RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LDLRAD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000168675

Ensembl transcript IDs: ENST00000359446.10, ENST00000361303.7, ENST00000399848.7, ENST00000435606.1, ENST00000585931.5, ENST00000586207.5, ENST00000586222.2, ENST00000586765.1, ENST00000587344.2, ENST00000587440.1, ENST00000587600.1, ENST00000587757.5, ENST00000587905.6, ENST00000590115.1, ENST00000590308.1, ENST00000590371.5, ENST00000592657.1, ENST00000592812.1, ENST00000592991.1, ENST00000593236.1, ENST00000610087.2, ENST00000676672.1, ENST00000676773.1, ENST00000676815.1, ENST00000676891.1, ENST00000677055.1, ENST00000677304.1, ENST00000677387.1, ENST00000677744.1, ENST00000677867.1, ENST00000677910.1, ENST00000678223.1, ENST00000678309.1, ENST00000678400.1, ENST00000678459.1, ENST00000678556.1, ENST00000679091.1, ENST00000679167.1, ENST00000679177.1, ENST00000679303.1

Found 2469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGAGATGAACGTGGAGGGCAGGTGTGACCCAGGCGCGGCTACCTaGTACCGGCCCAAGGCCAGGTGCCTTGGACGGCACGGGCAGGCG +
Preference number: 1 (lower is better)
Translates to: GEMNVEGRCDPGAAT*YRPKARCLGRHGQA
Trigger: CGCCTGCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTGGGTCACACCTGCCCTCCACGTTCATCTCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 90 bp GTCCCTATGATCTGTAGGTGGAGAGATGAACGTGGAGGGCAGGTGTaGCCCAGGCGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCT +
Preference number: 1 (lower is better)
Translates to: VPMICRWRDERGGQV*PRRGYLIPAQGQVP
Trigger: AGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTGGGTCACACCTGCCCTCCACGTTCATCTCTCCACCTACAGATCATAGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 90 bp GGGCAGCAGCCCGTGATGACTGGACGGACTAGGGAATCCCTCGAATaGAGACTCCACGAGCCCGTCCAGCTGGAGTGGCATCTCCTCACT +
Preference number: 1 (lower is better)
Translates to: GQQPVMTGRTRESLE*RLHEPVQLEWHLLT
Trigger: AGTGAGGAGATGCCACTCCAGCTGGACGGGCTCGTGGAGTCTGCATTCGAGGGATTCCCTAGTCCGTCCAGTCATCACGGGCTGCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 90 bp TGTCTCCAGGGTTGGGGAGGGTCCTTCTGGCCCCAAGCCAATCTCTaGCCTGAGAGCTGGTGTCTCTCCAGCAGAGGCCTTCCAACTGTC +
Preference number: 1 (lower is better)
Translates to: CLQGWGGSFWPQANL*PESWCLSSRGLPTV
Trigger: GACAGTTGGAAGGCCTCTGCTGGAGAGACACCAGCTCTCAGGGCAGAGATTGGCTTGGGGCCAGAAGGACCCTCCCCAACCCTGGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 90 bp CTGCATTGTTCTGCTGAAACTGCAGTCTGCTGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGAAAGAGGCGCCTGGGTGGTGGCCCA +
Preference number: 1 (lower is better)
Translates to: LHCSAETAVCCPCVR*CAGDGGKRRLGGGP
Trigger: TGGGCCACCACCCAGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CCA 90 bp ACGATCCACGCAGAACATTGCAATGTCACAGAAATGGCCGCCCACTaGCCACGAAGCCCTGGCCCCACCCTGCGAGGTCACTTCCTACCC +
Preference number: 1 (lower is better)
Translates to: TIHAEHCNVTEMAAH*PRSPGPTLRGHFLP
Trigger: GGGTAGGAAGTGACCTCGCAGGGTGGGGCCAGGGCTTCGTGGCCAGTGGGCGGCCATTTCTGTGACATTGCAATGTTCTGCGTGGATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 90 bp AATGTCTCTGAGCCTGCCAGTGACCAACGCCATGAGCCGGTCCTTTaGGGGAGGGCTTCGGACTGGGTGCCGGGTGTCTCTCTACTAGCA +
Preference number: 1 (lower is better)
Translates to: NVSEPASDQRHEPVL*GRASDWVPGVSLLA
Trigger: TGCTAGTAGAGAGACACCCGGCACCCAGTCCGAAGCCCTCCCTCAAAGGACCGGCTCATGGCGTTGGTCACTGGCAGGCTCAGAGACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR TCA 90 bp TGTCAAATATGGTTCGGTTGGGTGGGGCCCTCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAGGGTCCCGGAGCTGCAGGGTGCAGG +
Preference number: 1 (lower is better)
Translates to: CQIWFGWVGPSRTLG*VPSAVQGPGAAGCR
Trigger: CCTGCACCCTGCAGCTCCGGGACCCTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATATTTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR GCA 90 bp CATTGTTCTGCTGAAACTGCAGTCTGCTGCCCCTGTGTGCGTTGCTaGGCTGGTGATGGAGGAAAGAGGCGCCTGGGTGGTGGCCCATCA +
Preference number: 1 (lower is better)
Translates to: HCSAETAVCCPCVRC*AGDGGKRRLGGGPS
Trigger: TGATGGGCCACCACCCAGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGCAGAACAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR GCA 90 bp GCTCTCTGCATTGTTCTGCTGAAACTGCAGTCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATGGAGGAAAGAGGCGCCTGGGTGGTG +
Preference number: 1 (lower is better)
Translates to: ALCIVLLKLQSAAPV*VAALVMEERGAWVV
Trigger: CACCACCCAGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CCA 90 bp ACATTGCAATGTCACAGAAATGGCCGCCCACTGGCCACGAAGCCCTaGCCCCACCCTGCGAGGTCACTTCCTACCCTACCAACAGCAGCA +
Preference number: 1 (lower is better)
Translates to: TLQCHRNGRPLATKP*PHPARSLPTLPTAA
Trigger: TGCTGCTGTTGGTAGGGTAGGAAGTGACCTCGCAGGGTGGGGCCAGGGCTTCGTGGCCAGTGGGCGGCCATTTCTGTGACATTGCAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 90 bp GGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAATCAGACCAGGTTCCCAGGCTTCCT +
Preference number: 1 (lower is better)
Translates to: GGAQRPLPFLVSFSS*SARWKESDQVPRLP
Trigger: AGGAAGCCTGGGAACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR TCA 90 bp ATGATGATTTGGGCGAACTCCAGCTCCGTAACAGCGATGGAGCCGTaGACAGAGCACTCCCTGGAGAGGCCCCCATTTAGCTCTGCGGCC +
Preference number: 1 (lower is better)
Translates to: MMIWANSSSVTAMEP*TEHSLERPPFSSAA
Trigger: GGCCGCAGAGCTAAATGGGGGCCTCTCCAGGGAGTGCTCTGTTCACGGCTCCATCGCTGTTACGGAGCTGGAGTTCGCCCAAATCATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677304.1
3UTR GCA 90 bp AGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTaGCTGACAGAGGAAGAGAGGCTAATCTGGAGAGCCAGTGAACCT +
Preference number: 1 (lower is better)
Translates to: SPCQQGPMGTRAPHL*LTEEERLIWRASEP
Trigger: AGGTTCACTGGCTCTCCAGATTAGCCTCTCTTCCTCTGTCAGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR CCA 90 bp GAATCCAGAAAACGATCCACGCAGAACATTGCAATGTCACAGAAATaGCCGCCCACTGGCCACGAAGCCCTGGCCCCACCCTGCGAGGTC +
Preference number: 1 (lower is better)
Translates to: ESRKRSTQNIAMSQK*PPTGHEALAPPCEV
Trigger: GACCTCGCAGGGTGGGGCCAGGGCTTCGTGGCCAGTGGGCGGCCATTTCTGTGACATTGCAATGTTCTGCGTGGATCGTTTTCTGGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 90 bp CCCACCCTCCCACATGTTGGCTGGGCCTGCTTGGCTACTGCACAGTaGACTTGTCGCATTTCCTTCCTGTCTCTGTCCTCCTCAGCAGAG +
Preference number: 1 (lower is better)
Translates to: PTLPHVGWACLATAQ*TCRISFLSLSSSAE
Trigger: CTCTGCTGAGGAGGACAGAGACAGGAAGGAAATGCGACAAGTTCACTGTGCAGTAGCCAAGCAGGCCCAGCCAACATGTGGGAGGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 90 bp CACACTAGGAACTCCAAGAGTCACAGGGCGAAGAGCACTGCGGCCTaGACTTGGATCTGGTCACCAGTGACATCGTCCAGTCCTCGGCTT +
Preference number: 1 (lower is better)
Translates to: HTRNSKSHRAKSTAA*TWIWSPVTSSSPRL
Trigger: AAGCCGAGGACTGGACGATGTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGTGCTCTTCGCCCTGTGACTCTTGGAGTTCCTAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR CCA 90 bp ACACGGGCTCCTCATCTTTGCCTGACAGAGGAAGAGAGGCTAATCTaGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGAGGG +
Preference number: 1 (lower is better)
Translates to: TRAPHLCLTEEERLI*RASEPSGCLQGWGG
Trigger: CCCTCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTCTTCCTCTGTCAGGCAAAGATGAGGAGCCCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR CCA 90 bp CCATTGTCTGTTCACATCTCTGTGATCTGTAGCGGTGCTGGCAGCTaGCGGTGGTGGAAATGGCGAACGGTAAGCCACGCAGCTGCTGAG +
Preference number: 1 (lower is better)
Translates to: PLSVHISVICSGAGS*RWWKWRTVSHAAAE
Trigger: CTCAGCAGCTGCGTGGCTTACCGTTCGCCATTTCCACCACCGCCAGCTGCCAGCACCGCTACAGATCACAGAGATGTGAACAGACAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAATCAGACC +
Preference number: 1 (lower is better)
Translates to: EQHCAQEGPSGRFPS*FLSPAEVHVGRNQT
Trigger: GGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR TCA 90 bp TCATCTTTGCCTGACAGAGGAAGAGAGGCTAATCTGGAGAGCCAGTaGACCTTCAGGGTGTCTCCAGGGTTGGGGAGGGTCCTTCTGGCC +
Preference number: 1 (lower is better)
Translates to: SSLPDRGREANLESQ*TFRVSPGLGRVLLA
Trigger: GGCCAGAAGGACCCTCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTCTTCCTCTGTCAGGCAAAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 90 bp GTACTATTGTGCTCTCTGCATTGTTCTGCTGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGCGCTGGTGATGGAGGAAAGAGGCGC +
Preference number: 1 (lower is better)
Translates to: VLLCSLHCSAETAVC*PCVRCCAGDGGKRR
Trigger: GCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR GCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTaGACGTTGGAAGGAATCAGACCAGGTTCCCAGGCTTCCTATCTT +
Preference number: 1 (lower is better)
Translates to: GPAAASLLGFFLQLK*TLEGIRPGSQASYL
Trigger: AAGATAGGAAGCCTGGGAACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CCA 90 bp GTGAGAACTGAAATGATGGAATCACTCACCTCGCCTCCGCATCTGTaGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGG +
Preference number: 1 (lower is better)
Translates to: VRTEMMESLTSPPHL*AHLTKNPLQVPASR
Trigger: CCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCACAGATGCGGAGGCGAGGTGAGTGATTCCATCATTTCAGTTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR TCA 90 bp GCTGTGGGGTGCATCTCCTGCTTCACCAAAACTGCAGGTGAGAACTaGAATGATGGAATCACTCACCTCGCCTCCGCATCTGTGGGCACA +
Preference number: 1 (lower is better)
Translates to: AVGCISCFTKTAGEN*NDGITHLASASVGT
Trigger: TGTGCCCACAGATGCGGAGGCGAGGTGAGTGATTCCATCATTTCAGTTCTCACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR TCA 90 bp AGAAGCTGGTGGAGAAGCCCTAAGAACGAAGGGACCCCAACGGCCTaGCCTGCTTCAACAGCATCCAGCACAGACACGTATTCTCCCAAA +
Preference number: 1 (lower is better)
Translates to: RSWWRSPKNEGTPTA*PASTASSTDTYSPK
Trigger: TTTGGGAGAATACGTGTCTGTGCTGGATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTCCCTTCGTTCTTAGGGCTTCTCCACCAGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 90 bp GTAAACACCTTGGCAGGAATCCAGAAAACGATCCACGCAGAACATTaGAATGTCACAGAAATGGCCGCCCACTGGCCACGAAGCCCTGGC +
Preference number: 1 (lower is better)
Translates to: VNTLAGIQKTIHAEH*NVTEMAAHWPRSPG
Trigger: GCCAGGGCTTCGTGGCCAGTGGGCGGCCATTTCTGTGACATTGCAATGTTCTGCGTGGATCGTTTTCTGGATTCCTGCCAAGGTGTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 90 bp TGGGTACTATTGTGCTCTCTGCATTGTTCTGCTGAAACTGCAGTCTaGTGCCCCTGTGTGCGTTGCTGCGCTGGTGATGGAGGAAAGAGG +
Preference number: 1 (lower is better)
Translates to: WVLLCSLHCSAETAV*CPCVRCCAGDGGKR
Trigger: CCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CCA 90 bp GGGCTGAGCAATGGAGAGCTGTGGGTAATGGAAAGCTTGGGCTCCTaGGAGTTTCTGTGCGTGCTACGTGTGCATTTTCCCCTTGGAAAC +
Preference number: 1 (lower is better)
Translates to: GLSNGELWVMESLGS*EFLCVLRVHFPLGN
Trigger: GTTTCCAAGGGGAAAATGCACACGTAGCACGCACAGAAACTCCCAGGAGCCCAAGCTTTCCATTACCCACAGCTCTCCATTGCTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR TCA 90 bp CACTGCAAGGCTAAGAGTGCTTTCCATTGTCTGTTCACATCTCTGTaGTCTGTAGCGGTGCTGGCAGCTGGCGGTGGTGGAAATGGCGAA +
Preference number: 1 (lower is better)
Translates to: HCKAKSAFHCLFTSL*SVAVLAAGGGGNGE
Trigger: TTCGCCATTTCCACCACCGCCAGCTGCCAGCACCGCTACAGATCACAGAGATGTGAACAGACAATGGAAAGCACTCTTAGCCTTGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 90 bp GCTTCGGACTGGGTGCCGGGTGTCTCTCTACTAGCAATCAGTATCTaGCCTGAGGACATATTTGAAGTGCTCTGCACCAGAGCCTTCCTA +
Preference number: 1 (lower is better)
Translates to: ASDWVPGVSLLAISI*PEDIFEVLCTRAFL
Trigger: TAGGAAGGCTCTGGTGCAGAGCACTTCAAATATGTCCTCAGGCCAGATACTGATTGCTAGTAGAGAGACACCCGGCACCCAGTCCGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR TCA 90 bp AGACTCCACGAGCCCGTCCAGCTGGAGTGGCATCTCCTCACTTTATaGAAGCCCAAGCCTTCATCCACTACAATTACTTCTCACCACGCA +
Preference number: 1 (lower is better)
Translates to: RLHEPVQLEWHLLTL*KPKPSSTTITSHHA
Trigger: TGCGTGGTGAGAAGTAATTGTAGTGGATGAAGGCTTGGGCTTTCATAAAGTGAGGAGATGCCACTCCAGCTGGACGGGCTCGTGGAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 90 bp ACTGTCTTGGTGGTATCCATTCTCTGGTCTTCTTCCTCTACAGAGTaGGCCCTGGGTCAACGCCTTGTTCATCCACAGTGTCTCAGCAGG +
Preference number: 1 (lower is better)
Translates to: TVLVVSILWSSSSTE*ALGQRLVHPQCLSR
Trigger: CCTGCTGAGACACTGTGGATGAACAAGGCGTTGACCCAGGGCTCACTCTGTAGAGGAAGAAGACCAGAGAATGGATACCACCAAGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 90 bp TGGGTCAACGCCTTGTTCATCCACAGTGTCTCAGCAGGTAGTGTGTaGCTGGCACAAAGTTGGCATTCCCCATTTAGAAGCTGGTGGAGA +
Preference number: 1 (lower is better)
Translates to: WVNALFIHSVSAGSV*LAQSWHSPFRSWWR
Trigger: TCTCCACCAGCTTCTAAATGGGGAATGCCAACTTTGTGCCAGGCACACACTACCTGCTGAGACACTGTGGATGAACAAGGCGTTGACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CCA 90 bp GAAGTGCTCTGCACCAGAGCCTTCCTAAAAAGAAGAGCCGCTGGATaGAAGATAGAGGATGGCCCCTGTCAGAGAAGGGAACTGTTGGTT +
Preference number: 1 (lower is better)
Translates to: EVLCTRAFLKRRAAG*KIEDGPCQRRELLV
Trigger: AACCAACAGTTCCCTTCTCTGACAGGGGCCATCCTCTATCTTCCATCCAGCGGCTCTTCTTTTTAGGAAGGCTCTGGTGCAGAGCACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 90 bp TGGTGGTATCCATTCTCTGGTCTTCTTCCTCTACAGAGTGAGCCCTaGGTCAACGCCTTGTTCATCCACAGTGTCTCAGCAGGTAGTGTG +
Preference number: 1 (lower is better)
Translates to: WWYPFSGLLPLQSEP*VNALFIHSVSAGSV
Trigger: CACACTACCTGCTGAGACACTGTGGATGAACAAGGCGTTGACCCAGGGCTCACTCTGTAGAGGAAGAAGACCAGAGAATGGATACCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 90 bp CAGCTGGCGGTGGTGGAAATGGCGAACGGTAAGCCACGCAGCTGCTaGGAACTAGCATTTAGGATCTGGGCTGGAAGCAACATTTTTAAA +
Preference number: 1 (lower is better)
Translates to: QLAVVEMANGKPRSC*ELAFRIWAGSNIFK
Trigger: TTTAAAAATGTTGCTTCCAGCCCAGATCCTAAATGCTAGTTCTCAGCAGCTGCGTGGCTTACCGTTCGCCATTTCCACCACCGCCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR GCA 90 bp GGGTTCACTACCTTTGGGGACTTCCTGTGCAGCTCTGAACCCTGTTaGAGCACTTATCACTGTCTTGGTGGTATCCATTCTCTGGTCTTC +
Preference number: 1 (lower is better)
Translates to: GFTTFGDFLCSSEPC*STYHCLGGIHSLVF
Trigger: GAAGACCAGAGAATGGATACCACCAAGACAGTGATAAGTGCTGCAACAGGGTTCAGAGCTGCACAGGAAGTCCCCAAAGGTAGTGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 90 bp CCCAGGCTTCCTATCTTTGCCTTTGATGGGTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTGCAGTCTGCTGCCCCTGTGTGCGTT +
Preference number: 1 (lower is better)
Translates to: PRLPIFAFDGYYCAL*IVLLKLQSAAPVCV
Trigger: AACGCACACAGGGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CCA 90 bp AAAGAGATCAAACGGAGATACGCAGAAGTTCAAGAAGTCCTCGCCTaGGTACAAAATTCCTCTGCTGGTGTCAGGAGGCCTCCCCCATTT +
Preference number: 1 (lower is better)
Translates to: KEIKRRYAEVQEVLA*VQNSSAGVRRPPPF
Trigger: AAATGGGGGAGGCCTCCTGACACCAGCAGAGGAATTTTGTACCCAGGCGAGGACTTCTTGAACTTCTGCGTATCTCCGTTTGATCTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 90 bp GGAAATCCCAAGCTGCACAGTGGAGAATTACAGGAACAGAAGAAGTaGTGTGAAGTCTGTCGGTCTCTTCCCTGGTTCAATGAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: GNPKLHSGELQEQKK*CEVCRSLPWFNEEL
Trigger: CAGCTCCTCATTGAACCAGGGAAGAGACCGACAGACTTCACACCACTTCTTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 90 bp AATGCATCCAGTTCGAGAAGCAGCAGCAGCAGCAGCAGCAGCAAATaGCTGTCTGACCCTGGCAGTAACATAAACTTGAACTCTGCAAAG +
Preference number: 1 (lower is better)
Translates to: NASSSRSSSSSSSSK*LSDPGSNINLNSAK
Trigger: CTTTGCAGAGTTCAAGTTTATGTTACTGCCAGGGTCAGACAGTCATTTGCTGCTGCTGCTGCTGCTGCTGCTTCTCGAACTGGATGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR TCA 90 bp TGGCAAAACCGAGTTTGCTTTTTGGGTCCGTATTATGATGGGACATaGATGGGAATGGATGAGAGGTCCTTCACTTGGCTGGCTGACAGC +
Preference number: 1 (lower is better)
Translates to: WQNRVCFLGPYYDGT*MGMDERSFTWLADS
Trigger: GCTGTCAGCCAGCCAAGTGAAGGACCTCTCATCCATTCCCATTCATGTCCCATCATAATACGGACCCAAAAAGCAAACTCGGTTTTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 90 bp CACACACACGCGGATTTGGCTTTAAGGCTGCATAGGTGGGAGTCATaGAATCATCATTCCAGCTCATCTTGTTATGTGAAGAGGCCACAG +
Preference number: 1 (lower is better)
Translates to: HTHADLALRLHRWES*NHHSSSSCYVKRPQ
Trigger: CTGTGGCCTCTTCACATAACAAGATGAGCTGGAATGATGATTCCATGACTCCCACCTATGCAGCCTTAAAGCCAAATCCGCGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 90 bp CAGATAAGCCCTTCTCCACGCGCAGTGTCTGCTAAACGTGTTGGCTaGTGCTCTTATAAAAGCCAGTGCTTACATCTGCAGAAGAAAGTT +
Preference number: 1 (lower is better)
Translates to: QISPSPRAVSAKRVG*CSYKSQCLHLQKKV
Trigger: AACTTTCTTCTGCAGATGTAAGCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACACTGCGCGTGGAGAAGGGCTTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 90 bp CAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCAAGATaGCTTGGGTCTCCTACACCGGGAACAAGGGACAAAAGTCAGCGG +
Preference number: 1 (lower is better)
Translates to: QTYAGRLCSYRWDSR*LGSPTPGTRDKSQR
Trigger: CCGCTGACTTTTGTCCCTTGTTCCCGGTGTAGGAGACCCAAGGCATCTTGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 90 bp TCTGACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTaGACCCTACAGTATACGATGGAAACAACACGTGGGTCTAGACAC +
Preference number: 1 (lower is better)
Translates to: SDNSEPQFLMMNPKG*TLQYTMETTRGSRH
Trigger: GTGTCTAGACCCACGTGTTGTTTCCATCGTATACTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 90 bp GAGTTTGCTTTTTGGGTCCGTATTATGATGGGACATGAATGGGAATaGATGAGAGGTCCTTCACTTGGCTGGCTGACAGCCAAGTCTCTT +
Preference number: 1 (lower is better)
Translates to: EFAFWVRIMMGHEWE*MRGPSLGWLTAKSL
Trigger: AAGAGACTTGGCTGTCAGCCAGCCAAGTGAAGGACCTCTCATCCATTCCCATTCATGTCCCATCATAATACGGACCCAAAAAGCAAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 90 bp AAAACCGAGTTTGCTTTTTGGGTCCGTATTATGATGGGACATGAATaGGAATGGATGAGAGGTCCTTCACTTGGCTGGCTGACAGCCAAG +
Preference number: 1 (lower is better)
Translates to: KTEFAFWVRIMMGHE*EWMRGPSLGWLTAK
Trigger: CTTGGCTGTCAGCCAGCCAAGTGAAGGACCTCTCATCCATTCCCATTCATGTCCCATCATAATACGGACCCAAAAAGCAAACTCGGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 90 bp CTGATAATATGGGTCAGATGGGCAAAATTCCACGAACTGCTCTTATaGACAACACTCGAAAGGATGCCCACACCCAAGATTCAACCGTGG +
Preference number: 1 (lower is better)
Translates to: LIIWVRWAKFHELLL*TTLERMPTPKIQPW
Trigger: CCACGGTTGAATCTTGGGTGTGGGCATCCTTTCGAGTGTTGTCCATAAGAGCAGTTCGTGGAATTTTGCCCATCTGACCCATATTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR GCA 90 bp CTACTAGCAATCAGTATCTGGCCTGAGGACATATTTGAAGTGCTCTaGACCAGAGCCTTCCTAAAAAGAAGAGCCGCTGGATGGAAGATA +
Preference number: 1 (lower is better)
Translates to: LLAISIWPEDIFEVL*TRAFLKRRAAGWKI
Trigger: TATCTTCCATCCAGCGGCTCTTCTTTTTAGGAAGGCTCTGGTGCAGAGCACTTCAAATATGTCCTCAGGCCAGATACTGATTGCTAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR GCA 90 bp GGGCAAAATTCCACGAACTGCTCTTATGGACAACACTCGAAAGGATaGCCACACCCAAGATTCAACCGTGGTTTTAGTGAACATGGTGTT +
Preference number: 1 (lower is better)
Translates to: GQNSTNCSYGQHSKG*PHPRFNRGFSEHGV
Trigger: AACACCATGTTCACTAAAACCACGGTTGAATCTTGGGTGTGGGCATCCTTTCGAGTGTTGTCCATAAGAGCAGTTCGTGGAATTTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR TCA 90 bp GCGACACGGTATGAACAGGTCAGCCACAACCTTCAAAAGAGCTACTaGTCTAAATCACCTTTTCCTTCTGCTGAAGGGAAATTGACCATC +
Preference number: 1 (lower is better)
Translates to: ATRYEQVSHNLQKSY*SKSPFPSAEGKLTI
Trigger: GATGGTCAATTTCCCTTCAGCAGAAGGAAAAGGTGATTTAGATCAGTAGCTCTTTTGAAGGTTGTGGCTGACCTGTTCATACCGTGTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR TCA 90 bp TATGTACAACATTTGCATGACAATAAAATGAGGAAACGGTCCCTATaGTCTGTAGGTGGAGAGATGAACGTGGAGGGCAGGTGTGACCCA +
Preference number: 1 (lower is better)
Translates to: YVQHLHDNKMRKRSL*SVGGEMNVEGRCDP
Trigger: TGGGTCACACCTGCCCTCCACGTTCATCTCTCCACCTACAGATCATAGGGACCGTTTCCTCATTTTATTGTCATGCAAATGTTGTACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 90 bp ATAAGCCCTTCTCCACGCGCAGTGTCTGCTAAACGTGTTGGCTGCTaGTCTTATAAAAGCCAGTGCTTACATCTGCAGAAGAAAGTTATT +
Preference number: 1 (lower is better)
Translates to: ISPSPRAVSAKRVGC*SYKSQCLHLQKKVI
Trigger: AATAACTTTCTTCTGCAGATGTAAGCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACACTGCGCGTGGAGAAGGGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR CCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATaGGATTCAAGATGCCTTGGGTCTCCTACACCGGGAACAAGGGAC +
Preference number: 1 (lower is better)
Translates to: FLKKQTYAGRLCSYR*DSRCLGSPTPGTRD
Trigger: GTCCCTTGTTCCCGGTGTAGGAGACCCAAGGCATCTTGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 90 bp GGCATCTCTCTATTTTTATGGAAACATCTCCAGGAAATCCCAAGCTaGACAGTGGAGAATTACAGGAACAGAAGAAGTGGTGTGAAGTCT +
Preference number: 1 (lower is better)
Translates to: GISLFLWKHLQEIPS*TVENYRNRRSGVKS
Trigger: AGACTTCACACCACTTCTTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGTTTCCATAAAAATAGAGAGATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 90 bp AATGGAAATGCAGTCCTCACGATAAATCTTTTAAAAATTCGCTTCTaGTCTCTTGGGATTTCTTGTGGCTTGGGTGTGTGTCCATGTGTT +
Preference number: 1 (lower is better)
Translates to: NGNAVLTINLLKIRF*SLGISCGLGVCPCV
Trigger: AACACATGGACACACACCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAAAAGATTTATCGTGAGGACTGCATTTCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CAA 90 bp GTGACCCAGGCGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCTaGGACGGCACGGGCAGGCGGGCAGCAGCCCGTGATGACTGGACG +
Preference number: 2 (lower is better)
Translates to: VTQARLPDTGPRPGA*DGTGRRAAARDDWT
Trigger: CGTCCAGTCATCACGGGCTGCTGCCCGCCTGCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTGGGTCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR TCA 90 bp GCCCTCAAAGACCCTATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTCCAGGCGCGGCTACCTaGTACCGGCCCAAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: ALKDPIMGQGARSGPLMRPGAAT*YRPKAR
Trigger: CCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTGG...ACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATAGGGTCTTTGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR GCA 90 bp TATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTTCCTCTCTTTCCCCCGGCCCAAGGCCAGGTaGCTTGGACGGCACGGGCAG +
Preference number: 2 (lower is better)
Translates to: YHGSGGKVWAPHAFLSFPRPKAR*LGRHGQ
Trigger: CTGCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCG...GGGGAAAGAGAGGAACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp TATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTTCCTCTCTTTCCCCCTGGCCACGAAGCCCTaGCCCCACCCTGCGAGGTCA +
Preference number: 2 (lower is better)
Translates to: YHGSGGKVWAPHAFLSFPLATKP*PHPARS
Trigger: TGACCTCGCAGGGTGGGGCCAGGGCTTCGTGGCCAG...GGGGAAAGAGAGGAACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGTGGGGAGGGTCCTTCTaGCCCCAAGCCAATCTCTGC +
Preference number: 2 (lower is better)
Translates to: VGTPDQESTASPCQQGPMWGGSF*PQANLC
Trigger: GCAGAGATTGGCTTGGGGCCAGAAGGACCCTCCCCA...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR CAA 90 bp CTGTCAAATATGGTTCGGTTGGGTGGGGCCCTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCAGGGTCCCGGAGCTGCAGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: LSNMVRLGGALTDSR*SSICCSGSRSCRVQ
Trigger: CTGCACCCTGCAGCTCCGGGACCCTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATATTTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CCA 90 bp TGCCCCTGTGTGCGTTGCTGCGCTGGTGATGGAGGAAAGAGGCGCCTGGGTGGTAGGAGGGCTGAGCAATaGAGAGCTGTGGGTAATGGA +
Preference number: 2 (lower is better)
Translates to: CPCVRCCAGDGGKRRLGGRRAEQ*RAVGNG
Trigger: TCCATTACCCACAGCTCTCCATTGCTCAGCCCTCCT...ACCACCCAGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR-3UTR CCA 90 bp ACCAACGCCATGAGCCGGTCCTTTGAGGGAGGGCTTCGGACTGGGTGCCGGGTGTCTTGGGATTTCTTGTaGCTTGGGTGTGTGTCCATG +
Preference number: 2 (lower is better)
Translates to: TNAMSRSFEGGLRTGCRVSWDFL*LGCVSM
Trigger: CATGGACACACACCCAAGCCACAAGAAATCCCAAGA...CACCCGGCACCCAGTCCGAAGCCCTCCCTCAAAGGACCGGCTCATGGCGTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR GCA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGCTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: VGTPDQESTASPCQQGPMLKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp GAATTACAGGAACAGAAGAAGTGGTGTGAAGTCTGTCGGTCTCTTCCCTGGTTCCCCCTGCACGCCTCCTaGCCCACCGCTGGGACAGAC +
Preference number: 2 (lower is better)
Translates to: ELQEQKKWCEVCRSLPWFPLHAS*PTAGTD
Trigger: GTCTGTCCCAGCGGTGGGGCAGGAGGCGTGCAGGGG...GAACCAGGGAAGAGACCGACAGACTTCACACCACTTCTTCTGTTCCTGTAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR GCA 90 bp GACCAGGTTCCCAGGCTTCCTATCTTTGCCTTTGATGGGTACTATTGTGCTCTCCCCGGAGCTGCAGGGTaGAGGGCCCCTGGTAAGGAG +
Preference number: 2 (lower is better)
Translates to: DQVPRLPIFAFDGYYCALPGAAG*RAPGKE
Trigger: CTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGG...GAGAGCACAATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGGGAACCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CCA 90 bp GGCAGGAATCCAGAAAACGATCCACGCAGAACATTGCAATGTCACAGAAATGGCCAAGGCCAGGTGCCTTaGACGGCACGGGCAGGCGGG +
Preference number: 2 (lower is better)
Translates to: GRNPENDPRRTLQCHRNGQGQVP*TARAGG
Trigger: CCCGCCTGCCCGTGCCGTCCAAGGCACCTGGCCTTG...GCCATTTCTGTGACATTGCAATGTTCTGCGTGGATCGTTTTCTGGATTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp TGCTGCCCCTGTGTGCGTTGCTGCGCTGGTGATGGAGGAAAGAGGCGCCTGGGTACTCCAGCTCCGCACTaGTTGAGTTTCCTTGTTCAA +
Preference number: 2 (lower is better)
Translates to: CCPCVRCCAGDGGKRRLGTPAPH*LSFLVQ
Trigger: TTGAACAAGGAAACTCAACCAGTGCGGAGCTGGAGT...ACCCAGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678556.1
3UTR-3UTR TCA 90 bp ACAGACACGTATTCTCCCAAACACTTCCTGATGACTTCAGTGGTGCTGGAGTTTCGTGGAGGGCAGGTGTaGCCCAGGCGCGGCTACCTG +
Preference number: 2 (lower is better)
Translates to: TDTYSPKHFLMTSVVLEFRGGQV*PRRGYL
Trigger: CAGGTAGCCGCGCCTGGGTCACACCTGCCCTCCACG...AAACTCCAGCACCACTGAAGTCATCAGGAAGTGTTTGGGAGAATACGTGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGAATCCTGCGGGAATTTaGGTAGGTTTTGAGCACTGC +
Preference number: 2 (lower is better)
Translates to: VGTPDQESTASPCQQGPMNPAGI*VGFEHC
Trigger: GCAGTGCTCAAAACCTACCCAAATTCCCGCAGGATT...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp AGAGCTAGAGCTGTGGGGTGCATCTCCTGCTTCACCAAAACTGCAGGTGAGAACTGGGGAGGGTCCTTCTaGCCCCAAGCCAATCTCTGC +
Preference number: 2 (lower is better)
Translates to: RARAVGCISCFTKTAGENWGGSF*PQANLC
Trigger: GCAGAGATTGGCTTGGGGCCAGAAGGACCCTCCCCA...GTTCTCACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTGAAGAGAGGCTAATCTaGAGAGCCAGTGAACCTTCA +
Preference number: 2 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPEERLI*RASEPS
Trigger: TGAAGGTTCACTGGCTCTCCAGATTAGCCTCTCTTC...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCGAAGAGAGGCTAATCTaGAGAGCCAGTGAACCTTCA +
Preference number: 2 (lower is better)
Translates to: NPLQVPASRARWEHGLLIEERLI*RASEPS
Trigger: TGAAGGTTCACTGGCTCTCCAGATTAGCCTCTCTTC...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp ACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGAACAGAAGAAGGAGACCGGGCGGCGGTaGTGGCAGGAAGACGGGTGG +
Preference number: 2 (lower is better)
Translates to: TSPGNPKLHSGELQEQKKETGRR*WQEDGW
Trigger: CCACCCGTCTTCCTGCCACCACCGCCGCCCGGTCTC...CTTCTTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CAA 90 bp CATCCAGGAGGGCTGAGCAATGGAGAGCTGTGGGTAATGGAAAGCTaGGGCTCCTGGGAGTTTCTGTGCGTGCTACGTGTGCATTTTCCC +
Preference number: 2 (lower is better)
Translates to: HPGGLSNGELWVMES*GSWEFLCVLRVHFP
Trigger: GGGAAAATGCACACGTAGCACGCACAGAAACTCCCAGGAGCCCAAGCTTTCCATTACCCACAGCTCTCCATTGCTCAGCCCTCCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR-3UTR TCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 2 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGAGCTCATCTTGTTATGTaGAGAGGCCACAGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGAHLVM*RGHRGP
Trigger: TGGGCCTCTGTGGCCTCTTCACATAACAAGATGAGC...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 2 (lower is better)
Translates to: NPLQVPASRARWEHGLLIASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGCTAAACGTGTTGGCTaGTGCTCTTATAAAAGCCAG +
Preference number: 2 (lower is better)
Translates to: VGTPDQESTASPCQQGPMAKRVG*CSYKSQ
Trigger: CTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGC...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 2 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 2 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp GGAGAAGCCCTAAGAACGAAGGGACCCCAACGGCCTGACCTGCTTCAACAGCATAGGAAACGGTCCCTATaGTCTGTAGGTGGAGAGATG +
Preference number: 2 (lower is better)
Translates to: GEALRTKGPQRPDLLQQHRKRSL*SVGGEM
Trigger: CATCTCTCCACCTACAGATCATAGGGACCGTTTCCT...ATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTCCCTTCGTTCTTAGGGCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR TCA 90 bp GCCACGAAGCCCTGGCCCCACCCTGCGAGGTCACTTCCTACCCTACCAACAGCATGCATGACAATAAAATaGGGAAACGGTCCCTATGAT +
Preference number: 2 (lower is better)
Translates to: ATKPWPHPARSLPTLPTACMTIK*GNGPYD
Trigger: ATCATAGGGACCGTTTCCTCATTTTATTGTCATGCA...TGCTGTTGGTAGGGTAGGAAGTGACCTCGCAGGGTGGGGCCAGGGCTTCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR TCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAACCGCGGGGCATGCATaGTCTCCGAGGCGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: FHTLGEKANWLVLPHNNITAGHA*SPRRPA
Trigger: GGCTGGGCGCCTCGGAGATCATGCATGCCCCGCGGT...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678556.1
3UTR-3UTR GCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 2 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp ACCAACGCCATGAGCCGGTCCTTTGAGGGAGGGCTTCGGACTGGGTGCCGGGTGTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 2 (lower is better)
Translates to: TNAMSRSFEGGLRTGCRVFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...CACCCGGCACCCAGTCCGAAGCCCTCCCTCAAAGGACCGGCTCATGGCGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR GCA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGACTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGLKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCCTGGACCGCGGGGCATaGATGATCTCCGAGGCGCCC +
Preference number: 2 (lower is better)
Translates to: HPKVSKSFSDALLFDANSLDRGA*MISEAP
Trigger: GGGCGCCTCGGAGATCATGCATGCCCCGCGGTCCAG...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000678556.1
3UTR-3UTR CCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACGGACAGGGAGATGGTaGGAGGAAGATCAATCTCGT +
Preference number: 2 (lower is better)
Translates to: PAAASLLGFFLQLKCTLERTGRW*EEDQSR
Trigger: ACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCG...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CAA 90 bp CGCACCAAGAAGGGGAAGTTCTCCCTTTGCCCACCTGTCATTCAATaGTCCTTTCACCTCAGTAGGCCAAGCACGCGGCATTCTTGGTCA +
Preference number: 2 (lower is better)
Translates to: RTKKGKFSLCPPVIQ*SFHLSRPSTRHSWS
Trigger: TGACCAAGAATGCCGCGTGCTTGGCCTACTGAGGTGAAAGGACAATTGAATGACAGGTGGGCAAAGGGAGAACTTCCCCTTCTTGGTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CAA 90 bp TTCTCTGGTCTTCTTCCTCTACAGAGTGAGCCCTGGGTCAACGCCTaGTTCATCCACAGTGTCTCAGCAGGTAGTGTGTGCCTGGCACAA +
Preference number: 2 (lower is better)
Translates to: FSGLLPLQSEPWVNA*FIHSVSAGSVCLAQ
Trigger: TTGTGCCAGGCACACACTACCTGCTGAGACACTGTGGATGAACAAGGCGTTGACCCAGGGCTCACTCTGTAGAGGAAGAAGACCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CAA 90 bp AGTAAACACCTTGGCAGGAATCCAGAAAACGATCCACGCAGAACATaGCAATGTCACAGAAATGGCCGCCCACTGGCCACGAAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SKHLGRNPENDPRRT*QCHRNGRPLATKPW
Trigger: CCAGGGCTTCGTGGCCAGTGGGCGGCCATTTCTGTGACATTGCAATGTTCTGCGTGGATCGTTTTCTGGATTCCTGCCAAGGTGTTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CAA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGTTCCCAGGCTTCCTATCTTTGCCTT +
Preference number: 2 (lower is better)
Translates to: AAASLLGFFLQLKCT*EGIRPGSQASYLCL
Trigger: AAGGCAAAGATAGGAAGCCTGGGAACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR TCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCTGCACTGCTGGAGGATaGGGGCAGCACTGCATGATA +
Preference number: 2 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSCTAGG*GQHCMI
Trigger: TATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCA...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCGCAATGGGAATATACTaGGGAGTCACATATTTCAAC +
Preference number: 2 (lower is better)
Translates to: NPLQVPASRARWEHGLLIAMGIY*GVTYFN
Trigger: GTTGAAATATGTGACTCCTCAGTATATTCCCATTGC...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGCTGGGAGCCTCCTGTaGACTGAGCAGCCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGAGSLL*TEQPCR
Trigger: TCTGCAGGGCTGCTCAGTTCACAGGAGGCTCCCAGC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGACAAACAAAAACCAGTaGCCTATCTACAGAGGTAAG +
Preference number: 2 (lower is better)
Translates to: VGTPDQESTASPCQQGPMTNKNQ*PIYRGK
Trigger: CTTACCTCTGTAGATAGGTCACTGGTTTTTGTTTGT...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp GCCACGAAGCCCTGGCCCCACCCTGCGAGGTCACTTCCTACCCTACCAACAGCATACCTAAATATGTTCTaGTCAAAGATGACTGACAGG +
Preference number: 2 (lower is better)
Translates to: ATKPWPHPARSLPTLPTAYLNMF*SKMTDR
Trigger: CCTGTCAGTCATCTTTGATCAGAACATATTTAGGTA...TGCTGTTGGTAGGGTAGGAAGTGACCTCGCAGGGTGGGGCCAGGGCTTCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR TCA 90 bp ACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGAACAGAAGAAGAAACCCAGGGCTGGCTaGCCGCAGAGCCTTACCTCC +
Preference number: 2 (lower is better)
Translates to: TSPGNPKLHSGELQEQKKKPRAG*PQSLTS
Trigger: GGAGGTAAGGCTCTGCGGTCAGCCAGCCCTGGGTTT...CTTCTTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR GCA 90 bp GACCAGGTTCCCAGGCTTCCTATCTTTGCCTTTGATGGGTACTATTGTGCTCTCCGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 2 (lower is better)
Translates to: DQVPRLPIFAFDGYYCALRLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...GAGAGCACAATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGGGAACCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CCA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 2 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 2 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp TATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTTCCTCTCTTTCCCCACACTTTTAAAGTGCTaGATGTTCCTAAAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: YHGSGGKVWAPHAFLSFPTLLKC*MFLKAG
Trigger: ACCAGCCTTTAGGAACATTCAGCACTTTAAAAGTGT...GGGGAAAGAGAGGAACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 2 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGATTTCTTGGATGCTTCTaGGGACCACTCCAGGATATT +
Preference number: 2 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGFLGCF*GPLQDI
Trigger: AATATCCTGGAGTGGTCCCCAGAAGCATCCAAGAAA...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp GGCAGGAATCCAGAAAACGATCCACGCAGAACATTGCAATGTCACAGAAATGGCACGAGCCCGTCCAGCTaGAGTGGCATCTCCTCACTT +
Preference number: 2 (lower is better)
Translates to: GRNPENDPRRTLQCHRNGTSPSS*SGISSL
Trigger: AAGTGAGGAGATGCCACTCCAGCTGGACGGGCTCGT...GCCATTTCTGTGACATTGCAATGTTCTGCGTGGATCGTTTTCTGGATTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp TCCACGCAGAACATTGCAATGTCACAGAAATGGCCGCCCACTGGCCACGAAGCCTCCTTGGAGGTGGGTTaGCTACTCTACTGTATAGTA +
Preference number: 2 (lower is better)
Translates to: STQNIAMSQKWPPTGHEASLEVG*LLYCIV
Trigger: TACTATACAGTAGAGTAGCCAACCCACCTCCAAGGA...GGCTTCGTGGCCAGTGGGCGGCCATTTCTGTGACATTGCAATGTTCTGCGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CAA 90 bp GGAGAGCAAAGGGCAGGCTGTGGAGCATGTTCGTGGCATGAAGGCTaGGCTCCAAGCACTGGCTTTAATCACTTAAGCAAGCAACACAAA +
Preference number: 2 (lower is better)
Translates to: GEQRAGCGACSWHEG*APSTGFNHLSKQHK
Trigger: TTTGTGTTGCTTGCTTAAGTGATTAAAGCCAGTGCTTGGAGCCAAGCCTTCATGCCACGAACATGCTCCACAGCCTGCCCTTTGCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR TCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 2 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGGCTCATCTTGTTATGTaGAGAGGCCACAGAGGCCCA +
Preference number: 2 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQAHLVM*RGHRGP
Trigger: TGGGCCTCTGTGGCCTCTTCACATAACAAGATGAGC...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR TCA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATGTTGTAAGCATGAGCTaGCAACTGGTGCCTGTGTTT +
Preference number: 2 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYVVSMS*QLVPVF
Trigger: AAACACAGGCACCAGTTGTCAGCTCATGCTTACAAC...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp TTCCTTGGAGGTGGGTTGGCTACTCTACTGTATAGTACAACAAGTAGAACGAAAGGGACCCCAACGGCCTaGCCTGCTTCAACAGCATCC +
Preference number: 2 (lower is better)
Translates to: FLGGGLATLLYSTTSRTKGTPTA*PASTAS
Trigger: GGATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTCCC...TTTCGTTCTACTTGTTGTACTATACAGTAGAGTAGCCAACCCACCTCCAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR TCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCACGCATCCAGGAGGGCTaGGCAATGGAGAGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: IFHPKVSKSFSDALLFDARIQEG*AMESCG
Trigger: CCCACAGCTCTCCATTGCTCAGCCCTCCTGGATGCG...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR-3UTR GCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 2 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp GGTGAAAGAGATCAAACGGAGATACGCAGAAGTTCAAGAAGTCCTCGCCTGGGTGCTAGAGCTGTGGGGTaGATCTCCTGCTTCACCAAA +
Preference number: 2 (lower is better)
Translates to: GERDQTEIRRSSRSPRLGARAVG*ISCFTK
Trigger: TTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGC...ACCCAGGCGAGGACTTCTTGAACTTCTGCGTATCTCCGTTTGATCTCTTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR GCA 90 bp GACCCCAACGGCCTGACCTGCTTCAACAGCATCCAGCACAGACACGTATTCTCCCAAACTGTGTACTCATaGATAACACCTCCAACAGGA +
Preference number: 2 (lower is better)
Translates to: DPNGLTCFNSIQHRHVFSQTVYS*ITPPTG
Trigger: TCCTGTTGGAGGTGTTATGCATGAGTACACAGTTTG...GGAGAATACGTGTCTGTGCTGGATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR GCA 90 bp GCCCTCAAAGACCCTATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTAAAAGTCTATCCCTCTaGCATGCTATAAATGGAAAA +
Preference number: 2 (lower is better)
Translates to: ALKDPIMGQGARSGPLMRKSLSL*HAINGK
Trigger: TTTTCCATTTATAGCATGGCAGAGGGATAGACTTTT...ACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATAGGGTCTTTGAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR GCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGC +
Preference number: 2 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGETAVC*PCVRCC
Trigger: GCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CCA 90 bp CCTGAGAGCTGGTGTCTCTCCAGCAGAGGCCTTCCAACTGTCACTGGAACAAGAACAACTCTTGGGGTTTaGAACAGTCTCTCCAGTTAC +
Preference number: 2 (lower is better)
Translates to: PESWCLSSRGLPTVTGTRTTLGV*NSLSSY
Trigger: GTAACTGGAGAGACTGTTCCAAACCCCAAGAGTTGT...TCTTGTTCCAGTGACAGTTGGAAGGCCTCTGCTGGAGAGACACCAGCTCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp GTGAGCCCTGGGTCAACGCCTTGTTCATCCACAGTGTCTCAGCAGGTAGTGTGTCCATTTAGAAGCTGGTaGAGAAGCCCTAAGAACGAA +
Preference number: 2 (lower is better)
Translates to: VSPGSTPCSSTVSQQVVCPFRSW*RSPKNE
Trigger: TTCGTTCTTAGGGCTTCTCCACCAGCTTCTAAATGG...ACACACTACCTGCTGAGACACTGTGGATGAACAAGGCGTTGACCCAGGGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 2 (lower is better)
Translates to: IFPILSSIQKSPKASAMHSRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678556.1
3UTR-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTCAAATATGGTTCGGTTaGGTGGGGCCCTCACGGACT +
Preference number: 2 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCQIWFG*VGPSRT
Trigger: AGTCCGTGAGGGCCCCACCCAACCGAACCATATTTG...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CAA 90 bp TCACCTTCGAGACCCACAGACAGACACAAACACACACACGCGGATTaGGCTTTAAGGCTGCATAGGTGGGAGTCATGGAATCATCATTCC +
Preference number: 2 (lower is better)
Translates to: SPSRPTDRHKHTHAD*ALRLHRWESWNHHS
Trigger: GGAATGATGATTCCATGACTCCCACCTATGCAGCCTTAAAGCCAAATCCGCGTGTGTGTGTTTGTGTCTGTCTGTGGGTCTCGAAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGATGCACTGCTGGAGGATaGGGGCAGCACTGCATGATA +
Preference number: 2 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGCTAGG*GQHCMI
Trigger: TATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCA...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTGTAGGTTTTGAGCACTaGATTCCTTTAAGAATGCTA +
Preference number: 2 (lower is better)
Translates to: PTLHMAECTADKPFSTRSVGFEH*IPLRML
Trigger: TAGCATTCTTAAAGGAATGCAGTGCTCAAAACCTAC...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp TTGCTGCTGGGTGGGCATGGACCCCCGCTATACATAGCAATGTCTATTAAATCAGGGAGTTTCTGTGCGTaGTACGTGTGCATTTTCCCC +
Preference number: 2 (lower is better)
Translates to: LLLGGHGPPLYIAMSIKSGSFCA*YVCIFP
Trigger: GGGGAAAATGCACACGTAGCACGCACAGAAACTCCC...TGATTTAATAGACATTGCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR-3UTR GCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCCTGGACCGCGGGGCATaGATGATCTTGCCAAATCCC +
Preference number: 2 (lower is better)
Translates to: HPKVSKSFSDALLFDANSLDRGA*MILPNP
Trigger: GGGATTTGGCAAGATCATGCATGCCCCGCGGTCCAG...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR-3UTR CCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 2 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TCCACGCAGAACATTGCAATGTCACAGAAATGGCCGCCCACTGGCCACGAAGCCTTTGGCGTCACCTGCTaGCTTTATCTTCCTTTAAAA +
Preference number: 2 (lower is better)
Translates to: STQNIAMSQKWPPTGHEAFGVTC*LYLPLK
Trigger: TTTTAAAGGAAGATAAAGCCAGCAGGTGACGCCAAA...GGCTTCGTGGCCAGTGGGCGGCCATTTCTGTGACATTGCAATGTTCTGCGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTCGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 2 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCRRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR TCA 90 bp GCGCAGTGTCTGCTAAACGTGTTGGCTGCTGCTCTTATAAAAGCCAGTGCTTACGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 2 (lower is better)
Translates to: AQCLLNVLAAALIKASAYVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...GTAAGCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACACTGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCCGATGCACTGCTATTTaGTGCAAACTCCTGCAACAA +
Preference number: 2 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSRCTAI*CKLLQQ
Trigger: TTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCG...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCGCTGGGAGCCTCCTGTaGACTGAGCAGCCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFAGSLL*TEQPCR
Trigger: TCTGCAGGGCTGCTCAGTTCACAGGAGGCTCCCAGC...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp GAATTACAGGAACAGAAGAAGTGGTGTGAAGTCTGTCGGTCTCTTCCCTGGTTCTTTCCTAAGCCCCGATaGTGGGTTCACTACCTTTGG +
Preference number: 2 (lower is better)
Translates to: ELQEQKKWCEVCRSLPWFFPKPR*WVHYLW
Trigger: CCAAAGGTAGTGAACCCATCATCGGGGCTTAGGAAA...GAACCAGGGAAGAGACCGACAGACTTCACACCACTTCTTCTGTTCCTGTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR GCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 2 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp CCTGAGAGCTGGTGTCTCTCCAGCAGAGGCCTTCCAACTGTCACTGGAACAAGATTTAACTGCATGTTGTaGTTTTTACCCGGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: PESWCLSSRGLPTVTGTRFNCML*FLPGAL
Trigger: AAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAA...TCTTGTTCCAGTGACAGTTGGAAGGCCTCTGCTGGAGAGACACCAGCTCTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTTCTTATAAAAGCCAGTaGTTACATCTGCAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: PTLHMAECTADKPFSTRSSYKSQ*LHLQKK
Trigger: TTTCTTCTGCAGATGTAAGCACTGGCTTTTATAAGA...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCTGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGA +
Preference number: 2 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFCPCVR*CAGDGG
Trigger: TCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CCA 90 bp TTGCTGCTGGGTGGGCATGGACCCCCGCTATACATAGCAATGTCTATTAAATCAGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: LLLGGHGPPLYIAMSIKSGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...TGATTTAATAGACATTGCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACTCCACTTTATACCTTaGCACACAACACAGGAATTT +
Preference number: 2 (lower is better)
Translates to: PAAASLLGFFLQLKCTLELHFIP*HTTQEF
Trigger: AAATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAG...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp AGAGCTAGAGCTGTGGGGTGCATCTCCTGCTTCACCAAAACTGCAGGTGAGAACGTTGGACTAGTTCTGTaGATGTTACTGTGTGCAAAG +
Preference number: 2 (lower is better)
Translates to: RARAVGCISCFTKTAGENVGLVL*MLLCAK
Trigger: CTTTGCACACAGTAACATCCACAGAACTAGTCCAAC...GTTCTCACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTATGGTTCGGTTGGGTaGGGCCCTCACGGACTCTCG +
Preference number: 2 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCYGSVG*GPHGLS
Trigger: CGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATA...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCCGAGTTGCTGCTGGGTaGGCATGGACCCCCGCTATA +
Preference number: 2 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCRVAAG*AWTPAI
Trigger: TATAGCGGGGGTCCATGCCCACCCAGCAGCAACTCG...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGGCCTGCACTTGGATCTaGTCACCAGTGACATCGTCC +
Preference number: 2 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGACTWI*SPVTSS
Trigger: GGACGATGTCACTGGTGACCAGATCCAAGTGCAGGC...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR-3UTR TCA 90 bp TTGCTGCTGGGTGGGCATGGACCCCCGCTATACATAGCAATGTCTATTAAATCAGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 2 (lower is better)
Translates to: LLLGGHGPPLYIAMSIKSVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...TGATTTAATAGACATTGCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR TCA 90 bp GCGCAGTGTCTGCTAAACGTGTTGGCTGCTGCTCTTATAAAAGCCAGTGCTTACGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 2 (lower is better)
Translates to: AQCLLNVLAAALIKASAYDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...GTAAGCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACACTGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCACTGCTGGAGGATaGGGGCAGCACTGCATGATA +
Preference number: 2 (lower is better)
Translates to: IFPILSSIQKSPKASAMHCTAGG*GQHCMI
Trigger: TATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCA...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCATGCACTGCTGGAGGATaGGGGCAGCACTGCATGATA +
Preference number: 2 (lower is better)
Translates to: IFHPKVSKSFSDALLFDACTAGG*GQHCMI
Trigger: TATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCA...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp GAATTACAGGAACAGAAGAAGTGGTGTGAAGTCTGTCGGTCTCTTCCCTGGTTCCATCTCCTCACTTTATaGAAGCCCAAGCCTTCATCC +
Preference number: 2 (lower is better)
Translates to: ELQEQKKWCEVCRSLPWFHLLTL*KPKPSS
Trigger: GGATGAAGGCTTGGGCTTTCATAAAGTGAGGAGATG...GAACCAGGGAAGAGACCGACAGACTTCACACCACTTCTTCTGTTCCTGTAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR GCA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGCACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 2 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR GCA 90 bp GAACAAGGGACAAAAGTCAGCGGTATGCCCAGGAGTGTTCATTCCCACCAAATGAAACGTGTTGGCTGCTaGTCTTATAAAAGCCAGTGC +
Preference number: 2 (lower is better)
Translates to: EQGTKVSGMPRSVHSHQMKRVGC*SYKSQC
Trigger: GCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTT...CATTTGGTGGGAATGAACACTCCTGGGCATACCGCTGACTTTTGTCCCTTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp CGGATACTTTTTAATACATCTAGTCTAAAACTTACAGGAAGGCATCCTAGCACCCCTCACTCCCCTACGTaGTGGCCTTTCCTGGAGCAC +
