Pregenerated sensors for LGALS3 (Homo sapiens)
Ensembl gene IDs: ENSG00000131981Ensembl transcript IDs: ENST00000254301.14, ENST00000553493.5, ENST00000553755.5, ENST00000554715.1, ENST00000556263.1, ENST00000556322.1, ENST00000556438.6
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGCTGTCCAGAAGATGGGTAGGCCCCAGGGCCGCTGGGTGGCCCTaGGTAGACTCCAGGTGCAGGTGCTCCGGGATAAGCTCCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: WLSRRWVGPRAAGWP*VDSRCRCSGISSRC Trigger: GCACCTGGAGCTTATCCCGGAGCACCTGCACCTGGAGTCTACCCAGGGCCACCCAGCGGCCCTGGGGCCTACCCATCTTCTGGACAGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556263.1 ENST00000556322.1 ENST00000556438.6 |
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| CDS CCA 90 bp | GGCACTTGGCTGTCCAGAAGATGGGTAGGCCCCAGGGCCGCTGGGTaGCCCTGGGTAGACTCCAGGTGCAGGTGCTCCGGGATAAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GTWLSRRWVGPRAAG*PWVDSRCRCSGISS Trigger: GGAGCTTATCCCGGAGCACCTGCACCTGGAGTCTACCCAGGGCCACCCAGCGGCCCTGGGGCCTACCCATCTTCTGGACAGCCAAGTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556263.1 ENST00000556322.1 ENST00000556438.6 |
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| CDS GCA 90 bp | CCCTGGGTAGACTCCAGGTGCAGGTGCTCCGGGATAAGCTCCAGGTaGTCCAGGGTAGGCGCCTGGAGGTGCCTGTCCAGGATAAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: PWVDSRCRCSGISSR*SRVGAWRCLSRISP Trigger: GGGGCTTATCCTGGACAGGCACCTCCAGGCGCCTACCCTGGAGCACCTGGAGCTTATCCCGGAGCACCTGCACCTGGAGTCTACCCAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000254301.14 ENST00000553493.5 ENST00000553755.5 ENST00000554715.1 ENST00000556263.1 ENST00000556322.1 ENST00000556438.6 |
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| CDS CCA 90 bp | TATAAGGCACAATCAGTGGCCCAGCAGGGGCGCCATAGGGGCCAGTaGCAGGGTAGGCTCCGGTGGCACTTGGCTGTCCAGAAGATGGGT | + |
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Preference number: 5 (lower is better) Translates to: YKAQSVAQQGRHRGQ*QGRLRWHLAVQKMG Trigger: ACCCATCTTCTGGACAGCCAAGTGCCACCGGAGCCTACCCTGCCACTGGCCCCTATGGCGCCCCTGCTGGGCCACTGATTGTGCCTTATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556263.1 ENST00000556322.1 ENST00000556438.6 |
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| CDS GCA 90 bp | CATCATGGAGCGCACTTCCCGCTACTCAGAGGATTTCTCAGCTCCTaGCGGCAGAGTCCACTCCCTTCCGCCCTGGGCCGAAAAATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HHGAHFPLLRGFLSS*RQSPLPSALGRKIV Trigger: GACAATTTTTCGGCCCAGGGCGGAAGGGAGTGGACTCTGCCGGCAGGAGCTGAGAAATCCTCTGAGTAGCGGGAAGTGCGCTCCATGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556322.1 |
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| CDS GCA 90 bp | CAGACTGTACCGCACTTCCCGCTACTCAGAGGATTTCTCAGCTCCTaGCGGCAGAGTCCACTCCCTTCCGCCCTGGGCCTTTTGGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: QTVPHFPLLRGFLSS*RQSPLPSALGLLVK Trigger: TTTCACCAAAAGGCCCAGGGCGGAAGGGAGTGGACTCTGCCGGCAGGAGCTGAGAAATCCTCTGAGTAGCGGGAAGTGCGGTACAGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS TCA 90 bp | AGTCCACTCCCTTCCGCCCTGGGCCTTTTGGTGAAAGGGTTACTGTaGGTGAGTCCCAGGCCTCGCTCTGCCTGGCTTTCTTCCCAAATC | + |
