Pregenerated sensors for LEMD1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000224717Ensembl transcript IDs: ENST00000442318.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | GCGGCGGCGCCGCAGCTTTTGTCTCCCGCCCGCCGGGCTGCGAGGTaGGGGCGCTTAGGCGCGAAGTTGCAGCTCCGACGCGCTGCTCCG | + |
Preference number: 5 (lower is better) Translates to: AAAPQLLSPARRAAR*GRLGAKLQLRRAAP Trigger: CGGAGCAGCGCGTCGGAGCTGCAACTTCGCGCCTAAGCGCCCGCACCTCGCAGCCCGGCGGGCGGGAGACAAAAGCTGCGGCGCCGCCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS TCA 90 bp | CGGAGTCATCCGCAGAGGTTAAAGGGACCCCGAAGATTTGTGCATTaGTTGGGTACCTCGGCGGGGTGTGTGTGCGCGCGCGTGTGTGCG | + |
Preference number: 5 (lower is better) Translates to: RSHPQRLKGPRRFVH*LGTSAGCVCARVCA Trigger: CGCACACACGCGCGCGCACACACACCCCGCCGAGGTACCCAATCAATGCACAAATCTTCGGGGTCCCTTTAACCTCTGCGGATGACTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS GCA 90 bp | AGGCGAGAGGGCTTCATGACCAAGCGTGCAGGCTCTGGGTCAGACTaGCTGGGTTGGAATCCCAGCCTGAGCACGGAGCCTTGTGACCTT | + |
Preference number: 5 (lower is better) Translates to: RREGFMTKRAGSGSD*LGWNPSLSTEPCDL Trigger: AAGGTCACAAGGCTCCGTGCTCAGGCTGGGATTCCAACCCAGGCAGTCTGACCCAGAGCCTGCACGCTTGGTCATGAAGCCCTCTCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS GCA 90 bp | CTGTGTAGCTCAGGAGTTATGGGCCAGCCGAGACAGGGCTTTCAGTaGACTTGGCCCAACTTGTCAGTCACCTCCTGGGGCCGGTTGCAT | + |
Preference number: 5 (lower is better) Translates to: LCSSGVMGQPRQGFQ*TWPNLSVTSWGRLH Trigger: ATGCAACCGGCCCCAGGAGGTGACTGACAAGTTGGGCCAAGTGCACTGAAAGCCCTGTCTCGGCTGGCCCATAACTCCTGAGCTACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 90 bp | TGCTGGCTCACGGGGTCCTTAGGGGTCTGTGTAGCTCAGGAGTTATaGGCCAGCCGAGACAGGGCTTTCAGTGCACTTGGCCCAACTTGT | + |
Preference number: 5 (lower is better) Translates to: CWLTGSLGVCVAQEL*ASRDRAFSALGPTC Trigger: ACAAGTTGGGCCAAGTGCACTGAAAGCCCTGTCTCGGCTGGCCCATAACTCCTGAGCTACACAGACCCCTAAGGACCCCGTGAGCCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 90 bp | AGCTCAGGAGTTATGGGCCAGCCGAGACAGGGCTTTCAGTGCACTTaGCCCAACTTGTCAGTCACCTCCTGGGGCCGGTTGCATGGAAAA | + |
Preference number: 5 (lower is better) Translates to: SSGVMGQPRQGFQCT*PNLSVTSWGRLHGK Trigger: TTTTCCATGCAACCGGCCCCAGGAGGTGACTGACAAGTTGGGCCAAGTGCACTGAAAGCCCTGTCTCGGCTGGCCCATAACTCCTGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS TCA 90 bp | CCAACTGGCCAGGAAAGGAGGACTACAGGGAGGATGCCGCATGTCTaGGCAGTTTGTGTCCCTTCTCAGAAGACGTTGTGCCCATGTGCC | + |
Preference number: 5 (lower is better) Translates to: PTGQERRTTGRMPHV*AVCVPSQKTLCPCA Trigger: GGCACATGGGCACAACGTCTTCTGAGAAGGGACACAAACTGCTCAGACATGCGGCATCCTCCCTGTAGTCCTCCTTTCCTGGCCAGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS GCA 90 bp | TGTCTGAGCAGTTTGTGTCCCTTCTCAGAAGACGTTGTGCCCATGTaGCAGGGCAGTGCAATGACAGAGGGTGGTGGGGTAGAAGCTCTG | + |