Preference number: 2 (lower is better)
Translates to: RILFNTSSLKLTGRHPSTPHSPT*WPFLEH
Trigger: GTGCTCCAGGAAAGGCCAGCACGTAGGGGAGTGAGG...GGTGCTAGGATGCCTTCCTGTAAGTTTTAGACTAGATGTATTAAAAAGTATCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGACCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 2 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAAAGAAATTGCACTGCTaGAGGATGAGGGCAGCACTG +
Preference number: 2 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGKKLHC*RMRAAL
Trigger: CAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTT...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TTTCCTTCTGCTGAAGGGAAATTGACCATCAATTCATGTTATGACCTTGGCTTTTGGGGAGGGTCCTTCTaGCCCCAAGCCAATCTCTGC +
Preference number: 2 (lower is better)
Translates to: FPSAEGKLTINSCYDLGFWGGSF*PQANLC
Trigger: GCAGAGATTGGCTTGGGGCCAGAAGGACCCTCCCCA...AAAGCCAAGGTCATAACATGAATTGATGGTCAATTTCCCTTCAGCAGAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR CAA 90 bp CTATACATAGCAATGTCTATTAAATCACTGTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGACTCTCGGTTGAGTTCCATCTGCTGT +
Preference number: 2 (lower is better)
Translates to: LYIAMSIKSLSNMVR*GGALTDSRLSSICC
Trigger: ACAGCAGATGGAACTCAACCGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATATTTGACAGTGATTTAATAGACATTGCTATGTATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR TCA 90 bp TCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAATCAGACCAGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 2 (lower is better)
Translates to: SLLGFFLQLKCTLEGIRPDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...TGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR TCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 2 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACCCCTCCACTGTTCTCTaGCTGTCCAGTTCTTGCCTT +
Preference number: 2 (lower is better)
Translates to: IFPILSSIQKSPKASAMHPSTVL*LSSSCL
Trigger: AAGGCAAGAACTGGACAGTCAGAGAACAGTGGAGGG...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp AAAAGCTACCCTACAGAAATACCCAGTTTTTGGCGTCACCTGCTGGCTTTATCTCACCCGGAAATGTTCTaGGTTGACAGACCCCTCTTA +
Preference number: 2 (lower is better)
Translates to: KSYPTEIPSFWRHLLALSHPEMF*VDRPLL
Trigger: TAAGAGGGGTCTGTCAACTCAGAACATTTCCGGGTG...AGATAAAGCCAGCAGGTGACGCCAAAAACTGGGTATTTCTGTAGGGTAGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR GCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 2 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp AAAAGCTACCCTACAGAAATACCCAGTTTTTGGCGTCACCTGCTGGCTTTATCTTCAGCAGGTAGTGTGTaGCTGGCACAAAGTTGGCAT +
Preference number: 2 (lower is better)
Translates to: KSYPTEIPSFWRHLLALSSAGSV*LAQSWH
Trigger: ATGCCAACTTTGTGCCAGGCACACACTACCTGCTGA...AGATAAAGCCAGCAGGTGACGCCAAAAACTGGGTATTTCTGTAGGGTAGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR GCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGC +
Preference number: 2 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFETAVC*PCVRCC
Trigger: GCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTC...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: HPKVSKSFSDALLFDANSGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGATCTCGCCAATACTGTaGACATGTGCAACACATTCA +
Preference number: 2 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQISPIL*TCATHS
Trigger: TGAATGTGTTGCACATGTCCACAGTATTGGCGAGAT...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CCA 90 bp AGTATCTGGCCTGAGGACATATTTGAAGTGCTCTGCACCAGAGCCTTCCTAAAATCTTGGGATTTCTTGTaGCTTGGGTGTGTGTCCATG +
Preference number: 2 (lower is better)
Translates to: SIWPEDIFEVLCTRAFLKSWDFL*LGCVSM
Trigger: CATGGACACACACCCAAGCCACAAGAAATCCCAAGA...TTTTAGGAAGGCTCTGGTGCAGAGCACTTCAAATATGTCCTCAGGCCAGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CCA 90 bp ACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGAACAGAAGAAGCAGCTGCACATGGAATaGAACCTTCATTTCCACAGG +
Preference number: 2 (lower is better)
Translates to: TSPGNPKLHSGELQEQKKQLHME*NLHFHR
Trigger: CCTGTGGAAATGAAGGTTCCATTCCATGTGCAGCTG...CTTCTTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp TTCCTTGGAGGTGGGTTGGCTACTCTACTGTATAGTACAACAAGTAGAACGAAACAGGTAGTGTGTGCCTaGCACAAAGTTGGCATTCCC +
Preference number: 2 (lower is better)
Translates to: FLGGGLATLLYSTTSRTKQVVCA*HKVGIP
Trigger: GGGAATGCCAACTTTGTGCCAGGCACACACTACCTG...TTTCGTTCTACTTGTTGTACTATACAGTAGAGTAGCCAACCCACCTCCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp GAATTACAGGAACAGAAGAAGTGGTGTGAAGTCTGTCGGTCTCTTCCCTGGTTCGAAATACCCAGTTTTTaGCGTCACCTGCTGGCTTTA +
Preference number: 2 (lower is better)
Translates to: ELQEQKKWCEVCRSLPWFEIPSF*RHLLAL
Trigger: TAAAGCCAGCAGGTGACGCCAAAAACTGGGTATTTC...GAACCAGGGAAGAGACCGACAGACTTCACACCACTTCTTCTGTTCCTGTAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR TCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 2 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 2 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 2 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 2 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 2 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 2 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp TTTAAAAATTCGCTTCTGCTCTCTTGGGATTTCTTGTGGCTTGGGTGTGTGTCCGGGAGGGTGAGGACATaGTTGTCAAGCTTCTGTATT +
Preference number: 2 (lower is better)
Translates to: FKNSLLLSWDFLWLGCVSGRVRT*LSSFCI
Trigger: AATACAGAAGCTTGACAAGCATGTCCTCACCCTCCC...GGACACACACCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp CTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAATCAGACCAGGTTCCGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 2 (lower is better)
Translates to: LGFFLQLKCTLEGIRPGSVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...GGAACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCACCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 2 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp GAACAAGGGACAAAAGTCAGCGGTATGCCCAGGAGTGTTCATTCCCACCAAATGTACAATAACCCACAATaGCTTATTACCACGATCAGC +
Preference number: 2 (lower is better)
Translates to: EQGTKVSGMPRSVHSHQMYNNPQ*LITTIS
Trigger: GCTGATCGTGGTAATAAGCCATTGTGGGTTATTGTA...CATTTGGTGGGAATGAACACTCCTGGGCATACCGCTGACTTTTGTCCCTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACAATCACTGTCAAATATaGTTCGGTTGGGTGGGGCCC +
Preference number: 2 (lower is better)
Translates to: IFPILSSIQKSPKASAMHNHCQI*FGWVGP
Trigger: GGGCCCCACCCAACCGAACCATATTTGACAGTGATT...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR TCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCAGCAATGGGAATATACTaGGGAGTCACATATTTCAAC +
Preference number: 2 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPAMGIY*GVTYFN
Trigger: GTTGAAATATGTGACTCCTCAGTATATTCCCATTGC...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGTCACTGGAACAAGACTaGATCCAGTCTCAGAACCTC +
Preference number: 2 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRSLEQD*IQSQNL
Trigger: GAGGTTCTGAGACTGGATTCAGTCTTGTTCCAGTGA...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGACAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 2 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 2 (lower is better)
Translates to: HPKVSKSFSDALLFDANSISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFLKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp GGTGAAAGAGATCAAACGGAGATACGCAGAAGTTCAAGAAGTCCTCGCCTGGGTGTAGGTTTTGAGCACTaGATTCCTTTAAGAATGCTA +
Preference number: 2 (lower is better)
Translates to: GERDQTEIRRSSRSPRLGVGFEH*IPLRML
Trigger: TAGCATTCTTAAAGGAATGCAGTGCTCAAAACCTAC...ACCCAGGCGAGGACTTCTTGAACTTCTGCGTATCTCCGTTTGATCTCTTTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR GCA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGGTAGGTTTTGAGCACTaGATTCCTTTAAGAATGCTA +
Preference number: 2 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQVGFEH*IPLRML
Trigger: TAGCATTCTTAAAGGAATGCAGTGCTCAAAACCTAC...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR GCA 90 bp TTTCCTTCTGCTGAAGGGAAATTGACCATCAATTCATGTTATGACCTTGGCTTTGTGCTTTTTACCCGGTaGTCTTCAGTCACTTGCCCC +
Preference number: 2 (lower is better)
Translates to: FPSAEGKLTINSCYDLGFVLFTR*SSVTCP
Trigger: GGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCAC...AAAGCCAAGGTCATAACATGAATTGATGGTCAATTTCCCTTCAGCAGAAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAAGAATTCACAAGTCTCTaGTCTGAGCCCCTTCTTGAG +
Preference number: 2 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQEFTSL*SEPLLE
Trigger: CTCAAGAAGGGGCTCAGAGCAGAGACTTGTGAATTC...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp CGGATACTTTTTAATACATCTAGTCTAAAACTTACAGGAAGGCATCCTAGCACCTTTGGGGACTTCCTGTaGAGCTCTGAACCCTGTTGC +
Preference number: 2 (lower is better)
Translates to: RILFNTSSLKLTGRHPSTFGDFL*SSEPCC
Trigger: GCAACAGGGTTCAGAGCTGCACAGGAAGTCCCCAAA...GGTGCTAGGATGCCTTCCTGTAAGTTTTAGACTAGATGTATTAAAAAGTATCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR GCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCATGTGCGTGCTACGTGTaGATTTTCCCCTTGGAAACA +
Preference number: 2 (lower is better)
Translates to: IFHPKVSKSFSDALLFDACACYV*IFPLET
Trigger: TGTTTCCAAGGGGAAAATGCACACGTAGCACGCACA...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 2 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 2 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGACCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 2 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGACCACGATCAGCAACATaGCATTCTTCCGTCATTATT +
Preference number: 2 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGPRSAT*HSSVII
Trigger: AATAATGACGGAAGAATGCCATGTTGCTGATCGTGG...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCGCCTCCGCATCTGTaGGCACACCTGACCAAGAAT +
Preference number: 2 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDSPPHL*AHLTKN
Trigger: ATTCTTGGTCAGGTGTGCCCACAGATGCGGAGGCGA...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp ACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGAACAGAAGAAGAAACACAGCTGCACATaGAATGGAACCTTCATTTCC +
Preference number: 2 (lower is better)
Translates to: TSPGNPKLHSGELQEQKKKHSCT*NGTFIS
Trigger: GGAAATGAAGGTTCCATTCCATGTGCAGCTGTGTTT...CTTCTTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp ACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGAACAGAAGAAGATTTTTAAAGAGCTCTaGGGAAGTGTGGTTGTCCCA +
Preference number: 2 (lower is better)
Translates to: TSPGNPKLHSGELQEQKKIFKEL*GSVVVP
Trigger: TGGGACAACCACACTTCCCCAGAGCTCTTTAAAAAT...CTTCTTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR TCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 2 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCACGATGCACTGCTATTTaGTGCAAACTCCTGCAACAA +
Preference number: 2 (lower is better)
Translates to: IFHPKVSKSFSDALLFDARCTAI*CKLLQQ
Trigger: TTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCG...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp CGCAGGATCCACAACAACAAAAGTGTCAACTTTTTACGGCCCTTTCAAACAGATAAGCACCATTTTAAGTaGGGCACAACAAAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: RRIHNNKSVNFLRPFQTDKHHFK*GTTKVG
Trigger: TCCCACCTTTGTTGTGCCTCACTTAAAATGGTGCTT...ATCTGTTTGAAAGGGCCGTAAAAAGTTGACACTTTTGTTGTTGTGGATCCTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR GCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCCAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 2 (lower is better)
Translates to: HPKVSKSFSDALLFDANSQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGCACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 2 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 2 (lower is better)
Translates to: IFPILSSIQKSPKASAMHASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAAGCTAAACGTGTTGGCTaGTGCTCTTATAAAAGCCAG +
Preference number: 2 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQAKRVG*CSYKSQ
Trigger: CTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGC...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 2 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 2 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 2 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 2 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 2 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCTSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp TTTAAAAATTCGCTTCTGCTCTCTTGGGATTTCTTGTGGCTTGGGTGTGTGTCCAATTTGGGTAGGTTTTaGGCACTGCATTCCTTTAAG +
Preference number: 2 (lower is better)
Translates to: FKNSLLLSWDFLWLGCVSNLGRF*ALHSFK
Trigger: CTTAAAGGAATGCAGTGCTCAAAACCTACCCAAATT...GGACACACACCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR TCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATTCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAG +
Preference number: 2 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYSRTLG*VPSAVQ
Trigger: CTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGA...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR GCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGCAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 2 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCACAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 2 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 2 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp TTCCTTGGAGGTGGGTTGGCTACTCTACTGTATAGTACAACAAGTAGAACGAAAGTTTTTGGCGTCACCTaGTGGCTTTATCTTCCTTTA +
Preference number: 2 (lower is better)
Translates to: FLGGGLATLLYSTTSRTKVFGVT*WLYLPL
Trigger: TAAAGGAAGATAAAGCCAGCAGGTGACGCCAAAAAC...TTTCGTTCTACTTGTTGTACTATACAGTAGAGTAGCCAACCCACCTCCAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTCCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 2 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 2 (lower is better)
Translates to: HPKVSKSFSDALLFDANSKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCCTCCACTTTATACCTTaGCACACAACACAGGAATTT +
Preference number: 2 (lower is better)
Translates to: HPKVSKSFSDALLFDANSLHFIP*HTTQEF
Trigger: AAATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAG...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACCCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 2 (lower is better)
Translates to: IFPILSSIQKSPKASAMHPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 2 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGTSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATAAGAAATTGCACTGCTaGAGGATGAGGGCAGCACTG +
Preference number: 2 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDKKLHC*RMRAAL
Trigger: CAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTT...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp AAAAGAGGCAGATACGTGACAGGTGGAAATCTTTTTCTGTATATAACTGGGAATAGAGAAGGGAACTGTTaGTTCAGAGAGGAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: KRGRYVTGGNLFLYITGNREGNC*FREEGR
Trigger: CCTGCCTTCCTCTCTGAACCAACAGTTCCCTTCTCT...ATTCCCAGTTATATACAGAAAAAGATTTCCACCTGTCACGTATCTGCCTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CCA 90 bp CGCAGGATCCACAACAACAAAAGTGTCAACTTTTTACGGCCCTTTCAAACAGATCTACTGTTACTTCATTaGCTCCACAGCTTCAGTTTG +
Preference number: 2 (lower is better)
Translates to: RRIHNNKSVNFLRPFQTDLLLLH*LHSFSL
Trigger: CAAACTGAAGCTGTGGAGCCAATGAAGTAACAGTAG...ATCTGTTTGAAAGGGCCGTAAAAAGTTGACACTTTTGTTGTTGTGGATCCTGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CCA 90 bp TTTTATGGAAACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGACACTTATCACTGTCTTaGTGGTATCCATTCTCTGGT +
Preference number: 2 (lower is better)
Translates to: FYGNISRKSQAAQWRITGHLSLS*WYPFSG
Trigger: ACCAGAGAATGGATACCACCAAGACAGTGATAAGTG...TCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGTTTCCATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATCGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 2 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYRRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CAA 90 bp GTTTGCGGTCAGACCAGATGGAAGTTTGTATCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTT +
Preference number: 2 (lower is better)
Translates to: VCGQTRWKFVSFQSS*HAIPLKGIRNKDRV
Trigger: AACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGACTGAAATGATACAAACTTCCATCTGGTCTGACCGCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR TCA 90 bp AAAAGAGGCAGATACGTGACAGGTGGAAATCTTTTTCTGTATATAACTGGGAATGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 2 (lower is better)
Translates to: KRGRYVTGGNLFLYITGNVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...ATTCCCAGTTATATACAGAAAAAGATTTCCACCTGTCACGTATCTGCCTCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR TCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTCGATGCACTGCTATTTaGTGCAAACTCCTGCAACAA +
Preference number: 2 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIRCTAI*CKLLQQ
Trigger: TTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCG...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTCACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 2 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCCACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 2 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp ATGCCGCTGATTATTTTTAATGATTTTGTGCTATGGTTTGACCACAGCATTAAGCAAAAGTCAGCGGTATaGCCAGGAGTGTTCATTCCC +
Preference number: 2 (lower is better)
Translates to: MPLIIFNDFVLWFDHSIKQKSAV*PGVFIP
Trigger: GGGAATGAACACTCCTGGGCATACCGCTGACTTTTG...CTTAATGCTGTGGTCAAACCATAGCACAAAATCATTAAAAATAATCAGCGGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 2 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 2 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAAGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 2 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 2 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 2 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 2 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAATACAATAACCCACAATaGCTTATTACCACGATCAGC +
Preference number: 2 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQYNNPQ*LITTIS
Trigger: GCTGATCGTGGTAATAAGCCATTGTGGGTTATTGTA...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATAATCCTGCGGGAATTTaGGTAGGTTTTGAGCACTGC +
Preference number: 2 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDNPAGI*VGFEHC
Trigger: GCAGTGCTCAAAACCTACCCAAATTCCCGCAGGATT...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTCAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 2 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 2 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 2 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTCCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 2 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 2 (lower is better)
Translates to: IFHPKVSKSFSDALLFDATSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TTTCCTTCTGCTGAAGGGAAATTGACCATCAATTCATGTTATGACCTTGGCTTTCCACGATCAGCAACATaGCATTCTTCCGTCATTATT +
Preference number: 2 (lower is better)
Translates to: FPSAEGKLTINSCYDLGFPRSAT*HSSVII
Trigger: AATAATGACGGAAGAATGCCATGTTGCTGATCGTGG...AAAGCCAAGGTCATAACATGAATTGATGGTCAATTTCCCTTCAGCAGAAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp ATGCCGCTGATTATTTTTAATGATTTTGTGCTATGGTTTGACCACAGCATTAAGAATCCTGCGGGAATTTaGGTAGGTTTTGAGCACTGC +
Preference number: 2 (lower is better)
Translates to: MPLIIFNDFVLWFDHSIKNPAGI*VGFEHC
Trigger: GCAGTGCTCAAAACCTACCCAAATTCCCGCAGGATT...CTTAATGCTGTGGTCAAACCATAGCACAAAATCATTAAAAATAATCAGCGGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CCA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGTCTCCTTTTAAGAGTTaGACTAGTTCTGTGGATGTT +
Preference number: 2 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRSPFKS*TSSVDV
Trigger: AACATCCACAGAACTAGTCCAACTCTTAAAAGGAGA...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATCACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 2 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 2 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACCATATTTCAACAGTATaGAGAATAACCACCTTGCAT +
Preference number: 2 (lower is better)
Translates to: IFPILSSIQKSPKASAMHHISTV*RITTLH
Trigger: ATGCAAGGTGGTTATTCTGCATACTGTTGAAATATG...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp CGCAGGATCCACAACAACAAAAGTGTCAACTTTTTACGGCCCTTTCAAACAGATGAAAAAGCAAACGTATaGTGGAAGATTGTGTTCTTA +
Preference number: 2 (lower is better)
Translates to: RRIHNNKSVNFLRPFQTDEKANV*WKIVFL
Trigger: TAAGAACACAATCTTCCAGCATACGTTTGCTTTTTC...ATCTGTTTGAAAGGGCCGTAAAAAGTTGACACTTTTGTTGTTGTGGATCCTGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR GCA 90 bp CGCAGGATCCACAACAACAAAAGTGTCAACTTTTTACGGCCCTTTCAAACAGATATTAGTGAATGGAAATaGAGTCCTCACGATAAATCT +
Preference number: 2 (lower is better)
Translates to: RRIHNNKSVNFLRPFQTDISEWK*SPHDKS
Trigger: AGATTTATCGTGAGGACTGCATTTCCATTCACTAAT...ATCTGTTTGAAAGGGCCGTAAAAAGTTGACACTTTTGTTGTTGTGGATCCTGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGCCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 2 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp CGCAGGATCCACAACAACAAAAGTGTCAACTTTTTACGGCCCTTTCAAACAGATAATAAGCTGATAATATaGGTCAGATGGGCAAAATTC +
Preference number: 2 (lower is better)
Translates to: RRIHNNKSVNFLRPFQTDNKLII*VRWAKF
Trigger: GAATTTTGCCCATCTGACCCATATTATCAGCTTATT...ATCTGTTTGAAAGGGCCGTAAAAAGTTGACACTTTTGTTGTTGTGGATCCTGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR TCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 2 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCAATCTCGCCAATACTGTaGACATGTGCAACACATTCA +
Preference number: 2 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSISPIL*TCATHS
Trigger: TGAATGTGTTGCACATGTCCACAGTATTGGCGAGAT...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCCCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 2 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATCTCCACTTTATACCTTaGCACACAACACAGGAATTT +
Preference number: 2 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYLHFIP*HTTQEF
Trigger: AAATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAG...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp AAAAGAGGCAGATACGTGACAGGTGGAAATCTTTTTCTGTATATAACTGGGAATACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 2 (lower is better)
Translates to: KRGRYVTGGNLFLYITGNTSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...ATTCCCAGTTATATACAGAAAAAGATTTCCACCTGTCACGTATCTGCCTCTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCTCCTTTTAAGAGTTaGACTAGTTCTGTGGATGTT +
Preference number: 2 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDSPFKS*TSSVDV
Trigger: AACATCCACAGAACTAGTCCAACTCTTAAAAGGAGA...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATCATATTTCAACAGTATaGAGAATAACCACCTTGCAT +
Preference number: 2 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDHISTV*RITTLH
Trigger: ATGCAAGGTGGTTATTCTGCATACTGTTGAAATATG...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR GCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCATCTTATAAAAGCCAGTaGTTACATCTGCAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSSYKSQ*LHLQKK
Trigger: TTTCTTCTGCAGATGTAAGCACTGGCTTTTATAAGA...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCACCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 2 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR TCA 72 bp GATCTCCGAGGCGCCCAGCCGCGGTGCGGCGCTGTCTaGAGGCCACAGGCACCCTTCCTGCGGCAGCCCGTC +
Preference number: 3 (lower is better)
Translates to: DLRGAQPRCGAV*RPQAPFLRQPV
Trigger: GACGGGCTGCCGCAGGAAGGGTGCCTGTGGCCTTCAGACAGCGCCGCACCGCGGCTGGGCGCCTCGGAGATC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678556.1
3UTR CCA 72 bp CGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCTTaGACGGCACGGGCAGGCGGGCAGCAGCCCGTGATG +
Preference number: 3 (lower is better)
Translates to: RGYLIPAQGQVP*TARAGGQQPVM
Trigger: CATCACGGGCTGCTGCCCGCCTGCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CCA 72 bp CCTTCCTGCGGCAGCCCGTCCTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACT +
Preference number: 3 (lower is better)
Translates to: PSCGSPSSRLRL*FGRLMKDRVET
Trigger: AGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCGCAGGAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678556.1
3UTR TCA 72 bp AACGTGGAGGGCAGGTGTGACCCAGGCGCGGCTACCTaGTACCGGCCCAAGGCCAGGTGCCTTGGACGGCAC +
Preference number: 3 (lower is better)
Translates to: NVEGRCDPGAAT*YRPKARCLGRH
Trigger: GTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTGGGTCACACCTGCCCTCCACGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 72 bp GAGCCTGCCAGTGACCAACGCCATGAGCCGGTCCTTTaGGGGAGGGCTTCGGACTGGGTGCCGGGTGTCTCT +
Preference number: 3 (lower is better)
Translates to: EPASDQRHEPVL*GRASDWVPGVS
Trigger: AGAGACACCCGGCACCCAGTCCGAAGCCCTCCCTCAAAGGACCGGCTCATGGCGTTGGTCACTGGCAGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR TCA 72 bp TGCAGTCTGCTGCCCCTGTGTGCGTTGCTGCGCTGGTaGTGGAGGAAAGAGGCGCCTGGGTGGTGGCCCATC +
Preference number: 3 (lower is better)
Translates to: CSLLPLCALLRW*WRKEAPGWWPI
Trigger: GATGGGCCACCACCCAGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCAGCAGACTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CAA 90 bp GACCCCAACGGCCTGACCTGCTTCAACAGCATCCAGCACAGACACGTATTCTCCCCAAGGCCAGGTGCCTaGGACGGCACGGGCAGGCGG +
Preference number: 3 (lower is better)
Translates to: DPNGLTCFNSIQHRHVFSPRPGA*DGTGRR
Trigger: CCGCCTGCCCGTGCCGTCCAAGGCACCTGGCCTTGG...GGAGAATACGTGTCTGTGCTGGATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 72 bp CCTCCATCCTCCCGTTACTGCTGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGGGTGGGCATGGACCCC +
Preference number: 3 (lower is better)
Translates to: PPSSRYCCRCLH*CPSCCWVGMDP
Trigger: GGGGTCCATGCCCACCCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCAGCAGTAACGGGAGGATGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR TCA 72 bp ATCTGTAGGTGGAGAGATGAACGTGGAGGGCAGGTGTaGCCCAGGCGCGGCTACCTGATACCGGCCCAAGGC +
Preference number: 3 (lower is better)
Translates to: ICRWRDERGGQV*PRRGYLIPAQG
Trigger: GCCTTGGGCCGGTATCAGGTAGCCGCGCCTGGGTCACACCTGCCCTCCACGTTCATCTCTCCACCTACAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 72 bp TGGTTCGGTTGGGTGGGGCCCTCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAGGGTCCCGGAGCTGCA +
Preference number: 3 (lower is better)
Translates to: WFGWVGPSRTLG*VPSAVQGPGAA
Trigger: TGCAGCTCCGGGACCCTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAGGGCCCCACCCAACCGAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR GCA 72 bp GGTTGGGGAGGGTCCTTCTGGCCCCAAGCCAATCTCTaGCCTGAGAGCTGGTGTCTCTCCAGCAGAGGCCTT +
Preference number: 3 (lower is better)
Translates to: GWGGSFWPQANL*PESWCLSSRGL
Trigger: AAGGCCTCTGCTGGAGAGACACCAGCTCTCAGGGCAGAGATTGGCTTGGGGCCAGAAGGACCCTCCCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTaGCAGCAGGGCCCGATGGGAACACGGGCTCCTCAT +
Preference number: 3 (lower is better)
Translates to: VGTPDQESTASP*QQGPMGTRAPH
Trigger: ATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp GCTGAAACTGCAGTCTGCTGCCCCTGTGTGCGTTGCTaGGCTGGTGATGGAGGAAAGAGGCGCCTGGGTGGT +
Preference number: 3 (lower is better)
Translates to: AETAVCCPCVRC*AGDGGKRRLGG
Trigger: ACCACCCAGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CCA 72 bp TCTTTCCAAGATCCTCCAGAGACCGGGCGGCGGTGGTaGCAGGAAGACGGGTGGGGGCAGGAGTTGGAATCT +
Preference number: 3 (lower is better)
Translates to: SFQDPPETGRRW*QEDGWGQELES
Trigger: AGATTCCAACTCCTGCCCCCACCCGTCTTCCTGCCACCACCGCCGCCCGGTCTCTGGAGGATCTTGGAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CCA 72 bp GCAGAACATTGCAATGTCACAGAAATGGCCGCCCACTaGCCACGAAGCCCTGGCCCCACCCTGCGAGGTCAC +
Preference number: 3 (lower is better)
Translates to: AEHCNVTEMAAH*PRSPGPTLRGH
Trigger: GTGACCTCGCAGGGTGGGGCCAGGGCTTCGTGGCCAGTGGGCGGCCATTTCTGTGACATTGCAATGTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 72 bp TGGGCGAACTCCAGCTCCGTAACAGCGATGGAGCCGTaGACAGAGCACTCCCTGGAGAGGCCCCCATTTAGC +
Preference number: 3 (lower is better)
Translates to: WANSSSVTAMEP*TEHSLERPPFS
Trigger: GCTAAATGGGGGCCTCTCCAGGGAGTGCTCTGTTCACGGCTCCATCGCTGTTACGGAGCTGGAGTTCGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677304.1
3UTR GCA 72 bp CCCGTGATGACTGGACGGACTAGGGAATCCCTCGAATaGAGACTCCACGAGCCCGTCCAGCTGGAGTGGCAT +
Preference number: 3 (lower is better)
Translates to: PVMTGRTRESLE*RLHEPVQLEWH
Trigger: ATGCCACTCCAGCTGGACGGGCTCGTGGAGTCTGCATTCGAGGGATTCCCTAGTCCGTCCAGTCATCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 72 bp TCTGCTGAAACTGCAGTCTGCTGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGAAAGAGGCGCCTGGGT +
Preference number: 3 (lower is better)
Translates to: SAETAVCCPCVR*CAGDGGKRRLG
Trigger: ACCCAGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CCA 72 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGG +
Preference number: 3 (lower is better)
Translates to: CAQEGPSGRFPS*FLSPAEVHVGR
Trigger: CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp CTCACGGACTCTCGGTTGAGTTCCATCTGCTGTTCAGGGTCCCGGAGCTGCAGGGGGGCATGCATGATCTaGCCAAATCCCAGCGCATCC +
Preference number: 3 (lower is better)
Translates to: LTDSRLSSICCSGSRSCRGACMI*PNPSAS
Trigger: GGATGCGCTGGGATTTGGCAAGATCATGCATGCCCC...CCTGCAGCTCCGGGACCCTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR CCA 72 bp ATCTCTGTGATCTGTAGCGGTGCTGGCAGCTGGCGGTaGTGGAAATGGCGAACGGTAAGCCACGCAGCTGCT +
Preference number: 3 (lower is better)
Translates to: ISVICSGAGSWR*WKWRTVSHAAA
Trigger: AGCAGCTGCGTGGCTTACCGTTCGCCATTTCCACCACCGCCAGCTGCCAGCACCGCTACAGATCACAGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 72 bp AAACGATCCACGCAGAACATTGCAATGTCACAGAAATaGCCGCCCACTGGCCACGAAGCCCTGGCCCCACCC +
Preference number: 3 (lower is better)
Translates to: KRSTQNIAMSQK*PPTGHEALAPP
Trigger: GGGTGGGGCCAGGGCTTCGTGGCCAGTGGGCGGCCATTTCTGTGACATTGCAATGTTCTGCGTGGATCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CCA 72 bp AAGAGTCACAGGGCGAAGAGCACTGCGGCCTGCACTTaGATCTGGTCACCAGTGACATCGTCCAGTCCTCGG +
Preference number: 3 (lower is better)
Translates to: KSHRAKSTAACT*IWSPVTSSSPR
Trigger: CCGAGGACTGGACGATGTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGTGCTCTTCGCCCTGTGACTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR-3UTR CAA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATAGGGTGTCTCCAGGGTaGGGGAGGGTCCTTCTGGCC +
Preference number: 3 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYRVSPG*GRVLLA
Trigger: GGCCAGAAGGACCCTCCCCAACCCTGGAGACACCCT...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp ATTGTTCTGCTGAAACTGCAGTCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATGGAGGAAAGAGGCGCC +
Preference number: 3 (lower is better)
Translates to: IVLLKLQSAAPV*VAALVMEERGA
Trigger: GGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGCAGAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CCA 72 bp GTTCACATCTCTGTGATCTGTAGCGGTGCTGGCAGCTaGCGGTGGTGGAAATGGCGAACGGTAAGCCACGCA +
Preference number: 3 (lower is better)
Translates to: VHISVICSGAGS*RWWKWRTVSHA
Trigger: TGCGTGGCTTACCGTTCGCCATTTCCACCACCGCCAGCTGCCAGCACCGCTACAGATCACAGAGATGTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CAA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 3 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTCTGACTGTCCAGTTCTaGCCTTCAGTACAAAAGCTG +
Preference number: 3 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPLTVQF*PSVQKL
Trigger: CAGCTTTTGTACTGAAGGCAAGAACTGGACAGTCAG...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGACAACTCTTGGGGTTaGGAACAGTCTCTCCAGTTA +
Preference number: 3 (lower is better)
Translates to: VGTPDQESTASPCQQGPMDNSWG*EQSLQL
Trigger: TAACTGGAGAGACTGTTCCAAACCCCAAGAGTTGTC...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp AACTCCAAGAGTCACAGGGCGAAGAGCACTGCGGCCTaGACTTGGATCTGGTCACCAGTGACATCGTCCAGT +
Preference number: 3 (lower is better)
Translates to: NSKSHRAKSTAA*TWIWSPVTSSS
Trigger: ACTGGACGATGTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGTGCTCTTCGCCCTGTGACTCTTGGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR-3UTR CAA 90 bp TGCTGCCCCTGTGTGCGTTGCTGCGCTGGTGATGGAGGAAAGAGGCGCCTGGGTTCTCCACTTTATACCTaGGCACACAACACAGGAATT +
Preference number: 3 (lower is better)
Translates to: CCPCVRCCAGDGGKRRLGSPLYT*AHNTGI
Trigger: AATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGA...ACCCAGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CAA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGTCATTCCAGCTCATCTaGTTATGTGAAGAGGCCACA +
Preference number: 3 (lower is better)
Translates to: VGTPDQESTASPCQQGPMSFQLI*LCEEAT
Trigger: TGTGGCCTCTTCACATAACAAGATGAGCTGGAATGA...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp CTCCTGGGAGTTTCTGTGCGTGCTACGTGTGCATTTTCCCCTTGGAAACAGAACCACTGCGGCCTGCACTaGGATCTGGTCACCAGTGAC +
Preference number: 3 (lower is better)
Translates to: LLGVSVRATCAFSPWKQNHCGLH*DLVTSD
Trigger: GTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGTG...GTTCTGTTTCCAAGGGGAAAATGCACACGTAGCACGCACAGAAACTCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR TCA 72 bp TGGAGAAGCCCTAAGAACGAAGGGACCCCAACGGCCTaGCCTGCTTCAACAGCATCCAGCACAGACACGTAT +
Preference number: 3 (lower is better)
Translates to: WRSPKNEGTPTA*PASTASSTDTY
Trigger: ATACGTGTCTGTGCTGGATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTCCCTTCGTTCTTAGGGCTTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 72 bp CCACATGTTGGCTGGGCCTGCTTGGCTACTGCACAGTaGACTTGTCGCATTTCCTTCCTGTCTCTGTCCTCC +
Preference number: 3 (lower is better)
Translates to: PHVGWACLATAQ*TCRISFLSLSS
Trigger: GGAGGACAGAGACAGGAAGGAAATGCGACAAGTTCACTGTGCAGTAGCCAAGCAGGCCCAGCCAACATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 72 bp CAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAATCAGACCAGGTTCCC +
Preference number: 3 (lower is better)
Translates to: QRPLPFLVSFSS*SARWKESDQVP
Trigger: GGGAACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR GCA 72 bp TTGTGCTCTCTGCATTGTTCTGCTGAAACTGCAGTCTaGTGCCCCTGTGTGCGTTGCTGCGCTGGTGATGGA +
Preference number: 3 (lower is better)
Translates to: LCSLHCSAETAV*CPCVRCCAGDG
Trigger: TCCATCACCAGCGCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGAGAGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CCA 72 bp TCAAGAAGTCCTCGCCTGGGTACAAAATTCCTCTGCTaGTGTCAGGAGGCCTCCCCCATTTACTGTTGGCCC +
Preference number: 3 (lower is better)
Translates to: SRSPRLGTKFLC*CQEASPIYCWP
Trigger: GGGCCAACAGTAAATGGGGGAGGCCTCCTGACACCAGCAGAGGAATTTTGTACCCAGGCGAGGACTTCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 72 bp CCAGATGTGTTATGTATGCCCTCAAAGACCCTATCATaGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTT +
Preference number: 3 (lower is better)
Translates to: PDVLCMPSKTLS*VRGQGLGPSCV
Trigger: AACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATAGGGTCTTTGAGGGCATACATAACACATCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CAA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCCATTTTAACTGCATGTaGTGCTTTTTACCCGGTGCT +
Preference number: 3 (lower is better)
Translates to: NPLQVPASRARWEHGLLIHFNCM*CFLPGA
Trigger: AGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp ACCAACGCCATGAGCCGGTCCTTTGAGGGAGGGCTTCGGACTGGGTGCCGGGTGTCTGCTGAAGGGAAATaGACCATCAATTCATGTTAT +
Preference number: 3 (lower is better)
Translates to: TNAMSRSFEGGLRTGCRVSAEGK*TINSCY
Trigger: ATAACATGAATTGATGGTCAATTTCCCTTCAGCAGA...CACCCGGCACCCAGTCCGAAGCCCTCCCTCAAAGGACCGGCTCATGGCGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR TCA 72 bp GTGGTGGAAATGGCGAACGGTAAGCCACGCAGCTGCTaGGAACTAGCATTTAGGATCTGGGCTGGAAGCAAC +
Preference number: 3 (lower is better)
Translates to: VVEMANGKPRSC*ELAFRIWAGSN
Trigger: GTTGCTTCCAGCCCAGATCCTAAATGCTAGTTCTCAGCAGCTGCGTGGCTTACCGTTCGCCATTTCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 72 bp CCTCATCTTTGCCTGACAGAGGAAGAGAGGCTAATCTaGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGT +
Preference number: 3 (lower is better)
Translates to: PHLCLTEEERLI*RASEPSGCLQG
Trigger: ACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTCTTCCTCTGTCAGGCAAAGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR CCA 72 bp GAAATGATGGAATCACTCACCTCGCCTCCGCATCTGTaGGCACACCTGACCAAGAATCCACTGCAAGTCCCT +
Preference number: 3 (lower is better)
Translates to: EMMESLTSPPHL*AHLTKNPLQVP
Trigger: AGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCACAGATGCGGAGGCGAGGTGAGTGATTCCATCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR CCA 72 bp CAAAGGTGGGAGCATCAAGTGCAGGAGGGGGCGGCTTaGTTCCTATATCTGCTGAACTCAGAACATGAGGCA +
Preference number: 3 (lower is better)
Translates to: QRWEHQVQEGAA*FLYLLNSEHEA
Trigger: TGCCTCATGTTCTGAGTTCAGCAGATATAGGAACCAAGCCGCCCCCTCCTGCACTTGATGCTCCCACCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 72 bp ATGGAATGGAACCTTCATTTCCACAGGGGAGAGTGGTaGCTTCTGAGGCTCTCATCCCACAGCCAGTCTGTC +
Preference number: 3 (lower is better)
Translates to: MEWNLHFHRGEW*LLRLSSHSQSV
Trigger: GACAGACTGGCTGTGGGATGAGAGCCTCAGAAGCCACCACTCTCCCCTGTGGAAATGAAGGTTCCATTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CCA 72 bp ACCATCACCGTGACCACCACGACGATGATGATGATTTaGGCGAACTCCAGCTCCGCACTGGTTGAGTTTCCT +
Preference number: 3 (lower is better)
Translates to: TITVTTTTMMMI*ANSSSALVEFP
Trigger: AGGAAACTCAACCAGTGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678556.1
3UTR-3UTR CAA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTTCTCCACTTTATACCTaGGCACACAACACAGGAATT +
Preference number: 3 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSSPLYT*AHNTGI
Trigger: AATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGA...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp CTGCTGGGTGGGCATGGACCCCCGCTATACATAGCAATGTCTATTAAATCACTGTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 3 (lower is better)
Translates to: LLGGHGPPLYIAMSIKSLSNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...CAGTGATTTAATAGACATTGCTATGTATAGCGGGGGTCCATGCCCACCCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR TCA 72 bp GGTGCTCTTCAGTCACTTGCCCCCTCCACTGTTCTCTaGCTGTCCAGTTCTTGCCTTCAGTACAAAAGCTGG +
Preference number: 3 (lower is better)
Translates to: GALQSLAPSTVL*LSSSCLQYKSW
Trigger: CCAGCTTTTGTACTGAAGGCAAGAACTGGACAGTCAGAGAACAGTGGAGGGGGCAAGTGACTGAAGAGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR TCA 72 bp TGGGTTCACTACCTTTGGGGACTTCCTGTGCAGCTCTaGACCCTGTTGCAGCACTTATCACTGTCTTGGTGG +
Preference number: 3 (lower is better)
Translates to: WVHYLWGLPVQL*TLLQHLSLSWW
Trigger: CCACCAAGACAGTGATAAGTGCTGCAACAGGGTTCAGAGCTGCACAGGAAGTCCCCAAAGGTAGTGAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 72 bp AGTTCAAGAAGTCCTCGCCTGGGTACAAAATTCCTCTaGTGGTGTCAGGAGGCCTCCCCCATTTACTGTTGG +
Preference number: 3 (lower is better)
Translates to: SSRSPRLGTKFL*WCQEASPIYCW
Trigger: CCAACAGTAAATGGGGGAGGCCTCCTGACACCAGCAGAGGAATTTTGTACCCAGGCGAGGACTTCTTGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR GCA 72 bp CCCGATGATGGGTTCACTACCTTTGGGGACTTCCTGTaGAGCTCTGAACCCTGTTGCAGCACTTATCACTGT +
Preference number: 3 (lower is better)
Translates to: PDDGFTTFGDFL*SSEPCCSTYHC
Trigger: ACAGTGATAAGTGCTGCAACAGGGTTCAGAGCTGCACAGGAAGTCCCCAAAGGTAGTGAACCCATCATCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 72 bp GCTTGGGCTCCTGGGAGTTTCTGTGCGTGCTACGTGTaGATTTTCCCCTTGGAAACAGAACACACTAGGAAC +
Preference number: 3 (lower is better)
Translates to: AWAPGSFCACYV*IFPLETEHTRN
Trigger: GTTCCTAGTGTGTTCTGTTTCCAAGGGGAAAATGCACACGTAGCACGCACAGAAACTCCCAGGAGCCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR CCA 72 bp TGCACCAGAGCCTTCCTAAAAAGAAGAGCCGCTGGATaGAAGATAGAGGATGGCCCCTGTCAGAGAAGGGAA +
Preference number: 3 (lower is better)
Translates to: CTRAFLKRRAAG*KIEDGPCQRRE
Trigger: TTCCCTTCTCTGACAGGGGCCATCCTCTATCTTCCATCCAGCGGCTCTTCTTTTTAGGAAGGCTCTGGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 72 bp CCATTCTCTGGTCTTCTTCCTCTACAGAGTGAGCCCTaGGTCAACGCCTTGTTCATCCACAGTGTCTCAGCA +
Preference number: 3 (lower is better)
Translates to: PFSGLLPLQSEP*VNALFIHSVSA
Trigger: TGCTGAGACACTGTGGATGAACAAGGCGTTGACCCAGGGCTCACTCTGTAGAGGAAGAAGACCAGAGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CCA 72 bp AATGGAGAGCTGTGGGTAATGGAAAGCTTGGGCTCCTaGGAGTTTCTGTGCGTGCTACGTGTGCATTTTCCC +
Preference number: 3 (lower is better)
Translates to: NGELWVMESLGS*EFLCVLRVHFP
Trigger: GGGAAAATGCACACGTAGCACGCACAGAAACTCCCAGGAGCCCAAGCTTTCCATTACCCACAGCTCTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR-3UTR CAA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 3 (lower is better)
Translates to: PAAASLLGFFLQLKCTLETQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGAAGCACGCGGCATTCTaGGTCAGTGTGAGCAGGAGA +
Preference number: 3 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQKHAAF*VSVSRR
Trigger: TCTCCTGCTCACACTGACCAAGAATGCCGCGTGCTT...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CAA 90 bp GGAGAAGCCCTAAGAACGAAGGGACCCCAACGGCCTGACCTGCTTCAACAGCATTGTCTCTCACTTTCTTaGGCTCTCTATCTCTCAGAG +
Preference number: 3 (lower is better)
Translates to: GEALRTKGPQRPDLLQQHCLSLS*ALYLSE
Trigger: CTCTGAGAGATAGAGAGCCAAAGAAAGTGAGAGACA...ATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTCCCTTCGTTCTTAGGGCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CAA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 3 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp AGAGCTAGAGCTGTGGGGTGCATCTCCTGCTTCACCAAAACTGCAGGTGAGAACACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 3 (lower is better)
Translates to: RARAVGCISCFTKTAGENTQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...GTTCTCACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp GAATTACAGGAACAGAAGAAGTGGTGTGAAGTCTGTCGGTCTCTTCCCTGGTTCTCTGGGGAAGTGTGGTaGTCCCACCTTAGGCTCCTA +
Preference number: 3 (lower is better)
Translates to: ELQEQKKWCEVCRSLPWFSGEVW*SHLRLL
Trigger: TAGGAGCCTAAGGTGGGACAACCACACTTCCCCAGA...GAACCAGGGAAGAGACCGACAGACTTCACACCACTTCTTCTGTTCCTGTAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CAA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGATCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 3 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGSNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR TCA 72 bp GTGGTATCCATTCTCTGGTCTTCTTCCTCTACAGAGTaGGCCCTGGGTCAACGCCTTGTTCATCCACAGTGT +
Preference number: 3 (lower is better)
Translates to: VVSILWSSSSTE*ALGQRLVHPQC
Trigger: ACACTGTGGATGAACAAGGCGTTGACCCAGGGCTCACTCTGTAGAGGAAGAAGACCAGAGAATGGATACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR TCA 72 bp TTGATGGGTACTATTGTGCTCTCTGCATTGTTCTGCTaGAACTGCAGTCTGCTGCCCCTGTGTGCGTTGCTG +
Preference number: 3 (lower is better)
Translates to: LMGTIVLSALFC*NCSLLPLCALL
Trigger: CAGCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTACCCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR GCA 72 bp CATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTaGCCCCTCCACTGTTCTCTGACTGTCCAGTTCTTG +
Preference number: 3 (lower is better)
Translates to: HVVLFTRCSSVT*PLHCSLTVQFL
Trigger: CAAGAACTGGACAGTCAGAGAACAGTGGAGGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp CCTTCTCCACGCGCAGTGTCTGCTAAACGTGTTGGCTaGTGCTCTTATAAAAGCCAGTGCTTACATCTGCAG +
Preference number: 3 (lower is better)
Translates to: PSPRAVSAKRVG*CSYKSQCLHLQ
Trigger: CTGCAGATGTAAGCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACACTGCGCGTGGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp TCCTACACCGGGAACAAGGGACAAAAGTCAGCGGTATaGCCAGGAGTGTTCATTCCCACCAAATGTTCTTCC +
Preference number: 3 (lower is better)
Translates to: SYTGNKGQKSAV*PGVFIPTKCSS
Trigger: GGAAGAACATTTGGTGGGAATGAACACTCCTGGGCATACCGCTGACTTTTGTCCCTTGTTCCCGGTGTAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp GCCTTGTTCATCCACAGTGTCTCAGCAGGTAGTGTGTaGCTGGCACAAAGTTGGCATTCCCCATTTAGAAGC +
Preference number: 3 (lower is better)
Translates to: ALFIHSVSAGSV*LAQSWHSPFRS
Trigger: GCTTCTAAATGGGGAATGCCAACTTTGTGCCAGGCACACACTACCTGCTGAGACACTGTGGATGAACAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CCA 72 bp AAACGGAGATACGCAGAAGTTCAAGAAGTCCTCGCCTaGGTACAAAATTCCTCTGCTGGTGTCAGGAGGCCT +
Preference number: 3 (lower is better)
Translates to: KRRYAEVQEVLA*VQNSSAGVRRP
Trigger: AGGCCTCCTGACACCAGCAGAGGAATTTTGTACCCAGGCGAGGACTTCTTGAACTTCTGCGTATCTCCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 72 bp TGGGTGCCGGGTGTCTCTCTACTAGCAATCAGTATCTaGCCTGAGGACATATTTGAAGTGCTCTGCACCAGA +
Preference number: 3 (lower is better)
Translates to: WVPGVSLLAISI*PEDIFEVLCTR
Trigger: TCTGGTGCAGAGCACTTCAAATATGTCCTCAGGCCAGATACTGATTGCTAGTAGAGAGACACCCGGCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CAA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTTCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 3 (lower is better)
Translates to: PTLHMAECTADKPFSTRSSFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCACTCCAGGATATTCCTaGGGCCTGATTACAATCCAC +
Preference number: 3 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSTPGYS*GLITIH
Trigger: GTGGATTGTAATCAGGCCCAAGGAATATCCTGGAGT...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp AGTATCTGGCCTGAGGACATATTTGAAGTGCTCTGCACCAGAGCCTTCCTAAAAGTGCTCTTCAGTCACTaGCCCCCTCCACTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: SIWPEDIFEVLCTRAFLKVLFSH*PPPLFS
Trigger: AGAGAACAGTGGAGGGGGCAAGTGACTGAAGAGCAC...TTTTAGGAAGGCTCTGGTGCAGAGCACTTCAAATATGTCCTCAGGCCAGATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR TCA 72 bp TGCATCTCCTGCTTCACCAAAACTGCAGGTGAGAACTaGAATGATGGAATCACTCACCTCGCCTCCGCATCT +
Preference number: 3 (lower is better)
Translates to: CISCFTKTAGEN*NDGITHLASAS
Trigger: AGATGCGGAGGCGAGGTGAGTGATTCCATCATTTCAGTTCTCACCTGCAGTTTTGGTGAAGCAGGAGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR TCA 72 bp AGTTCGAGAAGCAGCAGCAGCAGCAGCAGCAGCAAATaGCTGTCTGACCCTGGCAGTAACATAAACTTGAAC +
Preference number: 3 (lower is better)
Translates to: SSRSSSSSSSSK*LSDPGSNINLN
Trigger: GTTCAAGTTTATGTTACTGCCAGGGTCAGACAGTCATTTGCTGCTGCTGCTGCTGCTGCTGCTTCTCGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR TCA 72 bp GAGCCCGTCCAGCTGGAGTGGCATCTCCTCACTTTATaGAAGCCCAAGCCTTCATCCACTACAATTACTTCT +
Preference number: 3 (lower is better)
Translates to: EPVQLEWHLLTL*KPKPSSTTITS
Trigger: AGAAGTAATTGTAGTGGATGAAGGCTTGGGCTTTCATAAAGTGAGGAGATGCCACTCCAGCTGGACGGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 72 bp TCTCCACGCGCAGTGTCTGCTAAACGTGTTGGCTGCTaGTCTTATAAAAGCCAGTGCTTACATCTGCAGAAG +
Preference number: 3 (lower is better)
Translates to: SPRAVSAKRVGC*SYKSQCLHLQK
Trigger: CTTCTGCAGATGTAAGCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACACTGCGCGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp ACCTTTGGGGACTTCCTGTGCAGCTCTGAACCCTGTTaGAGCACTTATCACTGTCTTGGTGGTATCCATTCT +
Preference number: 3 (lower is better)
Translates to: TFGDFLCSSEPC*STYHCLGGIHS
Trigger: AGAATGGATACCACCAAGACAGTGATAAGTGCTGCAACAGGGTTCAGAGCTGCACAGGAAGTCCCCAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CAA 90 bp TTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCTCCAACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 3 (lower is better)
Translates to: LTACCAFYPVLFSHLPPPTQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...TGGAGGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp TTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCTCCAGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 3 (lower is better)
Translates to: LTACCAFYPVLFSHLPPPAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...TGGAGGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATTGTCTGCTAAACGTGTaGGCTGCTGCTCTTATAAAA +
Preference number: 3 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYCLLNV*AAALIK
Trigger: TTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACA...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp ATCAGTATCTGGCCTGAGGACATATTTGAAGTGCTCTaGACCAGAGCCTTCCTAAAAAGAAGAGCCGCTGGA +
Preference number: 3 (lower is better)
Translates to: ISIWPEDIFEVL*TRAFLKRRAAG
Trigger: TCCAGCGGCTCTTCTTTTTAGGAAGGCTCTGGTGCAGAGCACTTCAAATATGTCCTCAGGCCAGATACTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR GCA 72 bp AGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTaGACCCTACAGTATACGATGGAAACAACACGTGGG +
Preference number: 3 (lower is better)
Translates to: SEPQFLMMNPKG*TLQYTMETTRG
Trigger: CCCACGTGTTGTTTCCATCGTATACTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR GCA 72 bp CCTATCTTTGCCTTTGATGGGTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTGCAGTCTGCTGCCCCT +
Preference number: 3 (lower is better)
Translates to: PIFAFDGYYCAL*IVLLKLQSAAP
Trigger: AGGGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTACCCATCAAAGGCAAAGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CCA 72 bp CACACACACGCGGATTTGGCTTTAAGGCTGCATAGGTaGGAGTCATGGAATCATCATTCCAGCTCATCTTGT +
Preference number: 3 (lower is better)
Translates to: HTHADLALRLHR*ESWNHHSSSSC
Trigger: ACAAGATGAGCTGGAATGATGATTCCATGACTCCCACCTATGCAGCCTTAAAGCCAAATCCGCGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR CCA 72 bp GAAGCAGAAGGGAACAGACTAGGATCAGACAACTCTTaGGGTTTGGAACAGTCTCTCCAGTTACAGCACAGA +
Preference number: 3 (lower is better)
Translates to: EAEGNRLGSDNS*GLEQSLQLQHR
Trigger: TCTGTGCTGTAACTGGAGAGACTGTTCCAAACCCCAAGAGTTGTCTGATCCTAGTCTGTTCCCTTCTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR CCA 72 bp TGGGTCAGATGGGCAAAATTCCACGAACTGCTCTTATaGACAACACTCGAAAGGATGCCCACACCCAAGATT +
Preference number: 3 (lower is better)
Translates to: WVRWAKFHELLL*TTLERMPTPKI
Trigger: AATCTTGGGTGTGGGCATCCTTTCGAGTGTTGTCCATAAGAGCAGTTCGTGGAATTTTGCCCATCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CAA 90 bp CGCAGGATCCACAACAACAAAAGTGTCAACTTTTTACGGCCCTTTCAAACAGATGTGCTCTTCAGTCACTaGCCCCCTCCACTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: RRIHNNKSVNFLRPFQTDVLFSH*PPPLFS
Trigger: AGAGAACAGTGGAGGGGGCAAGTGACTGAAGAGCAC...ATCTGTTTGAAAGGGCCGTAAAAAGTTGACACTTTTGTTGTTGTGGATCCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CAA 90 bp CGCAGGATCCACAACAACAAAAGTGTCAACTTTTTACGGCCCTTTCAAACAGATGGGATTCAAGATGCCTaGGGTCTCCTACACCGGGAA +
Preference number: 3 (lower is better)
Translates to: RRIHNNKSVNFLRPFQTDGIQDA*GLLHRE
Trigger: TTCCCGGTGTAGGAGACCCAAGGCATCTTGAATCCC...ATCTGTTTGAAAGGGCCGTAAAAAGTTGACACTTTTGTTGTTGTGGATCCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CAA 90 bp ACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGAACAGAAGAAGGGCCAAGTAAACACCTaGGCAGGAATCCAGAAAACG +
Preference number: 3 (lower is better)
Translates to: TSPGNPKLHSGELQEQKKGQVNT*AGIQKT
Trigger: CGTTTTCTGGATTCCTGCCAAGGTGTTTACTTGGCC...CTTCTTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CAA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 3 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGTQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp CGCAGGATCCACAACAACAAAAGTGTCAACTTTTTACGGCCCTTTCAAACAGATGGCCTGAGGACATATTaGAAGTGCTCTGCACCAGAG +
Preference number: 3 (lower is better)
Translates to: RRIHNNKSVNFLRPFQTDGLRTY*KCSAPE
Trigger: CTCTGGTGCAGAGCACTTCAAATATGTCCTCAGGCC...ATCTGTTTGAAAGGGCCGTAAAAAGTTGACACTTTTGTTGTTGTGGATCCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CAA 90 bp TCTTCCTTTAAAAGCTCTTTCCTAAGCCCCGATGATGGGTTCACTACCTTTGGGGCACTTATCACTGTCTaGGTGGTATCCATTCTCTGG +
Preference number: 3 (lower is better)
Translates to: SSFKSSFLSPDDGFTTFGALITV*VVSILW
Trigger: CCAGAGAATGGATACCACCAAGACAGTGATAAGTGC...CCCAAAGGTAGTGAACCCATCATCGGGGCTTAGGAAAGAGCTTTTAAAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CAA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGTGTGCATTTTCCCCTaGGAAACAGAACACACTAGG +
Preference number: 3 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGVCIFP*ETEHTR
Trigger: CCTAGTGTGTTCTGTTTCCAAGGGGAAAATGCACAC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR GCA 72 bp GCTGGAAGATTGTGTTCTTATAGATGGGATTCAAGATaGCTTGGGTCTCCTACACCGGGAACAAGGGACAAA +
Preference number: 3 (lower is better)
Translates to: AGRLCSYRWDSR*LGSPTPGTRDK
Trigger: TTTGTCCCTTGTTCCCGGTGTAGGAGACCCAAGGCATCTTGAATCCCATCTATAAGAACACAATCTTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp TCCACGAACTGCTCTTATGGACAACACTCGAAAGGATaGCCACACCCAAGATTCAACCGTGGTTTTAGTGAA +
Preference number: 3 (lower is better)
Translates to: STNCSYGQHSKG*PHPRFNRGFSE
Trigger: TTCACTAAAACCACGGTTGAATCTTGGGTGTGGGCATCCTTTCGAGTGTTGTCCATAAGAGCAGTTCGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 72 bp TTTGCTTTTTGGGTCCGTATTATGATGGGACATGAATaGGAATGGATGAGAGGTCCTTCACTTGGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: FAFWVRIMMGHE*EWMRGPSLGWL
Trigger: CAGCCAGCCAAGTGAAGGACCTCTCATCCATTCCCATTCATGTCCCATCATAATACGGACCCAAAAAGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CAA 90 bp TTCCCAGGCTTCCTATCTTTGCCTTTGATGGGTACTATTGTGCTCTCTGCATTGCCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 3 (lower is better)
Translates to: FPGFLSLPLMGTIVLSALPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...CAATGCAGAGAGCACAATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR-3UTR CAA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGACCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 3 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCACTCCAGGATATTCCTaGGGCCTGATTACAATCCAC +
Preference number: 3 (lower is better)
Translates to: HPKVSKSFSDALLFDANSTPGYS*GLITIH
Trigger: GTGGATTGTAATCAGGCCCAAGGAATATCCTGGAGT...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCCAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGT +
Preference number: 3 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCQLKCT*EGIRPG
Trigger: ACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTG...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CCA 72 bp GCGGATTTGGCTTTAAGGCTGCATAGGTGGGAGTCATaGAATCATCATTCCAGCTCATCTTGTTATGTGAAG +
Preference number: 3 (lower is better)
Translates to: ADLALRLHRWES*NHHSSSSCYVK
Trigger: CTTCACATAACAAGATGAGCTGGAATGATGATTCCATGACTCCCACCTATGCAGCCTTAAAGCCAAATCCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCTCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 3 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPSFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 3 (lower is better)
Translates to: IFHPKVSKSFSDALLFDATQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAACTCCAGGATATTCCTaGGGCCTGATTACAATCCAC +
Preference number: 3 (lower is better)
Translates to: IFHPKVSKSFSDALLFDATPGYS*GLITIH
Trigger: GTGGATTGTAATCAGGCCCAAGGAATATCCTGGAGT...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 3 (lower is better)
Translates to: IFPILSSIQKSPKASAMHAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 3 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCACTGACTGTCCAGTTCTaGCCTTCAGTACAAAAGCTG +
Preference number: 3 (lower is better)
Translates to: IFHPKVSKSFSDALLFDALTVQF*PSVQKL
Trigger: CAGCTTTTGTACTGAAGGCAAGAACTGGACAGTCAG...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGGACAACTCTTGGGGTTaGGAACAGTCTCTCCAGTTA +
Preference number: 3 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRDNSWG*EQSLQL
Trigger: TAACTGGAGAGACTGTTCCAAACCCCAAGAGTTGTC...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp TTTTATGGAAACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGATACTGCACAGTGAACTaGTCGCATTTCCTTCCTGTC +
Preference number: 3 (lower is better)
Translates to: FYGNISRKSQAAQWRITGYCTVN*SHFLPV
Trigger: GACAGGAAGGAAATGCGACAAGTTCACTGTGCAGTA...TCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGTTTCCATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR-3UTR CAA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTCTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCA +
Preference number: 3 (lower is better)
Translates to: FACNSPKRNQKQRPCLLILTDSR*SSICCS
Trigger: TGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CCA 72 bp CTGGTGCCTGTGTTTTTCCTCTCTCCTTTTAAGAGTTaGACTAGTTCTGTGGATGTTACTGTGTGCAAAGGA +
Preference number: 3 (lower is better)
Translates to: LVPVFFLSPFKS*TSSVDVTVCKG
Trigger: TCCTTTGCACACAGTAACATCCACAGAACTAGTCCAACTCTTAAAAGGAGAGAGGAAAAACACAGGCACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp ATGGCTTATTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGCCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 3 (lower is better)
Translates to: MAYYHDQQHGILPSLFLGPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...CCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAATAAGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACCCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 3 (lower is better)
Translates to: IFPILSSIQKSPKASAMHPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAATCATTCCAGCTCATCTaGTTATGTGAAGAGGCCACA +
Preference number: 3 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQSFQLI*LCEEAT
Trigger: TGTGGCCTCTTCACATAACAAGATGAGCTGGAATGA...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATGACGATGATGATGATTaGGGCGAACTCCAGCTCCGC +
Preference number: 3 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYDDDDD*GELQLR
Trigger: GCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTC...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678556.1
3UTR TCA 72 bp ACTGTATATACTTCCACACAGGTTGTAAGCATGAGCTaGCAACTGGTGCCTGTGTTTTTCCTCTCTCCTTTT +
Preference number: 3 (lower is better)
Translates to: TVYTSTQVVSMS*QLVPVFFLSPF
Trigger: AAAAGGAGAGAGGAAAAACACAGGCACCAGTTGTCAGCTCATGCTTACAACCTGTGTGGAAGTATATACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp GCAGTCCTCACGATAAATCTTTTAAAAATTCGCTTCTaGTCTCTTGGGATTTCTTGTGGCTTGGGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: AVLTINLLKIRF*SLGISCGLGVC
Trigger: ACACACACCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAAAAGATTTATCGTGAGGACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CCA 72 bp ATAACCCACAATGGCTTATTACCACGATCAGCAACATaGCATTCTTCCGTCATTATTTCTAGGGGCTTCCAA +
Preference number: 3 (lower is better)
Translates to: ITHNGLLPRSAT*HSSVIISRGFQ
Trigger: TTGGAAGCCCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAATAAGCCATTGTGGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAGACCAGATGGAAGTTaGTATCATTTCAGTCTAGTT +
Preference number: 3 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHRPDGS*YHFSLV
Trigger: AACTAGACTGAAATGATACAAACTTCCATCTGGTCT...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTACTCCAGGATATTCCTaGGGCCTGATTACAATCCAC +
Preference number: 3 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFTPGYS*GLITIH
Trigger: GTGGATTGTAATCAGGCCCAAGGAATATCCTGGAGT...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 3 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp ATGCCGCTGATTATTTTTAATGATTTTGTGCTATGGTTTGACCACAGCATTAAGGGCCTGAGGACATATTaGAAGTGCTCTGCACCAGAG +
Preference number: 3 (lower is better)
Translates to: MPLIIFNDFVLWFDHSIKGLRTY*KCSAPE
Trigger: CTCTGGTGCAGAGCACTTCAAATATGTCCTCAGGCC...CTTAATGCTGTGGTCAAACCATAGCACAAAATCATTAAAAATAATCAGCGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR TCA 72 bp GGTTTGGTAGAATCCTGCGGGAATTTGGGTAGGTTTTaGGCACTGCATTCCTTTAAGAATGCTATGCTAATA +
Preference number: 3 (lower is better)
Translates to: GLVESCGNLGRF*ALHSFKNAMLI
Trigger: TATTAGCATAGCATTCTTAAAGGAATGCAGTGCTCAAAACCTACCCAAATTCCCGCAGGATTCTACCAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR TCA 72 bp TATGAACAGGTCAGCCACAACCTTCAAAAGAGCTACTaGTCTAAATCACCTTTTCCTTCTGCTGAAGGGAAA +
Preference number: 3 (lower is better)
Translates to: YEQVSHNLQKSY*SKSPFPSAEGK
Trigger: TTTCCCTTCAGCAGAAGGAAAAGGTGATTTAGATCAGTAGCTCTTTTGAAGGTTGTGGCTGACCTGTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp TCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCTGCAACAATAATGACT +
Preference number: 3 (lower is better)
Translates to: SIQKSPKASAMH*YLMQTPATIMT
Trigger: AGTCATTATTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCTCTCCACTTTATACCTaGGCACACAACACAGGAATT +
Preference number: 3 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFSPLYT*AHNTGI
Trigger: AATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGA...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATATCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 3 (lower is better)
Translates to: FHTLGEKANWLVLPHNNISFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp TTCCTTGGAGGTGGGTTGGCTACTCTACTGTATAGTACAACAAGTAGAACGAAAAGTGGTGCTGGAGTTTaGCTAAAGGTTTTCATATTT +
Preference number: 3 (lower is better)
Translates to: FLGGGLATLLYSTTSRTKSGAGV*LKVFIF
Trigger: AAATATGAAAACCTTTAGCAAAACTCCAGCACCACT...TTTCGTTCTACTTGTTGTACTATACAGTAGAGTAGCCAACCCACCTCCAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR GCA 72 bp AGTAACATAAACTTGAACTCTGCAAAGGACACAGCGTaGCGGGTAATAAAGAATGCTGAAATATTGGTTCCT +
Preference number: 3 (lower is better)
Translates to: SNINLNSAKDTA*RVIKNAEILVP
Trigger: AGGAACCAATATTTCAGCATTCTTTATTACCCGGCACGCTGTGTCCTTTGCAGAGTTCAAGTTTATGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR-3UTR CAA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATCCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 3 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR-3UTR CAA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTAGACCAGATGGAAGTTaGTATCATTTCAGTCTAGTT +
Preference number: 3 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIRPDGS*YHFSLV
Trigger: AACTAGACTGAAATGATACAAACTTCCATCTGGTCT...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
3UTR TCA 72 bp AAATTCCAATCCTCAAAACAAACAAACAAAAACCAGTaGCCTATCTACAGAGGTAAGAAGCAGAAGGGAACA +
Preference number: 3 (lower is better)
Translates to: KFQSSKQTNKNQ*PIYRGKKQKGT
Trigger: TGTTCCCTTCTGCTTCTTACCTCTGTAGATAGGTCACTGGTTTTTGTTTGTTTGTTTTGAGGATTGGAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp GAATTATGTAATTATCTCGCCAATACTGTGGACATGTaGAACACATTCATATACTCACAGTTACTAAGGAAT +
Preference number: 3 (lower is better)
Translates to: ELCNYLANTVDM*NTFIYSQLLRN
Trigger: ATTCCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAGATAATTACATAATTC
35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR GCA 72 bp TTAAAGTGTTTTCACAGCAAAGATGCAACTTTCCATTaGTATATATACGCTGGTCATAAACTGTTGCTTGTT +
Preference number: 3 (lower is better)
Translates to: LKCFHSKDATFH*YIYAGHKLLLV
Trigger: AACAAGCAACAGTTTATGACCAGCGTATATATAGCAATGGAAAGTTGCATCTTTGCTGTGAAAACACTTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CGGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCCTGGGTGTGGCACCTaGGCGGCGGCGGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RQPVLPPPALVRAVDEGPPGCGT*AAAVPA
Trigger: AGCAGGGACCGCCGCCGCCCAGGTGCCACACCCAGG...CGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CCA 90 bp CTCTGCGGCCTCGCGCCATCGTTTCCGGTGGGCAGCACCCCTCTTGGCTCGCTCGGCGGTACCTGGGTGTaGCACCTGGGCGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: LCGLAPSFPVGSTPLGSLGGTWV*HLGGGG
Trigger: ACCGCCGCCGCCCAGGTGCCACACCCAGGTACCGCC...GAGCGAGCCAAGAGGGGTGCTGCCCACCGGAAACGATGGCGCGAGGCCGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR CCA 90 bp CAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGCGGTACCTGGGTGTaGCACCTGGGCGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: QPVLPPPALVRAVDEGPRGGTWV*HLGGGG
Trigger: ACCGCCGCCGCCCAGGTGCCACACCCAGGTACCGCC...ACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CCA 90 bp CAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTTGCTGGGCCGGCCTCTaGGAGCATCCGCGGCCCACC +
Preference number: 4 (lower is better)
Translates to: QPVLPPPALVRAVDEGPRCWAGL*EHPRPT
Trigger: GGTGGGCCGCGGATGCTCCCAGAGGCCGGCCCAGCA...ACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
3UTR CAA 72 bp GCGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCTaGGACGGCACGGGCAGGCGGGCAGCAGCCCGTGAT +
Preference number: 4 (lower is better)
Translates to: ARLPDTGPRPGA*DGTGRRAAARD
Trigger: ATCACGGGCTGCTGCCCGCCTGCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp AGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGCCCTGGCCACGCCGCTaGCAGCATCCTGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: SPSSRLRLWFGRLMKDRVPWPRR*QHPAGS
Trigger: CGACCCTGCAGGATGCTGGCAGCGGCGTGGCCAGGG...CACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CCA 90 bp CAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGAACACGGGCGCCCCTaGCCACGCCGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QPVLPPPALVRAVDEGPREHGRP*PRRCQH
Trigger: ATGCTGGCAGCGGCGTGGCCAGGGGCGCCCGTGTTC...ACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CCA 90 bp TGCGGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACGAACACGGGCGCCCCTaGCCACGCCGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: CGSPSSRLRLWFGRLMKDEHGRP*PRRCQH
Trigger: ATGCTGGCAGCGGCGTGGCCAGGGGCGCCCGTGTTC...GTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CCA 90 bp AGGCCCCCATTTAGCTCTGCGGCCTCGCGCCATCGTTTCCGGTGGGCAGCACCCTGCTGGGCCGGCCTCTaGGAGCATCCGCGGCCCACC +
Preference number: 4 (lower is better)
Translates to: RPPFSSAASRHRFRWAAPCWAGL*EHPRPT
Trigger: GGTGGGCCGCGGATGCTCCCAGAGGCCGGCCCAGCA...GGGTGCTGCCCACCGGAAACGATGGCGCGAGGCCGCAGAGCTAAATGGGGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR GCA 90 bp CAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTCCGCTGCCAGCATCCTaGAGGGTCGCACCTGCACGC +
Preference number: 4 (lower is better)
Translates to: QPVLPPPALVRAVDEGPRPLPAS*RVAPAR
Trigger: GCGTGCAGGTGCGACCCTGCAGGATGCTGGCAGCGG...ACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR GCA 90 bp GGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCATGCCCGGAGGCGGGTaGTCGGTCACCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: GSPSSRLRLWFGRLMKDRMPGGG*SVTRRQ
Trigger: CTGTCTCCTGGTGACCGAGCACCCGCCTCCGGGCAT...GCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR GCA 90 bp CAGGCGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCTTGGACGGCACGGGCGCCCTGGCCCCACCCTaGGAGGTCACTTCCTACCCT +
Preference number: 4 (lower is better)
Translates to: QARLPDTGPRPGALDGTGALAPP*EVTSYP
Trigger: AGGGTAGGAAGTGACCTCGCAGGGTGGGGCCAGGGC...GCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp GGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCCTGAGGCTGCGGAGATaGGAAGGGCACGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GSPSSRLRLWFGRLMKDRLRLRR*EGHGRP
Trigger: AGGCCTGCCGTGCCCTTCCCATCTCCGCAGCCTCAG...GCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678459.1
CDS-3UTR TCA 90 bp CTCTGCGGCCTCGCGCCATCGTTTCCGGTGGGCAGCACCCCTCTTGGCTCGCTCTCCTCCCGGCTCAGTTaGAGATGCCCGGAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LCGLAPSFPVGSTPLGSLSSRLS*RCPEAG
Trigger: ACCCGCCTCCGGGCATCTTCAACTGAGCCGGGAGGA...GAGCGAGCCAAGAGGGGTGCTGCCCACCGGAAACGATGGCGCGAGGCCGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR GCA 90 bp GTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACGCACCTGCACGCGGGTaGTCCTTGTCCCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: VLPPPALVRAVDEGPRGDAPARG*SLSQPQ
Trigger: CTGCGGCTGGGACAAGGAGCACCCGCGTGCAGGTGC...GTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR GCA 90 bp TGCGGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCTGCAGGGTCGCACCTaGACGCGGGTGCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: CGSPSSRLRLWFGRLMKDLQGRT*TRVLLV
Trigger: GACAAGGAGCACCCGCGTGCAGGTGCGACCCTGCAG...GTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR GCA 90 bp CAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTCCAAGTCCATCGCTCTaGTGGGCCGGCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QPVLPPPALVRAVDEGPRPSPSL*WAGLWE
Trigger: CTCCCAGAGGCCGGCCCAGCAGAGCGATGGACTTGG...ACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CCA 90 bp CTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTCCTGGGTGTGGCACCTaGGCGGCGGCGGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LPPPALVRAVDEGPRGDFPGCGT*AAAVPA
Trigger: AGCAGGGACCGCCGCCGCCCAGGTGCCACACCCAGG...AAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CCA 90 bp CAGGCGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCTTGGACGGCACGGGCTCAGGGGGCAAGGTCTaGGCCCCTCATGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: QARLPDTGPRPGALDGTGSGGKV*APHAFL
Trigger: GAGGAACGCATGAGGGGCCCAGACCTTGCCCCCTGA...GCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp CCTTCCTGCGGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGTCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: PSCGSPSSRLRLWFGRLMSAAPV*VAALVM
Trigger: CATCACCAGCGCAGCAACGCACACAGGGGCAGCAGA...CATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCGCAGGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR CCA 90 bp CCATTTAGCTCTGCGGCCTCGCGCCATCGTTTCCGGTGGGCAGCACCCCTCTTGCGCGGGTGGAGGGGCTaGCCCTCAGGCCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PFSSAASRHRFRWAAPLLRGWRG*PSGPQN
Trigger: GTTCTGAGGGCCTGAGGGCCAGCCCCTCCACCCGCG...CAAGAGGGGTGCTGCCCACCGGAAACGATGGCGCGAGGCCGCAGAGCTAAATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR CCA 90 bp CTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTCGCGGGTGGAGGGGCTaGCCCTCAGGCCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LPPPALVRAVDEGPRGDFRGWRG*PSGPQN
Trigger: GTTCTGAGGGCCTGAGGGCCAGCCCCTCCACCCGCG...AAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGCCTGGGTGTGGCACCTaGGCGGCGGCGGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWPGCGT*AAAVPA
Trigger: AGCAGGGACCGCCGCCGCCCAGGTGCCACACCCAGG...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTGGCGGTACCTGGGTGTaGCACCTGGGCGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPGGTWV*HLGGGG
Trigger: ACCGCCGCCGCCCAGGTGCCACACCCAGGTACCGCC...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAATGCTGGGCCGGCCTCTaGGAGCATCCGCGGCCCACC +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAECWAGL*EHPRPT
Trigger: GGTGGGCCGCGGATGCTCCCAGAGGCCGGCCCAGCA...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGCGGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACAGTCCATCGCTCTGCTaGGCCGGCCTCTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: CGSPSSRLRLWFGRLMKDSPSLC*AGLWEH
Trigger: ATGCTCCCAGAGGCCGGCCCAGCAGAGCGATGGACT...GTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR TCA 90 bp CCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGCCATGCCAGAAAGTTaGAGATGCCCGGAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: PVLPPPALVRAVDEGPRGAMPES*RCPEAG
Trigger: ACCCGCCTCCGGGCATCTTCAACTTTCTGGCATGGC...TCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678459.1
CDS-3UTR GCA 90 bp CCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTGTACCCTGGCCACGCCGCTaGCAGCATCCTGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: PPPALVRAVDEGPRGDFVPWPRR*QHPAGS
Trigger: CGACCCTGCAGGATGCTGGCAGCGGCGTGGCCAGGG...TACAAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR GCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCACCCTGGCCACGCCGCTaGCAGCATCCTGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPPWPRR*QHPAGS
Trigger: CGACCCTGCAGGATGCTGGCAGCGGCGTGGCCAGGG...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTCCCTGGCCACGCCGCTaGCAGCATCCTGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPPWPRR*QHPAGS
Trigger: CGACCCTGCAGGATGCTGGCAGCGGCGTGGCCAGGG...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGACAGCTTCCGGCATACTaGTCCCCGGACAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PVLPPPALVRAVDEGPRGQLPAY*SPDKPV
Trigger: CACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCTG...TCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR GCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCCGCTCCCAGAGCGTaGTCGCCCGGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWSAPRA*SPGWEH
Trigger: GTGCTCCCAGCCGGGCGAGCACGCTCTGGGAGCGGA...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR CCA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGCGCGGGTGGAGGGGCTaGCCCTCAGGCCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: VGTPDQESTASPCQQGPMRGWRG*PSGPQN
Trigger: GTTCTGAGGGCCTGAGGGCCAGCCCCTCCACCCGCG...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCCTGGGTGTGGCACCTaGGCGGCGGCGGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFPGCGT*AAAVPA
Trigger: AGCAGGGACCGCCGCCGCCCAGGTGCCACACCCAGG...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTCCTGGGTGTGGCACCTaGGCGGCGGCGGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLPGCGT*AAAVPA
Trigger: AGCAGGGACCGCCGCCGCCCAGGTGCCACACCCAGG...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCGGCGGTACCTGGGTGTaGCACCTGGGCGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCGGTWV*HLGGGG
Trigger: ACCGCCGCCGCCCAGGTGCCACACCCAGGTACCGCC...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGCGGTACCTGGGTGTaGCACCTGGGCGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLGGTWV*HLGGGG
Trigger: ACCGCCGCCGCCCAGGTGCCACACCCAGGTACCGCC...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTGGCGGTACCTGGGTGTaGCACCTGGGCGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFGGTWV*HLGGGG
Trigger: ACCGCCGCCGCCCAGGTGCCACACCCAGGTACCGCC...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCTGCTGGGCCGGCCTCTaGGAGCATCCGCGGCCCACC +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASCWAGL*EHPRPT
Trigger: GGTGGGCCGCGGATGCTCCCAGAGGCCGGCCCAGCA...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCGCGTGCTCGCCCGGCTaGGAGCACCCACAGCGTCCC +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCACSPG*EHPQRP
Trigger: GGGACGCTGTGGGTGCTCCCAGCCGGGCGAGCACGC...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR CCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTGCGTGCTCGCCCGGCTaGGAGCACCCACAGCGTCCC +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLACSPG*EHPQRP
Trigger: GGGACGCTGTGGGTGCTCCCAGCCGGGCGAGCACGC...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR CCA 90 bp CAGGCGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCTTGGACGGCACGGGCTGGCAGGAAGACGGGTaGGGGCAGGAGTTGGAATCT +
Preference number: 4 (lower is better)
Translates to: QARLPDTGPRPGALDGTGWQEDG*GQELES
Trigger: AGATTCCAACTCCTGCCCCCACCCGTCTTCCTGCCA...GCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp GCCCTCAAAGACCCTATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTGAGACCGGGCGGCGGTaGTGGCAGGAAGACGGGTGG +
Preference number: 4 (lower is better)
Translates to: ALKDPIMGQGARSGPLMRETGRR*WQEDGW
Trigger: CCACCCGTCTTCCTGCCACCACCGCCGCCCGGTCTC...ACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATAGGGTCTTTGAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTCGGTGCGGCGCTGTCTaGAGGCCACAGGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPRCGAV*RPQAPF
Trigger: GAAGGGTGCCTGTGGCCTTCAGACAGCGCCGCACCG...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGACCGCGGGGCATGCATaGTCTCCGAGGCGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVTAGHA*SPRRPA
Trigger: GGCTGGGCGCCTCGGAGATCATGCATGCCCCGCGGT...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000587757.5
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACCGCGGGGCATGCATaGTCTCCGAGGCGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCTAGHA*SPRRPA
Trigger: GGCTGGGCGCCTCGGAGATCATGCATGCCCCGCGGT...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000587757.5
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AACAGCAGCACCCCACCTCACTCCCCTACGTGCTGGCCTTTCCTGGAGCACCAACGTGGAGGGCAGGTGTaGCCCAGGCGCGGCTACCTG +
Preference number: 4 (lower is better)
Translates to: NSSTPPHSPTCWPFLEHQRGGQV*PRRGYL
Trigger: CAGGTAGCCGCGCCTGGGTCACACCTGCCCTCCACG...TTGGTGCTCCAGGAAAGGCCAGCACGTAGGGGAGTGAGGTGGGGTGCTGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTCCCGGAGCTGCAGGGTaGAGGGCCCCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPPGAAG*RAPGKE
Trigger: CTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGG...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCCTGCAGGGTCGCACCTaGACGCGGGTGCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSLQGRT*TRVLLV
Trigger: GACAAGGAGCACCCGCGTGCAGGTGCGACCCTGCAG...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTGCTGCAGGGTCGCACCTaGACGCGGGTGCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SRLRLWFGRLMKDRVETLLQGRT*TRVLLV
Trigger: GACAAGGAGCACCCGCGTGCAGGTGCGACCCTGCAG...CAAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR GCA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCCCGCTGCCAGCATCCTaGAGGGTCGCACCTGCACGC +
Preference number: 4 (lower is better)
Translates to: NPLQVPASRARWEHGLLIPLPAS*RVAPAR
Trigger: GCGTGCAGGTGCGACCCTGCAGGATGCTGGCAGCGG...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTGTACCGCTGCCAGCATCCTaGAGGGTCGCACCTGCACGC +
Preference number: 4 (lower is better)
Translates to: PPPALVRAVDEGPRGDFVPLPAS*RVAPAR
Trigger: GCGTGCAGGTGCGACCCTGCAGGATGCTGGCAGCGG...TACAAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR GCA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGCCGCTGCCAGCATCCTaGAGGGTCGCACCTGCACGC +
Preference number: 4 (lower is better)
Translates to: VGTPDQESTASPCQQGPMPLPAS*RVAPAR
Trigger: GCGTGCAGGTGCGACCCTGCAGGATGCTGGCAGCGG...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTCCCTGGCCACGCCGCTaGCAGCATCCTGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLPWPRR*QHPAGS
Trigger: CGACCCTGCAGGATGCTGGCAGCGGCGTGGCCAGGG...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTGCGGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACTGTGCTCCAACTCTTaGGCTGTCCCGTCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LRQPVLPPPALVRAVDEGLCSNS*AVPSRK
Trigger: CTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAG...TCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR GCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCACTGGACCGCGGGGCATaGATGATCTGCGGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPLDRGA*MICGSP
Trigger: CGGGCTGCCGCAGATCATGCATGCCCCGCGGTCCAG...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399848.7
ENST00000678400.1
CDS-3UTR GCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCCAGCGTCCCTCAGGCTaGGAGCCAGGCTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCQRPSG*EPGCGL
Trigger: CAGCCCGCAGCCTGGCTCGCAGCCTGAGGGACGCTG...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR GCA 90 bp AACAGCAGCACCCCACCTCACTCCCCTACGTGCTGGCCTTTCCTGGAGCACCAACCCCTGCACGCCTCCTaGCCCACCGCTGGGACAGAC +
Preference number: 4 (lower is better)
Translates to: NSSTPPHSPTCWPFLEHQPLHAS*PTAGTD
Trigger: GTCTGTCCCAGCGGTGGGGCAGGAGGCGTGCAGGGG...TTGGTGCTCCAGGAAAGGCCAGCACGTAGGGGAGTGAGGTGGGGTGCTGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTGCCCGAGTTGCTGCTaGGTGGGCATGGACCCCCGC +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWCPSCC*VGMDPR
Trigger: GCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCA...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTTGCCCGAGTTGCTGCTaGGTGGGCATGGACCCCCGC +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPACPSCC*VGMDPR
Trigger: GCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCA...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACCAACGCCATGAGCCGGTCCTTTGAGGGAGGGCTTCGGACTGGGTGCCGGGTGGAGGCGCCTGGGTGGTaGCCCATCACCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: TNAMSRSFEGGLRTGCRVEAPGW*PITSLY
Trigger: ATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTC...CACCCGGCACCCAGTCCGAAGCCCTCCCTCAAAGGACCGGCTCATGGCGTTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTGAACACGGGCGCCCCTaGCCACGCCGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGEHGRP*PRRCQH
Trigger: ATGCTGGCAGCGGCGTGGCCAGGGGCGCCCGTGTTC...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCGAACACGGGCGCCCCTaGCCACGCCGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCEHGRP*PRRCQH
Trigger: ATGCTGGCAGCGGCGTGGCCAGGGGCGCCCGTGTTC...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGGAGAGGCCCCCATTTAGCTCTGCGGCCTCGCGCCATCGTTTCCGGTGGGCAGAGTCCATCGCTCTGCTaGGCCGGCCTCTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: WRGPHLALRPRAIVSGGQSPSLC*AGLWEH
Trigger: ATGCTCCCAGAGGCCGGCCCAGCAGAGCGATGGACT...CTGCCCACCGGAAACGATGGCGCGAGGCCGCAGAGCTAAATGGGGGCCTCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR CCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCGCACCGTCCCAGGTaGAGCGCCGGGTATCCTCGG +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPSHRPR*SAGYPR
Trigger: CCGAGGATACCCGGCGCTCCACCTGGGACGGTGCGA...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679091.1
CDS-3UTR TCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCGGTGCGGCGCTGTCTaGAGGCCACAGGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGRCGAV*RPQAPF
Trigger: GAAGGGTGCCTGTGGCCTTCAGACAGCGCCGCACCG...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTCGGTGCGGCGCTGTCTaGAGGCCACAGGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLRCGAV*RPQAPF
Trigger: GAAGGGTGCCTGTGGCCTTCAGACAGCGCCGCACCG...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTCGGTGCGGCGCTGTCTaGAGGCCACAGGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLRCGAV*RPQAPF
Trigger: GAAGGGTGCCTGTGGCCTTCAGACAGCGCCGCACCG...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTGGGTGACCCCGCTCTGTaGGTGGCAGAAAGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: SRLRLWFGRLMKDRVETLGDPAL*VAESAR
Trigger: GCGAGCACTTTCTGCCACTCACAGAGCGGGGTCACC...CAAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678459.1
CDS-3UTR GCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTGGACCGCGGGGCATaGATGATCTCCGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVLDRGA*MISEAP
Trigger: GGGCGCCTCGGAGATCATGCATGCCCCGCGGTCCAG...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000587757.5
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTCACGGACTCTCGGTTGAGTTCCATCTGCTGTTCAGGGTCCCGGAGCTGCAGGCCCGGAGCTGCAGGGTaGAGGGCCCCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: LTDSRLSSICCSGSRSCRPGAAG*RAPGKE
Trigger: CTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGG...CCTGCAGCTCCGGGACCCTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR GCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTCCCGGAGCTGCAGGGTaGAGGGCCCCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSPGAAG*RAPGKE
Trigger: CTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGG...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCCCGGAGCTGCAGGGTaGAGGGCCCCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGPGAAG*RAPGKE
Trigger: CTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGG...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTGGGGGCCGGGCTCCCTaGGCCCACAGCAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSGGRAP*AHSRMS
Trigger: AGACATTCTGCTGTGGGCGCAGGGAGCCCGGCCCCC...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCGCACCTGCACGCGGGTaGTCCTTGTCCCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASAPARG*SLSQPQ
Trigger: CTGCGGCTGGGACAAGGAGCACCCGCGTGCAGGTGC...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTGCACCTGCACGCGGGTaGTCCTTGTCCCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLAPARG*SLSQPQ
Trigger: CTGCGGCTGGGACAAGGAGCACCCGCGTGCAGGTGC...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCCGCTGCCAGCATCCTaGAGGGTCGCACCTGCACGC +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLPLPAS*RVAPAR
Trigger: GCGTGCAGGTGCGACCCTGCAGGATGCTGGCAGCGG...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTCCCCGGACAAGCCTGTaGTCCAACTCTTGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: SSRLRLWFGRLMKDRVETPRTSL*SNSCAV
Trigger: GACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGG...AGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR GCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTCTGGACCGCGGGGCATaGATGATCTGCGGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLLDRGA*MICGSP
Trigger: CGGGCTGCCGCAGATCATGCATGCCCCGCGGTCCAG...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399848.7
ENST00000678400.1
CDS-3UTR CCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSSRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGCCGTGAACAGAGCACTCCCTGGAGAGGCCCCCATTTAGCTCTGCGGCCTCGCTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: SREQSTPWRGPHLALRPRSRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...GCGAGGCCGCAGAGCTAAATGGGGGCCTCTCCAGGGAGTGCTCTGTTCACGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR CCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGCCAGCAGGGCCCGATaGGAACACGGGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAEASRAR*EHGLLI
Trigger: GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGC...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGCGCGGGTGGAGGGGCTaGCCCTCAGGCCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLRGWRG*PSGPQN
Trigger: GTTCTGAGGGCCTGAGGGCCAGCCCCTCCACCCGCG...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCAGTCCATCGCTCTGCTaGGCCGGCCTCTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSSPSLC*AGLWEH
Trigger: ATGCTCCCAGAGGCCGGCCCAGCAGAGCGATGGACT...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAAGGACCGCGTGGAGACTTTGTAGTGGTTCAGCAGGCAGACGATGACCACCACACCGCGGGGCATGCATaGTCTCCGAGGCGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: EGPRGDFVVVQQADDDHHTAGHA*SPRRPA
Trigger: GGCTGGGCGCCTCGGAGATCATGCATGCCCCGCGGT...GTGGTGGTCATCGTCTGCCTGCTGAACCACTACAAAGTCTCCACGCGGTCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR TCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCGTTGCTGCGCTGGTaGTGGAGGAAAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPALLRW*WRKEAP
Trigger: AGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGC...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGGGAGCCTCCTGTaGACTGAGCAGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPAGSLL*TEQPCR
Trigger: TCTGCAGGGCTGCTCAGTTCACAGGAGGCTCCCAGC...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTCTGGACCGCGGGGCATaGATGATCTCCGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAALDRGA*MISEAP
Trigger: GGGCGCCTCGGAGATCATGCATGCCCCGCGGTCCAG...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000587757.5
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSCPCVR*CAGDGG
Trigger: TCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAAGCCGCAGCTCTCTGTaGTCCGCCTCTGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: PVLPPPALVRAVDEGPRGSRSSL*SASETF
Trigger: AAAAGTTTCAGAGGCGGAGCACAGAGAGCTGCGGCT...TCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR GCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTGCAGGGTCGCACCTaGACGCGGGTGCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVLQGRT*TRVLLV
Trigger: GACAAGGAGCACCCGCGTGCAGGTGCGACCCTGCAG...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCCAAGTCCATCGCTCTaGTGGGCCGGCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFPSPSL*WAGLWE
Trigger: CTCCCAGAGGCCGGCCCAGCAGAGCGATGGACTTGG...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTCCAAGTCCATCGCTCTaGTGGGCCGGCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLPSPSL*WAGLWE
Trigger: CTCCCAGAGGCCGGCCCAGCAGAGCGATGGACTTGG...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCCCAAGTCCATCGCTCTaGTGGGCCGGCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCPSPSL*WAGLWE
Trigger: CTCCCAGAGGCCGGCCCAGCAGAGCGATGGACTTGG...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTATGCCCGGAGGCGGGTaGTCGGTCACCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLMPGGG*SVTRRQ
Trigger: CTGTCTCCTGGTGACCGAGCACCCGCCTCCGGGCAT...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR GCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTCCCAGCGGCTCTTaGCACCGAGCTCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPAPSGS*HRALYW
Trigger: CCAGTACAGAGCTCGGTGGCAAGAGCCGCTGGGAGC...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR GCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCGCGTGCTTCTCCCCTaGAGATCCGCTCCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGRVLLP*RSAPRA
Trigger: CGCTCTGGGAGCGGATCTGCAGGGGAGAAGCACGCG...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR CCA 90 bp AAGGACGGCGCTGTGAACCTGTCCCTGGACCGCGGGGCATGCATGATCTTGCCATCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: KDGAVNLSLDRGACMILPSRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...TGGCAAGATCATGCATGCCCCGCGGTCCAGGGACAGGTTCACAGCGCCGTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR CCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTATGGTTCGGTTGGGTaGGGCCCTCACGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSYGSVG*GPHGLS
Trigger: CGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATA...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGGAGGCGCCTGGGTGGTaGCCCATCACCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWEAPGW*PITSLY
Trigger: ATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTC...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAGGAAAGAGGCGCCTaGGTGGTGGCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAEERGA*VVAHHL
Trigger: GAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTC...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTGAGGAAAGAGGCGCCTaGGTGGTGGCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPEERGA*VVAHHL
Trigger: GAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTC...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCGCCAGCAGGGCCCGATaGGAACACGGGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCASRAR*EHGLLI
Trigger: GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGC...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGGGAGGGCTTCGGACTaGGTGCCGGGTGTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAGRASD*VPGVSL
Trigger: TAGAGAGACACCCGGCACCCAGTCCGAAGCCCTCCC...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTAGCGGTGCTGGCAGCTaGCGGTGGTGGAAATGGCGA +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPASGAGS*RWWKWR
Trigger: TCGCCATTTCCACCACCGCCAGCTGCCAGCACCGCT...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAATGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAECRCLH*CPSCCW
Trigger: CCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCA...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCGCGTTGCTGCGCTGGTaGTGGAGGAAAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCALLRW*WRKEAP
Trigger: AGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGC...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTGCGTTGCTGCGCTGGTaGTGGAGGAAAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGALLRW*WRKEAP
Trigger: AGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGC...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGCGTTGCTGCGCTGGTaGTGGAGGAAAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLALLRW*WRKEAP
Trigger: AGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGC...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCGCTGGGAGCCTCCTGTaGACTGAGCAGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCAGSLL*TEQPCR
Trigger: TCTGCAGGGCTGCTCAGTTCACAGGAGGCTCCCAGC...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCAAAGCATTTGTGGCCTaGAAACCAGCTTCCGGCATA +
Preference number: 4 (lower is better)
Translates to: GSPSSRLRLWFGRLMKDRKAFVA*KPASGI
Trigger: TATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTT...GCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR TCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTACTCCAGCTCCGAGTTaGAGATGCCCGGAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLTPAPS*RCPEAG
Trigger: ACCCGCCTCCGGGCATCTTCAACTCGGAGCTGGAGT...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR TCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCGGGGTCTCCGATCCTaGGACCAGCTGTACACCCAG +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLRGLRS*DQLYTQ
Trigger: CTGGGTGTACAGCTGGTCTCAGGATCGGAGACCCCG...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR TCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCCGCATCCAGGAGGGCTaGGCAATGGAGAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCRIQEG*AMESCG
Trigger: CCCACAGCTCTCCATTGCTCAGCCCTCCTGGATGCG...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR GCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCATGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPCPCVR*CAGDGG
Trigger: TCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AAGGACGGCGCTGTGAACCTGTCCCTGGACCGCGGGGCATGCATGATCTTGCCATGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: KDGAVNLSLDRGACMILPCPCVR*CAGDGG
Trigger: TCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA...TGGCAAGATCATGCATGCCCCGCGGTCCAGGGACAGGTTCACAGCGCCGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR GCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWCPCVR*CAGDGG
Trigger: TCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTTCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPASAAPV*VAALVM
Trigger: CATCACCAGCGCAGCAACGCACACAGGGGCAGCAGA...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSETAVC*PCVRCC
Trigger: GCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTC...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTTCCACTGCAAGTCCCTaGCAGCAGGGCCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFSTASP*QQGPMG
Trigger: TCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGA...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTTCCACTGCAAGTCCCTaGCAGCAGGGCCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLSTASP*QQGPMG
Trigger: TCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGA...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACAGCCGCAGCTCTCTGTaGTCCGCCTCTGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: VLPPPALVRAVDEGPRGDSRSSL*SASETF