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Preference number: 5 (lower is better) Translates to: SPLPSALGLLVKGLL*VSPRPRSAWLSSQI Trigger: GATTTGGGAAGAAAGCCAGGCAGAGCGAGGCCTGGGACTCACTCACAGTAACCCTTTCACCAAAAGGCCCAGGGCGGAAGGGAGTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS GCA 90 bp | CCTTTTGGTGAAAGGGTTACTGTGAGTGAGTCCCAGGCCTCGCTCTaGCTGGCTTTCTTCCCAAATCTGCTGCTGGAAAAACAAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: PFGERVTVSESQASL*LAFFPNLLLEKQGS Trigger: GGAGCCTTGTTTTTCCAGCAGCAGATTTGGGAAGAAAGCCAGGCAGAGCGAGGCCTGGGACTCACTCACAGTAACCCTTTCACCAAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS GCA 90 bp | CTTGTTAATTTTGCTCTCCTTACCTGTTTGCATTGGGCTTCACCGTaGCCAGAATTGTTATCAGCATGCGAGGCACCACTCCCCCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: LVNFALLTCLHWASP*PELLSACEAPLPQA Trigger: TGCCTGGGGGAGTGGTGCCTCGCATGCTGATAACAATTCTGGGCACGGTGAAGCCCAATGCAAACAGGTAAGGAGAGCAAAATTAACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556263.1 |
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| CDS CCA 90 bp | TGCAGTTCTAATCCATCTCTAGGCATTATGCCTAAGTCAGTAGTGTaGCGCCACAAAAACATCTCTTCAAGGGGCAGGGATGCTATCCAG | + |
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Preference number: 5 (lower is better) Translates to: CSSNPSLGIMPKSVV*RHKNISSRGRDAIQ Trigger: CTGGATAGCATCCCTGCCCCTTGAAGAGATGTTTTTGTGGCGCCACACTACTGACTTAGGCATAATGCCTAGAGATGGATTAGAACTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS GCA 90 bp | TTTTCACTTTATTCTTGCCTCCCAACGTCTCAGATCAGGGAGGGCTaGATTTTCATAATTAGCTCAAGTCAGGAGTTAGCGCTCCTCTAC | + |
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Preference number: 5 (lower is better) Translates to: FSLYSCLPTSQIREG*IFIISSSQELALLY Trigger: GTAGAGGAGCGCTAACTCCTGACTTGAGCTAATTATGAAAATGCAGCCCTCCCTGATCTGAGACGTTGGGAGGCAAGAATAAAGTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS GCA 90 bp | ACCCAGATAACGCATCATGGAGCGAAAAATTGTCTGCCATTTTCCTaGAGCAAGAATCAGAAGGAATTCCTAACGCAGCTGAGTATTTGG | + |
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Preference number: 5 (lower is better) Translates to: TQITHHGAKNCLPFS*SKNQKEFLTQLSIW Trigger: CCAAATACTCAGCTGCGTTAGGAATTCCTTCTGATTCTTGCTGCAGGAAAATGGCAGACAATTTTTCGCTCCATGATGCGTTATCTGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000553493.5 |
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| CDS TCA 90 bp | GGAGTTAGCGCTCCTCTACTTATAGCACATACTTTTTCATCACCGTaGGAAAAACAATCACAAACATCAGAATGCCCAGACTGTACCGCA | + |
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Preference number: 5 (lower is better) Translates to: GVSAPLLIAHTFSSP*EKQSQTSECPDCTA Trigger: TGCGGTACAGTCTGGGCATTCTGATGTTTGTGATTGTTTTTCTCACGGTGATGAAAAAGTATGTGCTATAAGTAGAGGAGCGCTAACTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS CCA 90 bp | CAAACAATGACTCTCCTGTTGTTCTCATTGAAGCGTGGGTTAAAGTaGAAGGCAACATCATTCCCTCTTTGGAAATCTAAAGCAATTCTG | + |
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Preference number: 5 (lower is better) Translates to: QTMTLLLFSLKRGLK*KATSFPLWKSKAIL Trigger: CAGAATTGCTTTAGATTTCCAAAGAGGGAATGATGTTGCCTTCCACTTTAACCCACGCTTCAATGAGAACAACAGGAGAGTCATTGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556322.1 ENST00000556438.6 |
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| CDS CCA 72 bp | GGGCGCCATAGGGGCCAGTGGCAGGGTAGGCTCCGGTaGCACTTGGCTGTCCAGAAGATGGGTAGGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GRHRGQWQGRLR*HLAVQKMGRPQ Trigger: CTGGGGCCTACCCATCTTCTGGACAGCCAAGTGCCACCGGAGCCTACCCTGCCACTGGCCCCTATGGCGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556263.1 ENST00000556322.1 ENST00000556438.6 |
