TTGGTGGTCTCAGGCACTGAGGTCGATCTCGTGATGCTGGTAGATCTGTGTGGGGGTCTCTGGGGGCCGTaGAACAGCTTGGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LVVSGTEVDLVMLVDLCGGLWGP*NSLEAE
Trigger: TTCTGCTTCCAAGCTGTTCCACGGCCCCCAGAGACC...CCCACACAGATCTACCAGCATCACGAGATCGACCTCAGTGCCTGAGACCACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp CGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGTCGATGAAGAGGTACTaGAGGTGGGACAGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RLAAWSLEWERNAINPSVSMKRY*RWDRPA
Trigger: TGCGGGCCTGTCCCACCTGCAGTACCTCTTCATCGA...CACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp CCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGAGGAAAGCGATTGGCTaGGTGGAGTTTAGAATGGGA +
Preference number: 4 (lower is better)
Translates to: PPSAELSSRLALLQESDWRKAIG*VEFRMG
Trigger: TCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCT...CCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CCCGGCGCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTGGGACACTTTCCCTTTaGGGGTCTCCAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PGAKCRTREDVSLNSHGTGTLSL*GSPGHH
Trigger: GTGGTGGCCTGGAGACCCCCAAAGGGAAAGTGTCCC...AGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp ATGCTGGTAGATCTGTGTGGGGCCCTTAAAGCAAGCAGCAAAGAGGAAGCGTCTGTCTTGGGGTCGAGGTaGTGGAGCTGCATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: MLVDLCGALKASSKEEASVLGSR*WSCMWL
Trigger: GAGCCACATGCAGCTCCACCACCTCGACCCCAAGAC...AGACGCTTCCTCTTTGCTGCTTGCTTTAAGGGCCCCACACAGATCTACCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CATTTATTGAGCTCGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGAAGGGACTCCCCCACCGTCTaGAACCAGGACAGCTCTATG +
Preference number: 4 (lower is better)
Translates to: HLLSSDSSCPCLRRPSRRDSPTV*NQDSSM
Trigger: CATAGAGCTGTCCTGGTTCCAGACGGTGGGGGAGTC...CCTTCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CCA 90 bp GGCTTAAGGCCTAGACGTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAAGCGATTGGCTGCGTaGAGTTTAGAATGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GLRPRRVADERGPRSAAHKRLAA*SLEWER
Trigger: CCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTT...GTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACACGTCTAGGCCTTAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp AGATGTCCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCCTATGGCTCTGCACTTaGAAGTCTTGGGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: RCPDVALDLKGSSGGPVGLWLCT*KSWGRG
Trigger: ACCTCGACCCCAAGACTTTCAAGTGCAGAGCCATAG...GCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGGACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp TTGGTGGTCTCAGGCACTGAGGTCGATCTCGTGATGCTGGTAGATCTGTGTGGGCTATGGCTCTGCACTTaGAAGTCTTGGGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: LVVSGTEVDLVMLVDLCGLWLCT*KSWGRG
Trigger: ACCTCGACCCCAAGACTTTCAAGTGCAGAGCCATAG...CCCACACAGATCTACCAGCATCACGAGATCGACCTCAGTGCCTGAGACCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392225.7
ENST00000587780.5
CDS-3UTR TCA 90 bp TTCACCTTCTACAGTTGTACATTTCTCCCACCACCTCTGGCTGAACTCCATCCCGAACCCGCCCAGTGCTaGGTTGTCTTCGAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: FTFYSCTFLPPPLAELHPEPAQC*VVFEVG
Trigger: GCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTC...GGGATGGAGTTCAGCCAGAGGTGGTGGGAGAAATGTACAACTGTAGAAGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp AGATGTATCATTGAATTCCCATGGCACTCCTATATCACTGTTTATTACCCCCACCGCCCTCCATCCGCCTaGTGGCACGCTCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RCIIEFPWHSYITVYYPHRPPSA*WHARPW
Trigger: CCAGGGCCGAGCGTGCCAGCAGGCGGATGGAGGGCG...GTGGGGGTAATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR GCA 90 bp TGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAACGCGAGGGAAGTTGCTaGAGCAGACGAAACATGGAG +
Preference number: 4 (lower is better)
Translates to: WRSSRKAIGCVEFRMGKEREGSC*SRRNME
Trigger: CTCCATGTTTCGTCTGCTGCAGCAACTTCCCTCGCG...TTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCCTATATGGTGGAGCTGCATGTaGCTCAGGGAGGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: AKCRTREDVSLNSHGTPIWWSCM*LREAGP
Trigger: GGGCCCCGCCTCCCTGAGCCACATGCAGCTCCACCA...TATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp ATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGCTATCAGTGTCGGGGACTaGGGAGTGGTTCGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: IGCVEFRMGKECHQPLGAISVGD*GVVRSQ
Trigger: CTGACTCCGAACCACTCCCCAGTCCCCGACACTGAT...AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp GGGACAGGTGTGGCTGTGGTGAAGTCTGGAATGCATCCGAGTCACAGAGCCAGCAGAAGCACTCAGCCATaGACTCTGTCAGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: GTGVAVVKSGMHPSHRASRSTQP*TLSVSP
Trigger: AGGTGAAACTGACAGAGTCCATGGCTGAGTGCTTCT...GCTGGCTCTGTGACTCGGATGCATTCCAGACTTCACCACAGCCACACCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
3UTR CAA 72 bp GTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATaGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCC +
Preference number: 4 (lower is better)
Translates to: VVFEVGAPPGKR*AAWSLEWERNA
Trigger: GGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
3UTR CAA 72 bp GAAGTCTGGAATGCATCCGAGTCACAGAGCCAGCATTaGGGGGTAGAATCAGGATGTTGGGGCCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: EVWNASESQSQH*GVESGCWGQHQ
Trigger: CTGATGCTGGCCCCAACATCCTGATTCTACCCCCAAATGCTGGCTCTGTGACTCGGATGCATTCCAGACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp ATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGCTAAGAGGTACTGCAGGTaGGACAGGCCCGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: IGCVEFRMGKECHQPLGAKRYCR*DRPANA
Trigger: TGCATTTGCGGGCCTGTCCCACCTGCAGTACCTCTT...AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp CCCGGCGCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCTCGGAACAGGAATCTaGGGAGGGTCTCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: PGAKCRTREDVSLNSHGTLGTGI*GGSPDG
Trigger: ACCATCTGGAGACCCTCCCCAGATTCCTGTTCCGAG...AGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR TCA 90 bp CCCGGCGCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCTATGGCTCTGCACTTaGAAGTCTTGGGGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: PGAKCRTREDVSLNSHGTLWLCT*KSWGRG
Trigger: ACCTCGACCCCAAGACTTTCAAGTGCAGAGCCATAG...AGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR TCA 90 bp TGGACTCTGTCAGTTTCACCTTCTACAGTTGTACATTTCTCCCACCACCTCTGGGGTGGTCTCAGGCACTaGGGTCGATCTCGTGATGCT +
Preference number: 4 (lower is better)
Translates to: WTLSVSPSTVVHFSHHLWGGLRH*GRSRDA
Trigger: AGCATCACGAGATCGACCTCAGTGCCTGAGACCACC...CCAGAGGTGGTGGGAGAAATGTACAACTGTAGAAGGTGAAACTGACAGAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp TGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAAAGAATGGGAAAGGAATaGCATCAACCCCTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: WRSSRKAIGCVEFRMGKERMGKE*HQPLGA
Trigger: AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCT...TTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR GCA 90 bp AGATGTCCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCAGGAAAGCGATTGGCTaGGTGGAGTTTAGAATGGGA +
Preference number: 4 (lower is better)
Translates to: RCPDVALDLKGSSGGPVGRKAIG*VEFRMG
Trigger: TCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCT...GCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGGACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCCTATACGCTGGCATTCACGGTaGGCATCCACTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AKCRTREDVSLNSHGTPIRWHSR*ASTAGA