Preference number: 5 (lower is better) Translates to: CLSSLCPFSEDVVPM*QGSAMTEGGGVEAL Trigger: CAGAGCTTCTACCCCACCACCCTCTGTCATTGCACTGCCCTGGCACATGGGCACAACGTCTTCTGAGAAGGGACACAAACTGCTCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 90 bp | TGCTGGAAGCTGTTCAGAACTGAAAGGCAGAGATCGTTCTCCAACTaGCCAGGAAAGGAGGACTACAGGGAGGATGCCGCATGTCTGAGC | + |
Preference number: 5 (lower is better) Translates to: CWKLFRTERQRSFSN*PGKEDYREDAACLS Trigger: GCTCAGACATGCGGCATCCTCCCTGTAGTCCTCCTTTCCTGGCCAGTTGGAGAACGATCTCTGCCTTTCAGTTCTGAACAGCTTCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 90 bp | TGGGACACTTCCCTTCTGTTGATGCAGCCCTGTGGTGGGCTTTTCTaGAAGCCTCACCACACTGGTGTTCAACCTGAGCTTACTGTCAGG | + |
Preference number: 5 (lower is better) Translates to: WDTSLLLMQPCGGLF*KPHHTGVQPELTVR Trigger: CCTGACAGTAAGCTCAGGTTGAACACCAGTGTGGTGAGGCTTCCAGAAAAGCCCACCACAGGGCTGCATCAACAGAAGGGAAGTGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS GCA 90 bp | TTTGTGTCCCTTCTCAGAAGACGTTGTGCCCATGTGCCAGGGCAGTaGAATGACAGAGGGTGGTGGGGTAGAAGCTCTGATTTCTCTGAA | + |
Preference number: 5 (lower is better) Translates to: FVSLLRRRCAHVPGQ*NDRGWWGRSSDFSE Trigger: TTCAGAGAAATCAGAGCTTCTACCCCACCACCCTCTGTCATTGCACTGCCCTGGCACATGGGCACAACGTCTTCTGAGAAGGGACACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS GCA 90 bp | ACACAAGTTGTGTACATGTTTCCTCCAGGGTTTTCCTGGTCACATTaGATACTCAGGCGAGAGGGCTTCATGACCAAGCGTGCAGGCTCT | + |
Preference number: 5 (lower is better) Translates to: TQVVYMFPPGFSWSH*ILRREGFMTKRAGS Trigger: AGAGCCTGCACGCTTGGTCATGAAGCCCTCTCGCCTGAGTATGCAATGTGACCAGGAAAACCCTGGAGGAAACATGTACACAACTTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 90 bp | AGACGTTGTGCCCATGTGCCAGGGCAGTGCAATGACAGAGGGTGGTaGGGTAGAAGCTCTGATTTCTCTGAATTCTCCATTAATTCCTTG | + |
Preference number: 5 (lower is better) Translates to: RRCAHVPGQCNDRGW*GRSSDFSEFSINSL Trigger: CAAGGAATTAATGGAGAATTCAGAGAAATCAGAGCTTCTACCCCACCACCCTCTGTCATTGCACTGCCCTGGCACATGGGCACAACGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 90 bp | AGAAGACGTTGTGCCCATGTGCCAGGGCAGTGCAATGACAGAGGGTaGTGGGGTAGAAGCTCTGATTTCTCTGAATTCTCCATTAATTCC | + |
Preference number: 5 (lower is better) Translates to: RRRCAHVPGQCNDRG*WGRSSDFSEFSINS Trigger: GGAATTAATGGAGAATTCAGAGAAATCAGAGCTTCTACCCCACCACCCTCTGTCATTGCACTGCCCTGGCACATGGGCACAACGTCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS TCA 90 bp | AATCCAAAATGTTCCCTATGGGGCATGCTGGAAGCTGTTCAGAACTaGAAGGCAGAGATCGTTCTCCAACTGGCCAGGAAAGGAGGACTA | + |
Preference number: 5 (lower is better) Translates to: NPKCSLWGMLEAVQN*KAEIVLQLARKGGL Trigger: TAGTCCTCCTTTCCTGGCCAGTTGGAGAACGATCTCTGCCTTTCAGTTCTGAACAGCTTCCAGCATGCCCCATAGGGAACATTTTGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS GCA 90 bp | AACTGGTGTTTTACCTCTTCCTCAGATGTCCATCACTATCCCTGTTaGTCTCCTCTTTATCCTCTCCGGCCTGGCTCTGTCCCTCTTATA | + |