Trigger: AAAAGTTTCAGAGGCGGAGCACAGAGAGCTGCGGCT...GTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR GCA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTCTGCAGGGTCGCACCTaGACGCGGGTGCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: PTLHMAECTADKPFSTRSLQGRT*TRVLLV
Trigger: GACAAGGAGCACCCGCGTGCAGGTGCGACCCTGCAG...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGACCGCTGCCAGCATCCTaGAGGGTCGCACCTGCACGC +
Preference number: 4 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGPLPAS*RVAPAR
Trigger: GCGTGCAGGTGCGACCCTGCAGGATGCTGGCAGCGG...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGCCCCGGACAAGCCTGTaGTCCAACTCTTGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWPRTSL*SNSCAV
Trigger: GACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGG...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTGTACAGCTTCCGGCATACTaGTCCCCGGACAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PPPALVRAVDEGPRGDFVQLPAY*SPDKPV
Trigger: CACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCTG...TACAAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR GCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCAATTCAACACACGCCTaGTTCCTCCGGGGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSNSTHA*FLRGSE
Trigger: CTCCGAGCCCCGGAGGAAGCAGGCGTGTGTTGAATT...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399848.7
ENST00000677055.1
CDS-3UTR GCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTCACAAAGGCAAGTaGCGGGCCGGGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLLHKGK*RAGLGA
Trigger: AGCACCCAGCCCGGCCCGGCACTTGCCTTTGTGAAG...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399848.7
ENST00000677055.1
CDS-3UTR GCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCAGCGTCCCTCAGGCTaGGAGCCAGGCTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAAQRPSG*EPGCGL
Trigger: CAGCCCGCAGCCTGGCTCGCAGCCTGAGGGACGCTG...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR GCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTAGAAACCAGGAGCTCTaGGGCAGGAAGCCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLRNQEL*GRKPAV
Trigger: CACGGCCGGCTTCCTGCCGCAGAGCTCCTGGTTTCT...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR GCA 90 bp TGCCCCTGTGTGCGTTGCTGCGCTGGTGATGGAGGAAAGAGGCGCCTGGGTGGTAGGACAGGACAGGGCTaGCTGCTTTCTCAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: CPCVRCCAGDGGKRRLGGRTGQG*LLSQVP
Trigger: AGGGACCTGAGAAAGCAGGCAGCCCTGTCCTGTCCT...ACCACCCAGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR GCA 90 bp CTGCGGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGAGTGAGTGGCAGAAAGTaGTCGCAGGTTCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: LRQPVLPPPALVRAVDEGVSGRK*SQVPFS
Trigger: AGAGAATGGAACCTGCGAGCACTTTCTGCCACTCAC...TCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678459.1
CDS-3UTR CCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGSRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTCCCCTGGTAAGGAGGTaGCTCTTCACCGTCGGACAG +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAPLVRR*LFTVGQ
Trigger: CTGTCCGACGGTGAAGAGCCACCTCCTTACCAGGGG...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAACCCCTGGTAAGGAGGTaGCTCTTCACCGTCGGACAG +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAEPLVRR*LFTVGQ
Trigger: CTGTCCGACGGTGAAGAGCCACCTCCTTACCAGGGG...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCACCCCTGGTAAGGAGGTaGCTCTTCACCGTCGGACAG +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPPLVRR*LFTVGQ
Trigger: CTGTCCGACGGTGAAGAGCCACCTCCTTACCAGGGG...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGCTGCTGGGTGGGCATaGACCCCCGCTATACATAGC +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAEAAGWA*TPAIHS
Trigger: GCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGC...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTCGAGTTGCTGCTGGGTaGGCATGGACCCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPRVAAG*AWTPAI
Trigger: TATAGCGGGGGTCCATGCCCACCCAGCAGCAACTCG...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGATGCCCGAGTTGCTGCTaGGTGGGCATGGACCCCCGC +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGCPSCC*VGMDPR
Trigger: GCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCA...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCGAGGCGCCTGGGTGGTaGCCCATCACCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCEAPGW*PITSLY
Trigger: ATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTC...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCGAGGCGCCTGGGTGGTaGCCCATCACCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASEAPGW*PITSLY
Trigger: ATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTC...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTGAGGAAAGAGGCGCCTaGGTGGTGGCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSEERGA*VVAHHL
Trigger: GAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTC...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTGAGGAAAGAGGCGCCTaGGTGGTGGCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFEERGA*VVAHHL
Trigger: GAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTC...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCGAGGAAAGAGGCGCCTaGGTGGTGGCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASEERGA*VVAHHL
Trigger: GAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTC...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGAGGAAAGAGGCGCCTaGGTGGTGGCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLEERGA*VVAHHL
Trigger: GAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTC...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTGCCAGCAGGGCCCGATaGGAACACGGGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: PTLHMAECTADKPFSTRSASRAR*EHGLLI
Trigger: GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGC...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGCCAGCAGGGCCCGATaGGAACACGGGCTCCTCATC +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVASRAR*EHGLLI
Trigger: GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGC...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCAGCAAGCCCCCGAGATaGGGGCGCATCCAGTCATGG +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCSKPPR*GRIQSW
Trigger: CCATGACTGGATGCGCCCCCATCTCGGGGGCTTGCT...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TGCGGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACGGGAGTTCTCGGAAATaGCCCAACAGGAGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: CGSPSSRLRLWFGRLMKDGSSRK*PNRRFD
Trigger: ATCAAACCTCCTGTTGGGCCATTTCCGAGAACTCCC...GTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CCA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGACGCGGGTGGAGGGGCTaGCCCTCAGGCCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGRGWRG*PSGPQN
Trigger: GTTCTGAGGGCCTGAGGGCCAGCCCCTCCACCCGCG...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGACCACAGTCGTTCTGTTaGTTACAGACCAGCGAACCA +
Preference number: 4 (lower is better)
Translates to: PVLPPPALVRAVDEGPRGPQSFC*LQTSEP
Trigger: TGGTTCGCTGGTCTGTAACCAACAGAACGACTGTGG...TCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGAGTGCCGGGCCGGGCTaGGTGCTTGTCGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLSAGPG*VLVASC
Trigger: ACAGGAAGCGACAAGCACCCAGCCCGGCCCGGCACT...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399848.7
ENST00000677055.1
CDS-3UTR CCA 90 bp CAGGCGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCTTGGACGGCACGGGCCAGCTGCACATGGAATaGAACCTTCATTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: QARLPDTGPRPGALDGTGQLHME*NLHFHR
Trigger: CCTGTGGAAATGAAGGTTCCATTCCATGTGCAGCTG...GCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp GCCACGAAGCCCTGGCCCCACCCTGCGAGGTCACTTCCTACCCTACCAACAGCACACTCCCCTACGTGCTaGCCTTTCCTGGAGCACCAA +
Preference number: 4 (lower is better)
Translates to: ATKPWPHPARSLPTLPTAHSPTC*PFLEHQ
Trigger: TTGGTGCTCCAGGAAAGGCCAGCACGTAGGGGAGTG...TGCTGTTGGTAGGGTAGGAAGTGACCTCGCAGGGTGGGGCCAGGGCTTCGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp CAGGCGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCTTGGACGGCACGGGCCAGGAACAGAAGAAGTaGTGTGAAGTCTGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: QARLPDTGPRPGALDGTGQEQKK*CEVCRS
Trigger: AGACCGACAGACTTCACACCACTTCTTCTGTTCCTG...GCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp CCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTGTAGATGGGTGTGGGAGATaGGCTAAGGGCGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PPPALVRAVDEGPRGDFVDGCGR*AKGGGG
Trigger: ACCACCACCGCCCTTAGCCCATCTCCCACACCCATC...TACAAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678459.1
3UTR CAA 72 bp ATGGTTCGGTTGGGTGGGGCCCTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCAGGGTCCCGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: MVRLGGALTDSR*SSICCSGSRSC
Trigger: GCAGCTCCGGGACCCTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAGGGCCCCACCCAACCGAACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR TCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSCRCLH*CPSCCW
Trigger: CCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCA...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTTGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSCRCLH*CPSCCW
Trigger: CCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCA...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCCRCLH*CPSCCW
Trigger: CCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCA...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGTGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVCRCLH*CPSCCW
Trigger: CCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCA...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTGCCCAACAGGAGGTTTaGTGTCACGAACGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: SSRLRLWFGRLMKDRVETAQQEV*CHERRA
Trigger: AGCTCTACGTTCGTGACATCAAACCTCCTGTTGGGC...AGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR TCA 90 bp CGGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGTCTGTGCTCCGCCTCTaGAACTTTTACACTATACAG +
Preference number: 4 (lower is better)
Translates to: RQPVLPPPALVRAVDEGPSVLRL*NFYTIQ
Trigger: CTGTATAGTGTAAAAGTTTCAGAGGCGGAGCACAGA...CGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR TCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTGTACTGGCAAGGCGTaGGGTCCTAACCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGCTGKA*GPNRSR
Trigger: CCTGCTGCGGTTAGGACCTCACGCCTTGCCAGTACA...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR TCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTACAGCGATGGAGCCGTaGACAGAGCACTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLTAMEP*TEHSLE
Trigger: CTCCAGGGAGTGCTCTGTTCACGGCTCCATCGCTGT...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678400.1
CDS-3UTR GCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACTGGACCGCGGGGCATaGATGATCTCCGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLELDRGA*MISEAP
Trigger: GGGCGCCTCGGAGATCATGCATGCCCCGCGGTCCAG...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000587757.5
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGCGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWRLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTTGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFCPCVR*CAGDGG
Trigger: TCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGSAAPV*VAALVM
Trigger: CATCACCAGCGCAGCAACGCACACAGGGGCAGCAGA...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPETAVC*PCVRCC
Trigger: GCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTC...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWETAVC*PCVRCC
Trigger: GCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTC...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGCTGAAACTGCAGTCTaGTGCCCCTGTGTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAEAETAV*CPCVRC
Trigger: GCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGC...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CACCATCACCGTGACCACCACGACGATGATGATGATTTGGGCGAACTCCAGCTCGCACCTGCACGCGGGTaGTCCTTGTCCCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: HHHRDHHDDDDDLGELQLAPARG*SLSQPQ
Trigger: CTGCGGCTGGGACAAGGAGCACCCGCGTGCAGGTGC...GAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR GCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACCGCTGCCAGCATCCTaGAGGGTCGCACCTGCACGC +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEPLPAS*RVAPAR
Trigger: GCGTGCAGGTGCGACCCTGCAGGATGCTGGCAGCGG...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTCTGTGCTCCAACTCTTaGGCTGTCCCGTCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPLCSNS*AVPSRK
Trigger: CTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAG...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCAGCTTCCGGCATACTaGTCCCCGGACAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGQLPAY*SPDKPV
Trigger: CACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCTG...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTCTTCACAAAGGCAAGTaGCGGGCCGGGCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVLHKGK*RAGLGA
Trigger: AGCACCCAGCCCGGCCCGGCACTTGCCTTTGTGAAG...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399848.7
ENST00000677055.1
CDS-3UTR GCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGACGCGTGCTTCTCCCCTaGAGATCCGCTCCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGRVLLP*RSAPRA
Trigger: CGCTCTGGGAGCGGATCTGCAGGGGAGAAGCACGCG...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR GCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCACGTTAGGCTCGCGTaGTTCTCCCCTGCAGATCCG +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASHVRLA*FSPADP
Trigger: CGGATCTGCAGGGGAGAAGCACGCGAGCCTAACGTG...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR GCA 90 bp TATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTTCCTCTCTTTCCCCCCTCACTCCCCTACGTaGTGGCCTTTCCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: YHGSGGKVWAPHAFLSFPPHSPT*WPFLEH
Trigger: GTGCTCCAGGAAAGGCCAGCACGTAGGGGAGTGAGG...GGGGAAAGAGAGGAACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp GTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACACGATGATGATGATTTaGGCGAACTCCAGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: VLPPPALVRAVDEGPRGDTMMMI*ANSSSA
Trigger: AGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGT...GTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678459.1
CDS-3UTR CCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAASRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAACTGAAGCGATCCCTCTaGATGAAGGACGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAELKRSL*MKDGAV
Trigger: CACAGCGCCGTCCTTCATCCAGAGGGATCGCTTCAG...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGCTGAAGCGATCCCTCTaGATGAAGGACGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWLKRSL*MKDGAV
Trigger: CACAGCGCCGTCCTTCATCCAGAGGGATCGCTTCAG...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGCTGAAGCGATCCCTCTaGATGAAGGACGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: VGTPDQESTASPCQQGPMLKRSL*MKDGAV
Trigger: CACAGCGCCGTCCTTCATCCAGAGGGATCGCTTCAG...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTATGGTTCGGTTGGGTaGGGCCCTCACGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSYGSVG*GPHGLS
Trigger: CGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATA...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTTATGGTTCGGTTGGGTaGGGCCCTCACGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLYGSVG*GPHGLS
Trigger: CGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATA...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTGCTGCTGGGTGGGCATaGACCCCCGCTATACATAGC +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLAAGWA*TPAIHS
Trigger: GCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGC...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTGCTGCTGGGTGGGCATaGACCCCCGCTATACATAGC +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSAAGWA*TPAIHS
Trigger: GCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGC...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCGCTGCTGGGTGGGCATaGACCCCCGCTATACATAGC +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASAAGWA*TPAIHS
Trigger: GCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGC...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTCGAGTTGCTGCTGGGTaGGCATGGACCCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLRVAAG*AWTPAI
Trigger: TATAGCGGGGGTCCATGCCCACCCAGCAGCAACTCG...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTCACGGACTCTCGGTTGAGTTCCATCTGCTGTTCAGGGTCCCGGAGCTGCAGGCGAGTTGCTGCTGGGTaGGCATGGACCCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: LTDSRLSSICCSGSRSCRRVAAG*AWTPAI
Trigger: TATAGCGGGGGTCCATGCCCACCCAGCAGCAACTCG...CCTGCAGCTCCGGGACCCTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCGAGTTGCTGCTGGGTaGGCATGGACCCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVRVAAG*AWTPAI
Trigger: TATAGCGGGGGTCCATGCCCACCCAGCAGCAACTCG...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCCGAGTTGCTGCTGGGTaGGCATGGACCCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCRVAAG*AWTPAI
Trigger: TATAGCGGGGGTCCATGCCCACCCAGCAGCAACTCG...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTTGGGGAGGGTCCTTCTaGCCCCAAGCCAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLWGGSF*PQANLC
Trigger: GCAGAGATTGGCTTGGGGCCAGAAGGACCCTCCCCA...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCAGTCATGGCTGCATaGGGGGCCGGGCTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGPVMAA*GAGLPA
Trigger: CGCAGGGAGCCCGGCCCCCCATGCAGCCATGACTGG...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGGCTGGCAGCTGGCGGTaGTGGAAATGGCGAACGGTA +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVAGSWR*WKWRTV
Trigger: TACCGTTCGCCATTTCCACCACCGCCAGCTGCCAGC...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGGCGGTACCTGGGTGTaGCACCTGGGCGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPAGGTWV*HLGGGG
Trigger: ACCGCCGCCGCCCAGGTGCCACACCCAGGTACCGCC...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTAGTCCATCGCTCTGCTaGGCCGGCCTCTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVSPSLC*AGLWEH
Trigger: ATGCTCCCAGAGGCCGGCCCAGCAGAGCGATGGACT...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAGGCGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCTTGGACGGCACGGGCTCCTTGGAGGTGGGTTaGCTACTCTACTGTATAGTA +
Preference number: 4 (lower is better)
Translates to: QARLPDTGPRPGALDGTGSLEVG*LLYCIV
Trigger: TACTATACAGTAGAGTAGCCAACCCACCTCCAAGGA...GCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp GCCACGAAGCCCTGGCCCCACCCTGCGAGGTCACTTCCTACCCTACCAACAGCAAGCTCTGGGGAAGTGTaGTTGTCCCACCTTAGGCTC +
Preference number: 4 (lower is better)
Translates to: ATKPWPHPARSLPTLPTASSGEV*LSHLRL
Trigger: GAGCCTAAGGTGGGACAACCACACTTCCCCAGAGCT...TGCTGTTGGTAGGGTAGGAAGTGACCTCGCAGGGTGGGGCCAGGGCTTCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTAGTGAGCATGCTCTGTaGGCATCGCACCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLSEHAL*ASHRPR
Trigger: CCTGGGACGGTGCGATGCCCACAGAGCATGCTCACT...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679091.1
CDS-3UTR TCA 90 bp TGCCCCTGTGTGCGTTGCTGCGCTGGTGATGGAGGAAAGAGGCGCCTGGGTGGTTCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: CPCVRCCAGDGGKRRLGGSRTLG*VPSAVQ
Trigger: CTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGA...ACCACCCAGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR TCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTGCACTGCTGGAGGATaGGGGCAGCACTGCATGATA +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPCTAGG*GQHCMI
Trigger: TATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCA...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAATGCACTGCTGGAGGATaGGGGCAGCACTGCATGATA +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAECTAGG*GQHCMI
Trigger: TATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCA...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAAGCATGTTCGTGGCATaGAGGCTTGGCTCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAESMFVA*RLGSKH
Trigger: GTGCTTGGAGCCAAGCCTTCATGCCACGAACATGCT...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp CAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTTCTGTGCTCCGCCTCTaGAACTTTTACACTATACAG +
Preference number: 4 (lower is better)
Translates to: QPVLPPPALVRAVDEGPRSVLRL*NFYTIQ
Trigger: CTGTATAGTGTAAAAGTTTCAGAGGCGGAGCACAGA...ACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR TCA 90 bp TCCACGCAGAACATTGCAATGTCACAGAAATGGCCGCCCACTGGCCACGAAGCCCGGGGTCTCCGATCCTaGGACCAGCTGTACACCCAG +
Preference number: 4 (lower is better)
Translates to: STQNIAMSQKWPPTGHEARGLRS*DQLYTQ
Trigger: CTGGGTGTACAGCTGGTCTCAGGATCGGAGACCCCG...GGCTTCGTGGCCAGTGGGCGGCCATTTCTGTGACATTGCAATGTTCTGCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATCCCGGAGCTGCAGGGTaGAGGGCCCCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYPGAAG*RAPGKE
Trigger: CTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGG...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTCGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLRLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVRLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSRLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAACTGCTGCAGGTGCTTaGACTGATGCCCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPTAAGA*TDARVA
Trigger: AGCAACTCGGGCATCAGTGCAAGCACCTGCAGCAGT...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFETAVC*PCVRCC
Trigger: GCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTC...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTGCTGAAACTGCAGTCTaGTGCCCCTGTGTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGAETAV*CPCVRC
Trigger: GCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGC...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGGCTGAAACTGCAGTCTaGTGCCCCTGTGTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVAETAV*CPCVRC
Trigger: GCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGC...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGCTGAAACTGCAGTCTaGTGCCCCTGTGTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLAETAV*CPCVRC
Trigger: GCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGC...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCAGCCGCAGCTCTCTGTaGTCCGCCTCTGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSSRSSL*SASETF
Trigger: AAAAGTTTCAGAGGCGGAGCACAGAGAGCTGCGGCT...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GATGATTTGGGCGAACTCCAGCTCCGTAACAGCGATGGAGCCGTGAACAGAGCACCAAGTCCATCGCTCTaGTGGGCCGGCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: DDLGELQLRNSDGAVNRAPSPSL*WAGLWE
Trigger: CTCCCAGAGGCCGGCCCAGCAGAGCGATGGACTTGG...TGCTCTGTTCACGGCTCCATCGCTGTTACGGAGCTGGAGTTCGCCCAAATCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR GCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTCCCCGGACAAGCCTGTaGTCCAACTCTTGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAAPRTSL*SNSCAV
Trigger: GACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGG...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTCAGCTTCCGGCATACTaGTCCCCGGACAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVQLPAY*SPDKPV
Trigger: CACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCTG...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAATGCCCGGAGGCGGGTaGTCGGTCACCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEMPGGG*SVTRRQ
Trigger: CTGTCTCCTGGTGACCGAGCACCCGCCTCCGGGCAT...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR GCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGGCTGTCCTCTTCTGGTaGTCCCTCTCCACATCCTCT +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWAVLFW*SLSTSS
Trigger: AGAGGATGTGGAGAGGGAGCACCAGAAGAGGACAGC...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR GCA 90 bp CAGGCGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCTTGGACGGCACGGGCCTGGTTACTCTGAGCTaGCTGTTTATAGCCATGTAT +
Preference number: 4 (lower is better)
Translates to: QARLPDTGPRPGALDGTGLVTLS*LFIAMY
Trigger: ATACATGGCTATAAACAGGCAGCTCAGAGTAACCAG...GCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp GAAGGACCGCGTGGAGACTTTGTAGTGGTTCAGCAGGCAGACGATGACCACCACTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: EGPRGDFVVVQQADDDHHSRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...GTGGTGGTCATCGTCTGCCTGCTGAACCACTACAAAGTCTCCACGCGGTCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677304.1
ENST00000678459.1
ENST00000678556.1
CDS-3UTR CCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTGAAGCGATCCCTCTaGATGAAGGACGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVLKRSL*MKDGAV
Trigger: CACAGCGCCGTCCTTCATCCAGAGGGATCGCTTCAG...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTCACGGACTCTCGGTTGAGTTCCATCTGCTGTTCAGGGTCCCGGAGCTGCAGGCTGAAGCGATCCCTCTaGATGAAGGACGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: LTDSRLSSICCSGSRSCRLKRSL*MKDGAV
Trigger: CACAGCGCCGTCCTTCATCCAGAGGGATCGCTTCAG...CCTGCAGCTCCGGGACCCTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCTGAAGCGATCCCTCTaGATGAAGGACGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGLKRSL*MKDGAV
Trigger: CACAGCGCCGTCCTTCATCCAGAGGGATCGCTTCAG...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGCCCCTGGTAAGGAGGTaGCTCTTCACCGTCGGACAG +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLPLVRR*LFTVGQ
Trigger: CTGTCCGACGGTGAAGAGCCACCTCCTTACCAGGGG...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTCAAATATGGTTCGGTTaGGTGGGGCCCTCACGGACT +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPQIWFG*VGPSRT
Trigger: AGTCCGTGAGGGCCCCACCCAACCGAACCATATTTG...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTCAAATATGGTTCGGTTaGGTGGGGCCCTCACGGACT +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAQIWFG*VGPSRT
Trigger: AGTCCGTGAGGGCCCCACCCAACCGAACCATATTTG...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTGCTGCTGGGTGGGCATaGACCCCCGCTATACATAGC +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAAAAGWA*TPAIHS
Trigger: GCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGC...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCTGCCCGAGTTGCTGCTaGGTGGGCATGGACCCCCGC +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGCPSCC*VGMDPR
Trigger: GCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCA...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTGGGGAGGGTCCTTCTaGCCCCAAGCCAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAAWGGSF*PQANLC
Trigger: GCAGAGATTGGCTTGGGGCCAGAAGGACCCTCCCCA...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTCGCCTCCGCATCTGTaGGCACACCTGACCAAGAAT +
Preference number: 4 (lower is better)
Translates to: NPLQVPASRARWEHGLLISPPHL*AHLTKN
Trigger: ATTCTTGGTCAGGTGTGCCCACAGATGCGGAGGCGA...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAGGGAGGGCTTCGGACTaGGTGCCGGGTGTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGGRASD*VPGVSL
Trigger: TAGAGAGACACCCGGCACCCAGTCCGAAGCCCTCCC...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGGCAGCTGGCGGTGGTaGAAATGGCGAACGGTAAGC +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLGSWRW*KWRTVS
Trigger: GCTTACCGTTCGCCATTTCCACCACCGCCAGCTGCC...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp GAACAAGGGACAAAAGTCAGCGGTATGCCCAGGAGTGTTCATTCCCACCAAATGCCTGGGTGTGGCACCTaGGCGGCGGCGGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: EQGTKVSGMPRSVHSHQMPGCGT*AAAVPA
Trigger: AGCAGGGACCGCCGCCGCCCAGGTGCCACACCCAGG...CATTTGGTGGGAATGAACACTCCTGGGCATACCGCTGACTTTTGTCCCTTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTGTACAGGTCCTCTGCAAGTaGGAGTCCAACTGTGACGCA +
Preference number: 4 (lower is better)
Translates to: PPPALVRAVDEGPRGDFVQVLCK*ESNCDA
Trigger: TGCGTCACAGTTGGACTCCCACTTGCAGAGGACCTG...TACAAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR CCA 90 bp GCCACGAAGCCCTGGCCCCACCCTGCGAGGTCACTTCCTACCCTACCAACAGCAAGCTGCAGTTATAGCTaGCATGGGGTGTGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: ATKPWPHPARSLPTLPTASCSYS*HGVWES
Trigger: ACTCTCCCACACCCCATGCCAGCTATAACTGCAGCT...TGCTGTTGGTAGGGTAGGAAGTGACCTCGCAGGGTGGGGCCAGGGCTTCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp CAGGCGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCTTGGACGGCACGGGCTATTTTCCTTGGAGGTaGGTTGGCTACTCTACTGTA +
Preference number: 4 (lower is better)
Translates to: QARLPDTGPRPGALDGTGYFPWR*VGYSTV
Trigger: TACAGTAGAGTAGCCAACCCACCTCCAAGGAAAATA...GCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGGCCTGCACTTGGATCTaGTCACCAGTGACATCGTCC +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWACTWI*SPVTSS
Trigger: GGACGATGTCACTGGTGACCAGATCCAAGTGCAGGC...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676773.1
3UTR CAA 72 bp CCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTaGCCTGACAGAGGAAGAGAGGCTAATCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PAGPDGNTGSSS*PDRGREANLES
Trigger: GCTCTCCAGATTAGCCTCTCTTCCTCTGTCAGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR CAA 72 bp CAAGAGTCACAGGGCGAAGAGCACTGCGGCCTGCACTaGGATCTGGTCACCAGTGACATCGTCCAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: QESQGEEHCGLH*DLVTSDIVQSS
Trigger: CGAGGACTGGACGATGTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGTGCTCTTCGCCCTGTGACTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR TCA 90 bp GGTGAAAGAGATCAAACGGAGATACGCAGAAGTTCAAGAAGTCCTCGCCTGGGTACCGCGGGGCATGCATaGTCTCCGAGGCGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GERDQTEIRRSSRSPRLGTAGHA*SPRRPA
Trigger: GGCTGGGCGCCTCGGAGATCATGCATGCCCCGCGGT...ACCCAGGCGAGGACTTCTTGAACTTCTGCGTATCTCCGTTTGATCTCTTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359446.10
CDS-3UTR TCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWSRTLG*VPSAVQ
Trigger: CTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGA...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AAGGACGGCGCTGTGAACCTGTCCCTGGACCGCGGGGCATGCATGATCTTGCCATCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: KDGAVNLSLDRGACMILPSRTLG*VPSAVQ
Trigger: CTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGA...TGGCAAGATCATGCATGCCCCGCGGTCCAGGGACAGGTTCACAGCGCCGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR TCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAATCTGCATTGTTCTGCTaGAACTGCAGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAESALFC*NCSLLP
Trigger: GGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGA...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGTCTGCATTGTTCTGCTaGAACTGCAGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VGTPDQESTASPCQQGPMSALFC*NCSLLP
Trigger: GGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGA...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTTGCACTGCTGGAGGATaGGGGCAGCACTGCATGATA +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLCTAGG*GQHCMI
Trigger: TATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCA...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTGCACTGCTGGAGGATaGGGGCAGCACTGCATGATA +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLCTAGG*GQHCMI
Trigger: TATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCA...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGCAGCCCTGCAGAACTaGACTAAGCTGTCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAAALQN*TKLSRK
Trigger: TTTCCTCGACAGCTTAGTTCAGTTCTGCAGGGCTGC...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTGCAGCCCTGCAGAACTaGACTAAGCTGTCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPAALQN*TKLSRK
Trigger: TTTCCTCGACAGCTTAGTTCAGTTCTGCAGGGCTGC...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCACCCTCCACTGTTCTCTaGCTGTCCAGTTCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPPSTVL*LSSSCL
Trigger: AAGGCAAGAACTGGACAGTCAGAGAACAGTGGAGGG...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCGCTCATCTTGTTATGTaGAGAGGCCACAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: NPLQVPASRARWEHGLLIAHLVM*RGHRGP
Trigger: TGGGCCTCTGTGGCCTCTTCACATAACAAGATGAGC...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTAGCATGTTCGTGGCATaGAGGCTTGGCTCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFSMFVA*RLGSKH
Trigger: GTGCTTGGAGCCAAGCCTTCATGCCACGAACATGCT...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTACTGCTGCAGGTGCTTaGACTGATGCCCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSTAAGA*TDARVA
Trigger: AGCAACTCGGGCATCAGTGCAAGCACCTGCAGCAGT...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGCTGAAACTGCAGTCTaGTGCCCCTGTGTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVAETAV*CPCVRC
Trigger: GCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGC...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGCTGAAACTGCAGTCTaGTGCCCCTGTGTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLAETAV*CPCVRC
Trigger: GCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGC...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTGTGCTTTTTACCCGGTaGTCTTCAGTCACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPVLFTR*SSVTCP
Trigger: GGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCAC...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTCCCCAAGCCAATCTCTaGCCTGAGAGCTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVPQANL*PESWCL
Trigger: GAGACACCAGCTCTCAGGGCAGAGATTGGCTTGGGG...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTCGGGCTCCTCATCTTTaGCTGACAGAGGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSRAPHL*LTEEER
Trigger: CCTCTCTTCCTCTGTCAGGCAAAGATGAGGAGCCCG...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCGGGCTCCTCATCTTTaGCTGACAGAGGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSRAPHL*LTEEER
Trigger: CCTCTCTTCCTCTGTCAGGCAAAGATGAGGAGCCCG...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCAGATGGGATTCAAGATaGCTTGGGTCTCCTACACCG +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSRWDSR*LGSPTP
Trigger: CGGTGTAGGAGACCCAAGGCATCTTGAATCCCATCT...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAAGCCGCAGCTCTCTGTaGTCCGCCTCTGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAESRSSL*SASETF
Trigger: AAAAGTTTCAGAGGCGGAGCACAGAGAGCTGCGGCT...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAACAAGGGACAAAAGTCAGCGGTATGCCCAGGAGTGTTCATTCCCACCAAATGCCCTGGCCACGCCGCTaGCAGCATCCTGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: EQGTKVSGMPRSVHSHQMPWPRR*QHPAGS
Trigger: CGACCCTGCAGGATGCTGGCAGCGGCGTGGCCAGGG...CATTTGGTGGGAATGAACACTCCTGGGCATACCGCTGACTTTTGTCCCTTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCGCGTGGAGACTTTGTAGTGGTTCAGCAGGCAGACGATGACCACCACCATCACCCCCGGACAAGCCTGTaGTCCAACTCTTGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: PRGDFVVVQQADDDHHHHPRTSL*SNSCAV
Trigger: GACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGG...GTGATGGTGGTGGTCATCGTCTGCCTGCTGAACCACTACAAAGTCTCCACGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR GCA 90 bp CACCACGACGATGATGATGATTTGGGCGAACTCCAGCTCCGTAACAGCGATGGAATGCCCGGAGGCGGGTaGTCGGTCACCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: HHDDDDDLGELQLRNSDGMPGGG*SVTRRQ
Trigger: CTGTCTCCTGGTGACCGAGCACCCGCCTCCGGGCAT...TCCATCGCTGTTACGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR GCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGAGCCTCCTTCAGTGTaGTGTTGTTCAGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAEEPPSV*CCSGGH
Trigger: GTGACCACCTGAACAACAGCACACTGAAGGAGGCTC...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR GCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTGCTGTCCTCTTCTGGTaGTCCCTCTCCACATCCTCT +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLAVLFW*SLSTSS
Trigger: AGAGGATGTGGAGAGGGAGCACCAGAAGAGGACAGC...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR GCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCTCCGCTCCCAGAGCGTaGTCGCCCGGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSSAPRA*SPGWEH
Trigger: GTGCTCCCAGCCGGGCGAGCACGCTCTGGGAGCGGA...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR GCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTGGTGCTAGACTCAAATaGTGTGGCTCCGACCGCAGA +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLGARLK*CGSDRR
Trigger: TCTGCGGTCGGAGCCACAGCATTTGAGTCTAGCACC...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR GCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGACAGGGCGAAGAGCACTaGGGCCTGCACTTGGATCTG +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGQGEEH*GLHLDL
Trigger: CAGATCCAAGTGCAGGCCGCAGTGCTCTTCGCCCTG...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR GCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTATGGCAAGGGGCTTTTaGTCCTTCCCTCTCACGCTC +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSMARGF*SFPLTL
Trigger: GAGCGTGAGAGGGAAGGAGCAAAAGCCCCTTGCCAT...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS-3UTR GCA 90 bp CAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTACATTCATTAAGCCCTaGCATGCCAGAAAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: QPVLPPPALVRAVDEGPRTFIKP*HARKLK
Trigger: CTTCAACTTTCTGGCATGGCAGGGCTTAATGAATGT...ACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678459.1
CDS-3UTR CCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTCGGACAGGGAGATGGTaGGAGGAAGATCAATCTCGT +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPRTGRW*EEDQSR
Trigger: ACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCG...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAACGGACAGGGAGATGGTaGGAGGAAGATCAATCTCGT +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAERTGRW*EEDQSR
Trigger: ACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCG...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCCGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 4 (lower is better)
Translates to: NPLQVPASRARWEHGLLIRRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCAAATATGGTTCGGTTaGGTGGGGCCCTCACGGACT +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLQIWFG*VGPSRT
Trigger: AGTCCGTGAGGGCCCCACCCAACCGAACCATATTTG...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCAATCACTGTCAAATATaGTTCGGTTGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSNHCQI*FGWVGP
Trigger: GGGCCCCACCCAACCGAACCATATTTGACAGTGATT...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCTGCCCGAGTTGCTGCTaGGTGGGCATGGACCCCCGC +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSCPSCC*VGMDPR
Trigger: GCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCA...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGAGGCGCCTGGGTGGTaGCCCATCACCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAAEAPGW*PITSLY
Trigger: ATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTC...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTAAGTTCTGTGTAGGCTaGATGTGGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSKFCVG*MWGGCW
Trigger: CCAGCAGCCACCCCACATCCAGCCTACACAGAACTT...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCGCCTCCGCATCTGTaGGCACACCTGACCAAGAAT +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLSPPHL*AHLTKN
Trigger: ATTCTTGGTCAGGTGTGCCCACAGATGCGGAGGCGA...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCAGAAGAGCCGCTGGATaGAAGATAGAGGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCRRAAG*KIEDGP
Trigger: GGGGCCATCCTCTATCTTCCATCCAGCGGCTCTTCT...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCCCAGTCATGGCTGCATaGGGGGCCGGGCTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSPVMAA*GAGLPA
Trigger: CGCAGGGAGCCCGGCCCCCCATGCAGCCATGACTGG...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAACGTGGCATGAAGGCTTaGCTCCAAGCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAERGMKA*LQALAL
Trigger: TAAAGCCAGTGCTTGGAGCCAAGCCTTCATGCCACG...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGTCCTTCACTTGGCTaGCTGACAGCCAAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: VGTPDQESTASPCQQGPMGPSLG*LTAKSL
Trigger: AAGAGACTTGGCTGTCAGCCAGCCAAGTGAAGGACC...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCGAACACGGGCGCCCCTaGCCACGCCGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPEHGRP*PRRCQH
Trigger: ATGCTGGCAGCGGCGTGGCCAGGGGCGCCCGTGTTC...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTTGCTGGGCCGGCCTCTaGGAGCATCCGCGGCCCACC +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCCWAGL*EHPRPT
Trigger: GGTGGGCCGCGGATGCTCCCAGAGGCCGGCCCAGCA...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCATGCTGGGCCGGCCTCTaGGAGCATCCGCGGCCCACC +
Preference number: 4 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPCWAGL*EHPRPT
Trigger: GGTGGGCCGCGGATGCTCCCAGAGGCCGGCCCAGCA...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCAGTCCATCGCTCTGCTaGGCCGGCCTCTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAASPSLC*AGLWEH
Trigger: ATGCTCCCAGAGGCCGGCCCAGCAGAGCGATGGACT...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTGCCACAGTCGTTCTGTTaGTTACAGACCAGCGAACCA +
Preference number: 4 (lower is better)
Translates to: SRLRLWFGRLMKDRVETLPQSFC*LQTSEP
Trigger: TGGTTCGCTGGTCTGTAACCAACAGAACGACTGTGG...CAAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCAGGTCCTCTGCAAGTaGGAGTCCAACTGTGACGCA +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVQVLCK*ESNCDA
Trigger: TGCGTCACAGTTGGACTCCCACTTGCAGAGGACCTG...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR CCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTGTTTGGCCTCACACCTaGACGTGTCACACACACAGG +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGVWPHT*TCHTHR
Trigger: CCTGTGTGTGTGACACGTCCAGGTGTGAGGCCAAAC...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR CCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTATGGAGAACAGAACATaGCTGCCCTGCCTGGATCCC +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLMENRT*LPCLDP
Trigger: GGGATCCAGGCAGGGCAGCCATGTTCTGTTCTCCAT...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS-3UTR CCA 90 bp ACGACGATGATGATGATTTGGGCGAACTCCAGCTCCGTAACAGCGATGGAGCCGCGCCATCGTTTCCGGTaGGCAGCACCCCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TTMMMIWANSSSVTAMEPRHRFR*AAPLLA
Trigger: AGCCAAGAGGGGTGCTGCCCACCGGAAACGATGGCG...CGGCTCCATCGCTGTTACGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR TCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTACCGCGGGGCATGCATaGTCTCCGAGGCGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCTAGHA*SPRRPA
Trigger: GGCTGGGCGCCTCGGAGATCATGCATGCCCCGCGGT...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCAACCGCGGGGCATGCATaGTCTCCGAGGCGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPTAGHA*SPRRPA
Trigger: GGCTGGGCGCCTCGGAGATCATGCATGCCCCGCGGT...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSSRTLG*VPSAVQ
Trigger: CTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGA...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCSRTLG*VPSAVQ
Trigger: CTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGA...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CACCATCACCGTGACCACCACGACGATGATGATGATTTGGGCGAACTCCAGCTCTGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HHHRDHHDDDDDLGELQLCRCLH*CPSCCW
Trigger: CCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCA...GAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR TCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTTCTGCATTGTTCTGCTaGAACTGCAGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLSALFC*NCSLLP
Trigger: GGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGA...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGTCTGCATTGTTCTGCTaGAACTGCAGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVSALFC*NCSLLP
Trigger: GGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGA...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTGCATTGTTCTGCTaGAACTGCAGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLSALFC*NCSLLP
Trigger: GGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGA...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AGTCACAGGGCGAAGAGCACTGCGGCCTGCACTTGGATCTGGTCACCAGTGACATGCACTGCTGGAGGATaGGGGCAGCACTGCATGATA +
Preference number: 4 (lower is better)
Translates to: SHRAKSTAACTWIWSPVTCTAGG*GQHCMI
Trigger: TATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCA...TGTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGTGCTCTTCGCCCTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR TCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTTGCACTGCTGGAGGATaGGGGCAGCACTGCATGATA +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVCTAGG*GQHCMI
Trigger: TATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCA...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGGCAGCCCTGCAGAACTaGACTAAGCTGTCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVAALQN*TKLSRK
Trigger: TTTCCTCGACAGCTTAGTTCAGTTCTGCAGGGCTGC...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCCCTCCACTGTTCTCTaGCTGTCCAGTTCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASPSTVL*LSSSCL
Trigger: AAGGCAAGAACTGGACAGTCAGAGAACAGTGGAGGG...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGGCTCATCTTGTTATGTaGAGAGGCCACAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVAHLVM*RGHRGP
Trigger: TGGGCCTCTGTGGCCTCTTCACATAACAAGATGAGC...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCGCCCAACAGGAGGTTTaGTGTCACGAACGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASAQQEV*CHERRA
Trigger: AGCTCTACGTTCGTGACATCAAACCTCCTGTTGGGC...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTAAAGCATTTGTGGCCTaGAAACCAGCTTCCGGCATA +
Preference number: 4 (lower is better)
Translates to: LPPPALVRAVDEGPRGDFKAFVA*KPASGI
Trigger: TATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTT...AAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR TCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGATCCACATCCTCTAACTaGTGGGAGCAGCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGSTSSN*WEQLPA
Trigger: CGCTGGGAGCTGCTCCCATCAGTTAGAGGATGTGGA...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR TCA 90 bp CAGGCGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCTTGGACGGCACGGGCTACCTAAATATGTTCTaGTCAAAGATGACTGACAGG +
Preference number: 4 (lower is better)
Translates to: QARLPDTGPRPGALDGTGYLNMF*SKMTDR
Trigger: CCTGTCAGTCATCTTTGATCAGAACATATTTAGGTA...GCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp TATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTTCCTCTCTTTCCCCCTTCCTGTGCAGCTCTaGACCCTGTTGCAGCACTTA +
Preference number: 4 (lower is better)
Translates to: YHGSGGKVWAPHAFLSFPLPVQL*TLLQHL
Trigger: TAAGTGCTGCAACAGGGTTCAGAGCTGCACAGGAAG...GGGGAAAGAGAGGAACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp GGAGACTTTGTAGTGGTTCAGCAGGCAGACGATGACCACCACCATCACCGTGACACAGCGATGGAGCCGTaGACAGAGCACTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GDFVVVQQADDDHHHHRDTAMEP*TEHSLE