Trigger: GGCTCCTGCAGTGGATGCCCACCGTGAATGCCAGCG...TATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR TCA 90 bp GAAGATGTATCATTGAATTCCCATGGCACTCCTATATCACTGTTTATTACCCCCTGGCAGGGCAGGGAGTaGGACGAGCCTCTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: EDVSLNSHGTPISLFITPWQGRE*DEPLGP
Trigger: AGGGCCAAGAGGCTCGTCTCACTCCCTGCCCTGCCA...GGGGGTAATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR GCA 90 bp CGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGGAGATGTCCAGATGTTaGTTTAGACCTGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RLAAWSLEWERNAINPSVEMSRC*FRPEGQ
Trigger: CTGCCCTTCAGGTCTAAAGCAACATCTGGACATCTC...CACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CCA 90 bp GCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCCTATAGTCTTGGGGTCGAGGTaGTGGAGCTGCATGTGGCTC +
Preference number: 4 (lower is better)
Translates to: AKCRTREDVSLNSHGTPIVLGSR*WSCMWL
Trigger: GAGCCACATGCAGCTCCACCACCTCGACCCCAAGAC...TATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp ATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGCTTCACTCCAGAAACAGTaGGCAGTGCTTAACCCTAGC +
Preference number: 4 (lower is better)
Translates to: IGCVEFRMGKECHQPLGASLQKQ*AVLNPS
Trigger: GCTAGGGTTAAGCACTGCCCACTGTTTCTGGAGTGA...AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp AGATGTATCATTGAATTCCCATGGCACTCCTATATCACTGTTTATTACCCCCACTCGAGGTGGTGGAGCTaGATGTGGCTCAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RCIIEFPWHSYITVYYPHSRWWS*MWLREA
Trigger: CGCCTCCCTGAGCCACATGCAGCTCCACCACCTCGA...GTGGGGGTAATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR GCA 90 bp GCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCCTATAGAAGGCAGTGCTGCTTaGTCAGGGTCTTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: AKCRTREDVSLNSHGTPIEGSAA*SGSSHS
Trigger: GGAGTGGGAAGACCCTGAGCAAGCAGCACTGCCTTC...TATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp AGATGTATCATTGAATTCCCATGGCACTCCTATATCACTGTTTATTACCCCCACCGAGCCTCTTGGCCCTaGCAGCCTTTCCCCCAGATC +
Preference number: 4 (lower is better)
Translates to: RCIIEFPWHSYITVYYPHRASWP*QPFPQI
Trigger: GATCTGGGGGAAAGGCTGCCAGGGCCAAGAGGCTCG...GTGGGGGTAATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR GCA 90 bp ATGCTGGTAGATCTGTGTGGGGCCCTTAAAGCAAGCAGCAAAGAGGAAGCGTCTTTTAGAGGCTTAGTGTaGAAGATTGGGTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: MLVDLCGALKASSKEEASFRGLV*KIGSVL
Trigger: CAGCACTGACCCAATCTTGCACACTAAGCCTCTAAA...AGACGCTTCCTCTTTGCTGCTTGCTTTAAGGGCCCCACACAGATCTACCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CCA 90 bp GAAGATGTATCATTGAATTCCCATGGCACTCCTATATCACTGTTTATTACCCCCTGGCACGCTCGGCCCTaGCTTCTCTCTCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: EDVSLNSHGTPISLFITPWHARP*LLSPLL
Trigger: GAGAAGAGGAGAGAGAAGCCAGGGCCGAGCGTGCCA...GGGGGTAATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp GCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCCTATAAAGAGGTACTGCAGGTaGGACAGGCCCGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: AKCRTREDVSLNSHGTPIKRYCR*DRPANA
Trigger: TGCATTTGCGGGCCTGTCCCACCTGCAGTACCTCTT...TATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp GCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCCTATAGGGAGGGTCTCCAGATaGTTATTGGCCAGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: AKCRTREDVSLNSHGTPIGRVSR*LLARLR
Trigger: CCTAAGCCTGGCCAATAACCATCTGGAGACCCTCCC...TATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp ATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGCTCTTAGTGTGCAAGATTaGGTCAGTGCTGAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: IGCVEFRMGKECHQPLGALSVQD*VSAEKP
Trigger: TGGCTTTTCAGCACTGACCCAATCTTGCACACTAAG...AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp GAAGATGTATCATTGAATTCCCATGGCACTCCTATATCACTGTTTATTACCCCCTCGATGAAGAGGTACTaGAGGTGGGACAGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: EDVSLNSHGTPISLFITPSMKRY*RWDRPA
Trigger: TGCGGGCCTGTCCCACCTGCAGTACCTCTTCATCGA...GGGGGTAATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp TTCACCTTCTACAGTTGTACATTTCTCCCACCACCTCTGGCTGAACTCCATCCCGCGTGGAGTTTAGAATaGGAAAGGAATGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: FTFYSCTFLPPPLAELHPAWSLE*ERNAIN
Trigger: GTTGATGGCATTCCTTTCCCATTCTAAACTCCACGC...GGGATGGAGTTCAGCCAGAGGTGGTGGGAGAAATGTACAACTGTAGAAGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR GCA 90 bp AGATGTATCATTGAATTCCCATGGCACTCCTATATCACTGTTTATTACCCCCACGGACAGGCCCGCAAATaGATCGTCCTCAATCACGGA +
Preference number: 4 (lower is better)
Translates to: RCIIEFPWHSYITVYYPHGQARK*IVLNHG
Trigger: TCCGTGATTGAGGACGATGCATTTGCGGGCCTGTCC...GTGGGGGTAATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR GCA 90 bp AGATGTATCATTGAATTCCCATGGCACTCCTATATCACTGTTTATTACCCCCACTCAGGAAGGCAGTGCTaGTTGCTCAGGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RCIIEFPWHSYITVYYPHSGRQC*LLRVFP
Trigger: TGGGAAGACCCTGAGCAAGCAGCACTGCCTTCCTGA...GTGGGGGTAATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591633.2
3UTR CAA 72 bp CCCGGCGCCAAATGCCGAACACGTGAAGATGTATCATaGAATTCCCATGGCACTCCTATATCACTGTTTATT +
Preference number: 4 (lower is better)
Translates to: PGAKCRTREDVS*NSHGTPISLFI
Trigger: AATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR TCA 90 bp AGATGTATCATTGAATTCCCATGGCACTCCTATATCACTGTTTATTACCCCCACGTGAAGATGTATCATTaGATTCCCATGGCACTCCTA +
Preference number: 4 (lower is better)
Translates to: RCIIEFPWHSYITVYYPHVKMYH*IPMALL
Trigger: TAGGAGTGCCATGGGAATTCAATGATACATCTTCAC...GTGGGGGTAATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CCA 90 bp GCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCCTATAATCATTGAATTCCCATaGCACTCCTATATCACTGTT +
Preference number: 4 (lower is better)
Translates to: AKCRTREDVSLNSHGTPIIIEFP*HSYITV
Trigger: AACAGTGATATAGGAGTGCCATGGGAATTCAATGAT...TATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CAA 90 bp CCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCACGCGCCCCAGCACCAGTGGCTaGCAGGACACCACGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PGSPRHLPLSLPVPRRTRPSTSG*QDTTEA
Trigger: GGCCTCCGTGGTGTCCTGCAAGCCACTGGTGCTGGG...GCGCGTGCGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS CCA 90 bp TGTGGCTCAGGGAGGCGGGGCCCGCACAGGCGCCGGTCCCCACGCTaGCATTCACGGTGGGCATCCACTGCAGGAGCCAGAGGACGCGGC +
Preference number: 5 (lower is better)
Translates to: CGSGRRGPHRRRSPR*HSRWASTAGARGRG
Trigger: GCCGCGTCCTCTGGCTCCTGCAGTGGATGCCCACCGTGAATGCCAGCGTGGGGACCGGCGCCTGTGCGGGCCCCGCCTCCCTGAGCCACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000473160.6
ENST00000493050.5
ENST00000587780.5
ENST00000591633.2
ENST00000593248.5
CDS-3UTR CAA 90 bp GAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCCCCAGCACCAGTGGCTaGCAGGACACCACGGAGGCC +
Preference number: 5 (lower is better)
Translates to: EGHQAPRDTSRCPSLCPGPSTSG*QDTTEA
Trigger: GGCCTCCGTGGTGTCCTGCAAGCCACTGGTGCTGGG...GCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS CCA 90 bp CCACGAAGCAGGGTTGCCCTTCCAGCCACAGGAGCTCGGCGTCATTaGGCCGCAGCAGCCGCCGCGGGGCCAGGGTCTGCGTTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: PRSRVALPATGARRH*AAAAAAGPGSALGP