Preference number: 5 (lower is better) Translates to: NWCFTSSSDVHHYPC*SPLYPLRPGSVPLI Trigger: TATAAGAGGGACAGAGCCAGGCCGGAGAGGATAAAGAGGAGAGCAACAGGGATAGTGATGGACATCTGAGGAAGAGGTAAAACACCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 90 bp | AGTAAGGAAACACAAGTTGTGTACATGTTTCCTCCAGGGTTTTCCTaGTCACATTGCATACTCAGGCGAGAGGGCTTCATGACCAAGCGT | + |
Preference number: 5 (lower is better) Translates to: SKETQVVYMFPPGFS*SHCILRREGFMTKR Trigger: ACGCTTGGTCATGAAGCCCTCTCGCCTGAGTATGCAATGTGACCAGGAAAACCCTGGAGGAAACATGTACACAACTTGTGTTTCCTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 90 bp | TATTTTCACCTACATGCTTCTTGGTTCTGTCTGTTACATCCCCTATaGACACACACACACACACACACACACACACACACACTCCTCTTT | + |
Preference number: 5 (lower is better) Translates to: YFHLHASWFCLLHPL*THTHTHTHTHTLLF Trigger: AAAGAGGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCATAGGGGATGTAACAGACAGAACCAAGAAGCATGTAGGTGAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 90 bp | TCTCCCGCCCGCCGGGCTGCGAGGTGCGGGCGCTTAGGCGCGAAGTaGCAGCTCCGACGCGCTGCTCCGGAATGCCGGCTGACCGCGGCC | + |
Preference number: 6 (lower is better) Translates to: SPARRAARCGRLGAK*QLRRAAPECRLTAA Trigger: GGCCGCGGTCAGCCGGCATTCCGGAGCAGCGCGTCGGAGCTGCAACTTCGCGCCTAAGCGCCCGCACCTCGCAGCCCGGCGGGCGGGAGA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS GCA 72 bp | CGGGCGCTTAGGCGCGAAGTTGCAGCTCCGACGCGCTaGTCCGGAATGCCGGCTGACCGCGGCCGTCGGGGG | + |
Preference number: 6 (lower is better) Translates to: RALRREVAAPTR*SGMPADRGRRG Trigger: CCCCCGACGGCCGCGGTCAGCCGGCATTCCGGAGCAGCGCGTCGGAGCTGCAACTTCGCGCCTAAGCGCCCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 72 bp | CGCCGGGCTGCGAGGTGCGGGCGCTTAGGCGCGAAGTaGCAGCTCCGACGCGCTGCTCCGGAATGCCGGCTG | + |
Preference number: 6 (lower is better) Translates to: RRAARCGRLGAK*QLRRAAPECRL Trigger: CAGCCGGCATTCCGGAGCAGCGCGTCGGAGCTGCAACTTCGCGCCTAAGCGCCCGCACCTCGCAGCCCGGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS GCA 72 bp | CCGCAGCTTTTGTCTCCCGCCCGCCGGGCTGCGAGGTaGGGGCGCTTAGGCGCGAAGTTGCAGCTCCGACGC | + |
Preference number: 6 (lower is better) Translates to: PQLLSPARRAAR*GRLGAKLQLRR Trigger: GCGTCGGAGCTGCAACTTCGCGCCTAAGCGCCCGCACCTCGCAGCCCGGCGGGCGGGAGACAAAAGCTGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 72 bp | CAGGCGAGAGGGCTTCATGACCAAGCGTGCAGGCTCTaGGTCAGACTGCCTGGGTTGGAATCCCAGCCTGAG | + |
Preference number: 6 (lower is better) Translates to: QARGLHDQACRL*VRLPGLESQPE Trigger: CTCAGGCTGGGATTCCAACCCAGGCAGTCTGACCCAGAGCCTGCACGCTTGGTCATGAAGCCCTCTCGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS TCA 72 bp | CCGCAGAGGTTAAAGGGACCCCGAAGATTTGTGCATTaGTTGGGTACCTCGGCGGGGTGTGTGTGCGCGCGC | + |
Preference number: 6 (lower is better) Translates to: PQRLKGPRRFVH*LGTSAGCVCAR Trigger: GCGCGCGCACACACACCCCGCCGAGGTACCCAATCAATGCACAAATCTTCGGGGTCCCTTTAACCTCTGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 72 bp | GTTATGGGCCAGCCGAGACAGGGCTTTCAGTGCACTTaGCCCAACTTGTCAGTCACCTCCTGGGGCCGGTTG | + |