Trigger: CTCCAGGGAGTGCTCTGTTCACGGCTCCATCGCTGT...GTCACGGTGATGGTGGTGGTCATCGTCTGCCTGCTGAACCACTACAAAGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR GCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGACGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGRLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTACTGCTGCAGGTGCTTaGACTGATGCCCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAATAAGA*TDARVA
Trigger: AGCAACTCGGGCATCAGTGCAAGCACCTGCAGCAGT...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTACTGCTGCAGGTGCTTaGACTGATGCCCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVTAAGA*TDARVA
Trigger: AGCAACTCGGGCATCAGTGCAAGCACCTGCAGCAGT...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGTGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRCPCVR*CAGDGG
Trigger: TCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGATCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGSAAPV*VAALVM
Trigger: CATCACCAGCGCAGCAACGCACACAGGGGCAGCAGA...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGTCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRSAAPV*VAALVM
Trigger: CATCACCAGCGCAGCAACGCACACAGGGGCAGCAGA...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCACTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPLKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTGCTCTTCAGTCACTTaGCCCCTCCACTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCCSSVT*PLHCSL
Trigger: CAGAGAACAGTGGAGGGGGCAAGTGACTGAAGAGCA...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTCAAAAGTCAGCGGTATaGCCAGGAGTGTTCATTCCC +
Preference number: 4 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPQKSAV*PGVFIP
Trigger: GGGAATGAACACTCCTGGGCATACCGCTGACTTTTG...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGAGATGGGATTCAAGATaGCTTGGGTCTCCTACACCG +
Preference number: 4 (lower is better)
Translates to: VGTPDQESTASPCQQGPMRWDSR*LGSPTP
Trigger: CGGTGTAGGAGACCCAAGGCATCTTGAATCCCATCT...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAAGATGGGATTCAAGATaGCTTGGGTCTCCTACACCG +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAERWDSR*LGSPTP
Trigger: CGGTGTAGGAGACCCAAGGCATCTTGAATCCCATCT...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGTCAATAAACAAGCAGTaGAGCAAGCCCCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: VGTPDQESTASPCQQGPMSINKQ*SKPPRW
Trigger: CCATCTCGGGGGCTTGCTGCACTGCTTGTTTATTGA...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCGCAAAGGACACAGCGTaGCGGGTAATAAAGAATGCT +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSAKDTA*RVIKNA
Trigger: AGCATTCTTTATTACCCGGCACGCTGTGTCCTTTGC...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCAGCCGCAGCTCTCTGTaGTCCGCCTCTGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASSRSSL*SASETF
Trigger: AAAAGTTTCAGAGGCGGAGCACAGAGAGCTGCGGCT...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCGCACCTGCACGCGGGTaGTCCTTGTCCCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPAPARG*SLSQPQ
Trigger: CTGCGGCTGGGACAAGGAGCACCCGCGTGCAGGTGC...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCCCGCTGCCAGCATCCTaGAGGGTCGCACCTGCACGC +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSPLPAS*RVAPAR
Trigger: GCGTGCAGGTGCGACCCTGCAGGATGCTGGCAGCGG...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACAGCTTCCGGCATACTaGTCCCCGGACAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEQLPAY*SPDKPV
Trigger: CACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCTG...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTCAGGCAGCTCAGAGCTaGAGTTATAGCTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAAQAAQS*SYSWHG
Trigger: CCCATGCCAGCTATAACTGCAGCTCTGAGCTGCCTG...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR GCA 90 bp GTGAGCCCTGGGTCAACGCCTTGTTCATCCACAGTGTCTCAGCAGGTAGTGTGTGGTCTGGGCCCCTCATaGGTTCCTCTCTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VSPGSTPCSSTVSQQVVCGLGPS*VPLFPQ
Trigger: CTGGGGAAAGAGAGGAACGCATGAGGGGCCCAGACC...ACACACTACCTGCTGAGACACTGTGGATGAACAAGGCGTTGACCCAGGGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYSRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGSRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCCGGACAGGGAGATGGTaGGAGGAAGATCAATCTCGT +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCRTGRW*EEDQSR
Trigger: ACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCG...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTCGGACAGGGAGATGGTaGGAGGAAGATCAATCTCGT +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLRTGRW*EEDQSR
Trigger: ACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCG...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTCGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLRRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLRRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASRRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGATATGGTTCGGTTGGGTaGGGCCCTCACGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGYGSVG*GPHGLS
Trigger: CGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATA...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAATATGGTTCGGTTGGGTaGGGCCCTCACGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEYGSVG*GPHGLS
Trigger: CGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATA...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTCAAATATGGTTCGGTTaGGTGGGGCCCTCACGGACT +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVQIWFG*VGPSRT
Trigger: AGTCCGTGAGGGCCCCACCCAACCGAACCATATTTG...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTCAAATATGGTTCGGTTaGGTGGGGCCCTCACGGACT +
Preference number: 4 (lower is better)
Translates to: PTLHMAECTADKPFSTRSQIWFG*VGPSRT
Trigger: AGTCCGTGAGGGCCCCACCCAACCGAACCATATTTG...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCAATCACTGTCAAATATaGTTCGGTTGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: NPLQVPASRARWEHGLLINHCQI*FGWVGP
Trigger: GGGCCCCACCCAACCGAACCATATTTGACAGTGATT...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 4 (lower is better)
Translates to: GSPSSRLRLWFGRLMKDRTSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...GCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR CCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTAAGAAATTGCACTGCTaGAGGATGAGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPKKLHC*RMRAAL
Trigger: CAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTT...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTTCGCTTCTGCTCTCTTaGGATTTCTTGTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPASLLLS*DFLWLG
Trigger: CCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGA...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp ACCAACGCCATGAGCCGGTCCTTTGAGGGAGGGCTTCGGACTGGGTGCCGGGTGGGACATGAATGGGAATaGATGAGAGGTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: TNAMSRSFEGGLRTGCRVGHEWE*MRGPSL
Trigger: AAGTGAAGGACCTCTCATCCATTCCCATTCATGTCC...CACCCGGCACCCAGTCCGAAGCCCTCCCTCAAAGGACCGGCTCATGGCGTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTGGGAGTTCTCGGAAATaGCCCAACAGGAGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPGSSRK*PNRRFD
Trigger: ATCAAACCTCCTGTTGGGCCATTTCCGAGAACTCCC...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTCGCGGGTGGAGGGGCTaGCCCTCAGGCCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCRGWRG*PSGPQN
Trigger: GTTCTGAGGGCCTGAGGGCCAGCCCCTCCACCCGCG...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACTGCTGGGCCGGCCTCTaGGAGCATCCGCGGCCCACC +
Preference number: 4 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHCWAGL*EHPRPT
Trigger: GGTGGGCCGCGGATGCTCCCAGAGGCCGGCCCAGCA...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCACCACAGTCGTTCTGTTaGTTACAGACCAGCGAACCA +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPPQSFC*LQTSEP
Trigger: TGGTTCGCTGGTCTGTAACCAACAGAACGACTGTGG...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTCCACAGTCGTTCTGTTaGTTACAGACCAGCGAACCA +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAPQSFC*LQTSEP
Trigger: TGGTTCGCTGGTCTGTAACCAACAGAACGACTGTGG...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGCAGGTCCTCTGCAAGTaGGAGTCCAACTGTGACGCA +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLQVLCK*ESNCDA
Trigger: TGCGTCACAGTTGGACTCCCACTTGCAGAGGACCTG...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR CCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCGTGCTGTTGTTCAGGTaGTCACTGGACATAATCAGG +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSVLLFR*SLDIIR
Trigger: CCTGATTATGTCCAGTGACCACCTGAACAACAGCAC...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR CCA 90 bp TGCCCCTGTGTGCGTTGCTGCGCTGGTGATGGAGGAAAGAGGCGCCTGGGTGGTGTGCTGTTGTTCAGGTaGTCACTGGACATAATCAGG +
Preference number: 4 (lower is better)
Translates to: CPCVRCCAGDGGKRRLGGVLLFR*SLDIIR
Trigger: CCTGATTATGTCCAGTGACCACCTGAACAACAGCAC...ACCACCCAGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAACGATGATGATGATTTaGGCGAACTCCAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAETMMMI*ANSSSA
Trigger: TGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGT...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585931.5
ENST00000677744.1
ENST00000678556.1
CDS-3UTR CCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTAGCTGCAGTTATAGCTaGCATGGGGTGTGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLSCSYS*HGVWES
Trigger: ACTCTCCCACACCCCATGCCAGCTATAACTGCAGCT...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR CCA 90 bp GCCCTCAAAGACCCTATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTCCTATGATCTGTAGGTaGAGAGATGAACGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALKDPIMGQGARSGPLMRPMICR*RDERGG
Trigger: CCCTCCACGTTCATCTCTCCACCTACAGATCATAGG...ACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATAGGGTCTTTGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp TATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTTCCTCTCTTTCCCCCAGGTAGTGTGTGCCTaGCACAAAGTTGGCATTCCC +
Preference number: 4 (lower is better)
Translates to: YHGSGGKVWAPHAFLSFPQVVCA*HKVGIP
Trigger: GGGAATGCCAACTTTGTGCCAGGCACACACTACCTG...GGGGAAAGAGAGGAACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTGAAAGCTTGGGCTCCTaGGAGTTTCTGTGCGTGCTA +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSESLGS*EFLCVL
Trigger: TAGCACGCACAGAAACTCCCAGGAGCCCAAGCTTTC...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR TCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCGCGTTGCTGCGCTGGTaGTGGAGGAAAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSALLRW*WRKEAP
Trigger: AGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGC...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CTCCTGGGAGTTTCTGTGCGTGCTACGTGTGCATTTTCCCCTTGGAAACAGAACGCGTTGCTGCGCTGGTaGTGGAGGAAAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LLGVSVRATCAFSPWKQNALLRW*WRKEAP
Trigger: AGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGC...GTTCTGTTTCCAAGGGGAAAATGCACACGTAGCACGCACAGAAACTCCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR TCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCGTTGCTGCGCTGGTaGTGGAGGAAAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPAALLRW*WRKEAP
Trigger: AGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGC...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 4 (lower is better)
Translates to: QPVLPPPALVRAVDEGPRITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...ACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR TCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGTTGTAAGCATGAGCTaGCAACTGGTGCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAVVSMS*QLVPVF
Trigger: AAACACAGGCACCAGTTGTCAGCTCATGCTTACAAC...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTTGTAAGCATGAGCTaGCAACTGGTGCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAEVVSMS*QLVPVF
Trigger: AAACACAGGCACCAGTTGTCAGCTCATGCTTACAAC...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGTCACTGGAACAAGACTaGATCCAGTCTCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: VGTPDQESTASPCQQGPMSLEQD*IQSQNL
Trigger: GAGGTTCTGAGACTGGATTCAGTCTTGTTCCAGTGA...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTCTTTTCACTGTTGCCTaGCACCTTCGTGATGCTACA +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPLFTVA*HLRDAT
Trigger: TGTAGCATCACGAAGGTGTCAGGCAACAGTGAAAAG...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTAACAGGTCTTTGAACTaGGCCTCCTTCAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSNRSLN*ASFSVL
Trigger: CAGCACACTGAAGGAGGCTCAGTTCAAAGACCTGTT...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR TCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGTCCACATCCTCTAACTaGTGGGAGCAGCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRSTSSN*WEQLPA
Trigger: CGCTGGGAGCTGCTCCCATCAGTTAGAGGATGTGGA...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR TCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGAGCAACGTCTATCAGTaGGCAGTCTGCACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVSNVYQ*AVCTSQ
Trigger: CTGAGAAGTGCAGACTGCTCACTGATAGACGTTGCT...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR TCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGCCCATCCCAACTGAGTaGGCATGCTCTGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRPIPTE*ACSVGI
Trigger: GATGCCCACAGAGCATGCTCACTCAGTTGGGATGGG...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679091.1
CDS-3UTR GCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTCCCGGAGCTGCAGGGTaGAGGGCCCCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCPGAAG*RAPGKE
Trigger: CTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGG...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAARLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACTGCTGCAGGTGCTTaGACTGATGCCCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGTAAGA*TDARVA
Trigger: AGCAACTCGGGCATCAGTGCAAGCACCTGCAGCAGT...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATTGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYCPCVR*CAGDGG
Trigger: TCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATTCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYSAAPV*VAALVM
Trigger: CATCACCAGCGCAGCAACGCACACAGGGGCAGCAGA...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCTCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGSAAPV*VAALVM
Trigger: CATCACCAGCGCAGCAACGCACACAGGGGCAGCAGA...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEETAVC*PCVRCC
Trigger: GCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTC...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGETAVC*PCVRCC
Trigger: GCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTC...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTTTCTCCAGCTGAAGTaGACGTTGGAAGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSFLQLK*TLEGIR
Trigger: TCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAA...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGLKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVLKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLLKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASLKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGCTAGAGCTGTGGGGTaGATCTCCTGCTTCACCAAA +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLARAVG*ISCFTK
Trigger: TTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGC...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAATGAATCCCAAGGGGTaGACCCTACAGTATACGATG +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPMNPKG*TLQYTM
Trigger: CATCGTATACTGTAGGGTGCACCCCTTGGGATTCAT...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCTGTGCTCCAACTCTTaGGCTGTCCCGTCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAALCSNS*AVPSRK
Trigger: CTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAG...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CACCATCACCGTGACCACCACGACGATGATGATGATTTGGGCGAACTCCAGCTCCTGTGCTCCAACTCTTaGGCTGTCCCGTCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: HHHRDHHDDDDDLGELQLLCSNS*AVPSRK
Trigger: CTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAG...GAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR GCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCGGGCCGGGCTGGGTaGTTGTCGCTTCCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGPGRAG*LSLPVY
Trigger: ATAAACAGGAAGCGACAAGCACCCAGCCCGGCCCGG...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399848.7
ENST00000677055.1
CDS-3UTR GCA 90 bp TCCACGCAGAACATTGCAATGTCACAGAAATGGCCGCCCACTGGCCACGAAGCCGGTGCTAGACTCAAATaGTGTGGCTCCGACCGCAGA +
Preference number: 4 (lower is better)
Translates to: STQNIAMSQKWPPTGHEAGARLK*CGSDRR
Trigger: TCTGCGGTCGGAGCCACAGCATTTGAGTCTAGCACC...GGCTTCGTGGCCAGTGGGCGGCCATTTCTGTGACATTGCAATGTTCTGCGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGATGATGATGATTTaGGCGAACTCCAGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCTMMMI*ANSSSA
Trigger: AGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGT...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677910.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPASRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSSRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGCTGAAGCGATCCCTCTaGATGAAGGACGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRLKRSL*MKDGAV
Trigger: CACAGCGCCGTCCTTCATCCAGAGGGATCGCTTCAG...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCTGAAGCGATCCCTCTaGATGAAGGACGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAALKRSL*MKDGAV
Trigger: CACAGCGCCGTCCTTCATCCAGAGGGATCGCTTCAG...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTCGGACAGGGAGATGGTaGGAGGAAGATCAATCTCGT +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVRTGRW*EEDQSR
Trigger: ACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCG...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCCCTGGTAAGGAGGTaGCTCTTCACCGTCGGACAG +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGPLVRR*LFTVGQ
Trigger: CTGTCCGACGGTGAAGAGCCACCTCCTTACCAGGGG...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTAATCACTGTCAAATATaGTTCGGTTGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSNHCQI*FGWVGP
Trigger: GGGCCCCACCCAACCGAACCATATTTGACAGTGATT...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTAATCACTGTCAAATATaGTTCGGTTGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGNHCQI*FGWVGP
Trigger: GGGCCCCACCCAACCGAACCATATTTGACAGTGATT...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGAGTTGCTGCTGGGTaGGCATGGACCCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGRVAAG*AWTPAI
Trigger: TATAGCGGGGGTCCATGCCCACCCAGCAGCAACTCG...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTTGCCCGAGTTGCTGCTaGGTGGGCATGGACCCCCGC +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCCPSCC*VGMDPR
Trigger: GCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCA...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAATCAGACCATGCCCGAGTTGCTGCTaGGTGGGCATGGACCCCCGC +
Preference number: 4 (lower is better)
Translates to: SLLGFFLQLKCTLEGIRPCPSCC*VGMDPR
Trigger: GCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCA...TGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CGGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 4 (lower is better)
Translates to: RQPVLPPPALVRAVDEGPPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...CGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR CCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCAAGAAATTGCACTGCTaGAGGATGAGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASKKLHC*RMRAAL
Trigger: CAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTT...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAAATCCTGCGGGAATTTaGGTAGGTTTTGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAENPAGI*VGFEHC
Trigger: GCAGTGCTCAAAACCTACCCAAATTCCCGCAGGATT...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCCAAGAAGTCCTCGCCTaGGTACAAAATTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: NPLQVPASRARWEHGLLIQEVLA*VQNSSA
Trigger: AGCAGAGGAATTTTGTACCCAGGCGAGGACTTCTTG...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTCGTGGCATGAAGGCTTaGCTCCAAGCACTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVRGMKA*LQALAL
Trigger: TAAAGCCAGTGCTTGGAGCCAAGCCTTCATGCCACG...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCGAACACGGGCGCCCCTaGCCACGCCGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTEHGRP*PRRCQH
Trigger: ATGCTGGCAGCGGCGTGGCCAGGGGCGCCCGTGTTC...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTAAAAATTCGCTTCTGCTCTCTTGGGATTTCTTGTGGCTTGGGTGTGTGTCCCCTGGGTGTGGCACCTaGGCGGCGGCGGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: FKNSLLLSWDFLWLGCVSPGCGT*AAAVPA
Trigger: AGCAGGGACCGCCGCCGCCCAGGTGCCACACCCAGG...GGACACACACCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCCCTGGGTGTGGCACCTaGGCGGCGGCGGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSPGCGT*AAAVPA
Trigger: AGCAGGGACCGCCGCCGCCCAGGTGCCACACCCAGG...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTACGATGATGATGATTTaGGCGAACTCCAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSTMMMI*ANSSSE
Trigger: CTCGGAGCTGGAGTTCGCCCAAATCATCATCATCGT...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CCA 90 bp ACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGAACAGAAGAAGCAAGGCCAGGTGCCTTaGACGGCACGGGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: TSPGNPKLHSGELQEQKKQGQVP*TARAGG
Trigger: CCCGCCTGCCCGTGCCGTCCAAGGCACCTGGCCTTG...CTTCTTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp GCCCTCAAAGACCCTATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTTGCCTGGCACAAAGTTaGCATTCCCCATTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: ALKDPIMGQGARSGPLMRCLAQS*HSPFRS
Trigger: GCTTCTAAATGGGGAATGCCAACTTTGTGCCAGGCA...ACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATAGGGTCTTTGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp CTCACGGACTCTCGGTTGAGTTCCATCTGCTGTTCAGGGTCCCGGAGCTGCAGGAGCAATGGAGAGCTGTaGGTAATGGAAAGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LTDSRLSSICCSGSRSCRSNGEL*VMESLG
Trigger: GCCCAAGCTTTCCATTACCCACAGCTCTCCATTGCT...CCTGCAGCTCCGGGACCCTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR CCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTAGGAGGGCTGAGCAATaGAGAGCTGTGGGTAATGGA +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAARRAEQ*RAVGNG
Trigger: TCCATTACCCACAGCTCTCCATTGCTCAGCCCTCCT...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR CCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCATGGCTGCCCTGCCTaGATCCCTTCAGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGHGCPA*IPSEPQ
Trigger: CTGAGGCTCTGAAGGGATCCAGGCAGGGCAGCCATG...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS-3UTR CCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCGAGTGTCCTCCCAGCTaGTGCTTCAGATTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASECPPS*CFRFCP
Trigger: TGGACAAAATCTGAAGCACCAGCTGGGAGGACACTC...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679091.1
3UTR CAA 72 bp GGGCTGAGCAATGGAGAGCTGTGGGTAATGGAAAGCTaGGGCTCCTGGGAGTTTCTGTGCGTGCTACGTGTG +
Preference number: 4 (lower is better)
Translates to: GLSNGELWVMES*GSWEFLCVLRV
Trigger: CACACGTAGCACGCACAGAAACTCCCAGGAGCCCAAGCTTTCCATTACCCACAGCTCTCCATTGCTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR TCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGACCGCGGGGCATGCATaGTCTCCGAGGCGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGTAGHA*SPRRPA
Trigger: GGCTGGGCGCCTCGGAGATCATGCATGCCCCGCGGT...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000587757.5
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGCGTTGCTGCGCTGGTaGTGGAGGAAAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSALLRW*WRKEAP
Trigger: AGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGC...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTCGATGCACTGCTATTTaGTGCAAACTCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPRCTAI*CKLLQQ
Trigger: TTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCG...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCACGATGCACTGCTATTTaGTGCAAACTCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPRCTAI*CKLLQQ
Trigger: TTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCG...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTCGATGCACTGCTATTTaGTGCAAACTCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPARCTAI*CKLLQQ
Trigger: TTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCG...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTGCTGAACTCAGAACATaGGGCACCTTAGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFAELRT*GTLVAE
Trigger: TTCAGCAACTAAGGTGCCTCATGTTCTGAGTTCAGC...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTAAAGCATTTGTGGCCTaGAAACCAGCTTCCGGCATA +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGKAFVA*KPASGI
Trigger: TATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTT...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGAAAGCATTTGTGGCCTaGAAACCAGCTTCCGGCATA +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVKAFVA*KPASGI
Trigger: TATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTT...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCACTCCAGCTCCGAGTTaGAGATGCCCGGAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSTPAPS*RCPEAG
Trigger: ACCCGCCTCCGGGCATCTTCAACTCGGAGCTGGAGT...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR TCA 90 bp AACAGCAGCACCCCACCTCACTCCCCTACGTGCTGGCCTTTCCTGGAGCACCAATTGGCTACTGCACAGTaGACTTGTCGCATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: NSSTPPHSPTCWPFLEHQLATAQ*TCRISF
Trigger: GAAGGAAATGCGACAAGTTCACTGTGCAGTAGCCAA...TTGGTGCTCCAGGAAAGGCCAGCACGTAGGGGAGTGAGGTGGGGTGCTGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp CTCCTGGGAGTTTCTGTGCGTGCTACGTGTGCATTTTCCCCTTGGAAACAGAACACCGCGGGGCATGCATaGTCTTGCCAAATCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LLGVSVRATCAFSPWKQNTAGHA*SCQIPA
Trigger: CGCTGGGATTTGGCAAGATCATGCATGCCCCGCGGT...GTTCTGTTTCCAAGGGGAAAATGCACACGTAGCACGCACAGAAACTCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR GCA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACCCCGGAGCTGCAGGGTaGAGGGCCCCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHPGAAG*RAPGKE
Trigger: CTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGG...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCTCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSSAAPV*VAALVM
Trigger: CATCACCAGCGCAGCAACGCACACAGGGGCAGCAGA...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGETAVC*PCVRCC
Trigger: GCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTC...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATGCTGAAACTGCAGTCTaGTGCCCCTGTGTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYAETAV*CPCVRC
Trigger: GCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGC...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTCCAGCTGAAGTaGACGTTGGAAGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWFLQLK*TLEGIR
Trigger: TCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAA...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAEASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGGCTAAACGTGTTGGCTaGTGCTCTTATAAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWAKRVG*CSYKSQ
Trigger: CTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGC...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGCTAAACGTGTTGGCTaGTGCTCTTATAAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAAKRVG*CSYKSQ
Trigger: CTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGC...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCTCCACTGCAAGTCCCTaGCAGCAGGGCCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPSTASP*QQGPMG
Trigger: TCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGA...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAGTGGGGTGCATCTCCTaGTTCACCAAAACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGVGCIS*FTKTAG
Trigger: ACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCAC...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGGAATTCACAAGTCTCTaGTCTGAGCCCCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVEFTSL*SEPLLE
Trigger: CTCAAGAAGGGGCTCAGAGCAGAGACTTGTGAATTC...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCGGGAGGGTGAGGACATaGTTGTCAAGCTTCTGTATT +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCGRVRT*LSSFCI
Trigger: AATACAGAAGCTTGACAAGCATGTCCTCACCCTCCC...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTGGGAGGGTGAGGACATaGTTGTCAAGCTTCTGTATT +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSGRVRT*LSSFCI
Trigger: AATACAGAAGCTTGACAAGCATGTCCTCACCCTCCC...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTAGGACATATTTGAAGTaGTCTGCACCAGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGRTYLK*SAPEPS
Trigger: GGAAGGCTCTGGTGCAGAGCACTTCAAATATGTCCT...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATAATTCAACACACGCCTaGTTCCTCCGGGGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYNSTHA*FLRGSE
Trigger: CTCCGAGCCCCGGAGGAAGCAGGCGTGTGTTGAATT...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399848.7
CDS-3UTR GCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGGTAAAACATCTCCCGTaGATTCGGATGCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRVKHLP*IRMPPG
Trigger: GCCTGGGGGCATCCGAATGCACGGGAGATGTTTTAC...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR GCA 90 bp GCCACGAAGCCCTGGCCCCACCCTGCGAGGTCACTTCCTACCCTACCAACAGCAGTTTTTGGCGTCACCTaGTGGCTTTATCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: ATKPWPHPARSLPTLPTAVFGVT*WLYLPL
Trigger: TAAAGGAAGATAAAGCCAGCAGGTGACGCCAAAAAC...TGCTGTTGGTAGGGTAGGAAGTGACCTCGCAGGGTGGGGCCAGGGCTTCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp GAGTCACAGGGCGAAGAGCACTGCGGCCTGCACTTGGATCTGGTCACCAGTGACTGTGCGTGCTACGTGTaGATTTTCCCCTTGGAAACA +
Preference number: 4 (lower is better)
Translates to: ESQGEEHCGLHLDLVTSDCACYV*IFPLET
Trigger: TGTTTCCAAGGGGAAAATGCACACGTAGCACGCACA...GTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGTGCTCTTCGCCCTGTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR GCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTGTCCTCCCAGCTGGTaGTTCAGATTTTGTCCATTC +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCCPPSW*FRFCPF
Trigger: GAATGGACAAAATCTGAAGCACCAGCTGGGAGGACA...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679091.1
CDS-3UTR CCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSSRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACAAATATGGTTCGGTTaGGTGGGGCCCTCACGGACT +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEQIWFG*VGPSRT
Trigger: AGTCCGTGAGGGCCCCACCCAACCGAACCATATTTG...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTAATCACTGTCAAATATaGTTCGGTTGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAANHCQI*FGWVGP
Trigger: GGGCCCCACCCAACCGAACCATATTTGACAGTGATT...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCGCTGCTGGGTGGGCATaGACCCCCGCTATACATAGC +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSAAGWA*TPAIHS
Trigger: GCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGC...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGATGCCCGAGTTGCTGCTaGGTGGGCATGGACCCCCGC +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGCPSCC*VGMDPR
Trigger: GCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCA...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GACCAGGTTCCCAGGCTTCCTATCTTTGCCTTTGATGGGTACTATTGTGCTCTCGAGGCGCCTGGGTGGTaGCCCATCACCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: DQVPRLPIFAFDGYYCALEAPGW*PITSLY
Trigger: ATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTC...GAGAGCACAATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGGGAACCTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGAGGAAAGAGGCGCCTaGGTGGTGGCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSEERGA*VVAHHL
Trigger: GAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTC...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAATTTCTTGGATGCTTCTaGGGACCACTCCAGGATATT +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAEFLGCF*GPLQDI
Trigger: AATATCCTGGAGTGGTCCCCAGAAGCATCCAAGAAA...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTTTTCTTGGATGCTTCTaGGGACCACTCCAGGATATT +
Preference number: 4 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPFLGCF*GPLQDI
Trigger: AATATCCTGGAGTGGTCCCCAGAAGCATCCAAGAAA...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTAAGAAATTGCACTGCTaGAGGATGAGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVKKLHC*RMRAAL
Trigger: CAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTT...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGAATCCTGCGGGAATTTaGGTAGGTTTTGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVNPAGI*VGFEHC
Trigger: GCAGTGCTCAAAACCTACCCAAATTCCCGCAGGATT...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTGGATCAGACAACTCTTaGGGTTTGGAACAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLGSDNS*GLEQSL
Trigger: GAGAGACTGTTCCAAACCCCAAGAGTTGTCTGATCC...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCGGATTTCTTGTGGCTTaGGTGTGTGTCCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: NPLQVPASRARWEHGLLIGFLVA*VCVHVF
Trigger: AAACACATGGACACACACCCAAGCCACAAGAAATCC...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679177.1
CDS-3UTR CCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTAGAGAAGGGAACTGTTaGTTCAGAGAGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVREGNC*FREEGR
Trigger: CCTGCCTTCCTCTCTGAACCAACAGTTCCCTTCTCT...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCTGGCAGCTGGCGGTaGTGGAAATGGCGAACGGTA +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPAAGSWR*WKWRTV
Trigger: TACCGTTCGCCATTTCCACCACCGCCAGCTGCCAGC...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTGGGAGTTCTCGGAAATaGCCCAACAGGAGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: PTLHMAECTADKPFSTRSGSSRK*PNRRFD
Trigger: ATCAAACCTCCTGTTGGGCCATTTCCGAGAACTCCC...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCGAACACGGGCGCCCCTaGCCACGCCGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSEHGRP*PRRCQH
Trigger: ATGCTGGCAGCGGCGTGGCCAGGGGCGCCCGTGTTC...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCGCAGTGTCTGCTAAACGTGTTGGCTGCTGCTCTTATAAAAGCCAGTGCTTACAGTCCATCGCTCTGCTaGGCCGGCCTCTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: AQCLLNVLAAALIKASAYSPSLC*AGLWEH
Trigger: ATGCTCCCAGAGGCCGGCCCAGCAGAGCGATGGACT...GTAAGCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACACTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTGTGCTGTTGTTCAGGTaGTCACTGGACATAATCAGG +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLVLLFR*SLDIIR
Trigger: CCTGATTATGTCCAGTGACCACCTGAACAACAGCAC...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR CCA 90 bp TCGGTTGGGTGGGGCCCTCACGGACTCTCGGTTGAGTTCCATCTGCTGTTCAGGGTGCTGTTGTTCAGGTaGTCACTGGACATAATCAGG +
Preference number: 4 (lower is better)
Translates to: SVGWGPHGLSVEFHLLFRVLLFR*SLDIIR
Trigger: CCTGATTATGTCCAGTGACCACCTGAACAACAGCAC...CCTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAGGGCCCCACCCAACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCCGGGCTGTCCTCTTCTaGTGCTCCCTCTCCACATCC +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSRAVLF*CSLSTS
Trigger: GGATGTGGAGAGGGAGCACCAGAAGAGGACAGCCCG...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585931.5
CDS-3UTR CCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGCGGGCTGTCCTCTTCTaGTGCTCCCTCTCCACATCC +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPARAVLF*CSLSTS
Trigger: GGATGTGGAGAGGGAGCACCAGAAGAGGACAGCCCG...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR CCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTGAGGGCGCTTTCTCCTaGTTCATTTTGTTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFEGAFS*FILFKH
Trigger: GTGCTTGAACAAAATGAACCAGGAGAAAGCGCCCTC...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR CCA 90 bp TCCACGCAGAACATTGCAATGTCACAGAAATGGCCGCCCACTGGCCACGAAGCCTTGGCTGGGCCTGCTTaGCTACTGCACAGTGAACTT +
Preference number: 4 (lower is better)
Translates to: STQNIAMSQKWPPTGHEALAGPA*LLHSEL
Trigger: AAGTTCACTGTGCAGTAGCCAAGCAGGCCCAGCCAA...GGCTTCGTGGCCAGTGGGCGGCCATTTCTGTGACATTGCAATGTTCTGCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp ACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGAACAGAAGAAGCTGGCCACGAAGCCCTaGCCCCACCCTGCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: TSPGNPKLHSGELQEQKKLATKP*PHPARS
Trigger: TGACCTCGCAGGGTGGGGCCAGGGCTTCGTGGCCAG...CTTCTTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp GATGATTTGGGCGAACTCCAGCTCCGTAACAGCGATGGAGCCGTGAACAGAGCAGAACAGAGCACTCCCTaGAGAGGCCCCCATTTAGCT +
Preference number: 4 (lower is better)
Translates to: DDLGELQLRNSDGAVNRAEQSTP*RGPHLA
Trigger: AGCTAAATGGGGGCCTCTCCAGGGAGTGCTCTGTTC...TGCTCTGTTCACGGCTCCATCGCTGTTACGGAGCTGGAGTTCGCCCAAATCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR CCA 90 bp CAGCGATGGAGCCGTGAACAGAGCACTCCCTGGAGAGGCCCCCATTTAGCTCTGACGATGATGATGATTTaGGCGAACTCCAGCTCCGTA +
Preference number: 4 (lower is better)
Translates to: QRWSREQSTPWRGPHLALTMMMI*ANSSSV
Trigger: TACGGAGCTGGAGTTCGCCCAAATCATCATCATCGT...CAGAGCTAAATGGGGGCCTCTCCAGGGAGTGCTCTGTTCACGGCTCCATCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR CCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTACTCCAGCTCCGCACTaGTTGAGTTTCCTTGTTCAA +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSTPAPH*LSFLVQ
Trigger: TTGAACAAGGAAACTCAACCAGTGCGGAGCTGGAGT...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR TCA 90 bp TTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGCTTCCAACGGTGCGGCGCTGTCTaGAGGCCACAGGCACCCTTC +
Preference number: 4 (lower is better)
Translates to: LPRSATWHSSVIISRGFQRCGAV*RPQAPF
Trigger: GAAGGGTGCCTGTGGCCTTCAGACAGCGCCGCACCG...TTGGAAGCCCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCTCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAASRTLG*VPSAVQ
Trigger: CTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGA...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTGCTGCTGGGTGGGCATGGACCCCCGCTATACATAGCAATGTCTATTAAATCAGCGTTGCTGCGCTGGTaGTGGAGGAAAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LLLGGHGPPLYIAMSIKSALLRW*WRKEAP
Trigger: AGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGC...TGATTTAATAGACATTGCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR TCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAATCTGCATTGTTCTGCTaGAACTGCAGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLESALFC*NCSLLP
Trigger: GGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGA...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTTCCTATCTTTGCCTTTaGTGGGTACTATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPASYLCL*WVLLCS
Trigger: AGAGCACAATAGTACCCATCAAAGGCAAAGATAGGA...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTCCTATCTTTGCCTTTaGTGGGTACTATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: NPLQVPASRARWEHGLLISYLCL*WVLLCS
Trigger: AGAGCACAATAGTACCCATCAAAGGCAAAGATAGGA...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCGATGCACTGCTATTTaGTGCAAACTCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFRCTAI*CKLLQQ
Trigger: TTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCG...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCGATGCACTGCTATTTaGTGCAAACTCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASRCTAI*CKLLQQ
Trigger: TTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCG...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCTGCACTGCTGGAGGATaGGGGCAGCACTGCATGATA +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGCTAGG*GQHCMI
Trigger: TATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCA...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCAATTTGGGTAGGTTTTaGGCACTGCATTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSNLGRF*ALHSFK
Trigger: CTTAAAGGAATGCAGTGCTCAAAACCTACCCAAATT...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCACAAACAAAAACCAGTaGCCTATCTACAGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSTNKNQ*PIYRGK
Trigger: CTTACCTCTGTAGATAGGTCACTGGTTTTTGTTTGT...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTTCACTGGAACAAGACTaGATCCAGTCTCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: PTLHMAECTADKPFSTRSSLEQD*IQSQNL
Trigger: GAGGTTCTGAGACTGGATTCAGTCTTGTTCCAGTGA...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCACTGCAGGTGAGAACTaGAATGATGGAATCACTCAC +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASTAGEN*NDGITH
Trigger: GTGAGTGATTCCATCATTTCAGTTCTCACCTGCAGT...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCACATGAGCCGGTCCTTTaGGGGAGGGCTTCGGACTGG +
Preference number: 4 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPHEPVL*GRASDW
Trigger: CCAGTCCGAAGCCCTCCCTCAAAGGACCGGCTCATG...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTCATGAGCCGGTCCTTTaGGGGAGGGCTTCGGACTGG +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCHEPVL*GRASDW
Trigger: CCAGTCCGAAGCCCTCCCTCAAAGGACCGGCTCATG...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTCTTTTCACTGTTGCCTaGCACCTTCGTGATGCTACA +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAALFTVA*HLRDAT
Trigger: TGTAGCATCACGAAGGTGTCAGGCAACAGTGAAAAG...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGAAGATGCCTCTGGAGCTaGACAAAGTCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGRCLWS*TKSSAA
Trigger: TGCAGCAGAAGACTTTGTTCAGCTCCAGAGGCATCT...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTTTTGGGTCCGTATTATaGTGGGACATGAATGGGAAT +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAFGSVL*WDMNGN
Trigger: ATTCCCATTCATGTCCCATCATAATACGGACCCAAA...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp AACAGCAGCACCCCACCTCACTCCCCTACGTGCTGGCCTTTCCTGGAGCACCAATTAAGAACAGGTCTTTaGACTGAGCCTCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: NSSTPPHSPTCWPFLEHQLRTGL*TEPPSV
Trigger: CACTGAAGGAGGCTCAGTTCAAAGACCTGTTCTTAA...TTGGTGCTCCAGGAAAGGCCAGCACGTAGGGGAGTGAGGTGGGGTGCTGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp GGCAGGAATCCAGAAAACGATCCACGCAGAACATTGCAATGTCACAGAAATGGCGGGACCCCAACGGCCTaGCCTGCTTCAACAGCATCC +
Preference number: 4 (lower is better)
Translates to: GRNPENDPRRTLQCHRNGGTPTA*PASTAS
Trigger: GGATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTCCC...GCCATTTCTGTGACATTGCAATGTTCTGCGTGGATCGTTTTCTGGATTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGACACGAACGTAGAGCTTaGACCGCTCGCGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGHERRA*TARALG
Trigger: GCCGAGCGCGCGAGCGGTTCAAGCTCTACGTTCGTG...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679167.1
CDS-3UTR GCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCCCCGGAGCTGCAGGGTaGAGGGCCCCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSPGAAG*RAPGKE
Trigger: CTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGG...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCGGAGCTGCAGGGTaGAGGGCCCCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGPGAAG*RAPGKE
Trigger: CTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGG...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCCGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSRLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCTGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPCPCVR*CAGDGG
Trigger: TCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCTCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPSAAPV*VAALVM
Trigger: CATCACCAGCGCAGCAACGCACACAGGGGCAGCAGA...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCGCAGTGTCTGCTAAACGTGTTGGCTGCTGCTCTTATAAAAGCCAGTGCTTACTCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: AQCLLNVLAAALIKASAYSAAPV*VAALVM
Trigger: CATCACCAGCGCAGCAACGCACACAGGGGCAGCAGA...GTAAGCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACACTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPAETAVC*PCVRCC
Trigger: GCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTC...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGGCTGAAACTGCAGTCTaGTGCCCCTGTGTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKAETAV*CPCVRC
Trigger: GCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGC...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTTTTCTCCAGCTGAAGTaGACGTTGGAAGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSFLQLK*TLEGIR
Trigger: TCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAA...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTTTTCTCCAGCTGAAGTaGACGTTGGAAGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLFLQLK*TLEGIR
Trigger: TCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAA...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTCACGGACTCTCGGTTGAGTTCCATCTGCTGTTCAGGGTCCCGGAGCTGCAGGTTTCTCCAGCTGAAGTaGACGTTGGAAGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: LTDSRLSSICCSGSRSCRFLQLK*TLEGIR
Trigger: TCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAA...CCTGCAGCTCCGGGACCCTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR GCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTTTCTCCAGCTGAAGTaGACGTTGGAAGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLFLQLK*TLEGIR
Trigger: TCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAA...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTCAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTCACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTGGTAGAATCCTaGGGGAATTTGGGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLGLVES*GNLGRF
Trigger: AAACCTACCCAAATTCCCGCAGGATTCTACCAAACC...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCTGAGAGCTGGTGTCTCTCCAGCAGAGGCCTTCCAACTGTCACTGGAACAAGATGCTCTTCAGTCACTTaGCCCCTCCACTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PESWCLSSRGLPTVTGTRCSSVT*PLHCSL
Trigger: CAGAGAACAGTGGAGGGGGCAAGTGACTGAAGAGCA...TCTTGTTCCAGTGACAGTTGGAAGGCCTCTGCTGGAGAGACACCAGCTCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTGCTAAACGTGTTGGCTaGTGCTCTTATAAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLAKRVG*CSYKSQ
Trigger: CTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGC...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGCCCCAAGCCAATCTCTaGCCTGAGAGCTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKPQANL*PESWCL
Trigger: GAGACACCAGCTCTCAGGGCAGAGATTGGCTTGGGG...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGCCCCAAGCCAATCTCTaGCCTGAGAGCTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPAPQANL*PESWCL