Trigger: TGGCCCCAACGCAGACCCTGGCCCCGCGGCGGCTGCTGCGGCCCAATGACGCCGAGCTCCTGTGGCTGGAAGGGCAACCCTGCTTCGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS-3UTR CAA 90 bp CTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGTGGTGCTGCCCGCCTaGGAGGCATCGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: LEGHQAPRDTSRCPSLCPVVLPA*EASATT
Trigger: CGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCAC...GGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS CCA 90 bp AGGCGGGGCCCGCACAGGCGCCGGTCCCCACGCTGGCATTCACGGTaGGCATCCACTGCAGGAGCCAGAGGACGCGGCAGTCACACTGGA +
Preference number: 5 (lower is better)
Translates to: RRGPHRRRSPRWHSR*ASTAGARGRGSHTG
Trigger: TCCAGTGTGACTGCCGCGTCCTCTGGCTCCTGCAGTGGATGCCCACCGTGAATGCCAGCGTGGGGACCGGCGCCTGTGCGGGCCCCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000473160.6
ENST00000493050.5
ENST00000587780.5
ENST00000591633.2
ENST00000593248.5
CDS GCA 90 bp GGTGCGGGTAAAAGCCGGGCCCGTCGCGGCACAGCAGCGTGGTGCTaGCCGCCTTGGAGGCATCGGCCACCACGAAGCAGGGTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: GAGKSRARRGTAAWC*PPWRHRPPRSRVAL
Trigger: AAGGGCAACCCTGCTTCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCACGCTGCTGTGCCGCGACGGGCCCGGCTTTTACCCGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS GCA 90 bp TCTGGTGCGGGTAAAAGCCGGGCCCGTCGCGGCACAGCAGCGTGGTaGTGCCCGCCTTGGAGGCATCGGCCACCACGAAGCAGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: SGAGKSRARRGTAAW*CPPWRHRPPRSRVA
Trigger: GGCAACCCTGCTTCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCACGCTGCTGTGCCGCGACGGGCCCGGCTTTTACCCGCACCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS CCA 90 bp GGCTCTGGTGCGGGTAAAAGCCGGGCCCGTCGCGGCACAGCAGCGTaGTGCTGCCCGCCTTGGAGGCATCGGCCACCACGAAGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: GSGAGKSRARRGTAA*CCPPWRHRPPRSRV
Trigger: AACCCTGCTTCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCACGCTGCTGTGCCGCGACGGGCCCGGCTTTTACCCGCACCAGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS CCA 90 bp GCCTCGGGGATGTCTGTGCGTCTCTCGAAGCGGCCACCGGTCCAGTaGAAGAGCACGGGCCGCTGGGAAGCCGAGGCCAGCAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ASGMSVRLSKRPPVQ*KSTGRWEAEASSRW
Trigger: CCACCTGCTGCTGGCCTCGGCTTCCCAGCGGCCCGTGCTCTTCCACTGGACCGGTGGCCGCTTCGAGAGACGCACAGACATCCCCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS GCA 90 bp GTGGTGCTGCCCGCCTTGGAGGCATCGGCCACCACGAAGCAGGGTTaGCCTTCCAGCCACAGGAGCTCGGCGTCATTGGGCCGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VVLPALEASATTKQG*PSSHRSSASLGRSS
Trigger: GCTGCTGCGGCCCAATGACGCCGAGCTCCTGTGGCTGGAAGGGCAACCCTGCTTCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS CCA 90 bp AAAAGCCGGGCCCGTCGCGGCACAGCAGCGTGGTGCTGCCCGCCTTaGAGGCATCGGCCACCACGAAGCAGGGTTGCCCTTCCAGCCACA +
Preference number: 5 (lower is better)
Translates to: KSRARRGTAAWCCPP*RHRPPRSRVALPAT
Trigger: TGTGGCTGGAAGGGCAACCCTGCTTCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCACGCTGCTGTGCCGCGACGGGCCCGGCTTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS-3UTR CAA 90 bp CAGCTTGCTGGGCGGCCGCACGCATGCGCACAAGCAGCAGAGGGGAACCCGCCCGGGGACACTTTCCCTTaGGGGGTCTCCAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: QLAGRPHACAQAAEGNPPGDTFP*GVSRPP
Trigger: TGGTGGCCTGGAGACCCCCAAAGGGAAAGTGTCCCC...GGGCGGGTTCCCCTCTGCTGCTTGTGCGCATGCGTGCGGCCGCCCAGCAAGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CAA 90 bp AAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCGGCGCTGCACTTGAAAGTCTaGGGGTCGAGGTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: KGTRLPATPPAVPPCAPALHLKV*GSRWWS
Trigger: GCTCCACCACCTCGACCCCAAGACTTTCAAGTGCAG...CGCCGGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CAA 90 bp CTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCCCCACCACGAAGCAGGGTaGCCCTTCCAGCCACAGGAG +
Preference number: 5 (lower is better)
Translates to: LEGHQAPRDTSRCPSLCPHHEAG*PFQPQE
Trigger: CTCCTGTGGCTGGAAGGGCAACCCTGCTTCGTGGTG...GGGGCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CAA 90 bp GAATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTAGGAGCTCGGCGTCATaGGGCCGCAGCAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: ECHQPLGAFRGTSGVGAGRSSAS*GRSSRR
Trigger: GCGGCGGCTGCTGCGGCCCAATGACGCCGAGCTCCT...ACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp ACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCGTCCAGCACCACGAAGCAGGGTaGCCCTTCCAGCCACAGGAG +
Preference number: 5 (lower is better)
Translates to: TGGPSPQVGPGASQGAVQHHEAG*PFQPQE
Trigger: CTCCTGTGGCTGGAAGGGCAACCCTGCTTCGTGGTG...CTGGACGGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp ATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGGTGGTGCTGCCCGCCTaGGAGGCATCGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: MNVAHGQQLTGGPSPQVGVVLPA*EASATT
Trigger: CGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCAC...CCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp CCATCTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGGAGCTCGGACTCGTCTaGTCCTTGCCTCCGTCGCCC +
Preference number: 5 (lower is better)
Translates to: PSRRAPGSPRHLPLSLPVELGLV*SLPPSP
Trigger: GGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTC...CACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS CCA 90 bp CTCCGGGAAATGGCAGGGCAGGGAGTGAGACGAGCCTCTTGGCCCTaGCAGCCTTTCCCCCAGATCTCCCGCCTCCCACCCCATCGGGAA +
Preference number: 5 (lower is better)
Translates to: LREMAGQGVRRASWP*QPFPQISRLPPHRE
Trigger: TTCCCGATGGGGTGGGAGGCGGGAGATCTGGGGGAAAGGCTGCCAGGGCCAAGAGGCTCGTCTCACTCCCTGCCCTGCCATTTCCCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473160.6
ENST00000591633.2
CDS-3UTR CAA 90 bp CGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCAGGAGCTCGGCGTCATaGGGCCGCAGCAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RPVLSCLRGWRSSRKAIGRSSAS*GRSSRR
Trigger: GCGGCGGCTGCTGCGGCCCAATGACGCCGAGCTCCT...GCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp CCATCTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCGCCCAGTGCTGAGTaGTCTTCGAGGTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: PSRRAPGSPRHLPLSLPVPPSAE*SSRLAL
Trigger: GAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGG...CACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CAA 90 bp CTGGTCCCTGGCGATGAGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGCGGAGTCAGCCAGCCTaGAGGGGGTCAGAGTCTTGG +
Preference number: 5 (lower is better)
Translates to: LVPGDEQWLEDVGTARGKRSQPA*RGSESW
Trigger: CCAAGACTCTGACCCCCTCAAGGCTGGCTGACTCCG...CTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGCCAGGGACCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS GCA 90 bp GGAAGTGGCGTGTGGCATAGACATCCTCGGCCTCGGGGATGTCTGTaGGTCTCTCGAAGCGGCCACCGGTCCAGTGGAAGAGCACGGGCC +
Preference number: 5 (lower is better)
Translates to: GSGVWHRHPRPRGCL*VSRSGHRSSGRARA
Trigger: GGCCCGTGCTCTTCCACTGGACCGGTGGCCGCTTCGAGAGACGCACAGACATCCCCGAGGCCGAGGATGTCTATGCCACACGCCACTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS-3UTR CAA 90 bp ACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCGTCCAGCTGCACTTGAAAGTCTaGGGGTCGAGGTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: TGGPSPQVGPGASQGAVQLHLKV*GSRWWS
Trigger: GCTCCACCACCTCGACCCCAAGACTTTCAAGTGCAG...CTGGACGGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp GGCCTAGACGTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCACCACGAAGCAGGGTaGCCCTTCCAGCCACAGGAG +
Preference number: 5 (lower is better)
Translates to: GLDVWLMNVAHGQQLTGGHHEAG*PFQPQE