Preference number: 6 (lower is better) Translates to: VMGQPRQGFQCT*PNLSVTSWGRL Trigger: CAACCGGCCCCAGGAGGTGACTGACAAGTTGGGCCAAGTGCACTGAAAGCCCTGTCTCGGCTGGCCCATAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS TCA 72 bp | CCTGGTCACATTGCATACTCAGGCGAGAGGGCTTCATaGCCAAGCGTGCAGGCTCTGGGTCAGACTGCCTGG | + |
Preference number: 6 (lower is better) Translates to: PGHIAYSGERAS*PSVQALGQTAW Trigger: CCAGGCAGTCTGACCCAGAGCCTGCACGCTTGGTCATGAAGCCCTCTCGCCTGAGTATGCAATGTGACCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS GCA 72 bp | TCAGGAGTTATGGGCCAGCCGAGACAGGGCTTTCAGTaGACTTGGCCCAACTTGTCAGTCACCTCCTGGGGC | + |
Preference number: 6 (lower is better) Translates to: SGVMGQPRQGFQ*TWPNLSVTSWG Trigger: GCCCCAGGAGGTGACTGACAAGTTGGGCCAAGTGCACTGAAAGCCCTGTCTCGGCTGGCCCATAACTCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS GCA 72 bp | GCTCCCAGCCTCCAGCTTGCTGGATTTATGGCTCTCTaGTGGCTCACGGGGTCCTTAGGGGTCTGTGTAGCT | + |
Preference number: 6 (lower is better) Translates to: APSLQLAGFMAL*WLTGSLGVCVA Trigger: AGCTACACAGACCCCTAAGGACCCCGTGAGCCAGCAGAGAGCCATAAATCCAGCAAGCTGGAGGCTGGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 72 bp | ACGGGGTCCTTAGGGGTCTGTGTAGCTCAGGAGTTATaGGCCAGCCGAGACAGGGCTTTCAGTGCACTTGGC | + |
Preference number: 6 (lower is better) Translates to: TGSLGVCVAQEL*ASRDRAFSALG Trigger: GCCAAGTGCACTGAAAGCCCTGTCTCGGCTGGCCCATAACTCCTGAGCTACACAGACCCCTAAGGACCCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 72 bp | CCCAGCCTCCAGCTTGCTGGATTTATGGCTCTCTGCTaGCTCACGGGGTCCTTAGGGGTCTGTGTAGCTCAG | + |
Preference number: 6 (lower is better) Translates to: PSLQLAGFMALC*LTGSLGVCVAQ Trigger: CTGAGCTACACAGACCCCTAAGGACCCCGTGAGCCAGCAGAGAGCCATAAATCCAGCAAGCTGGAGGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 72 bp | CAGCCGAGACAGGGCTTTCAGTGCACTTGGCCCAACTaGTCAGTCACCTCCTGGGGCCGGTTGCATGGAAAA | + |
Preference number: 6 (lower is better) Translates to: QPRQGFQCTWPN*SVTSWGRLHGK Trigger: TTTTCCATGCAACCGGCCCCAGGAGGTGACTGACAAGTTGGGCCAAGTGCACTGAAAGCCCTGTCTCGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 90 bp | CCAGGAAAGGAGGACTACAGGGAGGATGCCGCATGTCTGAGCAGTTaGTGTCCCTTCTCAGAAGACGTTGTGCCCATGTGCCAGGGCAGT | + |
Preference number: 6 (lower is better) Translates to: PGKEDYREDAACLSS*CPFSEDVVPMCQGS Trigger: ACTGCCCTGGCACATGGGCACAACGTCTTCTGAGAAGGGACACAAACTGCTCAGACATGCGGCATCCTCCCTGTAGTCCTCCTTTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS TCA 72 bp | AGGGTTCTGTCCTGGTGTGGGACACTTCCCTTCTGTTaGTGCAGCCCTGTGGTGGGCTTTTCTGGAAGCCTC | + |
Preference number: 6 (lower is better) Translates to: RVLSWCGTLPFC*CSPVVGFSGSL Trigger: GAGGCTTCCAGAAAAGCCCACCACAGGGCTGCATCAACAGAAGGGAAGTGTCCCACACCAGGACAGAACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS GCA 72 bp | AGTTTGTGTCCCTTCTCAGAAGACGTTGTGCCCATGTaGCAGGGCAGTGCAATGACAGAGGGTGGTGGGGTA | + |