Trigger: GAGACACCAGCTCTCAGGGCAGAGATTGGCTTGGGG...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTGAATTCACAAGTCTCTaGTCTGAGCCCCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAAEFTSL*SEPLLE
Trigger: CTCAAGAAGGGGCTCAGAGCAGAGACTTGTGAATTC...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCGCAACAACAAAAATGTaGACTTTTCACTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSATTKM*TFHCCL
Trigger: CAGGCAACAGTGAAAAGTGCACATTTTTGTTGTTGC...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAGCCGCAGCTCTCTGTaGTCCGCCTCTGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRSRSSL*SASETF
Trigger: AAAAGTTTCAGAGGCGGAGCACAGAGAGCTGCGGCT...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCTGCAGGGTCGCACCTaGACGCGGGTGCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGLQGRT*TRVLLV
Trigger: GACAAGGAGCACCCGCGTGCAGGTGCGACCCTGCAG...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCACCCTGGCCACGCCGCTaGCAGCATCCTGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAPWPRR*QHPAGS
Trigger: CGACCCTGCAGGATGCTGGCAGCGGCGTGGCCAGGG...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACCCAAGTCCATCGCTCTaGTGGGCCGGCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHPSPSL*WAGLWE
Trigger: CTCCCAGAGGCCGGCCCAGCAGAGCGATGGACTTGG...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGCAGCTTCCGGCATACTaGTCCCCGGACAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQQLPAY*SPDKPV
Trigger: CACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCTG...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp AATTCCCCCTATAGGATTCATTTAAAATCCACCCTCACCTCCACCTCCACATTACGGCCCAAGGCCAGGTaGCTTGGACGGCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: NSPYRIHLKSTLTSTSTLRPKAR*LGRHGQ
Trigger: CTGCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCG...TAATGTGGAGGTGGAGGTGAGGGTGGATTTTAAATGAATCCTATAGGGGGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCAGAACATGGCTGCCCTaGCTGGATCCCTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSRTWLP*LDPFRA
Trigger: GGCTCTGAAGGGATCCAGGCAGGGCAGCCATGTTCT...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS-3UTR CCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCGGACAGGGAGATGGTaGGAGGAAGATCAATCTCGT +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAARTGRW*EEDQSR
Trigger: ACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCG...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGCGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRRRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGCCCCTGGTAAGGAGGTaGCTCTTCACCGTCGGACAG +
Preference number: 4 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQPLVRR*LFTVGQ
Trigger: CTGTCCGACGGTGAAGAGCCACCTCCTTACCAGGGG...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CTGCTGGGTGGGCATGGACCCCCGCTATACATAGCAATGTCTATTAAATCACTGCCCCTGGTAAGGAGGTaGCTCTTCACCGTCGGACAG +
Preference number: 4 (lower is better)
Translates to: LLGGHGPPLYIAMSIKSLPLVRR*LFTVGQ
Trigger: CTGTCCGACGGTGAAGAGCCACCTCCTTACCAGGGG...CAGTGATTTAATAGACATTGCTATGTATAGCGGGGGTCCATGCCCACCCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCTATGGTTCGGTTGGGTaGGGCCCTCACGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPYGSVG*GPHGLS
Trigger: CGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATA...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GAACAAGGGACAAAAGTCAGCGGTATGCCCAGGAGTGTTCATTCCCACCAAATGTATGGTTCGGTTGGGTaGGGCCCTCACGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: EQGTKVSGMPRSVHSHQMYGSVG*GPHGLS
Trigger: CGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATA...CATTTGGTGGGAATGAACACTCCTGGGCATACCGCTGACTTTTGTCCCTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGCTGCTGGGTGGGCATaGACCCCCGCTATACATAGC +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSAAGWA*TPAIHS
Trigger: GCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGC...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCCGAGTTGCTGCTGGGTaGGCATGGACCCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSRVAAG*AWTPAI
Trigger: TATAGCGGGGGTCCATGCCCACCCAGCAGCAACTCG...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCTGCCCGAGTTGCTGCTaGGTGGGCATGGACCCCCGC +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSCPSCC*VGMDPR
Trigger: GCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCA...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTGAGGCGCCTGGGTGGTaGCCCATCACCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCEAPGW*PITSLY
Trigger: ATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTC...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CATTTTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCGAGGAAAGAGGCGCCTaGGTGGTGGCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: HFNCMLCFLPGALQSLAPEERGA*VVAHHL
Trigger: GAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTC...GGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTTTCTTGGATGCTTCTaGGGACCACTCCAGGATATT +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSFLGCF*GPLQDI
Trigger: AATATCCTGGAGTGGTCCCCAGAAGCATCCAAGAAA...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTTTTCTTGGATGCTTCTaGGGACCACTCCAGGATATT +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLFLGCF*GPLQDI
Trigger: AATATCCTGGAGTGGTCCCCAGAAGCATCCAAGAAA...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAAGAAATTGCACTGCTaGAGGATGAGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGKKLHC*RMRAAL
Trigger: CAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTT...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGAGCTAGAGCTGTGGGGTGCATCTCCTGCTTCACCAAAACTGCAGGTGAGAACAAGTTCTGTGTAGGCTaGATGTGGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RARAVGCISCFTKTAGENKFCVG*MWGGCW
Trigger: CCAGCAGCCACCCCACATCCAGCCTACACAGAACTT...GTTCTCACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCACCACGATCAGCAACATaGCATTCTTCCGTCATTATT +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPPRSAT*HSSVII
Trigger: AATAATGACGGAAGAATGCCATGTTGCTGATCGTGG...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCCCACGATCAGCAACATaGCATTCTTCCGTCATTATT +
Preference number: 4 (lower is better)
Translates to: NPLQVPASRARWEHGLLIPRSAT*HSSVII
Trigger: AATAATGACGGAAGAATGCCATGTTGCTGATCGTGG...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTGGATCAGACAACTCTTaGGGTTTGGAACAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAAGSDNS*GLEQSL
Trigger: GAGAGACTGTTCCAAACCCCAAGAGTTGTCTGATCC...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTGTTGGACTAGTTCTGTaGATGTTACTGTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPVGLVL*MLLCAK
Trigger: CTTTGCACACAGTAACATCCACAGAACTAGTCCAAC...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACCAACGCCATGAGCCGGTCCTTTGAGGGAGGGCTTCGGACTGGGTGCCGGGTGTCTCCTTTTAAGAGTTaGACTAGTTCTGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: TNAMSRSFEGGLRTGCRVSPFKS*TSSVDV
Trigger: AACATCCACAGAACTAGTCCAACTCTTAAAAGGAGA...CACCCGGCACCCAGTCCGAAGCCCTCCCTCAAAGGACCGGCTCATGGCGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCTCCATGGGGAGGGTCCTTCTaGCCCCAAGCCAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: LTACCAFYPVLFSHLPPPWGGSF*PQANLC
Trigger: GCAGAGATTGGCTTGGGGCCAGAAGGACCCTCCCCA...TGGAGGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGAGGCAGGGATTTGGATaGATTCTTCTAGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVRQGFG*ILLGQR
Trigger: TCTCTGACCTAGAAGAATCCATCCAAATCCCTGCCT...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAGGGAGTTCTCGGAAATaGCCCAACAGGAGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGGSSRK*PNRRFD
Trigger: ATCAAACCTCCTGTTGGGCCATTTCCGAGAACTCCC...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATGGCTTATTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGCGCGGGTGGAGGGGCTaGCCCTCAGGCCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: MAYYHDQQHGILPSLFLGRGWRG*PSGPQN
Trigger: GTTCTGAGGGCCTGAGGGCCAGCCCCTCCACCCGCG...CCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAATAAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCGGCGGTACCTGGGTGTaGCACCTGGGCGGCGGCGGT +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCGGTWV*HLGGGG
Trigger: ACCGCCGCCGCCCAGGTGCCACACCCAGGTACCGCC...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GACCCCAACGGCCTGACCTGCTTCAACAGCATCCAGCACAGACACGTATTCTCCTCCGACCGCAGACTGTaGCTACCAATTATCAACTGC +
Preference number: 4 (lower is better)
Translates to: DPNGLTCFNSIQHRHVFSSDRRL*LPIINC
Trigger: GCAGTTGATAATTGGTAGCCACAGTCTGCGGTCGGA...GGAGAATACGTGTCTGTGCTGGATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CAA 72 bp CCTCTGCTGGTGTCAGGAGGCCTCCCCCATTTACTGTaGGCCCCTATTTCCTGCCTCATAAGTTTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: PLLVSGGLPHLL*APISCLISLSQ
Trigger: TTGGCTCAAACTTATGAGGCAGGAAATAGGGGCCAACAGTAAATGGGGGAGGCCTCCTGACACCAGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CAA 72 bp CTTCTTCCTCTACAGAGTGAGCCCTGGGTCAACGCCTaGTTCATCCACAGTGTCTCAGCAGGTAGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LLPLQSEPWVNA*FIHSVSAGSVC
Trigger: GCACACACTACCTGCTGAGACACTGTGGATGAACAAGGCGTTGACCCAGGGCTCACTCTGTAGAGGAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CAA 72 bp CTTGGCAGGAATCCAGAAAACGATCCACGCAGAACATaGCAATGTCACAGAAATGGCCGCCCACTGGCCACG +
Preference number: 4 (lower is better)
Translates to: LGRNPENDPRRT*QCHRNGRPLAT
Trigger: CGTGGCCAGTGGGCGGCCATTTCTGTGACATTGCAATGTTCTGCGTGGATCGTTTTCTGGATTCCTGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCGCGTTGCTGCGCTGGTaGTGGAGGAAAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGALLRW*WRKEAP
Trigger: AGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGC...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGTCCTATCTTTGCCTTTaGTGGGTACTATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVSYLCL*WVLLCS
Trigger: AGAGCACAATAGTACCCATCAAAGGCAAAGATAGGA...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCCTATCTTTGCCTTTaGTGGGTACTATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLSYLCL*WVLLCS
Trigger: AGAGCACAATAGTACCCATCAAAGGCAAAGATAGGA...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTCGATGCACTGCTATTTaGTGCAAACTCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVRCTAI*CKLLQQ
Trigger: TTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCG...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGGCAATGGGAATATACTaGGGAGTCACATATTTCAAC +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWAMGIY*GVTYFN
Trigger: GTTGAAATATGTGACTCCTCAGTATATTCCCATTGC...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAAATTTGGGTAGGTTTTaGGCACTGCATTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAENLGRF*ALHSFK
Trigger: CTTAAAGGAATGCAGTGCTCAAAACCTACCCAAATT...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTCAGAACCTCCACTGTaGCTCTCAACTGTATATACT +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCSEPPL*LSTVYT
Trigger: AGTATATACAGTTGAGAGTCACAGTGGAGGTTCTGA...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGAGGAGCCTCTTTCTTaGAAGATGATTAAAGGTATC +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAEEEPLS*KMIKGI
Trigger: GATACCTTTAATCATCTTTCAAGAAAGAGGCTCCTC...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCACTGCTGAAGGGAAATTaGCCATCAATTCATGTTATG +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPLLKGN*PSIHVM
Trigger: CATAACATGAATTGATGGTCAATTTCCCTTCAGCAG...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGAACGTAATTTCTAACTaGTGGCAAAACCGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWNVISN*WQNRVC
Trigger: GCAAACTCGGTTTTGCCATCAGTTAGAAATTACGTT...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAACCGCGGGGCATGCATaGTCTGCGGCAGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNITAGHA*SAAARP
Trigger: AGGACGGGCTGCCGCAGATCATGCATGCCCCGCGGT...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399848.7
ENST00000678400.1
CDS-3UTR TCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGTTAAGAACAGGTCTTTaGACTGAGCCTCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLLRTGL*TEPPSV
Trigger: CACTGAAGGAGGCTCAGTTCAAAGACCTGTTCTTAA...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR TCA 90 bp AAACAAAACTCCAAAGCAACAAACTGTGTACTCATGCATAACACCTCCAACAGGCCAGGCGCGGCTACCTaGTACCGGCCCAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KQNSKATNCVLMHNTSNRPGAAT*YRPKAR
Trigger: CCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTGG...CCTGTTGGAGGTGTTATGCATGAGTACACAGTTTGTTGCTTTGGAGTTTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp ACAGACACGTATTCTCCCAAACACTTCCTGATGACTTCAGTGGTGCTGGAGTTTAAACCCAGGGCTGGCTaGCCGCAGAGCCTTACCTCC +
Preference number: 4 (lower is better)
Translates to: TDTYSPKHFLMTSVVLEFKPRAG*PQSLTS
Trigger: GGAGGTAAGGCTCTGCGGTCAGCCAGCCCTGGGTTT...AAACTCCAGCACCACTGAAGTCATCAGGAAGTGTTTGGGAGAATACGTGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp GTGACCACCACGACGATGATGATGATTTGGGCGAACTCCAGCTCCGCACTGGTTCAGCTCCGCACTGGTTaGGTTTCCTTGTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: VTTTTMMMIWANSSSALVQLRTG*VSLFNS
Trigger: ACTGTTGAACAAGGAAACTCAACCAGTGCGGAGCTG...AACCAGTGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR GCA 90 bp GAACAAGGGACAAAAGTCAGCGGTATGCCCAGGAGTGTTCATTCCCACCAAATGCGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: EQGTKVSGMPRSVHSHQMRLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...CATTTGGTGGGAATGAACACTCCTGGGCATACCGCTGACTTTTGTCCCTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGACTGCTGCAGGTGCTTaGACTGATGCCCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPATAAGA*TDARVA
Trigger: AGCAACTCGGGCATCAGTGCAAGCACCTGCAGCAGT...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGTTTCTCCAGCTGAAGTaGACGTTGGAAGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLFLQLK*TLEGIR
Trigger: TCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAA...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTTTCTCCAGCTGAAGTaGACGTTGGAAGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAAFLQLK*TLEGIR
Trigger: TCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAA...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTCAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAAASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAALKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLELKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCAAAAGTCAGCGGTATaGCCAGGAGTGTTCATTCCC +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAAQKSAV*PGVFIP
Trigger: GGGAATGAACACTCCTGGGCATACCGCTGACTTTTG...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTGGCAAAACCGAGTTTaGTTTTTGGGTCCGTATTAT +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPWQNRV*FLGPYY
Trigger: ATAATACGGACCCAAAAAGCAAACTCGGTTTTGCCA...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAGCACCTGCACGCGGGTaGTCCTTGTCCCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIAPARG*SLSQPQ
Trigger: CTGCGGCTGGGACAAGGAGCACCCGCGTGCAGGTGC...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCAAGTCCATCGCTCTaGTGGGCCGGCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGPSPSL*WAGLWE
Trigger: CTCCCAGAGGCCGGCCCAGCAGAGCGATGGACTTGG...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGACATAATCAGGTCCTCTaGAAGTGGGAGTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGHNQVL*KWESNC
Trigger: ACAGTTGGACTCCCACTTGCAGAGGACCTGATTATG...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR GCA 90 bp CGGCCTGACCTGCTTCAACAGCATCCAGCACAGACACGTATTCTCCCAAACACTGAGCCTCCTTCAGTGTaGTGTTGTTCAGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: RPDLLQQHPAQTRILPNTEPPSV*CCSGGH
Trigger: GTGACCACCTGAACAACAGCACACTGAAGGAGGCTC...AGTGTTTGGGAGAATACGTGTCTGTGCTGGATGCTGTTGAAGCAGGTCAGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCACGATGATGATGATTTaGGCGAACTCCAGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAATMMMI*ANSSSA
Trigger: AGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGT...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677910.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHSRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GTTCCCAGGCTTCCTATCTTTGCCTTTGATGGGTACTATTGTGCTCTCTGCATTTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: VPRLPIFAFDGYYCALCISRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...AATGCAGAGAGCACAATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp TTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCTCCACTGAAGCGATCCCTCTaGATGAAGGACGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: LTACCAFYPVLFSHLPPPLKRSL*MKDGAV
Trigger: CACAGCGCCGTCCTTCATCCAGAGGGATCGCTTCAG...TGGAGGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGRRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTTATGGTTCGGTTGGGTaGGGCCCTCACGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCYGSVG*GPHGLS
Trigger: CGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATA...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTGCTGCTGGGTGGGCATaGACCCCCGCTATACATAGC +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCAAGWA*TPAIHS
Trigger: GCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGC...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCACGAGTTGCTGCTGGGTaGGCATGGACCCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPRVAAG*AWTPAI
Trigger: TATAGCGGGGGTCCATGCCCACCCAGCAGCAACTCG...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGTGCCCGAGTTGCTGCTaGGTGGGCATGGACCCCCGC +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLCPSCC*VGMDPR
Trigger: GCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCA...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGAGGCGCCTGGGTGGTaGCCCATCACCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGEAPGW*PITSLY
Trigger: ATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCGAGGAAAGAGGCGCCTaGGTGGTGGCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTEERGA*VVAHHL
Trigger: GAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTC...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 4 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTCTCCACTTTATACCTTaGCACACAACACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPLHFIP*HTTQEF
Trigger: AAATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAG...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTTTCTTGGATGCTTCTaGGGACCACTCCAGGATATT +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAAFLGCF*GPLQDI
Trigger: AATATCCTGGAGTGGTCCCCAGAAGCATCCAAGAAA...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGTTTCTTGGATGCTTCTaGGGACCACTCCAGGATATT +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLFLGCF*GPLQDI
Trigger: AATATCCTGGAGTGGTCCCCAGAAGCATCCAAGAAA...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTCCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTCCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTTAAGGCTGCATAGGTaGGAGTCATGGAATCATCAT +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSLRLHR*ESWNHH
Trigger: ATGATGATTCCATGACTCCCACCTATGCAGCCTTAA...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTGTTGGACTAGTTCTGTaGATGTTACTGTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFVGLVL*MLLCAK
Trigger: CTTTGCACACAGTAACATCCACAGAACTAGTCCAAC...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGAGAAGAGAGGCTAATCTaGAGAGCCAGTGAACCTTCA +
Preference number: 4 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGEERLI*RASEPS
Trigger: TGAAGGTTCACTGGCTCTCCAGATTAGCCTCTCTTC...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCATCTCGCCAATACTGTaGACATGTGCAACACATTCA +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASISPIL*TCATHS
Trigger: TGAATGTGTTGCACATGTCCACAGTATTGGCGAGAT...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTGGATTTCTTGTGGCTTaGGTGTGTGTCCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: PTLHMAECTADKPFSTRSGFLVA*VCVHVF
Trigger: AAACACATGGACACACACCCAAGCCACAAGAAATCC...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679177.1
CDS-3UTR CCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGATCTTGGGATTTCTTGTaGCTTGGGTGTGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGSWDFL*LGCVSM
Trigger: CATGGACACACACCCAAGCCACAAGAAATCCCAAGA...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp AGTATCTGGCCTGAGGACATATTTGAAGTGCTCTGCACCAGAGCCTTCCTAAAAAGCGGTGCTGGCAGCTaGCGGTGGTGGAAATGGCGA +
Preference number: 4 (lower is better)
Translates to: SIWPEDIFEVLCTRAFLKSGAGS*RWWKWR
Trigger: TCGCCATTTCCACCACCGCCAGCTGCCAGCACCGCT...TTTTAGGAAGGCTCTGGTGCAGAGCACTTCAAATATGTCCTCAGGCCAGATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGGAGAGGTCCTTCACTTaGCTGGCTGACAGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKERSFT*LADSQV
Trigger: GACTTGGCTGTCAGCCAGCCAAGTGAAGGACCTCTC...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTACCGAGTTTGCTTTTTaGGTCCGTATTATGATGGGA +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFTEFAF*VRIMMG
Trigger: TCCCATCATAATACGGACCCAAAAAGCAAACTCGGT...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp GATGATTTGGGCGAACTCCAGCTCCGTAACAGCGATGGAGCCGTGAACAGAGCAGGGAGTTCTCGGAAATaGCCCAACAGGAGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: DDLGELQLRNSDGAVNRAGSSRK*PNRRFD
Trigger: ATCAAACCTCCTGTTGGGCCATTTCCGAGAACTCCC...TGCTCTGTTCACGGCTCCATCGCTGTTACGGAGCTGGAGTTCGCCCAAATCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR CCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCGCGGGTGGAGGGGCTaGCCCTCAGGCCCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFRGWRG*PSGPQN
Trigger: GTTCTGAGGGCCTGAGGGCCAGCCCCTCCACCCGCG...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTTGCTGGGCCGGCCTCTaGGAGCATCCGCGGCCCACC +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLICWAGL*EHPRPT
Trigger: GGTGGGCCGCGGATGCTCCCAGAGGCCGGCCCAGCA...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAAGTCCATCGCTCTGCTaGGCCGGCCTCTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGSPSLC*AGLWEH
Trigger: ATGCTCCCAGAGGCCGGCCCAGCAGAGCGATGGACT...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGAGAAGCCCTAAGAACGAAGGGACCCCAACGGCCTGACCTGCTTCAACAGCATGTGCTGTTGTTCAGGTaGTCACTGGACATAATCAGG +
Preference number: 4 (lower is better)
Translates to: GEALRTKGPQRPDLLQQHVLLFR*SLDIIR
Trigger: CCTGATTATGTCCAGTGACCACCTGAACAACAGCAC...ATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTCCCTTCGTTCTTAGGGCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGATCCCTTGATCTCTGCTaGAAGCTTTCAGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGSLDLC*KLSVWK
Trigger: CTTCCACACTGAAAGCTTCCAGCAGAGATCAAGGGA...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR CCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCTGCACTTCTCAGGTTTaGCCTCACACCTGGACGTGT +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGCTSQV*PHTWTC
Trigger: ACACGTCCAGGTGTGAGGCCAAACCTGAGAAGTGCA...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR CCA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGATCCGACCGCAGACTGTaGCTACCAATTATCAACTGC +
Preference number: 4 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGSDRRL*LPIINC
Trigger: GCAGTTGATAATTGGTAGCCACAGTCTGCGGTCGGA...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR CCA 90 bp TATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTTCCTCTCTTTCCCCCACTTATCACTGTCTTaGTGGTATCCATTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: YHGSGGKVWAPHAFLSFPHLSLS*WYPFSG
Trigger: ACCAGAGAATGGATACCACCAAGACAGTGATAAGTG...GGGGAAAGAGAGGAACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp GCCCTCAAAGACCCTATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTTTTGGCGTCACCTGCTaGCTTTATCTTCCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: ALKDPIMGQGARSGPLMRFGVTC*LYLPLK
Trigger: TTTTAAAGGAAGATAAAGCCAGCAGGTGACGCCAAA...ACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATAGGGTCTTTGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTTGATAAACGCCTGGTaGAATTGTGGAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCLINAW*NCGEKF
Trigger: GAACTTCTCTCCACAATTCCACCAGGCGTTTATCAA...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677744.1
3UTR CAA 72 bp AAGGGGAAGTTCTCCCTTTGCCCACCTGTCATTCAATaGTCCTTTCACCTCAGTAGGCCAAGCACGCGGCAT +
Preference number: 4 (lower is better)
Translates to: KGKFSLCPPVIQ*SFHLSRPSTRH
Trigger: ATGCCGCGTGCTTGGCCTACTGAGGTGAAAGGACAATTGAATGACAGGTGGGCAAAGGGAGAACTTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGACCGCGGGGCATGCATaGTCTCCGAGGCGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRTAGHA*SPRRPA
Trigger: GGCTGGGCGCCTCGGAGATCATGCATGCCCCGCGGT...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000587757.5
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTACCGCGGGGCATGCATaGTCTCCGAGGCGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLITAGHA*SPRRPA
Trigger: GGCTGGGCGCCTCGGAGATCATGCATGCCCCGCGGT...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCTGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTCRCLH*CPSCCW
Trigger: CCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCA...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTAAAAATTCGCTTCTGCTCTCTTGGGATTTCTTGTGGCTTGGGTGTGTGTCCGCGTTGCTGCGCTGGTaGTGGAGGAAAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: FKNSLLLSWDFLWLGCVSALLRW*WRKEAP
Trigger: AGGCGCCTCTTTCCTCCATCACCAGCGCAGCAACGC...GGACACACACCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTTCCTATCTTTGCCTTTaGTGGGTACTATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PTLHMAECTADKPFSTRSSYLCL*WVLLCS
Trigger: AGAGCACAATAGTACCCATCAAAGGCAAAGATAGGA...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCTATCTTTGCCTTTaGTGGGTACTATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAASYLCL*WVLLCS
Trigger: AGAGCACAATAGTACCCATCAAAGGCAAAGATAGGA...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAAVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGCTTCCAAGCTGGGAGCCTCCTGTaGACTGAGCAGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPRSATWHSSVIISRGFQAGSLL*TEQPCR
Trigger: TCTGCAGGGCTGCTCAGTTCACAGGAGGCTCCCAGC...TTGGAAGCCCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCAATTTGGGTAGGTTTTaGGCACTGCATTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCNLGRF*ALHSFK
Trigger: CTTAAAGGAATGCAGTGCTCAAAACCTACCCAAATT...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTACAAACAAAAACCAGTaGCCTATCTACAGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLTNKNQ*PIYRGK
Trigger: CTTACCTCTGTAGATAGGTCACTGGTTTTTGTTTGT...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTACAAACAAAAACCAGTaGCCTATCTACAGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFTNKNQ*PIYRGK
Trigger: CTTACCTCTGTAGATAGGTCACTGGTTTTTGTTTGT...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGACAAACAAAAACCAGTaGCCTATCTACAGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVTNKNQ*PIYRGK
Trigger: CTTACCTCTGTAGATAGGTCACTGGTTTTTGTTTGT...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTTCAGAACCTCCACTGTaGCTCTCAACTGTATATACT +
Preference number: 4 (lower is better)
Translates to: PTLHMAECTADKPFSTRSSEPPL*LSTVYT
Trigger: AGTATATACAGTTGAGAGTCACAGTGGAGGTTCTGA...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGAGGAGCCTCTTTCTTaGAAGATGATTAAAGGTATC +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLEEPLS*KMIKGI
Trigger: GATACCTTTAATCATCTTTCAAGAAAGAGGCTCCTC...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCTGCTGAAGGGAAATTaGCCATCAATTCATGTTATG +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSLLKGN*PSIHVM
Trigger: CATAACATGAATTGATGGTCAATTTCCCTTCAGCAG...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTCTGCTGAAGGGAAATTaGCCATCAATTCATGTTATG +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLLLKGN*PSIHVM
Trigger: CATAACATGAATTGATGGTCAATTTCCCTTCAGCAG...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGAAAGCACCATTTTAAGTaGGGCACAACAAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGKHHFK*GTTKVG
Trigger: TCCCACCTTTGTTGTGCCTCACTTAAAATGGTGCTT...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAAAGCATTTGTGGCCTaGAAACCAGCTTCCGGCATA +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRKAFVA*KPASGI
Trigger: TATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTT...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTAAAAATTCGCTTCTGCTCTCTTGGGATTTCTTGTGGCTTGGGTGTGTGTCCACTCCAGCTCCGAGTTaGAGATGCCCGGAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: FKNSLLLSWDFLWLGCVSTPAPS*RCPEAG
Trigger: ACCCGCCTCCGGGCATCTTCAACTCGGAGCTGGAGT...GGACACACACCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp CCGATGATGGGTTCACTACCTTTGGGGACTTCCTGTGCAGCTCTGAACCCTGTTAACAGGTCTTTGAACTaGGCCTCCTTCAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PMMGSLPLGTSCAALNPVNRSLN*ASFSVL
Trigger: CAGCACACTGAAGGAGGCTCAGTTCAAAGACCTGTT...AACAGGGTTCAGAGCTGCACAGGAAGTCCCCAAAGGTAGTGAACCCATCATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp CCGATGATGGGTTCACTACCTTTGGGGACTTCCTGTGCAGCTCTGAACCCTGTTTTTCCTAAGCCCCGATaGTGGGTTCACTACCTTTGG +
Preference number: 4 (lower is better)
Translates to: PMMGSLPLGTSCAALNPVFPKPR*WVHYLW
Trigger: CCAAAGGTAGTGAACCCATCATCGGGGCTTAGGAAA...AACAGGGTTCAGAGCTGCACAGGAAGTCCCCAAAGGTAGTGAACCCATCATCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp GGAGAAGCCCTAAGAACGAAGGGACCCCAACGGCCTGACCTGCTTCAACAGCATTCTTCCCTGGTTCAATaGGGAGCTGAACTGAATCAT +
Preference number: 4 (lower is better)
Translates to: GEALRTKGPQRPDLLQQHSSLVQ*GAELNH
Trigger: ATGATTCAGTTCAGCTCCTCATTGAACCAGGGAAGA...ATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTCCCTTCGTTCTTAGGGCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp GCGCAGTGTCTGCTAAACGTGTTGGCTGCTGCTCTTATAAAAGCCAGTGCTTACACTGCTGCAGGTGCTTaGACTGATGCCCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: AQCLLNVLAAALIKASAYTAAGA*TDARVA
Trigger: AGCAACTCGGGCATCAGTGCAAGCACCTGCAGCAGT...GTAAGCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACACTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTCAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAAQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCGTAGGTTTTGAGCACTaGATTCCTTTAAGAATGCTA +
Preference number: 4 (lower is better)
Translates to: NPLQVPASRARWEHGLLIVGFEH*IPLRML
Trigger: TAGCATTCTTAAAGGAATGCAGTGCTCAAAACCTAC...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAAACGTGTTGGCTGCTaGTCTTATAAAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGKRVGC*SYKSQC
Trigger: GCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTT...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGCGGGCTCCTCATCTTTaGCTGACAGAGGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQRAPHL*LTEEER
Trigger: CCTCTCTTCCTCTGTCAGGCAAAGATGAGGAGCCCG...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGGTGGGGTGCATCTCCTaGTTCACCAAAACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKVGCIS*FTKTAG
Trigger: ACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCAC...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGGCTAGAGCTGTGGGGTaGATCTCCTGCTTCACCAAA +
Preference number: 4 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKARAVG*ISCFTK
Trigger: TTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGC...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGAGCCGCAGCTCTCTGTaGTCCGCCTCTGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKSRSSL*SASETF
Trigger: AAAAGTTTCAGAGGCGGAGCACAGAGAGCTGCGGCT...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTCCCTGGCCACGCCGCTaGCAGCATCCTGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFPWPRR*QHPAGS
Trigger: CGACCCTGCAGGATGCTGGCAGCGGCGTGGCCAGGG...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCCCGGACAAGCCTGTaGTCCAACTCTTGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGPRTSL*SNSCAV
Trigger: GACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGG...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAATGCCCGGAGGCGGGTaGTCGGTCACCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIMPGGG*SVTRRQ
Trigger: CTGTCTCCTGGTGACCGAGCACCCGCCTCCGGGCAT...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR GCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGCATAATCAGGTCCTCTaGAAGTGGGAGTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRHNQVL*KWESNC
Trigger: ACAGTTGGACTCCCACTTGCAGAGGACCTGATTATG...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR GCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCGAGCCTCCTTCAGTGTaGTGTTGTTCAGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSEPPSV*CCSGGH
Trigger: GTGACCACCTGAACAACAGCACACTGAAGGAGGCTC...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR GCA 90 bp AAAAGCTACCCTACAGAAATACCCAGTTTTTGGCGTCACCTGCTGGCTTTATCTAGAAACCAGGAGCTCTaGGGCAGGAAGCCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: KSYPTEIPSFWRHLLALSRNQEL*GRKPAV
Trigger: CACGGCCGGCTTCCTGCCGCAGAGCTCCTGGTTTCT...AGATAAAGCCAGCAGGTGACGCCAAAAACTGGGTATTTCTGTAGGGTAGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTACCAATTATCAACTaGCATCAACAGAAACCAGGA +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVLPIIN*HQQKPG
Trigger: TCCTGGTTTCTGTTGATGGCAGTTGATAATTGGTAG...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR GCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAATCCTGGGAGTTTCTGTaGGTGCTACGTGTGCATTTT +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLESWEFL*VLRVHF
Trigger: AAAATGCACACGTAGCACGCACAGAAACTCCCAGGA...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR CCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGSRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCCGGACAGGGAGATGGTaGGAGGAAGATCAATCTCGT +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSRTGRW*EEDQSR
Trigger: ACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCG...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGCGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPARRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGACCCCTGGTAAGGAGGTaGCTCTTCACCGTCGGACAG +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGPLVRR*LFTVGQ
Trigger: CTGTCCGACGGTGAAGAGCCACCTCCTTACCAGGGG...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACCCCCTGGTAAGGAGGTaGCTCTTCACCGTCGGACAG +
Preference number: 4 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHPLVRR*LFTVGQ
Trigger: CTGTCCGACGGTGAAGAGCCACCTCCTTACCAGGGG...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAATCAGACCAGGTTCCCAAATATGGTTCGGTTaGGTGGGGCCCTCACGGACT +
Preference number: 4 (lower is better)
Translates to: LGFFLQLKCTLEGIRPGSQIWFG*VGPSRT
Trigger: AGTCCGTGAGGGCCCCACCCAACCGAACCATATTTG...GGAACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTGCCCGAGTTGCTGCTaGGTGGGCATGGACCCCCGC +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCCPSCC*VGMDPR
Trigger: GCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCA...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGAGCTAGAGCTGTGGGGTGCATCTCCTGCTTCACCAAAACTGCAGGTGAGAACGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RARAVGCISCFTKTAGENGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...GTTCTCACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAAGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTCTCCACTTTATACCTTaGCACACAACACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLLHFIP*HTTQEF
Trigger: AAATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAG...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPTSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAETSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 4 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPTSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAAATCCTGCGGGAATTTaGGTAGGTTTTGAGCACTGC +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLENPAGI*VGFEHC
Trigger: GCAGTGCTCAAAACCTACCCAAATTCCCGCAGGATT...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTTAAGGCTGCATAGGTaGGAGTCATGGAATCATCAT +
Preference number: 4 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAALRLHR*ESWNHH
Trigger: ATGATGATTCCATGACTCCCACCTATGCAGCCTTAA...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTCACTCGTTACTAAACTaGACCCATGGGTTCTATAAG +
Preference number: 4 (lower is better)
Translates to: PTLHMAECTADKPFSTRSHSLLN*THGFYK
Trigger: CTTATAGAACCCATGGGTCCAGTTTAGTAACGAGTG...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCTTGTGTTCTTATAGATaGGATTCAAGATGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASLCSYR*DSRCLG
Trigger: CCCAAGGCATCTTGAATCCCATCTATAAGAACACAA...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATATGGAAGATAGAGGATaGCCCCTGTCAGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYMEDRG*PLSEKG
Trigger: TCCCTTCTCTGACAGGGGCCATCCTCTATCTTCCAT...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTCTAGCAATCAGTATCTaGCCTGAGGACATATTTGAA +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSLAISI*PEDIFE
Trigger: TTCAAATATGTCCTCAGGCCAGATACTGATTGCTAG...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCCTAGCATTTAGGATCTaGGCTGGAAGCAACATTTTT +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCLAFRI*AGSNIF
Trigger: AAAAATGTTGCTTCCAGCCCAGATCCTAAATGCTAG...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTATAATATGGGTCAGATaGGCAAAATTCCACGAACTG +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGIIWVR*AKFHEL
Trigger: CAGTTCGTGGAATTTTGCCCATCTGACCCATATTAT...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TTTCCTTCTGCTGAAGGGAAATTGACCATCAATTCATGTTATGACCTTGGCTTTGAACACGGGCGCCCCTaGCCACGCCGCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: FPSAEGKLTINSCYDLGFEHGRP*PRRCQH
Trigger: ATGCTGGCAGCGGCGTGGCCAGGGGCGCCCGTGTTC...AAAGCCAAGGTCATAACATGAATTGATGGTCAATTTCCCTTCAGCAGAAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTCGAATGCAGACTCCACGAGCCCGTCCAGCTGGAGTGGCATCTCCTCACTTTAGAAATACCCAGTTTTTaGCGTCACCTGCTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LECRLHEPVQLEWHLLTLEIPSF*RHLLAL
Trigger: TAAAGCCAGCAGGTGACGCCAAAAACTGGGTATTTC...TAAAGTGAGGAGATGCCACTCCAGCTGGACGGGCTCGTGGAGTCTGCATTCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp TACTCTGAGCTGCCTGTTTATAGCCATGTATTTATGTACAACATTTGCATGACAACCGGGCGGCGGTGGTaGCAGGAAGACGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: YSELPVYSHVFMYNICMTTGRRW*QEDGWG
Trigger: CCCCCACCCGTCTTCCTGCCACCACCGCCGCCCGGT...TGTCATGCAAATGTTGTACATAAATACATGGCTATAAACAGGCAGCTCAGAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp ACAGACACGTATTCTCCCAAACACTTCCTGATGACTTCAGTGGTGCTGGAGTTTCACCCTCCCACATGTTaGCTGGGCCTGCTTGGCTAC +
Preference number: 4 (lower is better)
Translates to: TDTYSPKHFLMTSVVLEFHPPTC*LGLLGY
Trigger: GTAGCCAAGCAGGCCCAGCCAACATGTGGGAGGGTG...AAACTCCAGCACCACTGAAGTCATCAGGAAGTGTTTGGGAGAATACGTGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCACTGCGGCCTGCACTTaGATCTGGTCACCAGTGACA +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSTAACT*IWSPVT
Trigger: TGTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGT...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR TCA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGTCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQSRTLG*VPSAVQ
Trigger: CTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGA...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCTTCAAAAGAGCTACTaGTCTAAATCACCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSLQKSY*SKSPFP
Trigger: AGGAAAAGGTGATTTAGATCAGTAGCTCTTTTGAAG...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTCAAAAGAGCTACTaGTCTAAATCACCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFLQKSY*SKSPFP
Trigger: AGGAAAAGGTGATTTAGATCAGTAGCTCTTTTGAAG...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCATTTACTTATTCCTCTaGCACAGTTTCTGCAACAAC +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCIYLFL*HSFCNN
Trigger: GTTGTTGCAGAAACTGTGTCAGAGGAATAAGTAAAT...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGGCCCAACAGGAGGTTTaGTGTCACGAACGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQAQQEV*CHERRA
Trigger: AGCTCTACGTTCGTGACATCAAACCTCCTGTTGGGC...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGTGTACTGGCAAGGCGTaGGGTCCTAACCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGCTGKA*GPNRSR
Trigger: CCTGCTGCGGTTAGGACCTCACGCCTTGCCAGTACA...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR TCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGACACGAACGTAGAGCTTaGACCGCTGCTAATCCCGCC +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGHERRA*TAANPA
Trigger: GGCGGGATTAGCAGCGGTTCAAGCTCTACGTTCGTG...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCCGGGTATCCTCGGGTaGCCGCCTCGAGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRPGILG*PPRAPK
Trigger: CTTTGGAGCTCGAGGCGGTCACCCGAGGATACCCGG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679091.1
CDS-3UTR TCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGACATCCCCATCCCAACTaGGTGAGCATGCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGHPHPN*VSMLCG
Trigger: CCCACAGAGCATGCTCACTCAGTTGGGATGGGGATG...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679091.1
CDS-3UTR GCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTCCCGGAGCTGCAGGGTaGAGGGCCCCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFPGAAG*RAPGKE
Trigger: CTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGG...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTCCCGGAGCTGCAGGGTaGAGGGCCCCTGGTAAGGAG +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIPGAAG*RAPGKE
Trigger: CTCCTTACCAGGGGCCCTGCACCCTGCAGCTCCGGG...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGACGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGRLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGETAVC*PCVRCC
Trigger: GCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTC...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGCTGAAACTGCAGTCTaGTGCCCCTGTGTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGAETAV*CPCVRC
Trigger: GCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGACAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGACACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCGCAGTGTCTGCTAAACGTGTTGGCTGCTGCTCTTATAAAAGCCAGTGCTTACGCTAGAGCTGTGGGGTaGATCTCCTGCTTCACCAAA +
Preference number: 4 (lower is better)
Translates to: AQCLLNVLAAALIKASAYARAVG*ISCFTK
Trigger: TTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGC...GTAAGCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACACTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATGAATTCACAAGTCTCTaGTCTGAGCCCCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYEFTSL*SEPLLE
Trigger: CTCAAGAAGGGGCTCAGAGCAGAGACTTGTGAATTC...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCGGGGGCCGGGCTCCCTaGGCCCACAGCAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFGGRAP*AHSRMS
Trigger: AGACATTCTGCTGTGGGCGCAGGGAGCCCGGCCCCC...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCTCAATAAACAAGCAGTaGAGCAAGCCCCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSSINKQ*SKPPRW
Trigger: CCATCTCGGGGGCTTGCTGCACTGCTTGTTTATTGA...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTGCAACAACAAAAATGTaGACTTTTCACTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PTLHMAECTADKPFSTRSATTKM*TFHCCL
Trigger: CAGGCAACAGTGAAAAGTGCACATTTTTGTTGTTGC...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCTGCAGGGTCGCACCTaGACGCGGGTGCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRLQGRT*TRVLLV
Trigger: GACAAGGAGCACCCGCGTGCAGGTGCGACCCTGCAG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCTGCAGGGTCGCACCTaGACGCGGGTGCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFLQGRT*TRVLLV
Trigger: GACAAGGAGCACCCGCGTGCAGGTGCGACCCTGCAG...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCAGCTTCCGGCATACTaGTCCCCGGACAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGQLPAY*SPDKPV
Trigger: CACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCTG...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGAACAGAAGAAGAGGGAATCCCTCGAATaGAGACTCCACGAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: TSPGNPKLHSGELQEQKKRESLE*RLHEPV
Trigger: GACGGGCTCGTGGAGTCTGCATTCGAGGGATTCCCT...CTTCTTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp GACCCCAACGGCCTGACCTGCTTCAACAGCATCCAGCACAGACACGTATTCTCCAGAGGCATGAGTGTCTaGGCTATTTTTAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: DPNGLTCFNSIQHRHVFSRGMSV*AIFKEL
Trigger: GAGCTCTTTAAAAATAGCGCAGACACTCATGCCTCT...GGAGAATACGTGTCTGTGCTGGATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp CCGATGATGGGTTCACTACCTTTGGGGACTTCCTGTGCAGCTCTGAACCCTGTTCAGGAAATCCCAAGCTaGACAGTGGAGAATTACAGG +
Preference number: 4 (lower is better)
Translates to: PMMGSLPLGTSCAALNPVQEIPS*TVENYR
Trigger: CCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTG...AACAGGGTTCAGAGCTGCACAGGAAGTCCCCAAAGGTAGTGAACCCATCATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCCTGGTAAGGAGGTaGCTCTTCACCGTCGGACAG +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGPLVRR*LFTVGQ
Trigger: CTGTCCGACGGTGAAGAGCCACCTCCTTACCAGGGG...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGTATGGTTCGGTTGGGTaGGGCCCTCACGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGYGSVG*GPHGLS
Trigger: CGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATA...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGGCTGCTGGGTGGGCATaGACCCCCGCTATACATAGC +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGAAGWA*TPAIHS
Trigger: GCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGC...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTTGCCCGAGTTGCTGCTaGGTGGGCATGGACCCCCGC +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFCPSCC*VGMDPR
Trigger: GCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCA...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGAGGCGCCTGGGTGGTaGCCCATCACCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLEAPGW*PITSLY
Trigger: ATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTC...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAGAGGCGCCTGGGTGGTaGCCCATCACCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAEAPGW*PITSLY
Trigger: ATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTC...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAGAGGAAAGAGGCGCCTaGGTGGTGGCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIEERGA*VVAHHL
Trigger: GAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTC...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTCCTGGGAGTTTCTGTGCGTGCTACGTGTGCATTTTCCCCTTGGAAACAGAACGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLGVSVRATCAFSPWKQNGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...GTTCTGTTTCCAAGGGGAAAATGCACACGTAGCACGCACAGAAACTCCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR CCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTCCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGACCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGTSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 4 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFTSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCTSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CATTTTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCAAGTTCTGTGTAGGCTaGATGTGGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HFNCMLCFLPGALQSLAPKFCVG*MWGGCW