Trigger: CTCCTGTGGCTGGAAGGGCAACCCTGCTTCGTGGTG...CCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACACGTCTAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp CGTCGCCCATCTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCACCGCGCGAGGGAAGTaGCTGCAGCAGACGAAACAT +
Preference number: 5 (lower is better)
Translates to: RRPSRRAPGSPRHLPLSLTARGK*LQQTKH
Trigger: ATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGGT...GAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAGATGGGCGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CAA 90 bp CACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCATGCCCAGAGTCCCGTaGGTGGTCTCAGGCACTGAG +
Preference number: 5 (lower is better)
Translates to: HGQQLTGGPSPQVGPGASMPRVP*VVSGTE
Trigger: CTCAGTGCCTGAGACCACCAACGGGACTCTGGGCAT...GCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp AGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCCCGAGCTCGGACTCGTCTaGTCCTTGCCTCCGTCGCCC +
Preference number: 5 (lower is better)
Translates to: SSARDLHLDSMQCTSLHPELGLV*SLPPSP
Trigger: GGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTC...GGGGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS TCA 90 bp GCTTGCTCAGGGTCTTCCCACTCCGGGAAATGGCAGGGCAGGGAGTaGGACGAGCCTCTTGGCCCTGGCAGCCTTTCCCCCAGATCTCCC +
Preference number: 5 (lower is better)
Translates to: ACSGSSHSGKWQGRE*DEPLGPGSLSPRSP
Trigger: GGGAGATCTGGGGGAAAGGCTGCCAGGGCCAAGAGGCTCGTCTCACTCCCTGCCCTGCCATTTCCCGGAGTGGGAAGACCCTGAGCAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473160.6
ENST00000591633.2
CDS GCA 90 bp CCCTTGAGCTGGTTGTCGGCCCAGCCAGGCCCCACTCACAGCAGGTaGAGAGACGGAATTCTCAGGAAGCTGCCGGCCTTCAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: PLSWLSAQPGPTHSR*RDGILRKLPAFSWV
Trigger: CACCCAGCTGAAGGCCGGCAGCTTCCTGAGAATTCCGTCTCTGCACCTGCTGTGAGTGGGGCCTGGCTGGGCCGACAACCAGCTCAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473160.6
CDS CCA 90 bp CAGGACAGCTCTATGGCTCTGCACTTGAAAGTCTTGGGGTCGAGGTaGTGGAGCTGCATGTGGCTCAGGGAGGCGGGGCCCGCACAGGCG +
Preference number: 5 (lower is better)
Translates to: QDSSMALHLKVLGSR*WSCMWLREAGPAQA
Trigger: CGCCTGTGCGGGCCCCGCCTCCCTGAGCCACATGCAGCTCCACCACCTCGACCCCAAGACTTTCAAGTGCAGAGCCATAGAGCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
ENST00000593248.5
CDS-3UTR CAA 90 bp ACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCGTCCAGAATGTGAGGCTCCCCTaGGTAGGAGAAGGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: TGGPSPQVGPGASQGAVQNVRLP*VGEGLY
Trigger: GTAGAGCCCTTCTCCTACCAAGGGGAGCCTCACATT...CTGGACGGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp GTGGTTCGGAGTCAGCCAGCCTTGAGGGGGTCAGAGTCTTGGCATCAGTGTGGGCCCAGCACCAGTGGCTaGCAGGACACCACGGAGGCC +
Preference number: 5 (lower is better)
Translates to: VVRSQPALRGSESWHQCGPSTSG*QDTTEA
Trigger: GGCCTCCGTGGTGTCCTGCAAGCCACTGGTGCTGGG...CCCACACTGATGCCAAGACTCTGACCCCCTCAAGGCTGGCTGACTCCGAACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CAA 90 bp ACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGTGGTGCTGCCCGCCTaGGAGGCATCGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: TRPVLSCLRGWRSSRKAIVVLPA*EASATT
Trigger: CGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCAC...AATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp GTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAATGCCCAGAGTCCCGTaGGTGGTCTCAGGCACTGAG +
Preference number: 5 (lower is better)
Translates to: VADERGPRSAAHRRAITPMPRVP*VVSGTE
Trigger: CTCAGTGCCTGAGACCACCAACGGGACTCTGGGCAT...TGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS GCA 90 bp GCGATGAGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTTaGTGCAGCAGACGAAACATGGAGCCGTCCCAGCGCATGACCATG +
Preference number: 5 (lower is better)
Translates to: AMSSGWKTWAPREGS*CSRRNMEPSQRMTM
Trigger: CATGGTCATGCGCTGGGACGGCTCCATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
CDS-3UTR CAA 90 bp GCGCATTTATTGAGCTCGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGAAGGAGCTCGGCGTCATaGGGCCGCAGCAGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: AHLLSSDSSCPCLRRPSRRSSAS*GRSSRR
Trigger: GCGGCGGCTGCTGCGGCCCAATGACGCCGAGCTCCT...TCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAAATGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CAA 90 bp ACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCGTCCAGCCTCCAGGAAAGCGATaGGCTGCGTGGAGTTTAGAA +
Preference number: 5 (lower is better)
Translates to: TGGPSPQVGPGASQGAVQPPGKR*AAWSLE
Trigger: TTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGG...CTGGACGGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp GTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCACTTCTCCCCGAAGGTTaGGGAAAGGGGTTCGCTGGA +
Preference number: 5 (lower is better)
Translates to: VADERGPRSAAHRRAITPLLPEG*GKGFAG
Trigger: TCCAGCGAACCCCTTTCCCAAACCTTCGGGGAGAAG...TGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392225.7
CDS-3UTR CAA 90 bp CATCTAGAAGGGCACCAGGCTCCCCGCGACACCTCCCGCTGTCCCTCCCTGTGCCTGCTGCCTGGTGTCTaGATTTCTTGTCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: HLEGHQAPRDTSRCPSLCLLPGV*ISCLLP
Trigger: GGGCAGGAGACAAGAAATCAAGACACCAGGCAGCAG...GCACAGGGAGGGACAGCGGGAGGTGTCGCGGGGAGCCTGGTGCCCTTCTAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392225.7
CDS GCA 90 bp GCTGTAGTCCCAGGAGAGAATCAGGCAGCGGCCGGCGAAGGGCTGTaGCAGCACAATGTGAGGCTCCCCTTGGTAGGAGAAGGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: AVVPGENQAAAGEGL*QHNVRLPLVGEGLY
Trigger: GTAGAGCCCTTCTCCTACCAAGGGGAGCCTCACATTGTGCTGGCACAGCCCTTCGCCGGCCGCTGCCTGATTCTCTCCTGGGACTACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
ENST00000593248.5
CDS GCA 90 bp ATGAGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTTGCTaGAGCAGACGAAACATGGAGCCGTCCCAGCGCATGACCATGGAG +
Preference number: 5 (lower is better)
Translates to: MSSGWKTWAPREGSC*SRRNMEPSQRMTME
Trigger: CTCCATGGTCATGCGCTGGGACGGCTCCATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
CDS-3UTR CAA 90 bp GGCCTAGACGTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGAATGTGAGGCTCCCCTaGGTAGGAGAAGGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: GLDVWLMNVAHGQQLTGGNVRLP*VGEGLY
Trigger: GTAGAGCCCTTCTCCTACCAAGGGGAGCCTCACATT...CCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACACGTCTAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp AGCTCTGCACGTGACCTCCACCTCGACTCCATGCAGTGCACCAGCCTGCACCCCACCGCGCGAGGGAAGTaGCTGCAGCAGACGAAACAT +
Preference number: 5 (lower is better)
Translates to: SSARDLHLDSMQCTSLHPTARGK*LQQTKH
Trigger: ATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGGT...GGGGTGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp CAGCTCACAGGCGGGCCATCACCCCAAGTAGGGCCAGGAGCCAGCCAAGGGGCCTGCACAGCGCATTTATaGAGCTCGGACTCGTCTTGT +
Preference number: 5 (lower is better)
Translates to: QLTGGPSPQVGPGASQGACTAHL*SSDSSC
Trigger: ACAAGACGAGTCCGAGCTCAATAAATGCGCTGTGCA...GGCCCCTTGGCTGGCTCCTGGCCCTACTTGGGGTGATGGCCCGCCTGTGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS GCA 90 bp GGGAGCCTGTTAACCAGCTTAGAAGCCCCCTGCCAGCACATAAGCTaGTCCTGGGTGCTCCTCATTTCTGGCGGACCCCGAGCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GSLLTSLEAPCQHIS*SWVLLISGGPRACS
Trigger: AGAGCAGGCTCGGGGTCCGCCAGAAATGAGGAGCACCCAGGAGCAGCTTATGTGCTGGCAGGGGGCTTCTAAGCTGGTTAACAGGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493050.5
CDS CCA 90 bp AGCAGGTGCAGAGACGGAATTCTCAGGAAGCTGCCGGCCTTCAGCTaGGTGACTCCCGTCCTGACGAGTGAGAGTGACAGCAGGGTCGGA +