Preference number: 6 (lower is better) Translates to: SLCPFSEDVVPM*QGSAMTEGGGV Trigger: TACCCCACCACCCTCTGTCATTGCACTGCCCTGGCACATGGGCACAACGTCTTCTGAGAAGGGACACAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 72 bp | GAGGACTACAGGGAGGATGCCGCATGTCTGAGCAGTTaGTGTCCCTTCTCAGAAGACGTTGTGCCCATGTGC | + |
Preference number: 6 (lower is better) Translates to: EDYREDAACLSS*CPFSEDVVPMC Trigger: GCACATGGGCACAACGTCTTCTGAGAAGGGACACAAACTGCTCAGACATGCGGCATCCTCCCTGTAGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 90 bp | GAATGGTCTAAGGGTTCTGTCCTGGTGTGGGACACTTCCCTTCTGTaGATGCAGCCCTGTGGTGGGCTTTTCTGGAAGCCTCACCACACT | + |
Preference number: 6 (lower is better) Translates to: EWSKGSVLVWDTSLL*MQPCGGLFWKPHHT Trigger: AGTGTGGTGAGGCTTCCAGAAAAGCCCACCACAGGGCTGCATCAACAGAAGGGAAGTGTCCCACACCAGGACAGAACCCTTAGACCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS TCA 72 bp | CAGGAAAGGAGGACTACAGGGAGGATGCCGCATGTCTaGGCAGTTTGTGTCCCTTCTCAGAAGACGTTGTGC | + |
Preference number: 6 (lower is better) Translates to: QERRTTGRMPHV*AVCVPSQKTLC Trigger: GCACAACGTCTTCTGAGAAGGGACACAAACTGCTCAGACATGCGGCATCCTCCCTGTAGTCCTCCTTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 72 bp | TGTGCCCATGTGCCAGGGCAGTGCAATGACAGAGGGTaGTGGGGTAGAAGCTCTGATTTCTCTGAATTCTCC | + |
Preference number: 6 (lower is better) Translates to: CAHVPGQCNDRG*WGRSSDFSEFS Trigger: GGAGAATTCAGAGAAATCAGAGCTTCTACCCCACCACCCTCTGTCATTGCACTGCCCTGGCACATGGGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 72 bp | TCCCTTCTGTTGATGCAGCCCTGTGGTGGGCTTTTCTaGAAGCCTCACCACACTGGTGTTCAACCTGAGCTT | + |
Preference number: 6 (lower is better) Translates to: SLLLMQPCGGLF*KPHHTGVQPEL Trigger: AAGCTCAGGTTGAACACCAGTGTGGTGAGGCTTCCAGAAAAGCCCACCACAGGGCTGCATCAACAGAAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CCA 72 bp | GCCCATGTGCCAGGGCAGTGCAATGACAGAGGGTGGTaGGGTAGAAGCTCTGATTTCTCTGAATTCTCCATT | + |
Preference number: 6 (lower is better) Translates to: AHVPGQCNDRGW*GRSSDFSEFSI Trigger: AATGGAGAATTCAGAGAAATCAGAGCTTCTACCCCACCACCCTCTGTCATTGCACTGCCCTGGCACATGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 90 bp | AACACAAGTTGTGTACATGTTTCCTCCAGGGTTTTCCTGGTCACATaGCATACTCAGGCGAGAGGGCTTCATGACCAAGCGTGCAGGCTC | + |
Preference number: 6 (lower is better) Translates to: NTSCVHVSSRVFLVT*HTQARGLHDQACRL Trigger: GAGCCTGCACGCTTGGTCATGAAGCCCTCTCGCCTGAGTATGCAATGTGACCAGGAAAACCCTGGAGGAAACATGTACACAACTTGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS TCA 72 bp | TGTTCCCTATGGGGCATGCTGGAAGCTGTTCAGAACTaGAAGGCAGAGATCGTTCTCCAACTGGCCAGGAAA | + |
Preference number: 6 (lower is better) Translates to: CSLWGMLEAVQN*KAEIVLQLARK Trigger: TTTCCTGGCCAGTTGGAGAACGATCTCTGCCTTTCAGTTCTGAACAGCTTCCAGCATGCCCCATAGGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS TCA 72 bp | CAGAGGCAGTCCAATCCAGCCCCTTTGTTGTACAGATaGGAAAACCACAGTCCCTCCTGCCATTCCTCTGTT | + |