Trigger: CCAGCAGCCACCCCACATCCAGCCTACACAGAACTT...GGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTTACAATAACCCACAATaGCTTATTACCACGATCAGC +
Preference number: 4 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVYNNPQ*LITTIS
Trigger: GCTGATCGTGGTAATAAGCCATTGTGGGTTATTGTA...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGTTGTGTTCTTATAGATaGGATTCAAGATGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLLCSYR*DSRCLG
Trigger: CCCAAGGCATCTTGAATCCCATCTATAAGAACACAA...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGCTAGCAATCAGTATCTaGCCTGAGGACATATTTGAA +
Preference number: 4 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLLAISI*PEDIFE
Trigger: TTCAAATATGTCCTCAGGCCAGATACTGATTGCTAG...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGAGCAAGCCCCCGAGATaGGGGCGCATCCAGTCATGG +
Preference number: 4 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRSKPPR*GRIQSW
Trigger: CCATGACTGGATGCGCCCCCATCTCGGGGGCTTGCT...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCTGTGGAGCATGTTCGTaGCATGAAGGCTTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSCGACS*HEGLAP
Trigger: TGGAGCCAAGCCTTCATGCCACGAACATGCTCCACA...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAATTTTGTTCTACCCATTaGGTAGGATATGTGCATAAT +
Preference number: 4 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAEFCSTH*VGYVHN
Trigger: ATTATGCACATATCCTACCCAATGGGTAGAACAAAA...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGGACATGAATGGGAATaGATGAGAGGTCCTTCACTT +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAAGHEWE*MRGPSL
Trigger: AAGTGAAGGACCTCTCATCCATTCCCATTCATGTCC...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTAATAAGCTGATAATATaGGTCAGATGGGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPNKLII*VRWAKF
Trigger: GAATTTTGCCCATCTGACCCATATTATCAGCTTATT...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGACCCTACAGTATACGATaGAAACAACACGTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGPYSIR*KQHVGL
Trigger: TAGACCCACGTGTTGTTTCCATCGTATACTGTAGGG...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp GAAGCCCTAAGAACGAAGGGACCCCAACGGCCTGACCTGCTTCAACAGCATCCAATTTTTAAAGAGCTCTaGGGAAGTGTGGTTGTCCCA +
Preference number: 4 (lower is better)
Translates to: EALRTKGPQRPDLLQQHPIFKEL*GSVVVP
Trigger: TGGGACAACCACACTTCCCCAGAGCTCTTTAAAAAT...TGGATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTCCCTTCGTTCTTAGGGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCGTGGGCTTCGGCCCCTaGGTTCACCTCATTGCTGTC +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSVGFGP*VHLIAV
Trigger: GACAGCAATGAGGTGAACCCAGGGGCCGAAGCCCAC...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS-3UTR CCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGTCCGCATCAACTCCCTaGGTGGGCTTCGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRSASTP*VGFGPW
Trigger: CCAGGGGCCGAAGCCCACCCAGGGAGTTGATGCGGA...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677744.1
3UTR CAA 72 bp GCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTaGCCCCCTCCACTGTTCTCTGACTGTCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: ACCAFYPVLFSH*PPPLFSDCPVL
Trigger: AAGAACTGGACAGTCAGAGAACAGTGGAGGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCATCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPSRTLG*VPSAVQ
Trigger: CTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGA...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGTGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRCRCLH*CPSCCW
Trigger: CCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCA...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGTGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLCRCLH*CPSCCW
Trigger: CCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCA...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CATTTTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCGCTCATCTTGTTATGTaGAGAGGCCACAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: HFNCMLCFLPGALQSLAPAHLVM*RGHRGP
Trigger: TGGGCCTCTGTGGCCTCTTCACATAACAAGATGAGC...GGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGTCAGAACCTCCACTGTaGCTCTCAACTGTATATACT +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRSEPPL*LSTVYT
Trigger: AGTATATACAGTTGAGAGTCACAGTGGAGGTTCTGA...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CATTTTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCATCTGTGGGCACACCTaGCCAAGAATCCACTGCAAG +
Preference number: 4 (lower is better)
Translates to: HFNCMLCFLPGALQSLAPICGHT*PRIHCK
Trigger: CTTGCAGTGGATTCTTGGTCAGGTGTGCCCACAGAT...GGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTATCTGTGGGCACACCTaGCCAAGAATCCACTGCAAG +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCICGHT*PRIHCK
Trigger: CTTGCAGTGGATTCTTGGTCAGGTGTGCCCACAGAT...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGCTTCCAACGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LPRSATWHSSVIISRGFQRLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...TTGGAAGCCCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCACTGCTGCAGGTGCTTaGACTGATGCCCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTTAAGA*TDARVA
Trigger: AGCAACTCGGGCATCAGTGCAAGCACCTGCAGCAGT...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGTGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLCPCVR*CAGDGG
Trigger: TCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATGGCTTATTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGTGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: MAYYHDQQHGILPSLFLGCPCVR*CAGDGG
Trigger: TCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA...CCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAATAAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGCTTCCAAGCTGAAACTGCAGTCTaGTGCCCCTGTGTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: LPRSATWHSSVIISRGFQAETAV*CPCVRC
Trigger: GCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGC...TTGGAAGCCCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCAAATATGGTTCGGTTGGGTGGGGCCCTCACGGACTCTCGGTTGAGTTCCATCCAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: SNMVRLGGALTDSRLSSIQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...GATGGAACTCAACCGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR GCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAAQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCCTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSLKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCCATATTTCAACAGTATaGAGAATAACCACCTTGCAT +
Preference number: 4 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCHISTV*RITTLH
Trigger: ATGCAAGGTGGTTATTCTGCATACTGTTGAAATATG...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCAGTGCTTTTTACCCGGTaGTCTTCAGTCACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPVLFTR*SSVTCP
Trigger: GGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCAC...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTCTTATAAAAGCCAGTaGTTACATCTGCAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGSYKSQ*LHLQKK
Trigger: TTTCTTCTGCAGATGTAAGCACTGGCTTTTATAAGA...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCTCTTATAAAAGCCAGTaGTTACATCTGCAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASSYKSQ*LHLQKK
Trigger: TTTCTTCTGCAGATGTAAGCACTGGCTTTTATAAGA...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCTCCACTGCAAGTCCCTaGCAGCAGGGCCCGATGGGA +
Preference number: 4 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFSTASP*QQGPMG
Trigger: TCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGA...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCCAAAAGTCAGCGGTATaGCCAGGAGTGTTCATTCCC +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSQKSAV*PGVFIP
Trigger: GGGAATGAACACTCCTGGGCATACCGCTGACTTTTG...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTTAAAAATTCGCTTCTaGTCTCTTGGGATTTCTTGT +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSLKIRF*SLGISC
Trigger: ACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAA...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGAATATTTGAAGTGCTCTaGACCAGAGCCTTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGIFEVL*TRAFLK
Trigger: TTTTAGGAAGGCTCTGGTGCAGAGCACTTCAAATAT...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATGCACCTGCACGCGGGTaGTCCTTGTCCCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDAPARG*SLSQPQ
Trigger: CTGCGGCTGGGACAAGGAGCACCCGCGTGCAGGTGC...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTCCAAGTCCATCGCTCTaGTGGGCCGGCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFPSPSL*WAGLWE
Trigger: CTCCCAGAGGCCGGCCCAGCAGAGCGATGGACTTGG...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATGGCTTATTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGCCCCGGACAAGCCTGTaGTCCAACTCTTGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: MAYYHDQQHGILPSLFLGPRTSL*SNSCAV
Trigger: GACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGG...CCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAATAAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACCCCCGGACAAGCCTGTaGTCCAACTCTTGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHPRTSL*SNSCAV
Trigger: GACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGG...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCACGATGATGATGATTTaGGCGAACTCCAGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSTMMMI*ANSSSA
Trigger: AGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGT...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677910.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTGCTGCTGGGTGGGCATGGACCCCCGCTATACATAGCAATGTCTATTAAATCACGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 4 (lower is better)
Translates to: LLLGGHGPPLYIAMSIKSRRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...TGATTTAATAGACATTGCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCACGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 4 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPRRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCAATCACTGTCAAATATaGTTCGGTTGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSNHCQI*FGWVGP
Trigger: GGGCCCCACCCAACCGAACCATATTTGACAGTGATT...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATGGCTTATTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGCTGCTGGGTGGGCATaGACCCCCGCTATACATAGC +
Preference number: 4 (lower is better)
Translates to: MAYYHDQQHGILPSLFLGAAGWA*TPAIHS
Trigger: GCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGC...CCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAATAAGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACCGAGTTGCTGCTGGGTaGGCATGGACCCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHRVAAG*AWTPAI
Trigger: TATAGCGGGGGTCCATGCCCACCCAGCAGCAACTCG...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCGAGGCGCCTGGGTGGTaGCCCATCACCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFEAPGW*PITSLY
Trigger: ATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTC...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCGAGGAAAGAGGCGCCTaGGTGGTGGCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCEERGA*VVAHHL
Trigger: GAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTC...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 4 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCAAGAAATTGCACTGCTaGAGGATGAGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPKKLHC*RMRAAL
Trigger: CAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTT...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCAAGAAATTGCACTGCTaGAGGATGAGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSKKLHC*RMRAAL
Trigger: CAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTT...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTGCTGGGTGGGCATGGACCCCCGCTATACATAGCAATGTCTATTAAATCACTGAAGAAATTGCACTGCTaGAGGATGAGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: LLGGHGPPLYIAMSIKSLKKLHC*RMRAAL
Trigger: CAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTT...CAGTGATTTAATAGACATTGCTATGTATAGCGGGGGTCCATGCCCACCCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACCACGATCAGCAACATaGCATTCTTCCGTCATTATT +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEPRSAT*HSSVII
Trigger: AATAATGACGGAAGAATGCCATGTTGCTGATCGTGG...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCTTAAGGCTGCATAGGTaGGAGTCATGGAATCATCAT +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAALRLHR*ESWNHH
Trigger: ATGATGATTCCATGACTCCCACCTATGCAGCCTTAA...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATACAACTCTTGGGGTTTaGAACAGTCTCTCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYTTLGV*NSLSSY
Trigger: GTAACTGGAGAGACTGTTCCAAACCCCAAGAGTTGT...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAATCTCGCCAATACTGTaGACATGTGCAACACATTCA +
Preference number: 4 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGISPIL*TCATHS
Trigger: TGAATGTGTTGCACATGTCCACAGTATTGGCGAGAT...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCTGAGAGCTGGTGTCTCTCCAGCAGAGGCCTTCCAACTGTCACTGGAACAAGAATCTCGCCAATACTGTaGACATGTGCAACACATTCA +
Preference number: 4 (lower is better)
Translates to: PESWCLSSRGLPTVTGTRISPIL*TCATHS
Trigger: TGAATGTGTTGCACATGTCCACAGTATTGGCGAGAT...TCTTGTTCCAGTGACAGTTGGAAGGCCTCTGCTGGAGAGACACCAGCTCTCAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CCTGAGAGCTGGTGTCTCTCCAGCAGAGGCCTTCCAACTGTCACTGGAACAAGACACTCGTTACTAAACTaGACCCATGGGTTCTATAAG +
Preference number: 4 (lower is better)
Translates to: PESWCLSSRGLPTVTGTRHSLLN*THGFYK
Trigger: CTTATAGAACCCATGGGTCCAGTTTAGTAACGAGTG...TCTTGTTCCAGTGACAGTTGGAAGGCCTCTGCTGGAGAGACACCAGCTCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCTCGCTTCTGCTCTCTTaGGATTTCTTGTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSSLLLS*DFLWLG
Trigger: CCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGA...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCAGGAAGGCAGGGATTTaGATGGATTCTTCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGRKAGI*MDSSRS
Trigger: TGACCTAGAAGAATCCATCCAAATCCCTGCCTTCCT...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGGCAGCTGGCGGTGGTaGAAATGGCGAACGGTAAGC +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLGSWRW*KWRTVS
Trigger: GCTTACCGTTCGCCATTTCCACCACCGCCAGCTGCC...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CATTTTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCGAGGCACAACAAAGGTaGGAGCATCAAGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HFNCMLCFLPGALQSLAPEAQQR*EHQVQE
Trigger: CTCCTGCACTTGATGCTCCCACCTTTGTTGTGCCTC...GGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCAGAGGCACAACAAAGGTaGGAGCATCAAGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPEAQQR*EHQVQE
Trigger: CTCCTGCACTTGATGCTCCCACCTTTGTTGTGCCTC...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGAATAATATGGGTCAGATaGGCAAAATTCCACGAACTG +
Preference number: 4 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGIIWVR*AKFHEL
Trigger: CAGTTCGTGGAATTTTGCCCATCTGACCCATATTAT...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCAGATACGTGACAGGTaGAAATCTTTTTCTGTATAT +
Preference number: 4 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVQIRDR*KSFSVY
Trigger: ATATACAGAAAAAGATTTCCACCTGTCACGTATCTG...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTCAGATACGTGACAGGTaGAAATCTTTTTCTGTATAT +
Preference number: 4 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSQIRDR*KSFSVY
Trigger: ATATACAGAAAAAGATTTCCACCTGTCACGTATCTG...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTAGTGCCGGGCCGGGCTaGGTGCTTGTCGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLISAGPG*VLVASC
Trigger: ACAGGAAGCGACAAGCACCCAGCCCGGCCCGGCACT...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399848.7
ENST00000677055.1
CDS-3UTR CCA 90 bp GAATTACAGGAACAGAAGAAGTGGTGTGAAGTCTGTCGGTCTCTTCCCTGGTTCTGCACTTCTCAGGTTTaGCCTCACACCTGGACGTGT +
Preference number: 4 (lower is better)
Translates to: ELQEQKKWCEVCRSLPWFCTSQV*PHTWTC
Trigger: ACACGTCCAGGTGTGAGGCCAAACCTGAGAAGTGCA...GAACCAGGGAAGAGACCGACAGACTTCACACCACTTCTTCTGTTCCTGTAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp GTGAGCCCTGGGTCAACGCCTTGTTCATCCACAGTGTCTCAGCAGGTAGTGTGTAAACACAGCTGCACATaGAATGGAACCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: VSPGSTPCSSTVSQQVVCKHSCT*NGTFIS
Trigger: GGAAATGAAGGTTCCATTCCATGTGCAGCTGTGTTT...ACACACTACCTGCTGAGACACTGTGGATGAACAAGGCGTTGACCCAGGGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp CGGCCTGACCTGCTTCAACAGCATCCAGCACAGACACGTATTCTCCCAAACACTGTGGTATCCATTCTCTaGTCTTCTTCCTCTACAGAG +
Preference number: 4 (lower is better)
Translates to: RPDLLQQHPAQTRILPNTVVSIL*SSSSTE
Trigger: CTCTGTAGAGGAAGAAGACCAGAGAATGGATACCAC...AGTGTTTGGGAGAATACGTGTCTGTGCTGGATGCTGTTGAAGCAGGTCAGGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp AAAGCAACAAACTGTGTACTCATGCATAACACCTCCAACAGGAACAAACTAATTGAAATGGCCGCCCACTaGCCACGAAGCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: KATNCVLMHNTSNRNKLIEMAAH*PRSPGP
Trigger: GGGGCCAGGGCTTCGTGGCCAGTGGGCGGCCATTTC...AATTAGTTTGTTCCTGTTGGAGGTGTTATGCATGAGTACACAGTTTGTTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CAA 72 bp AGACCCACAGACAGACACAAACACACACACGCGGATTaGGCTTTAAGGCTGCATAGGTGGGAGTCATGGAAT +
Preference number: 4 (lower is better)
Translates to: RPTDRHKHTHAD*ALRLHRWESWN
Trigger: ATTCCATGACTCCCACCTATGCAGCCTTAAAGCCAAATCCGCGTGTGTGTGTTTGTGTCTGTCTGTGGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
3UTR CAA 72 bp ATGCGTTCCTCTCTTTCCCCAGGCCAAGTAAACACCTaGGCAGGAATCCAGAAAACGATCCACGCAGAACAT +
Preference number: 4 (lower is better)
Translates to: MRSSLSPGQVNT*AGIQKTIHAEH
Trigger: ATGTTCTGCGTGGATCGTTTTCTGGATTCCTGCCAAGGTGTTTACTTGGCCTGGGGAAAGAGAGGAACGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CAA 72 bp GCAATGTCTATTAAATCACTGTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGACTCTCGGTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: AMSIKSLSNMVR*GGALTDSRLSS
Trigger: GGAACTCAACCGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATATTTGACAGTGATTTAATAGACATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CAA 72 bp TCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGTTCCCAGGCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: SLLGFFLQLKCT*EGIRPGSQASY
Trigger: ATAGGAAGCCTGGGAACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
3UTR CAA 72 bp GGGAGTTTCTGTGCGTGCTACGTGTGCATTTTCCCCTaGGAAACAGAACACACTAGGAACTCCAAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: GSFCACYVCIFP*ETEHTRNSKSH
Trigger: GTGACTCTTGGAGTTCCTAGTGTGTTCTGTTTCCAAGGGGAAAATGCACACGTAGCACGCACAGAAACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR TCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGATCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGSRTLG*VPSAVQ
Trigger: CTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGA...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCTCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTSRTLG*VPSAVQ
Trigger: CTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGA...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCCRCLH*CPSCCW
Trigger: CCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCA...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGTGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRCRCLH*CPSCCW
Trigger: CCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCA...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GGTGAAAGAGATCAAACGGAGATACGCAGAAGTTCAAGAAGTCCTCGCCTGGGTGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GERDQTEIRRSSRSPRLGVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...ACCCAGGCGAGGACTTCTTGAACTTCTGCGTATCTCCGTTTGATCTCTTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp GAACAAGGGACAAAAGTCAGCGGTATGCCCAGGAGTGTTCATTCCCACCAAATGGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: EQGTKVSGMPRSVHSHQMVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...CATTTGGTGGGAATGAACACTCCTGGGCATACCGCTGACTTTTGTCCCTTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPADIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGTGCACTGCTGGAGGATaGGGGCAGCACTGCATGATA +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGCTAGG*GQHCMI
Trigger: TATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCA...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGGCTGGGAGCCTCCTGTaGACTGAGCAGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRAGSLL*TEQPCR
Trigger: TCTGCAGGGCTGCTCAGTTCACAGGAGGCTCCCAGC...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGTCACTGGAACAAGACTaGATCCAGTCTCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQSLEQD*IQSQNL
Trigger: GAGGTTCTGAGACTGGATTCAGTCTTGTTCCAGTGA...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAATCTGTGGGCACACCTaGCCAAGAATCCACTGCAAG +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGICGHT*PRIHCK
Trigger: CTTGCAGTGGATTCTTGGTCAGGTGTGCCCACAGAT...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGACTGCAGGTGAGAACTaGAATGATGGAATCACTCAC +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPATAGEN*NDGITH
Trigger: GTGAGTGATTCCATCATTTCAGTTCTCACCTGCAGT...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAACGTAATTTCTAACTaGTGGCAAAACCGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRNVISN*WQNRVC
Trigger: GCAAACTCGGTTTTGCCATCAGTTAGAAATTACGTT...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCGCCCAACAGGAGGTTTaGTGTCACGAACGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGAQQEV*CHERRA
Trigger: AGCTCTACGTTCGTGACATCAAACCTCCTGTTGGGC...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCTCTGTGCTCCGCCTCTaGAACTTTTACACTATACAG +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSSVLRL*NFYTIQ
Trigger: CTGTATAGTGTAAAAGTTTCAGAGGCGGAGCACAGA...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATACCGCGGGGCATGCATaGTCTGCGGCAGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYTAGHA*SAAARP
Trigger: AGGACGGGCTGCCGCAGATCATGCATGCCCCGCGGT...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399848.7
ENST00000678400.1
CDS-3UTR TCA 90 bp TTGCTGCTGGGTGGGCATGGACCCCCGCTATACATAGCAATGTCTATTAAATCAAACAGGTCTTTGAACTaGGCCTCCTTCAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LLLGGHGPPLYIAMSIKSNRSLN*ASFSVL
Trigger: CAGCACACTGAAGGAGGCTCAGTTCAAAGACCTGTT...TGATTTAATAGACATTGCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR GCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCACTGGACCGCGGGGCATaGATGATCTCCGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSLDRGA*MISEAP
Trigger: GGGCGCCTCGGAGATCATGCATGCCCCGCGGTCCAG...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATCTGGACCGCGGGGCATaGATGATCTCCGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYLDRGA*MISEAP
Trigger: GGGCGCCTCGGAGATCATGCATGCCCCGCGGTCCAG...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000359446.10
ENST00000585931.5
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCACGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDARLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATACGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIRLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAAYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCTTTCTCCAGCTGAAGTaGACGTTGGAAGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSFLQLK*TLEGIR
Trigger: TCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAA...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAATTTAACTGCATGTTGTaGTTTTTACCCGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEFNCML*FLPGAL
Trigger: AAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAA...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCGGGAGGGTGAGGACATaGTTGTCAAGCTTCTGTATT +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPGRVRT*LSSFCI
Trigger: AATACAGAAGCTTGACAAGCATGTCCTCACCCTCCC...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGGTACAAAATTCCTCTaGTGGTGTCAGGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGGTKFL*WCQEAS
Trigger: GGAGGCCTCCTGACACCAGCAGAGGAATTTTGTACC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp AGTATCTGGCCTGAGGACATATTTGAAGTGCTCTGCACCAGAGCCTTCCTAAAAGGTACAAAATTCCTCTaGTGGTGTCAGGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SIWPEDIFEVLCTRAFLKGTKFL*WCQEAS
Trigger: GGAGGCCTCCTGACACCAGCAGAGGAATTTTGTACC...TTTTAGGAAGGCTCTGGTGCAGAGCACTTCAAATATGTCCTCAGGCCAGATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp GCGCAGTGTCTGCTAAACGTGTTGGCTGCTGCTCTTATAAAAGCCAGTGCTTACGGGAAGTTCTCCCTTTaGCCACCTGTCATTCAATTG +
Preference number: 4 (lower is better)
Translates to: AQCLLNVLAAALIKASAYGKFSL*PPVIQL
Trigger: CAATTGAATGACAGGTGGGCAAAGGGAGAACTTCCC...GTAAGCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACACTGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp GCGCAGTGTCTGCTAAACGTGTTGGCTGCTGCTCTTATAAAAGCCAGTGCTTACGCAAAGGACACAGCGTaGCGGGTAATAAAGAATGCT +
Preference number: 4 (lower is better)
Translates to: AQCLLNVLAAALIKASAYAKDTA*RVIKNA
Trigger: AGCATTCTTTATTACCCGGCACGCTGTGTCCTTTGC...GTAAGCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACACTGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAGATGCAACTTTCCATTaGTATATATACGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGDATFH*YIYAGH
Trigger: ATGACCAGCGTATATATAGCAATGGAAAGTTGCATC...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATGCACCTGCACGCGGGTaGTCCTTGTCCCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYAPARG*SLSQPQ
Trigger: CTGCGGCTGGGACAAGGAGCACCCGCGTGCAGGTGC...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATGGCTTATTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGCTGTGCTCCAACTCTTaGGCTGTCCCGTCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: MAYYHDQQHGILPSLFLGLCSNS*AVPSRK
Trigger: CTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAG...CCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAATAAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATACTGTGCTCCAACTCTTaGGCTGTCCCGTCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNILCSNS*AVPSRK
Trigger: CTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAG...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGCTGTGCTCCAACTCTTaGGCTGTCCCGTCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLLCSNS*AVPSRK
Trigger: CTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAG...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGCTGTGCTCCAACTCTTaGGCTGTCCCGTCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRLCSNS*AVPSRK
Trigger: CTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAG...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCCAGCTTCCGGCATACTaGTCCCCGGACAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCQLPAY*SPDKPV
Trigger: CACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCTG...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTGCTGGGTGGGCATGGACCCCCGCTATACATAGCAATGTCTATTAAATCACTGCATAATCAGGTCCTCTaGAAGTGGGAGTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: LLGGHGPPLYIAMSIKSLHNQVL*KWESNC
Trigger: ACAGTTGGACTCCCACTTGCAGAGGACCTGATTATG...CAGTGATTTAATAGACATTGCTATGTATAGCGGGGGTCCATGCCCACCCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR GCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGAGCCTCCTTCAGTGTaGTGTTGTTCAGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGEPPSV*CCSGGH
Trigger: GTGACCACCTGAACAACAGCACACTGAAGGAGGCTC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR GCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCTCCCAGCGGCTCTTaGCACCGAGCTCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEAPSGS*HRALYW
Trigger: CCAGTACAGAGCTCGGTGGCAAGAGCCGCTGGGAGC...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR GCA 90 bp GTGAGCCCTGGGTCAACGCCTTGTTCATCCACAGTGTCTCAGCAGGTAGTGTGTCTACCAATTATCAACTaGCATCAACAGAAACCAGGA +
Preference number: 4 (lower is better)
Translates to: VSPGSTPCSSTVSQQVVCLPIIN*HQQKPG
Trigger: TCCTGGTTTCTGTTGATGGCAGTTGATAATTGGTAG...ACACACTACCTGCTGAGACACTGTGGATGAACAAGGCGTTGACCCAGGGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATACTGGACCGCGGGGCATaGATGATCTTGCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNILDRGA*MILPNP
Trigger: GGGATTTGGCAAGATCATGCATGCCCCGCGGTCCAG...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR CCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFSRLRL*FGRLMK
Trigger: CTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGA...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CGCAGGATCCACAACAACAAAAGTGTCAACTTTTTACGGCCCTTTCAAACAGATCTGAAGCGATCCCTCTaGATGAAGGACGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: RRIHNNKSVNFLRPFQTDLKRSL*MKDGAV
Trigger: CACAGCGCCGTCCTTCATCCAGAGGGATCGCTTCAG...ATCTGTTTGAAAGGGCCGTAAAAAGTTGACACTTTTGTTGTTGTGGATCCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGCTGAAGCGATCCCTCTaGATGAAGGACGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLLKRSL*MKDGAV
Trigger: CACAGCGCCGTCCTTCATCCAGAGGGATCGCTTCAG...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGACGGACAGGGAGATGGTaGGAGGAAGATCAATCTCGT +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGRTGRW*EEDQSR
Trigger: ACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCG...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGTATGGTTCGGTTGGGTaGGGCCCTCACGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRYGSVG*GPHGLS
Trigger: CGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATA...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCCAAATATGGTTCGGTTaGGTGGGGCCCTCACGGACT +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSQIWFG*VGPSRT
Trigger: AGTCCGTGAGGGCCCCACCCAACCGAACCATATTTG...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTGCTGCTGGGTGGGCATGGACCCCCGCTATACATAGCAATGTCTATTAAATCAAATCACTGTCAAATATaGTTCGGTTGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LLLGGHGPPLYIAMSIKSNHCQI*FGWVGP
Trigger: GGGCCCCACCCAACCGAACCATATTTGACAGTGATT...TGATTTAATAGACATTGCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCGCTGCTGGGTGGGCATaGACCCCCGCTATACATAGC +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCAAGWA*TPAIHS
Trigger: GCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGC...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATTGCCCGAGTTGCTGCTaGGTGGGCATGGACCCCCGC +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYCPSCC*VGMDPR
Trigger: GCGGGGGTCCATGCCCACCCAGCAGCAACTCGGGCA...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGGAGGCGCCTGGGTGGTaGCCCATCACCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRREAPGW*PITSLY
Trigger: ATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTC...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTGAGGCGCCTGGGTGGTaGCCCATCACCTCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIEAPGW*PITSLY
Trigger: ATACAGCGAGGTGATGGGCCACCACCCAGGCGCCTC...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGAGGAAAGAGGCGCCTaGGTGGTGGCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEEERGA*VVAHHL
Trigger: GAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTC...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAAVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCTCCAGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: LTACCAFYPVLFSHLPPPGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...TGGAGGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGACTCCACTTTATACCTTaGCACACAACACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGLHFIP*HTTQEF
Trigger: AAATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAG...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AGAGCTAGAGCTGTGGGGTGCATCTCCTGCTTCACCAAAACTGCAGGTGAGAACCCACGATCAGCAACATaGCATTCTTCCGTCATTATT +
Preference number: 4 (lower is better)
Translates to: RARAVGCISCFTKTAGENPRSAT*HSSVII
Trigger: AATAATGACGGAAGAATGCCATGTTGCTGATCGTGG...GTTCTCACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATTTAAGGCTGCATAGGTaGGAGTCATGGAATCATCAT +
Preference number: 4 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYLRLHR*ESWNHH
Trigger: ATGATGATTCCATGACTCCCACCTATGCAGCCTTAA...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATGGCTTATTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGTGGCGGTGGTGGAAATaGCGAACGGTAAGCCACGCA +
Preference number: 4 (lower is better)
Translates to: MAYYHDQQHGILPSLFLGWRWWK*RTVSHA
Trigger: TGCGTGGCTTACCGTTCGCCATTTCCACCACCGCCA...CCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAATAAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCAGTCCATCGCTCTGCTaGGCCGGCCTCTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFSPSLC*AGLWEH
Trigger: ATGCTCCCAGAGGCCGGCCCAGCAGAGCGATGGACT...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCTTCCTTTAAAAGCTCTTTCCTAAGCCCCGATGATGGGTTCACTACCTTTGGGTCAAAGACCCTATCATaGGTCAGGGGGCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SSFKSSFLSPDDGFTTFGSKTLS*VRGQGL
Trigger: CAGACCTTGCCCCCTGACCCATGATAGGGTCTTTGA...CCCAAAGGTAGTGAACCCATCATCGGGGCTTAGGAAAGAGCTTTTAAAGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCCATCAACTCCCTGGGTaGGCTTCGGCCCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFHQLPG*ASAPGF
Trigger: GAACCCAGGGGCCGAAGCCCACCCAGGGAGTTGATG...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS-3UTR CCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCCACTTGATAAACGCCTaGTGGAATTGTGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSHLINA*WNCGEK
Trigger: CTTCTCTCCACAATTCCACCAGGCGTTTATCAAGTG...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677744.1
3UTR CAA 72 bp AGAAGCAGAAGGGAACAGACTAGGATCAGACAACTCTaGGGGTTTGGAACAGTCTCTCCAGTTACAGCACAG +
Preference number: 4 (lower is better)
Translates to: RSRREQTRIRQL*GFGTVSPVTAQ
Trigger: CTGTGCTGTAACTGGAGAGACTGTTCCAAACCCCAAGAGTTGTCTGATCCTAGTCTGTTCCCTTCTGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGTCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGSRTLG*VPSAVQ
Trigger: CTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGA...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGTGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQECRCLH*CPSCCW
Trigger: CCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCA...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CATTTTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCTCACTGGAACAAGACTaGATCCAGTCTCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: HFNCMLCFLPGALQSLAPSLEQD*IQSQNL
Trigger: GAGGTTCTGAGACTGGATTCAGTCTTGTTCCAGTGA...GGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGACTGCAGGTGAGAACTaGAATGATGGAATCACTCAC +
Preference number: 4 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQTAGEN*NDGITH
Trigger: GTGAGTGATTCCATCATTTCAGTTCTCACCTGCAGT...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCTCCAAGGCACCTTAGTTGCTaGAAAACTGACATGCAGATC +
Preference number: 4 (lower is better)
Translates to: LTACCAFYPVLFSHLPPPRHLSC*KTDMQI
Trigger: GATCTGCATGTCAGTTTTTCAGCAACTAAGGTGCCT...TGGAGGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGAAAGAGGCAGATACGTaGCAGGTGGAAATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKKEADT*QVEIFF
Trigger: GAAAAAGATTTCCACCTGTCACGTATCTGCCTCTTT...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TTTAAAAATTCGCTTCTGCTCTCTTGGGATTTCTTGTGGCTTGGGTGTGTGTCCGCCCAACAGGAGGTTTaGTGTCACGAACGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: FKNSLLLSWDFLWLGCVSAQQEV*CHERRA
Trigger: AGCTCTACGTTCGTGACATCAAACCTCCTGTTGGGC...GGACACACACCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCGCCCAACAGGAGGTTTaGTGTCACGAACGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSAQQEV*CHERRA
Trigger: AGCTCTACGTTCGTGACATCAAACCTCCTGTTGGGC...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCTCTGTGCTCCGCCTCTaGAACTTTTACACTATACAG +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPSVLRL*NFYTIQ
Trigger: CTGTATAGTGTAAAAGTTTCAGAGGCGGAGCACAGA...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAAACAGGTCTTTGAACTaGGCCTCCTTCAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGNRSLN*ASFSVL
Trigger: CAGCACACTGAAGGAGGCTCAGTTCAAAGACCTGTT...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR TCA 90 bp ACAGACACGTATTCTCCCAAACACTTCCTGATGACTTCAGTGGTGCTGGAGTTTAGCAACGTCTATCAGTaGGCAGTCTGCACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: TDTYSPKHFLMTSVVLEFSNVYQ*AVCTSQ
Trigger: CTGAGAAGTGCAGACTGCTCACTGATAGACGTTGCT...AAACTCCAGCACCACTGAAGTCATCAGGAAGTGTTTGGGAGAATACGTGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCACCCGGAAATGTTCTaGGTTGACAGACCCCTCTTA +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGHPEMF*VDRPLL
Trigger: TAAGAGGGGTCTGTCAACTCAGAACATTTCCGGGTG...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677910.1
CDS-3UTR GCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAACTGCTGCAGGTGCTTaGACTGATGCCCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNITAAGA*TDARVA
Trigger: AGCAACTCGGGCATCAGTGCAAGCACCTGCAGCAGT...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTTGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLICPCVR*CAGDGG
Trigger: TCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTTCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLISAAPV*VAALVM
Trigger: CATCACCAGCGCAGCAACGCACACAGGGGCAGCAGA...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGTCTGCTGCCCCTGTGTaGGTTGCTGCGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQESAAPV*VAALVM
Trigger: CATCACCAGCGCAGCAACGCACACAGGGGCAGCAGA...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRETAVC*PCVRCC
Trigger: GCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTC...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCCACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCTCCACACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LTACCAFYPVLFSHLPPPHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...TGGAGGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTCCCAGGCTTCCTATCTTTGCCTTTGATGGGTACTATTGTGCTCTCTGCATTGCTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FPGFLSLPLMGTIVLSALLKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...CAATGCAGAGAGCACAATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR GCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGGTAGGTTTTGAGCACTaGATTCCTTTAAGAATGCTA +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRVGFEH*IPLRML
Trigger: TAGCATTCTTAAAGGAATGCAGTGCTCAAAACCTAC...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGTGCTCTTCAGTCACTTaGCCCCTCCACTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGCSSVT*PLHCSL
Trigger: CAGAGAACAGTGGAGGGGGCAAGTGACTGAAGAGCA...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCCCCAAGCCAATCTCTaGCCTGAGAGCTGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRPQANL*PESWCL
Trigger: GAGACACCAGCTCTCAGGGCAGAGATTGGCTTGGGG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATGGCTTATTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGCGGGCTCCTCATCTTTaGCTGACAGAGGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: MAYYHDQQHGILPSLFLGRAPHL*LTEEER
Trigger: CCTCTCTTCCTCTGTCAGGCAAAGATGAGGAGCCCG...CCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAATAAGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGCTTCCAAGTGGGGTGCATCTCCTaGTTCACCAAAACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LPRSATWHSSVIISRGFQVGCIS*FTKTAG
Trigger: ACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCAC...TTGGAAGCCCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCGCTAGAGCTGTGGGGTaGATCTCCTGCTTCACCAAA +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSARAVG*ISCFTK
Trigger: TTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGC...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGAATTAGTGAATGGAAATaGAGTCCTCACGATAAATCT +
Preference number: 4 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGISEWK*SPHDKS
Trigger: AGATTTATCGTGAGGACTGCATTTCCATTCACTAAT...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp AGAGCTAGAGCTGTGGGGTGCATCTCCTGCTTCACCAAAACTGCAGGTGAGAACATATTTGAAGTGCTCTaGACCAGAGCCTTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: RARAVGCISCFTKTAGENIFEVL*TRAFLK
Trigger: TTTTAGGAAGGCTCTGGTGCAGAGCACTTCAAATAT...GTTCTCACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGCCGGGCCGGGCTGGGTaGTTGTCGCTTCCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEPGRAG*LSLPVY
Trigger: ATAAACAGGAAGCGACAAGCACCCAGCCCGGCCCGG...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399848.7
ENST00000677055.1
CDS-3UTR GCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGCACGTTAGGCTCGCGTaGTTCTCCCCTGCAGATCCG +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEHVRLA*FSPADP
Trigger: CGGATCTGCAGGGGAGAAGCACGCGAGCCTAACGTG...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS-3UTR GCA 90 bp AAACAAAACTCCAAAGCAACAAACTGTGTACTCATGCATAACACCTCCAACAGGCCCAACGGCCTGACCTaGTTCAACAGCATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KQNSKATNCVLMHNTSNRPNGLT*FNSIQH
Trigger: GTGCTGGATGCTGTTGAAGCAGGTCAGGCCGTTGGG...CCTGTTGGAGGTGTTATGCATGAGTACACAGTTTGTTGCTTTGGAGTTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCCGGACAGGGAGATGGTaGGAGGAAGATCAATCTCGT +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSRTGRW*EEDQSR
Trigger: ACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCG...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTCCCCTGGTAAGGAGGTaGCTCTTCACCGTCGGACAG +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFPLVRR*LFTVGQ
Trigger: CTGTCCGACGGTGAAGAGCCACCTCCTTACCAGGGG...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGCCCCTGGTAAGGAGGTaGCTCTTCACCGTCGGACAG +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEPLVRR*LFTVGQ
Trigger: CTGTCCGACGGTGAAGAGCCACCTCCTTACCAGGGG...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTTATGGTTCGGTTGGGTaGGGCCCTCACGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFYGSVG*GPHGLS
Trigger: CGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATA...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTATGGTTCGGTTGGGTaGGGCCCTCACGGACTCTCG +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFYGSVG*GPHGLS
Trigger: CGAGAGTCCGTGAGGGCCCCACCCAACCGAACCATA...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACCAAATATGGTTCGGTTaGGTGGGGCCCTCACGGACT +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHQIWFG*VGPSRT
Trigger: AGTCCGTGAGGGCCCCACCCAACCGAACCATATTTG...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCGCTGCTGGGTGGGCATaGACCCCCGCTATACATAGC +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFAAGWA*TPAIHS
Trigger: GCTATGTATAGCGGGGGTCCATGCCCACCCAGCAGC...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCCGAGTTGCTGCTGGGTaGGCATGGACCCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFRVAAG*AWTPAI
Trigger: TATAGCGGGGGTCCATGCCCACCCAGCAGCAACTCG...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAATCAGACCAGGTTCCTTTCTTGGATGCTTCTaGGGACCACTCCAGGATATT +
Preference number: 4 (lower is better)
Translates to: LGFFLQLKCTLEGIRPGSFLGCF*GPLQDI
Trigger: AATATCCTGGAGTGGTCCCCAGAAGCATCCAAGAAA...GGAACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAAACAAAATTCCTCTGCTaGTGTCAGGAGGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQTKFLC*CQEASP
Trigger: GGGGGAGGCCTCCTGACACCAGCAGAGGAATTTTGT...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAACAAAATTCCTCTGCTaGTGTCAGGAGGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNITKFLC*CQEASP
Trigger: GGGGGAGGCCTCCTGACACCAGCAGAGGAATTTTGT...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGAGAGGTCCTTCACTTaGCTGGCTGACAGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLERSFT*LADSQV
Trigger: GACTTGGCTGTCAGCCAGCCAAGTGAAGGACCTCTC...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCGGGAGTTCTCGGAAATaGCCCAACAGGAGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTGSSRK*PNRRFD
Trigger: ATCAAACCTCCTGTTGGGCCATTTCCGAGAACTCCC...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACGCTGTCACACAGGGATaGCAAGGGGCTTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHAVTQG*QGAFAP
Trigger: AGGAGCAAAAGCCCCTTGCCATCCCTGTGTGACAGC...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS-3UTR TCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATATCTGCATTGTTCTGCTaGAACTGCAGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNISALFC*NCSLLP
Trigger: GGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGA...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAATCAGACCAGGTTCCTCCTATCTTTGCCTTTaGTGGGTACTATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: LGFFLQLKCTLEGIRPGSSYLCL*WVLLCS
Trigger: AGAGCACAATAGTACCCATCAAAGGCAAAGATAGGA...GGAACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR TCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCTCCTATCTTTGCCTTTaGTGGGTACTATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSSYLCL*WVLLCS
Trigger: AGAGCACAATAGTACCCATCAAAGGCAAAGATAGGA...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTCGATGCACTGCTATTTaGTGCAAACTCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCRCTAI*CKLLQQ
Trigger: TTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCG...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAATCTGTGGGCACACCTaGCCAAGAATCCACTGCAAG +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAICGHT*PRIHCK
Trigger: CTTGCAGTGGATTCTTGGTCAGGTGTGCCCACAGAT...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCAAGCCACGCAGCTGCTaGGAACTAGCATTTAGGATC +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSKPRSC*ELAFRI
Trigger: GATCCTAAATGCTAGTTCTCAGCAGCTGCGTGGCTT...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGAAGCCACGCAGCTGCTaGGAACTAGCATTTAGGATC +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGKPRSC*ELAFRI
Trigger: GATCCTAAATGCTAGTTCTCAGCAGCTGCGTGGCTT...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAACTGTTCACATCTCTGTaGTCTGTAGCGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQLFTSL*SVAVLA
Trigger: TGCCAGCACCGCTACAGATCACAGAGATGTGAACAG...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTTCTGTGCTCCGCCTCTaGAACTTTTACACTATACAG +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCSVLRL*NFYTIQ
Trigger: CTGTATAGTGTAAAAGTTTCAGAGGCGGAGCACAGA...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCAAAGCATTTGTGGCCTaGAAACCAGCTTCCGGCATA +
Preference number: 4 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTKAFVA*KPASGI