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| CDS GCA 72 bp | GCGCACTTCCCGCTACTCAGAGGATTTCTCAGCTCCTaGCGGCAGAGTCCACTCCCTTCCGCCCTGGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: AHFPLLRGFLSS*RQSPLPSALGR Trigger: TCGGCCCAGGGCGGAAGGGAGTGGACTCTGCCGGCAGGAGCTGAGAAATCCTCTGAGTAGCGGGAAGTGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556322.1 |
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| CDS GCA 72 bp | CCGCACTTCCCGCTACTCAGAGGATTTCTCAGCTCCTaGCGGCAGAGTCCACTCCCTTCCGCCCTGGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: PHFPLLRGFLSS*RQSPLPSALGL Trigger: AAGGCCCAGGGCGGAAGGGAGTGGACTCTGCCGGCAGGAGCTGAGAAATCCTCTGAGTAGCGGGAAGTGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS CAA 90 bp | CCCCAGCAGGCTGGTTCCCCCATGCGCCAGGCCATCCTTGAGGGTTaGGGTTTCCAGACCCAGATAACGCATCATGGAGCGCTCGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: PQQAGSPMRQAILEG*GFQTQITHHGALVG Trigger: GCCAACGAGCGCTCCATGATGCGTTATCTGGGTCTGGAAACCCAAACCCTCAAGGATGGCCTGGCGCATGGGGGAACCAGCCTGCTGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000553755.5 |
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| CDS CAA 90 bp | CCCCAGCAGGCTGGTTCCCCCATGCGCCAGGCCATCCTTGAGGGTTaGGGTTTCCAGACCCAGATAACGCATCATGGAGCGCACTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: PQQAGSPMRQAILEG*GFQTQITHHGAHFP Trigger: CGGGAAGTGCGCTCCATGATGCGTTATCTGGGTCTGGAAACCCAAACCCTCAAGGATGGCCTGGCGCATGGGGGAACCAGCCTGCTGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556322.1 |
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| CDS TCA 72 bp | CCTTCCGCCCTGGGCCTTTTGGTGAAAGGGTTACTGTaGGTGAGTCCCAGGCCTCGCTCTGCCTGGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PSALGLLVKGLL*VSPRPRSAWLS Trigger: AGAAAGCCAGGCAGAGCGAGGCCTGGGACTCACTCACAGTAACCCTTTCACCAAAAGGCCCAGGGCGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS CCA 72 bp | CATGGAGCGAAAAATTGTCTGCCATTTTCCGCTCGTTaGCTGGCTCCGGACGGCTGCTGGCGAGGAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: HGAKNCLPFSAR*LAPDGCWRGGA Trigger: AGCACCTCCTCGCCAGCAGCCGTCCGGAGCCAGCCAACGAGCGGAAAATGGCAGACAATTTTTCGCTCCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254301.14 |
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| CDS CAA 72 bp | TCATGGAGCGAAAAATTGTCTGCCATTTTCCGCTCGTaGGCTGGCTCCGGACGGCTGCTGGCGAGGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SWSEKLSAIFRS*AGSGRLLARRC Trigger: GCACCTCCTCGCCAGCAGCCGTCCGGAGCCAGCCAACGAGCGGAAAATGGCAGACAATTTTTCGCTCCATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000254301.14 |
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| CDS CAA 72 bp | GCTGGTTCCCCCATGCGCCAGGCCATCCTTGAGGGTTaGGGTTTCCAGACCCAGATAACGCATCATGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: AGSPMRQAILEG*GFQTQITHHGA Trigger: CGCTCCATGATGCGTTATCTGGGTCTGGAAACCCAAACCCTCAAGGATGGCCTGGCGCATGGGGGAACCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000254301.14 ENST00000553493.5 ENST00000553755.5 ENST00000554715.1 ENST00000556322.1 |