Preference number: 6 (lower is better) Translates to: QRQSNPAPLLYR*ENHSPSCHSSV Trigger: AACAGAGGAATGGCAGGAGGGACTGTGGTTTTCTCATCTGTACAACAAAGGGGCTGGATTGGACTGCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS GCA 72 bp | TTTCTCTCTCCAGCTCACATAGCAATCAGATCAGGCTaGTTTTCCCCAGTGCAATCAGTGAGCTCCCAGCCT | + |
Preference number: 6 (lower is better) Translates to: FLSPAHIAIRSG*FSPVQSVSSQP Trigger: AGGCTGGGAGCTCACTGATTGCACTGGGGAAAAGCAGCCTGATCTGATTGCTATGTGAGCTGGAGAGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 72 bp | TGTGTACATGTTTCCTCCAGGGTTTTCCTGGTCACATaGCATACTCAGGCGAGAGGGCTTCATGACCAAGCG | + |
Preference number: 6 (lower is better) Translates to: CVHVSSRVFLVT*HTQARGLHDQA Trigger: CGCTTGGTCATGAAGCCCTCTCGCCTGAGTATGCAATGTGACCAGGAAAACCCTGGAGGAAACATGTACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 90 bp | ACTGGAAGCTACAGCAGAGAATCGGACAAGGAGGGAAGAAAGAGATaGGTGAGGGGGAGAGAGAGAGAAAGAGAGAGAGAGACACAAAGG | + |
Preference number: 6 (lower is better) Translates to: TGSYSRESDKEGRKR*VRGRERERERETQR Trigger: CCTTTGTGTCTCTCTCTCTCTTTCTCTCTCTCTCCCCCTCACCAATCTCTTTCTTCCCTCCTTGTCCGATTCTCTGCTGTAGCTTCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 90 bp | CAACTGGTGTTTTACCTCTTCCTCAGATGTCCATCACTATCCCTGTaGCTCTCCTCTTTATCCTCTCCGGCCTGGCTCTGTCCCTCTTAT | + |
Preference number: 6 (lower is better) Translates to: QLVFYLFLRCPSLSL*LSSLSSPAWLCPSY Trigger: ATAAGAGGGACAGAGCCAGGCCGGAGAGGATAAAGAGGAGAGCAACAGGGATAGTGATGGACATCTGAGGAAGAGGTAAAACACCAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 72 bp | TTTTACCTCTTCCTCAGATGTCCATCACTATCCCTGTaGCTCTCCTCTTTATCCTCTCCGGCCTGGCTCTGT | + |
Preference number: 6 (lower is better) Translates to: FYLFLRCPSLSL*LSSLSSPAWLC Trigger: ACAGAGCCAGGCCGGAGAGGATAAAGAGGAGAGCAACAGGGATAGTGATGGACATCTGAGGAAGAGGTAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 90 bp | ACACACACACACACACTCCTCTTTCCCAGAAGACAGATGTGTATTTaGGACAATCTACTCCATGGGGACTATCTGTTTTCCACTCTTACC | + |
Preference number: 6 (lower is better) Translates to: THTHTLLFPRRQMCI*DNLLHGDYLFSTLT Trigger: GGTAAGAGTGGAAAACAGATAGTCCCCATGGAGTAGATTGTCCAAAATACACATCTGTCTTCTGGGAAAGAGGAGTGTGTGTGTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 72 bp | TTCAACCTGAGCTTACTGTCAGGTGAAGCCCCTAAATaGATGCTTTCTGATCCTAACTCTCTATTCTATTTT | + |
Preference number: 6 (lower is better) Translates to: FNLSLLSGEAPK*MLSDPNSLFYF Trigger: AAAATAGAATAGAGAGTTAGGATCAGAAAGCATCAATTTAGGGGCTTCACCTGACAGTAAGCTCAGGTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442318.1 |
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CDS CAA 90 bp | ACACTGGTGTTCAACCTGAGCTTACTGTCAGGTGAAGCCCCTAAATaGATGCTTTCTGATCCTAACTCTCTATTCTATTTTTATATAATG | + |
Preference number: 6 (lower is better) Translates to: TLVFNLSLLSGEAPK*MLSDPNSLFYFYIM Trigger: CATTATATAAAAATAGAATAGAGAGTTAGGATCAGAAAGCATCAATTTAGGGGCTTCACCTGACAGTAAGCTCAGGTTGAACACCAGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000442318.1 |