Preference number: 5 (lower is better)
Translates to: SRCRDGILRKLPAFS*VTPVLTSESDSRVG
Trigger: TCCGACCCTGCTGTCACTCTCACTCGTCAGGACGGGAGTCACCCAGCTGAAGGCCGGCAGCTTCCTGAGAATTCCGTCTCTGCACCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000473160.6
ENST00000493050.5
ENST00000591633.2
ENST00000591840.5
ENST00000592346.1
CDS-3UTR CAA 90 bp CCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACGGGGACACTTTCCCTTaGGGGGTCTCCAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: PDVALDLKGSSGGPVGWDGDTFP*GVSRPP
Trigger: TGGTGGCCTGGAGACCCCCAAAGGGAAAGTGTCCCC...GTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CAA 90 bp GCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTGCACTTGAAAGTCTaGGGGTCGAGGTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: AQAAEGNPPSAELSSRLALHLKV*GSRWWS
Trigger: GCTCCACCACCTCGACCCCAAGACTTTCAAGTGCAG...CGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp GTCCCTGGCGATGAGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTTGTCTATGGCTCTGCACTaGAAAGTCTTGGGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: VPGDEQWLEDVGTARGKLSMALH*KVLGSR
Trigger: CCTCGACCCCAAGACTTTCAAGTGCAGAGCCATAGA...CAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGCCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CAA 90 bp ATGAACGTGGCCCACGGTCAGCAGCTCACAGGCGGGCCATCACCCCAAGTAGGGAATGTGAGGCTCCCCTaGGTAGGAGAAGGGCTCTAC +
Preference number: 5 (lower is better)
Translates to: MNVAHGQQLTGGPSPQVGNVRLP*VGEGLY
Trigger: GTAGAGCCCTTCTCCTACCAAGGGGAGCCTCACATT...CCCTACTTGGGGTGATGGCCCGCCTGTGAGCTGCTGACCGTGGGCCACGTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp AGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACCCCCGCCCAGTGCTGAGTaGTCTTCGAGGTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: RCCFRPEGQLGRSSRLGPPPSAE*SSRLAL
Trigger: GAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGG...GGGTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS GCA 90 bp CACAATGTGAGGCTCCCCTTGGTAGGAGAAGGGCTCTACGCTCAGTaGCGACTCCCCCACCGTCTGGAACCAGGACAGCTCTATGGCTCT +
Preference number: 5 (lower is better)
Translates to: HNVRLPLVGEGLYAQ*RLPHRLEPGQLYGS
Trigger: AGAGCCATAGAGCTGTCCTGGTTCCAGACGGTGGGGGAGTCGGCACTGAGCGTAGAGCCCTTCTCCTACCAAGGGGAGCCTCACATTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
ENST00000593248.5
CDS CCA 90 bp CTGTTAACCAGCTTAGAAGCCCCCTGCCAGCACATAAGCTGCTCCTaGGTGCTCCTCATTTCTGGCGGACCCCGAGCCTGCTCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: LLTSLEAPCQHISCS*VLLISGGPRACSSS
Trigger: GGACGAAGAGCAGGCTCGGGGTCCGCCAGAAATGAGGAGCACCCAGGAGCAGCTTATGTGCTGGCAGGGGGCTTCTAAGCTGGTTAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493050.5
CDS CCA 90 bp TCGGAGTCAGCCAGCCTTGAGGGGGTCAGAGTCTTGGCATCAGTGTaGGGTGGGGTCCTGGTTCAAAGGTCGGCATGTGAGGGTAGGTCA +
Preference number: 5 (lower is better)
Translates to: SESASLEGVRVLASV*GGVLVQRSACEGRS
Trigger: TGACCTACCCTCACATGCCGACCTTTGAACCAGGACCCCACCCCACACTGATGCCAAGACTCTGACCCCCTCAAGGCTGGCTGACTCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CAA 90 bp CCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGGAGTTGTCTTCGAGGTaGGCGCTCCTCCAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: PPSAELSSRLALLQESDWELSSR*ALLQES
Trigger: GCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTC...CCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp GGGCCCTTAAAGCAAGCAGCAAAGAGGAAGCGTCTGCCGGCCATAGTGATGTGGGAGGGGGTCAGAGTCTaGGCATCAGTGTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GPLKQAAKRKRLPAIVMWEGVRV*ASVWGG
Trigger: CCCACCCCACACTGATGCCAAGACTCTGACCCCCTC...CCACATCACTATGGCCGGCAGACGCTTCCTCTTTGCTGCTTGCTTTAAGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CAA 90 bp CAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCTCTATGGCTCTGCACTaGAAAGTCTTGGGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: QAAEGNPPSAELSSRLALSMALH*KVLGSR
Trigger: CCTCGACCCCAAGACTTTCAAGTGCAGAGCCATAGA...GAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp GCTGAGTTGTCTTCGAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAACCGCGCGAGGGAAGTaGCTGCAGCAGACGAAACAT +
Preference number: 5 (lower is better)
Translates to: AELSSRLALLQESDWLRGTARGK*LQQTKH
Trigger: ATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGGT...TCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp CCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCTGGGACGAGTTGTCTTCGAGGTaGGCGCTCCTCCAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: PDVALDLKGSSGGPVGWDELSSR*ALLQES
Trigger: GCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTC...GTCCCAGCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp TCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGAGAGGGTGCACAGCGCATTTATaGAGCTCGGACTCGTCTTGT +
Preference number: 5 (lower is better)
Translates to: STPRCFQRDQRGRSGLRGCTAHL*SSDSSC
Trigger: ACAAGACGAGTCCGAGCTCAATAAATGCGCTGTGCA...CCCTCTCAACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CAA 90 bp GGCTTAAGGCCTAGACGTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACGGTAGAATCAGGATGTaGGGGCCAGCATCAGTGTCG +
Preference number: 5 (lower is better)
Translates to: GLRPRRVADERGPRSAAHGRIRM*GPASVS
Trigger: CGACACTGATGCTGGCCCCAACATCCTGATTCTACC...GTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACACGTCTAGGCCTTAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CAA 90 bp ATGCCATCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGGTCTCCAGATGGTTATaGGCCAGGCTTAGGTGTGTA +
Preference number: 5 (lower is better)
Translates to: MPSTPRCFQRDQRGRSGLVSRWL*ARLRCV
Trigger: TACACACCTAAGCCTGGCCAATAACCATCTGGAGAC...CAACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGATGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp AGATGTCCAGATGTTGCTTTAGACCTGAAGGGCAGCTCGGGAGGTCCAGTAGGCATGCCCAGAGTCCCGTaGGTGGTCTCAGGCACTGAG +
Preference number: 5 (lower is better)
Translates to: RCPDVALDLKGSSGGPVGMPRVP*VVSGTE
Trigger: CTCAGTGCCTGAGACCACCAACGGGACTCTGGGCAT...GCCTACTGGACCTCCCGAGCTGCCCTTCAGGTCTAAAGCAACATCTGGACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp GGCTTAAGGCCTAGACGTGTGGCTGATGAACGTGGCCCACGGTCAGCAGCTCACCCTCCAGGAAAGCGATaGGCTGCGTGGAGTTTAGAA +
Preference number: 5 (lower is better)
Translates to: GLRPRRVADERGPRSAAHPPGKR*AAWSLE
Trigger: TTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGG...GTGAGCTGCTGACCGTGGGCCACGTTCATCAGCCACACGTCTAGGCCTTAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp CAGGTTGCCTTTGATGGGGAATCTGCCCCAGCCGAGATGTCCAGATGTTGCTTTGGGCCGTGGAACAGCTaGGAAGCAGAAGCCTGTCGG +
Preference number: 5 (lower is better)
Translates to: QVAFDGESAPAEMSRCCFGPWNS*EAEACR
Trigger: CCGACAGGCTTCTGCTTCCAAGCTGTTCCACGGCCC...AAAGCAACATCTGGACATCTCGGCTGGGGCAGATTCCCCATCAAAGGCAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CAA 90 bp CAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTGGCGCTCATGGAGCCAATCTCATaGTCCTCGATGAAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: QAAEGNPPSAELSSRLALMEPIS*SSMKRY
Trigger: GTACCTCTTCATCGAGGACAATGAGATTGGCTCCAT...GAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp CATGCGCACAAGCAGCAGAGGGGAACCCGCCCAGTGCTGAGTTGTCTTCGAGGTTCACAGAGCCAGCATTaGGGGGTAGAATCAGGATGT +
Preference number: 5 (lower is better)
Translates to: HAHKQQRGTRPVLSCLRGSQSQH*GVESGC