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| CDS CAA 90 bp | CCCCAGCAGGCTGGTTCCCCCATGCGCCAGGCCATCCTTGAGGGTTaGGGTTTCCAGACCCAGATAACGCATCATGGAGCTGGAAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: PQQAGSPMRQAILEG*GFQTQITHHGAGKK Trigger: TTTCTTTCCAGCTCCATGATGCGTTATCTGGGTCTGGAAACCCAAACCCTCAAGGATGGCCTGGCGCATGGGGGAACCAGCCTGCTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS CAA 72 bp | GCTGGTTCCCCCATGCGCCAGGCCATCCTTGAGGGTTaGGGTTTCCAGACCCAGATAACGCATCATGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: AGSPMRQAILEG*GFQTQITHHGA Trigger: AGCTCCATGATGCGTTATCTGGGTCTGGAAACCCAAACCCTCAAGGATGGCCTGGCGCATGGGGGAACCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS GCA 72 bp | CATTGGGCTTCACCGTGCCCAGAATTGTTATCAGCATaGGAGGCACCACTCCCCCAGGCAAAGGCAGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: HWASPCPELLSA*EAPLPQAKAGY Trigger: ATAACCTGCCTTTGCCTGGGGGAGTGGTGCCTCGCATGCTGATAACAATTCTGGGCACGGTGAAGCCCAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556263.1 ENST00000556322.1 ENST00000556438.6 |
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| CDS CAA 72 bp | CTTACCTGTTTGCATTGGGCTTCACCGTGCCCAGAATaGTTATCAGCATGCGAGGCACCACTCCCCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LTCLHWASPCPE*LSACEAPLPQA Trigger: TGCCTGGGGGAGTGGTGCCTCGCATGCTGATAACAATTCTGGGCACGGTGAAGCCCAATGCAAACAGGTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556263.1 |
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| CDS CAA 90 bp | TTTGCTCTCCTTACCTGTTTGCATTGGGCTTCACCGTGCCCAGAATaGTTATCAGCATGCGAGGCACCACTCCCCCAGGCAAAGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: FALLTCLHWASPCPE*LSACEAPLPQAKAG Trigger: ACCTGCCTTTGCCTGGGGGAGTGGTGCCTCGCATGCTGATAACAATTCTGGGCACGGTGAAGCCCAATGCAAACAGGTAAGGAGAGCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556263.1 |
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| CDS CAA 72 bp | CAATTCTGTTTGCATTGGGCTTCACCGTGCCCAGAATaGTTATCAGCATGCGAGGCACCACTCCCCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: QFCLHWASPCPE*LSACEAPLPQA Trigger: TGCCTGGGGGAGTGGTGCCTCGCATGCTGATAACAATTCTGGGCACGGTGAAGCCCAATGCAAACAGAATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556322.1 ENST00000556438.6 |
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| CDS CAA 90 bp | CTGGCTTTCTTCCCAAATCTGCTGCTGGAAAAACAAGGCTCCAGCTaGCAAGCCCTCATTGGACAAATGAGTCCAGGGGAAGCCACGCAG | + |
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Preference number: 6 (lower is better) Translates to: LAFFPNLLLEKQGSS*QALIGQMSPGEATQ Trigger: CTGCGTGGCTTCCCCTGGACTCATTTGTCCAATGAGGGCTTGCAAGCTGGAGCCTTGTTTTTCCAGCAGCAGATTTGGGAAGAAAGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS CAA 90 bp | AATCTAAAGCAATTCTGTTTGCATTGGGCTTCACCGTGCCCAGAATaGTTATCAGCATGCGAGGCACCACTCCCCCAGGCAAAGGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: NLKQFCLHWASPCPE*LSACEAPLPQAKAG Trigger: ACCTGCCTTTGCCTGGGGGAGTGGTGCCTCGCATGCTGATAACAATTCTGGGCACGGTGAAGCCCAATGCAAACAGAATTGCTTTAGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556322.1 ENST00000556438.6 |
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| CDS GCA 72 bp | TTTGCTCTCCTTACCTGTTTGCATTGGGCTTCACCGTaGCCAGAATTGTTATCAGCATGCGAGGCACCACTC | + |