Trigger: ACATCCTGATTCTACCCCCAAATGCTGGCTCTGTGA...ACCTCGAAGACAACTCAGCACTGGGCGGGTTCCCCTCTGCTGCTTGTGCGCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CAA 90 bp CAGGTTGCCTTTGATGGGGAATCTGCCCCAGCCGAGATGTCCAGATGTTGCTTTACCCTAGCATCAGCCTaGGGGGCTCAGTGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: QVAFDGESAPAEMSRCCFTLASA*GAQCQG
Trigger: ACCCTGACACTGAGCCCCCAAGGCTGATGCTAGGGT...AAAGCAACATCTGGACATCTCGGCTGGGGCAGATTCCCCATCAAAGGCAACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS-3UTR CAA 90 bp TCAACCCCTCGGTGCTTTCAGAGGGACCAGCGGGGTAGGAGCGGGTTGAGAGGGTTTCACCTTCTACAGTaGTACATTTCTCCCACCACC +
Preference number: 5 (lower is better)
Translates to: STPRCFQRDQRGRSGLRGFHLLQ*YISPTT
Trigger: GGTGGTGGGAGAAATGTACAACTGTAGAAGGTGAAA...CCCTCTCAACCCGCTCCTACCCCGCTGGTCCCTCTGAAAGCACCGAGGGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS GCA 90 bp TCCACCCTCAGCCTAGGTGGGCATGGGCACGCAGGTGTGAGTATGTaGATGGACACAAATGCTTTTGTACAGACGTGTGCATACACCCCC +
Preference number: 5 (lower is better)
Translates to: STLSLGGHGHAGVSM*MDTNAFVQTCAYTP
Trigger: GGGGGTGTATGCACACGTCTGTACAAAAGCATTTGTGTCCATGCACATACTCACACCTGCGTGCCCATGCCCACCTAGGCTGAGGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473160.6
ENST00000593248.5
CDS GCA 90 bp ATAAGCTGCTCCTGGGTGCTCCTCATTTCTGGCGGACCCCGAGCCTaGTCTTCGTCCATATCTGGGCCTAGTTACACCAATCTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: ISCSWVLLISGGPRA*SSSISGPSYTNLGK
Trigger: CTTTCCCAGATTGGTGTAACTAGGCCCAGATATGGACGAAGAGCAGGCTCGGGGTCCGCCAGAAATGAGGAGCACCCAGGAGCAGCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493050.5
CDS CCA 90 bp CCCTTCCTGGGTTTCTATGAGTCAGGGAGAGCCAGAATCAGGCTCTaGTTATCCGGGCCCTTTGTAGATAGGTACTGCAGGTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: PFLGFYESGRARIRL*LSGPFVDRYCRWDR
Trigger: CCTGTCCCACCTGCAGTACCTATCTACAAAGGGCCCGGATAACCAGAGCCTGATTCTGGCTCTCCCTGACTCATAGAAACCCAGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592346.1
ENST00000593248.5
CDS-3UTR CAA 90 bp TTCACCTTCTACAGTTGTACATTTCTCCCACCACCTCTGGCTGAACTCCATCCCCCGCCCAGTGCTGAGTaGTCTTCGAGGTTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: FTFYSCTFLPPPLAELHPPPSAE*SSRLAL
Trigger: GAGCGCCAACCTCGAAGACAACTCAGCACTGGGCGG...GGGATGGAGTTCAGCCAGAGGTGGTGGGAGAAATGTACAACTGTAGAAGGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS GCA 90 bp ATTGTCCTCGATGAAGAGGTACTGCAGGTGGGACAGGCCCGCAAATaGATCGTCCTCAATCACGGAGAAGGAGTTGGAGGTGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: IVLDEEVLQVGQARK*IVLNHGEGVGGEEE
Trigger: CTCCTCTTCACCTCCAACTCCTTCTCCGTGATTGAGGACGATGCATTTGCGGGCCTGTCCCACCTGCAGTACCTCTTCATCGAGGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000591633.2
ENST00000591840.5
CDS GCA 90 bp ATTGTCCTCGATGAAGAGGTACTGCAGGTGGGACAGGCCCGCAAATaGATCGTCCTCAATCACGGAGAAGGAGTTGGAGGTGAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: IVLDEEVLQVGQARK*IVLNHGEGVGGEEA
Trigger: AGCCTCTTCACCTCCAACTCCTTCTCCGTGATTGAGGACGATGCATTTGCGGGCCTGTCCCACCTGCAGTACCTCTTCATCGAGGACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473160.6
CDS-3UTR CAA 90 bp GAGGTTGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAATCTATGGCTCTGCACTaGAAAGTCTTGGGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: EVGAPPGKRLAAWSLEWESMALH*KVLGSR
Trigger: CCTCGACCCCAAGACTTTCAAGTGCAGAGCCATAGA...TTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp ATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGCTGAGTTGTCTTCGAGGTaGGCGCTCCTCCAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: IGCVEFRMGKECHQPLGAELSSR*ALLQES
Trigger: GCTTTCCTGGAGGAGCGCCAACCTCGAAGACAACTC...AGCACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp GCGCATTTATTGAGCTCGGACTCGTCTTGTCCTTGCCTCCGTCGCCCATCTAGAATGGAGCCAATCTCATaGTCCTCGATGAAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: AHLLSSDSSCPCLRRPSRMEPIS*SSMKRY
Trigger: GTACCTCTTCATCGAGGACAATGAGATTGGCTCCAT...TCTAGATGGGCGACGGAGGCAAGGACAAGACGAGTCCGAGCTCAATAAATGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310123.8
ENST00000392225.7
CDS-3UTR CAA 90 bp TGGCGCTCCTCCAGGAAAGCGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAAGTCTCCAGATGGTTATaGGCCAGGCTTAGGTGTGTA +
Preference number: 5 (lower is better)
Translates to: WRSSRKAIGCVEFRMGKEVSRWL*ARLRCV
Trigger: TACACACCTAAGCCTGGCCAATAACCATCTGGAGAC...TTCCTTTCCCATTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGGAGCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp CGATTGGCTGCGTGGAGTTTAGAATGGGAAAGGAATGCCATCAACCCCTCGGTGGTCTCCAGATGGTTATaGGCCAGGCTTAGGTGTGTA +
Preference number: 5 (lower is better)
Translates to: RLAAWSLEWERNAINPSVVSRWL*ARLRCV
Trigger: TACACACCTAAGCCTGGCCAATAACCATCTGGAGAC...CACCGAGGGGTTGATGGCATTCCTTTCCCATTCTAAACTCCACGCAGCCAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000587780.5
CDS-3UTR CAA 90 bp GCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCCTATAAGTGAGACGAGCCTCTaGGCCCTGGCAGCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: AKCRTREDVSLNSHGTPISETSL*ALAAFP
Trigger: GGGAAAGGCTGCCAGGGCCAAGAGGCTCGTCTCACT...TATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CAA 90 bp TTCACCTTCTACAGTTGTACATTTCTCCCACCACCTCTGGCTGAACTCCATCCCCCTCCAGGAAAGCGATaGGCTGCGTGGAGTTTAGAA +
Preference number: 5 (lower is better)
Translates to: FTFYSCTFLPPPLAELHPPPGKR*AAWSLE
Trigger: TTCTAAACTCCACGCAGCCAATCGCTTTCCTGGAGG...GGGATGGAGTTCAGCCAGAGGTGGTGGGAGAAATGTACAACTGTAGAAGGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS TCA 90 bp GTCCCAGGCCCGGCGCCAAATGCCGAACACGTGAAGATGTATCATTaGATTCCCATGGCACTCCTATATCACTGTTTATTACCCCCACTT +
Preference number: 5 (lower is better)
Translates to: VPGPAPNAEHVKMYH*IPMALLYHCLLPPL
Trigger: AAGTGGGGGTAATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGCGCCGGGCCTGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473160.6
ENST00000591633.2
CDS-3UTR CAA 90 bp GAAGATGTATCATTGAATTCCCATGGCACTCCTATATCACTGTTTATTACCCCCGGGGACACTTTCCCTTaGGGGGTCTCCAGGCCACCA +
Preference number: 5 (lower is better)
Translates to: EDVSLNSHGTPISLFITPGDTFP*GVSRPP
Trigger: TGGTGGCCTGGAGACCCCCAAAGGGAAAGTGTCCCC...GGGGGTAATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CAA 90 bp GCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCCTATACTGCACTTGAAAGTCTaGGGGTCGAGGTGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: AKCRTREDVSLNSHGTPILHLKV*GSRWWS
Trigger: GCTCCACCACCTCGACCCCAAGACTTTCAAGTGCAG...TATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CAA 90 bp GCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCCTATACCTATGGCTCTGCACTaGAAAGTCTTGGGGTCGAGG +
Preference number: 5 (lower is better)
Translates to: AKCRTREDVSLNSHGTPIPMALH*KVLGSR
Trigger: CCTCGACCCCAAGACTTTCAAGTGCAGAGCCATAGG...TATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS TCA 90 bp TTAGGTAGCTGTCTATCTGTTGGTCTCTATGTGTGTGAGTGTATGTaGGTGTGTGTGTGTCCTGCTGCCTGGTGTCTTGATTTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: LGSCLSVGLYVCECM*VCVCPAAWCLDFLS
Trigger: AGACAAGAAATCAAGACACCAGGCAGCAGGACACACACACACTCACATACACTCACACACATAGAGACCAACAGATAGACAGCTACCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392225.7
CDS-3UTR CAA 90 bp AGATGTATCATTGAATTCCCATGGCACTCCTATATCACTGTTTATTACCCCCACGTCTCCAGATGGTTATaGGCCAGGCTTAGGTGTGTA +
Preference number: 5 (lower is better)
Translates to: RCIIEFPWHSYITVYYPHVSRWL*ARLRCV
Trigger: TACACACCTAAGCCTGGCCAATAACCATCTGGAGAC...GTGGGGGTAATAAACAGTGATATAGGAGTGCCATGGGAATTCAATGATACATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS-3UTR CAA 90 bp GCCAAATGCCGAACACGTGAAGATGTATCATTGAATTCCCATGGCACTCCTATACGTGAAGATGTATCATaGAATTCCCATGGCACTCCT +
Preference number: 5 (lower is better)
Translates to: AKCRTREDVSLNSHGTPIREDVS*NSHGTP
Trigger: AGGAGTGCCATGGGAATTCAATGATACATCTTCACG...TATAGGAGTGCCATGGGAATTCAATGATACATCTTCACGTGTTCGGCATTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591633.2
CDS CCA 72 bp GGGAGGCGGGGCCCGCACAGGCGCCGGTCCCCACGCTaGCATTCACGGTGGGCATCCACTGCAGGAGCCAGA +
Preference number: 6 (lower is better)
Translates to: GRRGPHRRRSPR*HSRWASTAGAR
Trigger: TCTGGCTCCTGCAGTGGATGCCCACCGTGAATGCCAGCGTGGGGACCGGCGCCTGTGCGGGCCCCGCCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000473160.6
ENST00000493050.5
ENST00000587780.5
ENST00000591633.2
ENST00000593248.5
CDS CCA 72 bp AGGGTTGCCCTTCCAGCCACAGGAGCTCGGCGTCATTaGGCCGCAGCAGCCGCCGCGGGGCCAGGGTCTGCG +
Preference number: 6 (lower is better)
Translates to: RVALPATGARRH*AAAAAAGPGSA
Trigger: CGCAGACCCTGGCCCCGCGGCGGCTGCTGCGGCCCAATGACGCCGAGCTCCTGTGGCTGGAAGGGCAACCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS CAA 90 bp ACCACGAAGCAGGGTTGCCCTTCCAGCCACAGGAGCTCGGCGTCATaGGGCCGCAGCAGCCGCCGCGGGGCCAGGGTCTGCGTTGGGGCC +
Preference number: 6 (lower is better)
Translates to: TTKQGCPSSHRSSAS*GRSSRRGARVCVGA
Trigger: GGCCCCAACGCAGACCCTGGCCCCGCGGCGGCTGCTGCGGCCCAATGACGCCGAGCTCCTGTGGCTGGAAGGGCAACCCTGCTTCGTGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS CCA 72 bp GCGGGTAAAAGCCGGGCCCGTCGCGGCACAGCAGCGTaGTGCTGCCCGCCTTGGAGGCATCGGCCACCACGA +
Preference number: 6 (lower is better)
Translates to: AGKSRARRGTAA*CCPPWRHRPPR
Trigger: TCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCACGCTGCTGTGCCGCGACGGGCCCGGCTTTTACCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS CAA 72 bp GGCCCGTCGCGGCACAGCAGCGTGGTGCTGCCCGCCTaGGAGGCATCGGCCACCACGAAGCAGGGTTGCCCT +
Preference number: 6 (lower is better)
Translates to: GPSRHSSVVLPA*EASATTKQGCP
Trigger: AGGGCAACCCTGCTTCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCACGCTGCTGTGCCGCGACGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS GCA 72 bp AAAAGCCGGGCCCGTCGCGGCACAGCAGCGTGGTGCTaGCCGCCTTGGAGGCATCGGCCACCACGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: KSRARRGTAAWC*PPWRHRPPRSR
Trigger: CCTGCTTCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCACGCTGCTGTGCCGCGACGGGCCCGGCTTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS GCA 72 bp GGTAAAAGCCGGGCCCGTCGCGGCACAGCAGCGTGGTaGTGCCCGCCTTGGAGGCATCGGCCACCACGAAGC +
Preference number: 6 (lower is better)
Translates to: GKSRARRGTAAW*CPPWRHRPPRS
Trigger: GCTTCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCACGCTGCTGTGCCGCGACGGGCCCGGCTTTTACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS CCA 72 bp GCCCGTCGCGGCACAGCAGCGTGGTGCTGCCCGCCTTaGAGGCATCGGCCACCACGAAGCAGGGTTGCCCTT +
Preference number: 6 (lower is better)
Translates to: ARRGTAAWCCPP*RHRPPRSRVAL
Trigger: AAGGGCAACCCTGCTTCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCACGCTGCTGTGCCGCGACGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS CAA 90 bp CGTGGTGCTGCCCGCCTTGGAGGCATCGGCCACCACGAAGCAGGGTaGCCCTTCCAGCCACAGGAGCTCGGCGTCATTGGGCCGCAGCAG +
Preference number: 6 (lower is better)
Translates to: RGAARLGGIGHHEAG*PFQPQELGVIGPQQ
Trigger: CTGCTGCGGCCCAATGACGCCGAGCTCCTGTGGCTGGAAGGGCAACCCTGCTTCGTGGTGGCCGATGCCTCCAAGGCGGGCAGCACCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS GCA 72 bp CCCGCCTTGGAGGCATCGGCCACCACGAAGCAGGGTTaGCCTTCCAGCCACAGGAGCTCGGCGTCATTGGGC +
Preference number: 6 (lower is better)
Translates to: PALEASATTKQG*PSSHRSSASLG
Trigger: GCCCAATGACGCCGAGCTCCTGTGGCTGGAAGGGCAACCCTGCTTCGTGGTGGCCGATGCCTCCAAGGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS CCA 72 bp ATGGCAGGGCAGGGAGTGAGACGAGCCTCTTGGCCCTaGCAGCCTTTCCCCCAGATCTCCCGCCTCCCACCC +
Preference number: 6 (lower is better)
Translates to: MAGQGVRRASWP*QPFPQISRLPP
Trigger: GGGTGGGAGGCGGGAGATCTGGGGGAAAGGCTGCCAGGGCCAAGAGGCTCGTCTCACTCCCTGCCCTGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473160.6
ENST00000591633.2
CDS CAA 72 bp GCCCGCCTTGGAGGCATCGGCCACCACGAAGCAGGGTaGCCCTTCCAGCCACAGGAGCTCGGCGTCATTGGG +
Preference number: 6 (lower is better)
Translates to: ARLGGIGHHEAG*PFQPQELGVIG
Trigger: CCCAATGACGCCGAGCTCCTGTGGCTGGAAGGGCAACCCTGCTTCGTGGTGGCCGATGCCTCCAAGGCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS CAA 90 bp GCAGCGGCCGGCGAAGGGCTGTGCCAGCACAATGTGAGGCTCCCCTaGGTAGGAGAAGGGCTCTACGCTCAGTGCCGACTCCCCCACCGT +
Preference number: 6 (lower is better)
Translates to: AAAGEGLCQHNVRLP*VGEGLYAQCRLPHR
Trigger: ACGGTGGGGGAGTCGGCACTGAGCGTAGAGCCCTTCTCCTACCAAGGGGAGCCTCACATTGTGCTGGCACAGCCCTTCGCCGGCCGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
ENST00000593248.5
CDS CCA 72 bp CGGGAAATGGCAGGGCAGGGAGTGAGACGAGCCTCTTaGCCCTGGCAGCCTTTCCCCCAGATCTCCCGCCTC +
Preference number: 6 (lower is better)
Translates to: REMAGQGVRRAS*PWQPFPQISRL
Trigger: GAGGCGGGAGATCTGGGGGAAAGGCTGCCAGGGCCAAGAGGCTCGTCTCACTCCCTGCCCTGCCATTTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473160.6
ENST00000591633.2
CDS GCA 72 bp AGGCTCCCCTTGGTAGGAGAAGGGCTCTACGCTCAGTaGCGACTCCCCCACCGTCTGGAACCAGGACAGCTC +
Preference number: 6 (lower is better)
Translates to: RLPLVGEGLYAQ*RLPHRLEPGQL
Trigger: GAGCTGTCCTGGTTCCAGACGGTGGGGGAGTCGGCACTGAGCGTAGAGCCCTTCTCCTACCAAGGGGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
ENST00000593248.5
CDS GCA 72 bp TGGTTGTCGGCCCAGCCAGGCCCCACTCACAGCAGGTaGAGAGACGGAATTCTCAGGAAGCTGCCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: WLSAQPGPTHSR*RDGILRKLPAF
Trigger: GAAGGCCGGCAGCTTCCTGAGAATTCCGTCTCTGCACCTGCTGTGAGTGGGGCCTGGCTGGGCCGACAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473160.6
CDS CAA 90 bp GGCGATGAGCAGTGGCTGGAAGACGTGGGCACCGCGCGAGGGAAGTaGCTGCAGCAGACGAAACATGGAGCCGTCCCAGCGCATGACCAT +
Preference number: 6 (lower is better)
Translates to: GDEQWLEDVGTARGK*LQQTKHGAVPAHDH
Trigger: ATGGTCATGCGCTGGGACGGCTCCATGTTTCGTCTGCTGCAGCAACTTCCCTCGCGCGGTGCCCACGTCTTCCAGCCACTGCTCATCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
CDS GCA 72 bp CCAGGAGAGAATCAGGCAGCGGCCGGCGAAGGGCTGTaGCAGCACAATGTGAGGCTCCCCTTGGTAGGAGAA +
Preference number: 6 (lower is better)
Translates to: PGENQAAAGEGL*QHNVRLPLVGE
Trigger: TTCTCCTACCAAGGGGAGCCTCACATTGTGCTGGCACAGCCCTTCGCCGGCCGCTGCCTGATTCTCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
ENST00000593248.5
CDS GCA 72 bp GTGTGGCATAGACATCCTCGGCCTCGGGGATGTCTGTaGGTCTCTCGAAGCGGCCACCGGTCCAGTGGAAGA +
Preference number: 6 (lower is better)
Translates to: VWHRHPRPRGCL*VSRSGHRSSGR
Trigger: TCTTCCACTGGACCGGTGGCCGCTTCGAGAGACGCACAGACATCCCCGAGGCCGAGGATGTCTATGCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS CCA 72 bp ACAGGAACACGTCCCCACCAGCCTGGAAGTGGCGTGTaGCATAGACATCCTCGGCCTCGGGGATGTCTGTGC +
Preference number: 6 (lower is better)
Translates to: TGTRPHQPGSGV*HRHPRPRGCLC
Trigger: GCACAGACATCCCCGAGGCCGAGGATGTCTATGCCACACGCCACTTCCAGGCTGGTGGGGACGTGTTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
CDS CCA 72 bp AGCTTAGAAGCCCCCTGCCAGCACATAAGCTGCTCCTaGGTGCTCCTCATTTCTGGCGGACCCCGAGCCTGC +
Preference number: 6 (lower is better)
Translates to: SLEAPCQHISCS*VLLISGGPRAC
Trigger: GCAGGCTCGGGGTCCGCCAGAAATGAGGAGCACCCAGGAGCAGCTTATGTGCTGGCAGGGGGCTTCTAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493050.5