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Preference number: 6 (lower is better) Translates to: FALLTCLHWASP*PELLSACEAPL Trigger: GAGTGGTGCCTCGCATGCTGATAACAATTCTGGGCACGGTGAAGCCCAATGCAAACAGGTAAGGAGAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556263.1 |
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| CDS GCA 72 bp | AATCTAAAGCAATTCTGTTTGCATTGGGCTTCACCGTaGCCAGAATTGTTATCAGCATGCGAGGCACCACTC | + |
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Preference number: 6 (lower is better) Translates to: NLKQFCLHWASP*PELLSACEAPL Trigger: GAGTGGTGCCTCGCATGCTGATAACAATTCTGGGCACGGTGAAGCCCAATGCAAACAGAATTGCTTTAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556322.1 ENST00000556438.6 |
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| CDS GCA 72 bp | TATTCTTGCCTCCCAACGTCTCAGATCAGGGAGGGCTaGATTTTCATAATTAGCTCAAGTCAGGAGTTAGCG | + |
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Preference number: 6 (lower is better) Translates to: YSCLPTSQIREG*IFIISSSQELA Trigger: CGCTAACTCCTGACTTGAGCTAATTATGAAAATGCAGCCCTCCCTGATCTGAGACGTTGGGAGGCAAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS GCA 72 bp | CCGATGATTGTACTGCAACAAGTGAGCATCATTCACTaGAACCTTGAAGTGGTCAGGTTCAACCAGTACTTG | + |
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Preference number: 6 (lower is better) Translates to: PMIVLQQVSIIH*NLEVVRFNQYL Trigger: CAAGTACTGGTTGAACCTGACCACTTCAAGGTTGCAGTGAATGATGCTCACTTGTTGCAGTACAATCATCGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000254301.14 ENST00000556438.6 |
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| CDS GCA 72 bp | ACGCATCATGGAGCGAAAAATTGTCTGCCATTTTCCTaGAGCAAGAATCAGAAGGAATTCCTAACGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: THHGAKNCLPFS*SKNQKEFLTQL Trigger: CAGCTGCGTTAGGAATTCCTTCTGATTCTTGCTGCAGGAAAATGGCAGACAATTTTTCGCTCCATGATGCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000553493.5 |
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| CDS CCA 72 bp | GCAAACAATGACTCTCCTGTTGTTCTCATTGAAGCGTaGGTTAAAGTGGAAGGCAACATCATTCCCTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: ANNDSPVVLIEA*VKVEGNIIPSL Trigger: CAAAGAGGGAATGATGTTGCCTTCCACTTTAACCCACGCTTCAATGAGAACAACAGGAGAGTCATTGTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556322.1 ENST00000556438.6 |
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| CDS CCA 72 bp | AGACTTGTTAATTTTGCTCTCCTTACCTGTTTGCATTaGGCTTCACCGTGCCCAGAATTGTTATCAGCATGC | + |
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Preference number: 6 (lower is better) Translates to: RLVNFALLTCLH*ASPCPELLSAC Trigger: GCATGCTGATAACAATTCTGGGCACGGTGAAGCCCAATGCAAACAGGTAAGGAGAGCAAAATTAACAAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556263.1 |
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| CDS CCA 72 bp | TTTGGGTTTCCAGACCCAGATAACGCATCATGGAGCTaGAAAGAAAGACATACACAATTACGGGACAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: FGFPDPDNASWS*KERHTQLRDRK Trigger: CTTTCTGTCCCGTAATTGTGTATGTCTTTCTTTCCAGCTCCATGATGCGTTATCTGGGTCTGGAAACCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS CAA 90 bp | ACCGACTGTCTTTCTTCCCTTCCCCAGTTATTATCCAGCTTTGTATaGCAAACAATGACTCTCCTGTTGTTCTCATTGAAGCGTGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: TDCLSSLPQLLSSFV*QTMTLLLFSLKRGL Trigger: TAACCCACGCTTCAATGAGAACAACAGGAGAGTCATTGTTTGCAATACAAAGCTGGATAATAACTGGGGAAGGGAAGAAAGACAGTCGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556438.6 |