CDS CAA 72 bp GGCGAAGGGCTGTGCCAGCACAATGTGAGGCTCCCCTaGGTAGGAGAAGGGCTCTACGCTCAGTGCCGACTC +
Preference number: 6 (lower is better)
Translates to: GEGLCQHNVRLP*VGEGLYAQCRL
Trigger: GAGTCGGCACTGAGCGTAGAGCCCTTCTCCTACCAAGGGGAGCCTCACATTGTGCTGGCACAGCCCTTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
ENST00000593248.5
CDS CCA 72 bp GCCAGCCTTGAGGGGGTCAGAGTCTTGGCATCAGTGTaGGGTGGGGTCCTGGTTCAAAGGTCGGCATGTGAG +
Preference number: 6 (lower is better)
Translates to: ASLEGVRVLASV*GGVLVQRSACE
Trigger: CTCACATGCCGACCTTTGAACCAGGACCCCACCCCACACTGATGCCAAGACTCTGACCCCCTCAAGGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS GCA 72 bp GGTCCGGGGAGCCTGTTAACCAGCTTAGAAGCCCCCTaGCAGCACATAAGCTGCTCCTGGGTGCTCCTCATT +
Preference number: 6 (lower is better)
Translates to: GPGSLLTSLEAP*QHISCSWVLLI
Trigger: AATGAGGAGCACCCAGGAGCAGCTTATGTGCTGGCAGGGGGCTTCTAAGCTGGTTAACAGGCTCCCCGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493050.5
CDS CCA 72 bp AGAGACGGAATTCTCAGGAAGCTGCCGGCCTTCAGCTaGGTGACTCCCGTCCTGACGAGTGAGAGTGACAGC +
Preference number: 6 (lower is better)
Translates to: RDGILRKLPAFS*VTPVLTSESDS
Trigger: GCTGTCACTCTCACTCGTCAGGACGGGAGTCACCCAGCTGAAGGCCGGCAGCTTCCTGAGAATTCCGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000473160.6
ENST00000493050.5
ENST00000591633.2
ENST00000591840.5
ENST00000592346.1
CDS CCA 72 bp CCAGCACATAAGCTGCTCCTGGGTGCTCCTCATTTCTaGCGGACCCCGAGCCTGCTCTTCGTCCATATCTGG +
Preference number: 6 (lower is better)
Translates to: PAHKLLLGAPHF*RTPSLLFVHIW
Trigger: CCAGATATGGACGAAGAGCAGGCTCGGGGTCCGCCAGAAATGAGGAGCACCCAGGAGCAGCTTATGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493050.5
CDS TCA 72 bp TACACTCCCACACATGTGCATAAACGCACACTCCCTTaGGCTGGTTGTCGGCCCAGCCAGGCCCCACTCACA +
Preference number: 6 (lower is better)
Translates to: YTPTHVHKRTLP*AGCRPSQAPLT
Trigger: TGTGAGTGGGGCCTGGCTGGGCCGACAACCAGCTCAAGGGAGTGTGCGTTTATGCACATGTGTGGGAGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473160.6
CDS GCA 72 bp TTAACCAGCTTAGAAGCCCCCTGCCAGCACATAAGCTaGTCCTGGGTGCTCCTCATTTCTGGCGGACCCCGA +
Preference number: 6 (lower is better)
Translates to: LTSLEAPCQHIS*SWVLLISGGPR
Trigger: TCGGGGTCCGCCAGAAATGAGGAGCACCCAGGAGCAGCTTATGTGCTGGCAGGGGGCTTCTAAGCTGGTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493050.5
CDS CCA 72 bp GGGTCAGAGTCTTGGCATCAGTGTGGGGTGGGGTCCTaGTTCAAAGGTCGGCATGTGAGGGTAGGTCAGAGT +
Preference number: 6 (lower is better)
Translates to: GSESWHQCGVGS*FKGRHVRVGQS
Trigger: ACTCTGACCTACCCTCACATGCCGACCTTTGAACCAGGACCCCACCCCACACTGATGCCAAGACTCTGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587780.5
CDS GCA 72 bp TCCTGGGTGCTCCTCATTTCTGGCGGACCCCGAGCCTaGTCTTCGTCCATATCTGGGCCTAGTTACACCAAT +
Preference number: 6 (lower is better)
Translates to: SWVLLISGGPRA*SSSISGPSYTN
Trigger: ATTGGTGTAACTAGGCCCAGATATGGACGAAGAGCAGGCTCGGGGTCCGCCAGAAATGAGGAGCACCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493050.5
CDS CCA 72 bp TTTAACCCTGGCCTCCACCCTCAGCCTAGGTGGGCATaGGCACGCAGGTGTGAGTATGTGCATGGACACAAA +
Preference number: 6 (lower is better)
Translates to: FNPGLHPQPRWA*ARRCEYVHGHK
Trigger: TTTGTGTCCATGCACATACTCACACCTGCGTGCCCATGCCCACCTAGGCTGAGGGTGGAGGCCAGGGTTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473160.6
ENST00000593248.5
CDS CAA 72 bp AACCAGGACAGCTCTATGGCTCTGCACTTGAAAGTCTaGGGGTCGAGGTGGTGGAGCTGCATGTGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: NQDSSMALHLKV*GSRWWSCMWLR
Trigger: CCTGAGCCACATGCAGCTCCACCACCTCGACCCCAAGACTTTCAAGTGCAGAGCCATAGAGCTGTCCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000493050.5
ENST00000587780.5
ENST00000593248.5
CDS GCA 72 bp GATGAAGAGGTACTGCAGGTGGGACAGGCCCGCAAATaGATCGTCCTCAATCACGGAGAAGGAGTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: DEEVLQVGQARK*IVLNHGEGVGG
Trigger: ACCTCCAACTCCTTCTCCGTGATTGAGGACGATGCATTTGCGGGCCTGTCCCACCTGCAGTACCTCTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000473160.6
ENST00000493050.5
ENST00000591633.2
ENST00000591840.5
CDS CCA 72 bp TGGTTATCCGGGCCCTTTGTAGATAGGTACTGCAGGTaGGACAGGCCCGCAAATGCATCGTCCTCAATCACG +
Preference number: 6 (lower is better)
Translates to: WLSGPFVDRYCR*DRPANASSSIT
Trigger: CGTGATTGAGGACGATGCATTTGCGGGCCTGTCCCACCTGCAGTACCTATCTACAAAGGGCCCGGATAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592346.1
ENST00000593248.5
CDS CAA 72 bp CGGAACAGGAATCTGGGGAGGGTCTCCAGATGGTTATaGGCCAGGCTTAGGTGTGTAAGCGAGCGAAGTCCT +
Preference number: 6 (lower is better)
Translates to: RNRNLGRVSRWL*ARLRCVSERSP
Trigger: AGGACTTCGCTCGCTTACACACCTAAGCCTGGCCAATAACCATCTGGAGACCCTCCCCAGATTCCTGTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000473160.6
ENST00000493050.5
ENST00000587780.5
ENST00000591633.2
ENST00000591840.5
ENST00000592346.1
ENST00000593248.5
CDS CCA 72 bp CCAATCTCATTGTCCTCGATGAAGAGGTACTGCAGGTaGGACAGGCCCGCAAATGCATCGTCCTCAATCACG +
Preference number: 6 (lower is better)
Translates to: PISLSSMKRYCR*DRPANASSSIT
Trigger: CGTGATTGAGGACGATGCATTTGCGGGCCTGTCCCACCTGCAGTACCTCTTCATCGAGGACAATGAGATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000473160.6
ENST00000493050.5
ENST00000587780.5
ENST00000591633.2
ENST00000591840.5
CDS GCA 72 bp AGCCTAGGTGGGCATGGGCACGCAGGTGTGAGTATGTaGATGGACACAAATGCTTTTGTACAGACGTGTGCA +
Preference number: 6 (lower is better)
Translates to: SLGGHGHAGVSM*MDTNAFVQTCA
Trigger: TGCACACGTCTGTACAAAAGCATTTGTGTCCATGCACATACTCACACCTGCGTGCCCATGCCCACCTAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473160.6
ENST00000593248.5
CDS CAA 72 bp CCTCTGAGGGCATTCTTAGAGATGGAGCCAATCTCATaGTCCTCGATGAAGAGGTACTGCAGGTGGGACAGG +
Preference number: 6 (lower is better)
Translates to: PLRAFLEMEPIS*SSMKRYCRWDR
Trigger: CCTGTCCCACCTGCAGTACCTCTTCATCGAGGACAATGAGATTGGCTCCATCTCTAAGAATGCCCTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310123.8
ENST00000392225.7
ENST00000473160.6
ENST00000493050.5
ENST00000587780.5
ENST00000591633.2
ENST00000591840.5
CDS TCA 72 bp TGTCTATCTGTTGGTCTCTATGTGTGTGAGTGTATGTaGGTGTGTGTGTGTCCTGCTGCCTGGTGTCTTGAT +
Preference number: 6 (lower is better)
Translates to: CLSVGLYVCECM*VCVCPAAWCLD
Trigger: ATCAAGACACCAGGCAGCAGGACACACACACACTCACATACACTCACACACATAGAGACCAACAGATAGACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392225.7
CDS CAA 72 bp CCTCTGAGGGCATTCTTAGAGATGGAGCCAATCTCATaGTCCTCGATGAAGCTAATTCAGAGTTGTTTCCTG +
Preference number: 6 (lower is better)
Translates to: PLRAFLEMEPIS*SSMKLIQSCFL
Trigger: CAGGAAACAACTCTGAATTAGCTTCATCGAGGACAATGAGATTGGCTCCATCTCTAAGAATGCCCTCAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592346.1
ENST00000593248.5
CDS CAA 90 bp CTCATTGTCCTCGATGAAGCTAATTCAGAGTTGTTTCCTGGTCATTaGAAACGTTTCTTGTCTCTGACTTCTGTACACCCTTCCTGGGTT +
Preference number: 6 (lower is better)
Translates to: LIVLDEANSELFPGH*KRFLSLTSVHPSWV
Trigger: AACCCAGGAAGGGTGTACAGAAGTCAGAGACAAGAAACGTTTCAAATGACCAGGAAACAACTCTGAATTAGCTTCATCGAGGACAATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592346.1
ENST00000593248.5
CDS CAA 90 bp GATGAAGCTAATTCAGAGTTGTTTCCTGGTCATTTGAAACGTTTCTaGTCTCTGACTTCTGTACACCCTTCCTGGGTTTCTATGAGTCAG +
Preference number: 6 (lower is better)
Translates to: DEANSELFPGHLKRF*SLTSVHPSWVSMSQ
Trigger: CTGACTCATAGAAACCCAGGAAGGGTGTACAGAAGTCAGAGACAAGAAACGTTTCAAATGACCAGGAAACAACTCTGAATTAGCTTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592346.1
ENST00000593248.5