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| CDS CAA 72 bp | AGATGTTGGGATTACATATACTTTTTCACTTTATTCTaGCCTCCCAACGTCTCAGATCAGGGAGGGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: RCWDYIYFFTLF*PPNVSDQGGLH Trigger: ATGCAGCCCTCCCTGATCTGAGACGTTGGGAGGCAAGAATAAAGTGAAAAAGTATATGTAATCCCAACATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556438.6 |
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| CDS CAA 90 bp | TTATCCAGCTTTGTATTGCAAACAATGACTCTCCTGTTGTTCTCATaGAAGCGTGGGTTAAAGTGGAAGGCAACATCATTCCCTCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: LSSFVLQTMTLLLFS*KRGLKWKATSFPLW Trigger: CCAAAGAGGGAATGATGTTGCCTTCCACTTTAACCCACGCTTCAATGAGAACAACAGGAGAGTCATTGTTTGCAATACAAAGCTGGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556438.6 |
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| CDS CAA 90 bp | CCCCAGTTATTATCCAGCTTTGTATTGCAAACAATGACTCTCCTGTaGTTCTCATTGAAGCGTGGGTTAAAGTGGAAGGCAACATCATTC | + |
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Preference number: 6 (lower is better) Translates to: PQLLSSFVLQTMTLL*FSLKRGLKWKATSF Trigger: GAATGATGTTGCCTTCCACTTTAACCCACGCTTCAATGAGAACAACAGGAGAGTCATTGTTTGCAATACAAAGCTGGATAATAACTGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556438.6 |
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| CDS CCA 72 bp | ACTCTCCTGTTGTTCTCATTGAAGCGTGGGTTAAAGTaGAAGGCAACATCATTCCCTCTTTGGAAATCTAAA | + |
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Preference number: 6 (lower is better) Translates to: TLLLFSLKRGLK*KATSFPLWKSK Trigger: TTTAGATTTCCAAAGAGGGAATGATGTTGCCTTCCACTTTAACCCACGCTTCAATGAGAACAACAGGAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000254301.14 ENST00000553755.5 ENST00000554715.1 ENST00000556322.1 ENST00000556438.6 |
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| CDS CAA 90 bp | TCTTTATTCAAAAACCAATCTACAAATAGAGTAGACTTGTTAATTTaGCTCTCCTTACCTGTTTGCATTGGGCTTCACCGTGCCCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: SLFKNQSTNRVDLLI*LSLPVCIGLHRAQN Trigger: ATTCTGGGCACGGTGAAGCCCAATGCAAACAGGTAAGGAGAGCAAAATTAACAAGTCTACTCTATTTGTAGATTGGTTTTTGAATAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556263.1 |
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| CDS CAA 90 bp | GTAGGCCATTCTTTATTCAAAAACCAATCTACAAATAGAGTAGACTaGTTAATTTTGCTCTCCTTACCTGTTTGCATTGGGCTTCACCGT | + |
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Preference number: 6 (lower is better) Translates to: VGHSLFKNQSTNRVD*LILLSLPVCIGLHR Trigger: ACGGTGAAGCCCAATGCAAACAGGTAAGGAGAGCAAAATTAACAAGTCTACTCTATTTGTAGATTGGTTTTTGAATAAAGAATGGCCTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556263.1 |
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| CDS CAA 72 bp | AAAAACCAATCTACAAATAGAGTAGACTTGTTAATTTaGCTCTCCTTACCTGTTTGCATTGGGCTTCACCGT | + |
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Preference number: 6 (lower is better) Translates to: KNQSTNRVDLLI*LSLPVCIGLHR Trigger: ACGGTGAAGCCCAATGCAAACAGGTAAGGAGAGCAAAATTAACAAGTCTACTCTATTTGTAGATTGGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556263.1 |
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