Trigger: TATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTT...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAAAGCATTTGTGGCCTaGAAACCAGCTTCCGGCATA +
Preference number: 4 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHKAFVA*KPASGI
Trigger: TATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTT...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAATCAGACCATTAAGAACAGGTCTTTaGACTGAGCCTCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SLLGFFLQLKCTLEGIRPLRTGL*TEPPSV
Trigger: CACTGAAGGAGGCTCAGTTCAAAGACCTGTTCTTAA...TGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR GCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTCGGTTGAGTTCCATCTaGTGTTCAGGGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFRLSSI*CSGSRS
Trigger: GCTCCGGGACCCTGAACAGCAGATGGAACTCAACCG...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGAAACTGCAGTCTGCTaGCCCTGTGTGCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEETAVC*PCVRCC
Trigger: GCAGCAACGCACACAGGGGCAGCAGACTGCAGTTTC...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGCTGAAACTGCAGTCTaGTGCCCCTGTGTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFAETAV*CPCVRC
Trigger: GCAACGCACACAGGGGCAGCAGACTGCAGTTTCAGC...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTTTTCTCCAGCTGAAGTaGACGTTGGAAGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCFLQLK*TLEGIR
Trigger: TCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAA...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCCAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AGAGCTAGAGCTGTGGGGTGCATCTCCTGCTTCACCAAAACTGCAGGTGAGAACTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RARAVGCISCFTKTAGENFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...GTTCTCACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATATGCTCTTCAGTCACTTaGCCCCTCCACTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNICSSVT*PLHCSL
Trigger: CAGAGAACAGTGGAGGGGGCAAGTGACTGAAGAGCA...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTAACTGCATGTTGTaGTTTTTACCCGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKFNCML*FLPGAL
Trigger: AAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAA...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CGCAGGATCCACAACAACAAAAGTGTCAACTTTTTACGGCCCTTTCAAACAGATGTGGGGTGCATCTCCTaGTTCACCAAAACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: RRIHNNKSVNFLRPFQTDVGCIS*FTKTAG
Trigger: ACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCAC...ATCTGTTTGAAAGGGCCGTAAAAAGTTGACACTTTTGTTGTTGTGGATCCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTTTGGCCCCTATTTCCTaGCTCATAAGTTTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCLAPIS*LISLSQ
Trigger: TTGGCTCAAACTTATGAGGCAGGAAATAGGGGCCAA...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGTATTTGAAGATAAATaGAGAGGTCACAATCAGACA +
Preference number: 4 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEVFEDK*RGHNQT
Trigger: TGTCTGATTGTGACCTCTGCATTTATCTTCAAATAC...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCCAAAATTCCACGAACTaGTCTTATGGACAACACTCG +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPQNSTN*SYGQHS
Trigger: CGAGTGTTGTCCATAAGAGCAGTTCGTGGAATTTTG...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATCCCCGGACAAGCCTGTaGTCCAACTCTTGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDPRTSL*SNSCAV
Trigger: GACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGG...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCATAATCAGGTCCTCTaGAAGTGGGAGTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGHNQVL*KWESNC
Trigger: ACAGTTGGACTCCCACTTGCAGAGGACCTGATTATG...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR GCA 90 bp AATTCCCCCTATAGGATTCATTTAAAATCCACCCTCACCTCCACCTCCACATTATTTGGGGACTTCCTGTaGAGCTCTGAACCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: NSPYRIHLKSTLTSTSTLFGDFL*SSEPCC
Trigger: GCAACAGGGTTCAGAGCTGCACAGGAAGTCCCCAAA...TAATGTGGAGGTGGAGGTGAGGGTGGATTTTAAATGAATCCTATAGGGGGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCACGGACAGGGAGATGGTaGGAGGAAGATCAATCTCGT +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDARTGRW*EEDQSR
Trigger: ACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCG...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACCGGACAGGGAGATGGTaGGAGGAAGATCAATCTCGT +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHRTGRW*EEDQSR
Trigger: ACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCG...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATGAGGAAAGAGGCGCCTaGGTGGTGGCCCATCACCTC +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYEERGA*VVAHHL
Trigger: GAGGTGATGGGCCACCACCCAGGCGCCTCTTTCCTC...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPAKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTAAAAATTCGCTTCTGCTCTCTTGGGATTTCTTGTGGCTTGGGTGTGTGTCCAAGAAATTGCACTGCTaGAGGATGAGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: FKNSLLLSWDFLWLGCVSKKLHC*RMRAAL
Trigger: CAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTT...GGACACACACCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCGAAGAGAGGCTAATCTaGAGAGCCAGTGAACCTTCA +
Preference number: 4 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTEERLI*RASEPS
Trigger: TGAAGGTTCACTGGCTCTCCAGATTAGCCTCTCTTC...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GAACAAGGGACAAAAGTCAGCGGTATGCCCAGGAGTGTTCATTCCCACCAAATGCACTCGTTACTAAACTaGACCCATGGGTTCTATAAG +
Preference number: 4 (lower is better)
Translates to: EQGTKVSGMPRSVHSHQMHSLLN*THGFYK
Trigger: CTTATAGAACCCATGGGTCCAGTTTAGTAACGAGTG...CATTTGGTGGGAATGAACACTCCTGGGCATACCGCTGACTTTTGTCCCTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTTGGCGGTGGTGGAAATaGCGAACGGTAAGCCACGCA +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFWRWWK*RTVSHA
Trigger: TGCGTGGCTTACCGTTCGCCATTTCCACCACCGCCA...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCACACGAACTGCTCTTATaGACAACACTCGAAAGGATG +
Preference number: 4 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPHELLL*TTLERM
Trigger: CATCCTTTCGAGTGTTGTCCATAAGAGCAGTTCGTG...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAATAAGCTGATAATATaGGTCAGATGGGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRNKLII*VRWAKF
Trigger: GAATTTTGCCCATCTGACCCATATTATCAGCTTATT...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCACGATGATGATGATTTaGGCGAACTCCAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSTMMMI*ANSSSE
Trigger: CTCGGAGCTGGAGTTCGCCCAAATCATCATCATCGT...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCCAGGTCCTCTGCAAGTaGGAGTCCAACTGTGACGCA +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCQVLCK*ESNCDA
Trigger: TGCGTCACAGTTGGACTCCCACTTGCAGAGGACCTG...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR CCA 90 bp AAACAAAACTCCAAAGCAACAAACTGTGTACTCATGCATAACACCTCCAACAGGGCAATGTCACAGAAATaGCCGCCCACTGGCCACGAA +
Preference number: 4 (lower is better)
Translates to: KQNSKATNCVLMHNTSNRAMSQK*PPTGHE
Trigger: TTCGTGGCCAGTGGGCGGCCATTTCTGTGACATTGC...CCTGTTGGAGGTGTTATGCATGAGTACACAGTTTGTTGCTTTGGAGTTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
3UTR CAA 72 bp AATCAGACCAGGTTCCCAGGCTTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTCTCTGCATTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: NQTRFPGFLSLP*MGTIVLSALFC
Trigger: GCAGAACAATGCAGAGAGCACAATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGGGAACCTGGTCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR TCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATTGCAGGTGCTTGCACTaGTGCCCGAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYCRCLH*CPSCCW
Trigger: CCAGCAGCAACTCGGGCATCAGTGCAAGCACCTGCA...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGTCTGCATTGTTCTGCTaGAACTGCAGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRSALFC*NCSLLP
Trigger: GGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGA...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCTCTGCATTGTTCTGCTaGAACTGCAGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFSALFC*NCSLLP
Trigger: GGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGA...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GTTCCCAGGCTTCCTATCTTTGCCTTTGATGGGTACTATTGTGCTCTCTGCATTCGATGCACTGCTATTTaGTGCAAACTCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: VPRLPIFAFDGYYCALCIRCTAI*CKLLQQ
Trigger: TTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCG...AATGCAGAGAGCACAATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR TCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGTGCACTGCTGGAGGATaGGGGCAGCACTGCATGATA +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRCTAGG*GQHCMI
Trigger: TATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCA...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCGCAATGGGAATATACTaGGGAGTCACATATTTCAAC +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPAMGIY*GVTYFN
Trigger: GTTGAAATATGTGACTCCTCAGTATATTCCCATTGC...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTCCACTGTTCTCTaGCTGTCCAGTTCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFPSTVL*LSSSCL
Trigger: AAGGCAAGAACTGGACAGTCAGAGAACAGTGGAGGG...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCCCTCCACTGTTCTCTaGCTGTCCAGTTCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRPSTVL*LSSSCL
Trigger: AAGGCAAGAACTGGACAGTCAGAGAACAGTGGAGGG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCATTTACTTATTCCTCTaGCACAGTTTCTGCAACAAC +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSIYLFL*HSFCNN
Trigger: GTTGTTGCAGAAACTGTGTCAGAGGAATAAGTAAAT...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCATTTGGGTCCGTATTATaGTGGGACATGAATGGGAAT +
Preference number: 4 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPFGSVL*WDMNGN
Trigger: ATTCCCATTCATGTCCCATCATAATACGGACCCAAA...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACTTAAGAACAGGTCTTTaGACTGAGCCTCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHLRTGL*TEPPSV
Trigger: CACTGAAGGAGGCTCAGTTCAAAGACCTGTTCTTAA...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR TCA 90 bp TTTTATGGAAACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGACACCCGGAAATGTTCTaGGTTGACAGACCCCTCTTA +
Preference number: 4 (lower is better)
Translates to: FYGNISRKSQAAQWRITGHPEMF*VDRPLL
Trigger: TAAGAGGGGTCTGTCAACTCAGAACATTTCCGGGTG...TCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGTTTCCATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGACTGCTGCAGGTGCTTaGACTGATGCCCGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQETAAGA*TDARVA
Trigger: AGCAACTCGGGCATCAGTGCAAGCACCTGCAGCAGT...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATTGCCCCTGTGTGCGTTaGTGCGCTGGTGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYCPCVR*CAGDGG
Trigger: TCCTCCATCACCAGCGCAGCAACGCACACAGGGGCA...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AGTATCTGGCCTGAGGACATATTTGAAGTGCTCTGCACCAGAGCCTTCCTAAAACACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SIWPEDIFEVLCTRAFLKHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...TTTTAGGAAGGCTCTGGTGCAGAGCACTTCAAATATGTCCTCAGGCCAGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACCACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GTTCCCAGGCTTCCTATCTTTGCCTTTGATGGGTACTATTGTGCTCTCTGCATTATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: VPRLPIFAFDGYYCALCIISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...AATGCAGAGAGCACAATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR GCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCTTTAACTGCATGTTGTaGTTTTTACCCGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSFNCML*FLPGAL
Trigger: AAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAA...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAAAACGTGTTGGCTGCTaGTCTTATAAAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGKRVGC*SYKSQC
Trigger: GCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTT...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGGGGAGGGTGAGGACATaGTTGTCAAGCTTCTGTATT +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGGRVRT*LSSFCI
Trigger: AATACAGAAGCTTGACAAGCATGTCCTCACCCTCCC...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGCTTCCAAAGGACATATTTGAAGTaGTCTGCACCAGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPRSATWHSSVIISRGFQRTYLK*SAPEPS
Trigger: GGAAGGCTCTGGTGCAGAGCACTTCAAATATGTCCT...TTGGAAGCCCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGAGCCTCCTTCAGTGTaGTGTTGTTCAGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRREPPSV*CCSGGH
Trigger: GTGACCACCTGAACAACAGCACACTGAAGGAGGCTC...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR GCA 90 bp GAATTACAGGAACAGAAGAAGTGGTGTGAAGTCTGTCGGTCTCTTCCCTGGTTCAAACCCGAAAGAGCATaGATCATCCATAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ELQEQKKWCEVCRSLPWFKPERA*IIHSSS
Trigger: AGAACTGCTATGGATGATGCATGCTCTTTCGGGTTT...GAACCAGGGAAGAGACCGACAGACTTCACACCACTTCTTCTGTTCCTGTAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp GAATTACAGGAACAGAAGAAGTGGTGTGAAGTCTGTCGGTCTCTTCCCTGGTTCCAAACTGTGTACTCATaGATAACACCTCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: ELQEQKKWCEVCRSLPWFQTVYS*ITPPTG
Trigger: TCCTGTTGGAGGTGTTATGCATGAGTACACAGTTTG...GAACCAGGGAAGAGACCGACAGACTTCACACCACTTCTTCTGTTCCTGTAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp TTCCTTGGAGGTGGGTTGGCTACTCTACTGTATAGTACAACAAGTAGAACGAAATCAGCAGGTAGTGTGTaGCTGGCACAAAGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: FLGGGLATLLYSTTSRTKSAGSV*LAQSWH
Trigger: ATGCCAACTTTGTGCCAGGCACACACTACCTGCTGA...TTTCGTTCTACTTGTTGTACTATACAGTAGAGTAGCCAACCCACCTCCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCGGGAGTTTCTGTGCGTaGTACGTGTGCATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFGSFCA*YVCIFP
Trigger: GGGGAAAATGCACACGTAGCACGCACAGAAACTCCC...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR CCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCGGACAGGGAGATGGTaGGAGGAAGATCAATCTCGT +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRRTGRW*EEDQSR
Trigger: ACGAGATTGATCTTCCTCCCACCATCTCCCTGTCCG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRRRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCCGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCRRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGCAAATATGGTTCGGTTaGGTGGGGCCCTCACGGACT +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEQIWFG*VGPSRT
Trigger: AGTCCGTGAGGGCCCCACCCAACCGAACCATATTTG...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGCAAATATGGTTCGGTTaGGTGGGGCCCTCACGGACT +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRQIWFG*VGPSRT
Trigger: AGTCCGTGAGGGCCCCACCCAACCGAACCATATTTG...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGAATCACTGTCAAATATaGTTCGGTTGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLNHCQI*FGWVGP
Trigger: GGGCCCCACCCAACCGAACCATATTTGACAGTGATT...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAATCACTGTCAAATATaGTTCGGTTGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDANHCQI*FGWVGP
Trigger: GGGCCCCACCCAACCGAACCATATTTGACAGTGATT...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATCGAGTTGCTGCTGGGTaGGCATGGACCCCCGCTATA +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYRVAAG*AWTPAI
Trigger: TATAGCGGGGGTCCATGCCCACCCAGCAGCAACTCG...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 4 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCCTCCACTTTATACCTTaGCACACAACACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPLHFIP*HTTQEF
Trigger: AAATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAG...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACTTTCTTGGATGCTTCTaGGGACCACTCCAGGATATT +
Preference number: 4 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHFLGCF*GPLQDI
Trigger: AATATCCTGGAGTGGTCCCCAGAAGCATCCAAGAAA...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAATCAGACCACCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: SLLGFFLQLKCTLEGIRPPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...TGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPATSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCTACAATAACCCACAATaGCTTATTACCACGATCAGC +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSYNNPQ*LITTIS
Trigger: GCTGATCGTGGTAATAAGCCATTGTGGGTTATTGTA...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCACAACTCTTGGGGTTTaGAACAGTCTCTCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGTTLGV*NSLSSY
Trigger: GTAACTGGAGAGACTGTTCCAAACCCCAAGAGTTGT...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTGTTGGACTAGTTCTGTaGATGTTACTGTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCVGLVL*MLLCAK
Trigger: CTTTGCACACAGTAACATCCACAGAACTAGTCCAAC...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCTCTCCTTTTAAGAGTTaGACTAGTTCTGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSSPFKS*TSSVDV
Trigger: AACATCCACAGAACTAGTCCAACTCTTAAAAGGAGA...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATTGGGGAGGGTCCTTCTaGCCCCAAGCCAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYWGGSF*PQANLC
Trigger: GCAGAGATTGGCTTGGGGCCAGAAGGACCCTCCCCA...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCGCCTCCGCATCTGTaGGCACACCTGACCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFSPPHL*AHLTKN
Trigger: ATTCTTGGTCAGGTGTGCCCACAGATGCGGAGGCGA...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTCACTCGTTACTAAACTaGACCCATGGGTTCTATAAG +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCHSLLN*THGFYK
Trigger: CTTATAGAACCCATGGGTCCAGTTTAGTAACGAGTG...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCAGGCAGGGATTTGGATaGATTCTTCTAGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTRQGFG*ILLGQR
Trigger: TCTCTGACCTAGAAGAATCCATCCAAATCCCTGCCT...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp ATGGCTTATTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGAGAGAAGGGAACTGTTaGTTCAGAGAGGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: MAYYHDQQHGILPSLFLGREGNC*FREEGR
Trigger: CCTGCCTTCCTCTCTGAACCAACAGTTCCCTTCTCT...CCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAATAAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTAGAAGAGCCGCTGGATaGAAGATAGAGGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIRRAAG*KIEDGP
Trigger: GGGGCCATCCTCTATCTTCCATCCAGCGGCTCTTCT...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTGTGGAGCATGTTCGTaGCATGAAGGCTTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCCGACS*HEGLAP
Trigger: TGGAGCCAAGCCTTCATGCCACGAACATGCTCCACA...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCCTAGCATTTAGGATCTaGGCTGGAAGCAACATTTTT +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSLAFRI*AGSNIF
Trigger: AAAAATGTTGCTTCCAGCCCAGATCCTAAATGCTAG...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCCAGGAGGGGGCGGCTTaGTTCCTATATCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFQEGAA*FLYLLN
Trigger: GTTCAGCAGATATAGGAACCAAGCCGCCCCCTCCTG...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTCTACTGTTACTTCATTaGCTCCACAGCTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCLLLLH*LHSFSL
Trigger: CAAACTGAAGCTGTGGAGCCAATGAAGTAACAGTAG...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAGGGAGTTCTCGGAAATaGCCCAACAGGAGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIGSSRK*PNRRFD
Trigger: ATCAAACCTCCTGTTGGGCCATTTCCGAGAACTCCC...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CGGATACTTTTTAATACATCTAGTCTAAAACTTACAGGAAGGCATCCTAGCACCCAGGTCCTCTGCAAGTaGGAGTCCAACTGTGACGCA +
Preference number: 4 (lower is better)
Translates to: RILFNTSSLKLTGRHPSTQVLCK*ESNCDA
Trigger: TGCGTCACAGTTGGACTCCCACTTGCAGAGGACCTG...GGTGCTAGGATGCCTTCCTGTAAGTTTTAGACTAGATGTATTAAAAAGTATCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAACGATGATGATGATTTaGGCGAACTCCAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDATMMMI*ANSSSA
Trigger: TGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGT...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585931.5
ENST00000677744.1
ENST00000678556.1
CDS-3UTR CCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACACGATGATGATGATTTaGGCGAACTCCAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHTMMMI*ANSSSA
Trigger: TGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGT...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585931.5
ENST00000677744.1
ENST00000678556.1
CDS-3UTR CCA 90 bp AAAAGCTACCCTACAGAAATACCCAGTTTTTGGCGTCACCTGCTGGCTTTATCTTCCCTTGATCTCTGCTaGAAGCTTTCAGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: KSYPTEIPSFWRHLLALSSLDLC*KLSVWK
Trigger: CTTCCACACTGAAAGCTTCCAGCAGAGATCAAGGGA...AGATAAAGCCAGCAGGTGACGCCAAAAACTGGGTATTTCTGTAGGGTAGCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp AAAGCAACAAACTGTGTACTCATGCATAACACCTCCAACAGGAACAAACTAATTACGAGCCCGTCCAGCTaGAGTGGCATCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: KATNCVLMHNTSNRNKLITSPSS*SGISSL
Trigger: AAGTGAGGAGATGCCACTCCAGCTGGACGGGCTCGT...AATTAGTTTGTTCCTGTTGGAGGTGTTATGCATGAGTACACAGTTTGTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp TCTTCCTTTAAAAGCTCTTTCCTAAGCCCCGATGATGGGTTCACTACCTTTGGGTCCCAAGCTGCACAGTaGAGAATTACAGGAACAGAA +
Preference number: 4 (lower is better)
Translates to: SSFKSSFLSPDDGFTTFGSQAAQ*RITGTE
Trigger: TTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGA...CCCAAAGGTAGTGAACCCATCATCGGGGCTTAGGAAAGAGCTTTTAAAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGAACAGAGCACTCCCTaGAGAGGCCCCCATTTAGCT +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFEQSTP*RGPHLA
Trigger: AGCTAAATGGGGGCCTCTCCAGGGAGTGCTCTGTTC...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678400.1
CDS-3UTR TCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCACGGACTCTCGGTTaGGTTCCATCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFSRTLG*VPSAVQ
Trigger: CTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGA...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGTCTGCATTGTTCTGCTaGAACTGCAGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRSALFC*NCSLLP
Trigger: GGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGA...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACTCCTATCTTTGCCTTTaGTGGGTACTATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHSYLCL*WVLLCS
Trigger: AGAGCACAATAGTACCCATCAAAGGCAAAGATAGGA...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCTCCTATCTTTGCCTTTaGTGGGTACTATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGSYLCL*WVLLCS
Trigger: AGAGCACAATAGTACCCATCAAAGGCAAAGATAGGA...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCGCAGCCCTGCAGAACTaGACTAAGCTGTCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFAALQN*TKLSRK
Trigger: TTTCCTCGACAGCTTAGTTCAGTTCTGCAGGGCTGC...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAAGTTGTAAGCATGAGCTaGCAACTGGTGCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQVVSMS*QLVPVF
Trigger: AAACACAGGCACCAGTTGTCAGCTCATGCTTACAAC...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTAAAAATTCGCTTCTGCTCTCTTGGGATTTCTTGTGGCTTGGGTGTGTGTCCAGGCACCTTAGTTGCTaGAAAACTGACATGCAGATC +
Preference number: 4 (lower is better)
Translates to: FKNSLLLSWDFLWLGCVSRHLSC*KTDMQI
Trigger: GATCTGCATGTCAGTTTTTCAGCAACTAAGGTGCCT...GGACACACACCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAAAAGCATTTGTGGCCTaGAAACCAGCTTCCGGCATA +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIKAFVA*KPASGI
Trigger: TATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTT...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGAACAGGTCTTTGAACTaGGCCTCCTTCAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRNRSLN*ASFSVL
Trigger: CAGCACACTGAAGGAGGCTCAGTTCAAAGACCTGTT...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR TCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCACACGAACGTAGAGCTTaGACCGCTGCCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSHERRA*TAAHHP
Trigger: AGGATGGTGGGCAGCGGTTCAAGCTCTACGTTCGTG...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679091.1
CDS-3UTR GCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCCTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCLKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGCTTCCAAGGTTTGGTAGAATCCTaGGGGAATTTGGGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: LPRSATWHSSVIISRGFQGLVES*GNLGRF
Trigger: AAACCTACCCAAATTCCCGCAGGATTCTACCAAACC...TTGGAAGCCCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCGTGCTTTTTACCCGGTaGTCTTCAGTCACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFVLFTR*SSVTCP
Trigger: GGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCAC...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGTCTTATAAAAGCCAGTaGTTACATCTGCAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPASYKSQ*LHLQKK
Trigger: TTTCTTCTGCAGATGTAAGCACTGGCTTTTATAAGA...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATGGCTTATTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGAATTCACAAGTCTCTaGTCTGAGCCCCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: MAYYHDQQHGILPSLFLGEFTSL*SEPLLE
Trigger: CTCAAGAAGGGGCTCAGAGCAGAGACTTGTGAATTC...CCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAATAAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCACTGAACAAAGTCTTCTaGTGCAGGCTGATTTACTTA +
Preference number: 4 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPLNKVF*CRLIYL
Trigger: TAAGTAAATCAGCCTGCAGCAGAAGACTTTGTTCAG...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACCAACACTCGAAAGGATaGCCACACCCAAGATTCAAC +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHQHSKG*PHPRFN
Trigger: GTTGAATCTTGGGTGTGGGCATCCTTTCGAGTGTTG...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TACTCTGAGCTGCCTGTTTATAGCCATGTATTTATGTACAACATTTGCATGACACAGGCAGCTCAGAGCTaGAGTTATAGCTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: YSELPVYSHVFMYNICMTQAAQS*SYSWHG
Trigger: CCCATGCCAGCTATAACTGCAGCTCTGAGCTGCCTG...TGTCATGCAAATGTTGTACATAAATACATGGCTATAAACAGGCAGCTCAGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGCGTCGGACAGGGAGATaGTGGGAGGAAGATCAATCT +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQERRTGR*WEEDQS
Trigger: AGATTGATCTTCCTCCCACCATCTCCCTGTCCGACG...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGAATCACTGTCAAATATaGTTCGGTTGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRNHCQI*FGWVGP
Trigger: GGGCCCCACCCAACCGAACCATATTTGACAGTGATT...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCCCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 4 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 4 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACCCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGAAGAAATTGCACTGCTaGAGGATGAGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRKKLHC*RMRAAL
Trigger: CAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTT...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCATACAATAACCCACAATaGCTTATTACCACGATCAGC +
Preference number: 4 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPYNNPQ*LITTIS
Trigger: GCTGATCGTGGTAATAAGCCATTGTGGGTTATTGTA...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGGGATCAGACAACTCTTaGGGTTTGGAACAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRGSDNS*GLEQSL
Trigger: GAGAGACTGTTCCAAACCCCAAGAGTTGTCTGATCC...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGAAGAGAGGCTAATCTaGAGAGCCAGTGAACCTTCA +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLEERLI*RASEPS
Trigger: TGAAGGTTCACTGGCTCTCCAGATTAGCCTCTCTTC...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCATTGTGTTCTTATAGATaGGATTCAAGATGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPLCSYR*DSRCLG
Trigger: CCCAAGGCATCTTGAATCCCATCTATAAGAACACAA...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCAAAAAGAAGAGCCGCTaGATGGAAGATAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSKKKSR*MEDRGW
Trigger: CCATCCTCTATCTTCCATCCAGCGGCTCTTCTTTTT...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCTACTGTTACTTCATTaGCTCCACAGCTTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGLLLLH*LHSFSL
Trigger: CAAACTGAAGCTGTGGAGCCAATGAAGTAACAGTAG...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAACCGAGTTTGCTTTTTaGGTCCGTATTATGATGGGA +
Preference number: 4 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGTEFAF*VRIMMG
Trigger: TCCCATCATAATACGGACCCAAAAAGCAAACTCGGT...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGCTCGCTCTTCCCTCTTaGCTCTCCCATTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRLALPS*LSHSFP
Trigger: AGGGAATGAATGGGAGAGCCAAGAGGGAAGAGCGAG...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR CCA 90 bp TACTCTGAGCTGCCTGTTTATAGCCATGTATTTATGTACAACATTTGCATGACAGTTTGGCCTCACACCTaGACGTGTCACACACACAGG +
Preference number: 4 (lower is better)
Translates to: YSELPVYSHVFMYNICMTVWPHT*TCHTHR
Trigger: CCTGTGTGTGTGACACGTCCAGGTGTGAGGCCAAAC...TGTCATGCAAATGTTGTACATAAATACATGGCTATAAACAGGCAGCTCAGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp AAAAGCTACCCTACAGAAATACCCAGTTTTTGGCGTCACCTGCTGGCTTTATCTCCATTTAGAAGCTGGTaGAGAAGCCCTAAGAACGAA +
Preference number: 4 (lower is better)
Translates to: KSYPTEIPSFWRHLLALSPFRSW*RSPKNE
Trigger: TTCGTTCTTAGGGCTTCTCCACCAGCTTCTAAATGG...AGATAAAGCCAGCAGGTGACGCCAAAAACTGGGTATTTCTGTAGGGTAGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACACGATGATGATGATTTaGGCGAACTCCAGCTCCGTA +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHTMMMI*ANSSSV
Trigger: TACGGAGCTGGAGTTCGCCCAAATCATCATCATCGT...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678400.1
CDS-3UTR TCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCTGCATTGTTCTGCTaGAACTGCAGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDSALFC*NCSLLP
Trigger: GGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGA...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGTCCTATCTTTGCCTTTaGTGGGTACTATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGSYLCL*WVLLCS
Trigger: AGAGCACAATAGTACCCATCAAAGGCAAAGATAGGA...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATGCTCATCTTGTTATGTaGAGAGGCCACAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDAHLVM*RGHRGP
Trigger: TGGGCCTCTGTGGCCTCTTCACATAACAAGATGAGC...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGTTGTAAGCATGAGCTaGCAACTGGTGCCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRVVSMS*QLVPVF
Trigger: AAACACAGGCACCAGTTGTCAGCTCATGCTTACAAC...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TCAAAAATTACTACTCTAAGAGGGTGTGATCTGTCACTGAGAAAAGAGCCTCCTCATCTCCTCACTTTATaGAAGCCCAAGCCTTCATCC +
Preference number: 4 (lower is better)
Translates to: SKITTLRGCDLSLRKEPPHLLTL*KPKPSS
Trigger: GGATGAAGGCTTGGGCTTTCATAAAGTGAGGAGATG...AGGAGGCTCTTTTCTCAGTGACAGATCACACCCTCTTAGAGTAGTAATTTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGTTTCTCCAGCTGAAGTaGACGTTGGAAGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLFLQLK*TLEGIR
Trigger: TCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAA...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTTTCTCCAGCTGAAGTaGACGTTGGAAGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHFLQLK*TLEGIR
Trigger: TCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAA...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCACACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGCACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATACACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CGCAGGATCCACAACAACAAAAGTGTCAACTTTTTACGGCCCTTTCAAACAGATATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: RRIHNNKSVNFLRPFQTDISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...ATCTGTTTGAAAGGGCCGTAAAAAGTTGACACTTTTGTTGTTGTGGATCCTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCTTCAGCGATGCACTaGTATTTGATGCAAACTCCT +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLASAMH*YLMQTP
Trigger: AGGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGC...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAGCTAAACGTGTTGGCTaGTGCTCTTATAAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAAKRVG*CSYKSQ
Trigger: CTGGCTTTTATAAGAGCAGCAGCCAACACGTTTAGC...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGAAAAAGCAAACGTATaGTGGAAGATTGTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSEKANV*WKIVFL
Trigger: TAAGAACACAATCTTCCAGCATACGTTTGCTTTTTC...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGGTATTTGAAGATAAATaGAGAGGTCACAATCAGACA +
Preference number: 4 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQVFEDK*RGHNQT
Trigger: TGTCTGATTGTGACCTCTGCATTTATCTTCAAATAC...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp AAACAAAACTCCAAAGCAACAAACTGTGTACTCATGCATAACACCTCCAACAGGCATAATCAGGTCCTCTaGAAGTGGGAGTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: KQNSKATNCVLMHNTSNRHNQVL*KWESNC
Trigger: ACAGTTGGACTCCCACTTGCAGAGGACCTGATTATG...CCTGTTGGAGGTGTTATGCATGAGTACACAGTTTGTTGCTTTGGAGTTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp AAAGCAACAAACTGTGTACTCATGCATAACACCTCCAACAGGAACAAACTAATTGGCCTGCTTGGCTACTaGACAGTGAACTTGTCGCAT +
Preference number: 4 (lower is better)
Translates to: KATNCVLMHNTSNRNKLIGLLGY*TVNLSH
Trigger: ATGCGACAAGTTCACTGTGCAGTAGCCAAGCAGGCC...AATTAGTTTGTTCCTGTTGGAGGTGTTATGCATGAGTACACAGTTTGTTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTGGCCGCTTCCCTTCTTaGTTTCTTTCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIGRFPS*FLSPAE
Trigger: TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCC...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 4 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCATTTCTTGGATGCTTCTaGGGACCACTCCAGGATATT +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAFLGCF*GPLQDI
Trigger: AATATCCTGGAGTGGTCCCCAGAAGCATCCAAGAAA...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTAAGAAATTGCACTGCTaGAGGATGAGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIKKLHC*RMRAAL
Trigger: CAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTT...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCAAAGTTCTGTGTAGGCTaGATGTGGGGTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSKFCVG*MWGGCW
Trigger: CCAGCAGCCACCCCACATCCAGCCTACACAGAACTT...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAACAACTCTTGGGGTTTaGAACAGTCTCTCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNITTLGV*NSLSSY
Trigger: GTAACTGGAGAGACTGTTCCAAACCCCAAGAGTTGT...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CATTTTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCTCTCCTTTTAAGAGTTaGACTAGTTCTGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: HFNCMLCFLPGALQSLAPSPFKS*TSSVDV
Trigger: AACATCCACAGAACTAGTCCAACTCTTAAAAGGAGA...GGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGATCTCGCCAATACTGTaGACATGTGCAACACATTCA +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGISPIL*TCATHS
Trigger: TGAATGTGTTGCACATGTCCACAGTATTGGCGAGAT...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAGGATTTCTTGTGGCTTaGGTGTGTGTCCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIGFLVA*VCVHVF
Trigger: AAACACATGGACACACACCCAAGCCACAAGAAATCC...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679177.1
CDS-3UTR CCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCCAAGAAGTCCTCGCCTaGGTACAAAATTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCQEVLA*VQNSSA
Trigger: AGCAGAGGAATTTTGTACCCAGGCGAGGACTTCTTG...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAAAGGAAGGCAGGGATTTaGATGGATTCTTCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQRKAGI*MDSSRS
Trigger: TGACCTAGAAGAATCCATCCAAATCCCTGCCTTCCT...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGATGGAAGATAGAGGATaGCCCCTGTCAGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRMEDRG*PLSEKG
Trigger: TCCCTTCTCTGACAGGGGCCATCCTCTATCTTCCAT...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCACAGGAGGGGGCGGCTTaGTTCCTATATCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSQEGAA*FLYLLN
Trigger: GTTCAGCAGATATAGGAACCAAGCCGCCCCCTCCTG...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACCACGAACTGCTCTTATaGACAACACTCGAAAGGATG +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHHELLL*TTLERM
Trigger: CATCCTTTCGAGTGTTGTCCATAAGAGCAGTTCGTG...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCGGGAGTTCTCGGAAATaGCCCAACAGGAGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFGSSRK*PNRRFD
Trigger: ATCAAACCTCCTGTTGGGCCATTTCCGAGAACTCCC...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGACGATGATGATGATTTaGGCGAACTCCAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQETMMMI*ANSSSE
Trigger: CTCGGAGCTGGAGTTCGCCCAAATCATCATCATCGT...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CCA 90 bp ACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGAACAGAAGAAGTTATCACTGTCTTGGTaGTATCCATTCTCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: TSPGNPKLHSGELQEQKKLSLSW*YPFSGL
Trigger: AAGACCAGAGAATGGATACCACCAAGACAGTGATAA...CTTCTTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTCGCCTGGTGGAATTGTaGAGAGAAGTTCATACACGC +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFRLVEL*REVHTR
Trigger: GCGTGTATGAACTTCTCTCCACAATTCCACCAGGCG...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677744.1
3UTR CAA 72 bp AGTTTCTGCAACAACAAAAATGTGCACTTTTCACTGTaGCCTGACACCTTCGTGATGCTACAGCAGGAGATA +
Preference number: 4 (lower is better)
Translates to: SFCNNKNVHFSL*PDTFVMLQQEI
Trigger: TATCTCCTGCTGTAGCATCACGAAGGTGTCAGGCAACAGTGAAAAGTGCACATTTTTGTTGTTGCAGAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATTCTGCATTGTTCTGCTaGAACTGCAGTCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYSALFC*NCSLLP
Trigger: GGGCAGCAGACTGCAGTTTCAGCAGAACAATGCAGA...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGGTTTCTTTCTCCAGCTaGAGTGCACGTTGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRVSFSS*SARWKE
Trigger: TTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAAC...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCGATGCACTGCTATTTaGTGCAAACTCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRRCTAI*CKLLQQ
Trigger: TTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTAAAAATTCGCTTCTGCTCTCTTGGGATTTCTTGTGGCTTGGGTGTGTGTCCGAGGAGCCTCTTTCTTaGAAGATGATTAAAGGTATC +
Preference number: 4 (lower is better)
Translates to: FKNSLLLSWDFLWLGCVSEEPLS*KMIKGI
Trigger: GATACCTTTAATCATCTTTCAAGAAAGAGGCTCCTC...GGACACACACCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGGAGGAGCCTCTTTCTTaGAAGATGATTAAAGGTATC +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGEEPLS*KMIKGI
Trigger: GATACCTTTAATCATCTTTCAAGAAAGAGGCTCCTC...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATCTGTTCACATCTCTGTaGTCTGTAGCGGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYLFTSL*SVAVLA
Trigger: TGCCAGCACCGCTACAGATCACAGAGATGTGAACAG...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TTTCCTTCTGCTGAAGGGAAATTGACCATCAATTCATGTTATGACCTTGGCTTTGCTGAACTCAGAACATaGGGCACCTTAGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FPSAEGKLTINSCYDLGFAELRT*GTLVAE
Trigger: TTCAGCAACTAAGGTGCCTCATGTTCTGAGTTCAGC...AAAGCCAAGGTCATAACATGAATTGATGGTCAATTTCCCTTCAGCAGAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp AAAAGAGGCAGATACGTGACAGGTGGAAATCTTTTTCTGTATATAACTGGGAATAGATGCCTCTGGAGCTaGACAAAGTCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KRGRYVTGGNLFLYITGNRCLWS*TKSSAA
Trigger: TGCAGCAGAAGACTTTGTTCAGCTCCAGAGGCATCT...ATTCCCAGTTATATACAGAAAAAGATTTCCACCTGTCACGTATCTGCCTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCTCTGTGCTCCGCCTCTaGAACTTTTACACTATACAG +
Preference number: 4 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFSVLRL*NFYTIQ
Trigger: CTGTATAGTGTAAAAGTTTCAGAGGCGGAGCACAGA...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGTTAAGAACAGGTCTTTaGACTGAGCCTCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRLRTGL*TEPPSV
Trigger: CACTGAAGGAGGCTCAGTTCAAAGACCTGTTCTTAA...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR TCA 90 bp TTTTATGGAAACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGATACTCTAAGAGGGTGTaGTCTGTCACTGAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: FYGNISRKSQAAQWRITGYSKRV*SVTEKR
Trigger: TCTTTTCTCAGTGACAGATCACACCCTCTTAGAGTA...TCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGTTTCCATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp AATTCCCCCTATAGGATTCATTTAAAATCCACCCTCACCTCCACCTCCACATTACCTGTGTTACAAGAATaGCTTCACAGCTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: NSPYRIHLKSTLTSTSTLPVLQE*LHSLKY
Trigger: GTACTTCAAGCTGTGAAGTCATTCTTGTAACACAGG...TAATGTGGAGGTGGAGGTGAGGGTGGATTTTAAATGAATCCTATAGGGGGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATCTGAAGAAATTGCACTaGTGGAGGATGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDLKKLH*WRMRAA
Trigger: TGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCAGTGCTTTTTACCCGGTaGTCTTCAGTCACTTGCCCC +
Preference number: 4 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSVLFTR*SSVTCP
Trigger: GGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCAC...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CATTTTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCTTAAAAATTCGCTTCTaGTCTCTTGGGATTTCTTGT +
Preference number: 4 (lower is better)
Translates to: HFNCMLCFLPGALQSLAPLKIRF*SLGISC
Trigger: ACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAA...GGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TTTCCTTCTGCTGAAGGGAAATTGACCATCAATTCATGTTATGACCTTGGCTTTCAACACTCGAAAGGATaGCCACACCCAAGATTCAAC +
Preference number: 4 (lower is better)
Translates to: FPSAEGKLTINSCYDLGFQHSKG*PHPRFN
Trigger: GTTGAATCTTGGGTGTGGGCATCCTTTCGAGTGTTG...AAAGCCAAGGTCATAACATGAATTGATGGTCAATTTCCCTTCAGCAGAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGATGAATCCCAAGGGGTaGACCCTACAGTATACGATG +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEMNPKG*TLQYTM
Trigger: CATCGTATACTGTAGGGTGCACCCCTTGGGATTCAT...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGCTTCCAATCTAGAACATTCTCATaGTCAACAGTTCTCCCACAA +
Preference number: 4 (lower is better)
Translates to: LPRSATWHSSVIISRGFQSRTFS*STVLPQ
Trigger: TTGTGGGAGAACTGTTGAGCATGAGAATGTTCTAGA...TTGGAAGCCCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCAAGCCGCAGCTCTCTGTaGTCCGCCTCTGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSSRSSL*SASETF
Trigger: AAAAGTTTCAGAGGCGGAGCACAGAGAGCTGCGGCT...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCCTTCAAAGTCAGGATaGTCAATGTTCCTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRPSKSG*SMFLGS
Trigger: ACTGCCTAGGAACATTGAGCATCCTGACTTTGAAGG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR CCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGAAAAAGCGAACTGGCTaGTTCTTCCCCACAATAATA +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGKKRTG*FFPTII
Trigger: TATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTT...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGAGAAAAAGCGAACTaGCTGGTTCTTCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEGEKAN*LVLPHN
Trigger: ATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCC...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCTCCACTTTATACCTTaGCACACAACACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGLHFIP*HTTQEF
Trigger: AAATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAG...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCGAAGAGAGGCTAATCTaGAGAGCCAGTGAACCTTCA +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFEERLI*RASEPS
Trigger: TGAAGGTTCACTGGCTCTCCAGATTAGCCTCTCTTC...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATGCCGCTGATTATTTTTAATGATTTTGTGCTATGGTTTGACCACAGCATTAAGGGTCCTTCACTTGGCTaGCTGACAGCCAAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: MPLIIFNDFVLWFDHSIKGPSLG*LTAKSL
Trigger: AAGAGACTTGGCTGTCAGCCAGCCAAGTGAAGGACC...CTTAATGCTGTGGTCAAACCATAGCACAAAATCATTAAAAATAATCAGCGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp AAAAGAGGCAGATACGTGACAGGTGGAAATCTTTTTCTGTATATAACTGGGAATCCACAGTCGTTCTGTTaGTTACAGACCAGCGAACCA +
Preference number: 4 (lower is better)
Translates to: KRGRYVTGGNLFLYITGNPQSFC*LQTSEP
Trigger: TGGTTCGCTGGTCTGTAACCAACAGAACGACTGTGG...ATTCCCAGTTATATACAGAAAAAGATTTCCACCTGTCACGTATCTGCCTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCCTATCTTTGCCTTTaGTGGGTACTATTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCSYLCL*WVLLCS
Trigger: AGAGCACAATAGTACCCATCAAAGGCAAAGATAGGA...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 4 (lower is better)
Translates to: HPKVSKSFSDALLFDANSITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCAATGGGAATATACTaGGGAGTCACATATTTCAAC +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLAMGIY*GVTYFN
Trigger: GTTGAAATATGTGACTCCTCAGTATATTCCCATTGC...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTACTGCAGGTGAGAACTaGAATGATGGAATCACTCAC +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLITAGEN*NDGITH
Trigger: GTGAGTGATTCCATCATTTCAGTTCTCACCTGCAGT...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGTCTGTGCTCCGCCTCTaGAACTTTTACACTATACAG +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRSVLRL*NFYTIQ
Trigger: CTGTATAGTGTAAAAGTTTCAGAGGCGGAGCACAGA...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AAAAGCTACCCTACAGAAATACCCAGTTTTTGGCGTCACCTGCTGGCTTTATCTAATGACTTCACAGCTTaGAGTACAGAAGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: KSYPTEIPSFWRHLLALSNDFTA*STEAKQ
Trigger: TTGTTTTGCTTCTGTACTTCAAGCTGTGAAGTCATT...AGATAAAGCCAGCAGGTGACGCCAAAAACTGGGTATTTCTGTAGGGTAGCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp AATTCCCCCTATAGGATTCATTTAAAATCCACCCTCACCTCCACCTCCACATTAACACTTTTAAAGTGCTaGATGTTCCTAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: NSPYRIHLKSTLTSTSTLTLLKC*MFLKAG
Trigger: ACCAGCCTTTAGGAACATTCAGCACTTTAAAAGTGT...TAATGTGGAGGTGGAGGTGAGGGTGGATTTTAAATGAATCCTATAGGGGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATATACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGCACAAAGGAGCTCCTTaGACTCATCTAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEHKGAP*THLTSP
Trigger: TGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCATATCTTTTCTTGGATaGTTCTGGGGACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFISFLG*FWGPLQ
Trigger: CTGGAGTGGTCCCCAGAAGCATCCAAGAAAAGATAT...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGGGTTTGGTAGAATCCTaGGGGAATTTGGGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRGLVES*GNLGRF
Trigger: AAACCTACCCAAATTCCCGCAGGATTCTACCAAACC...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTAAACGTGTTGGCTGCTaGTCTTATAAAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIKRVGC*SYKSQC
Trigger: GCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTT...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTTGGCCCCTATTTCCTaGCTCATAAGTTTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFLAPIS*LISLSQ
Trigger: TTGGCTCAAACTTATGAGGCAGGAAATAGGGGCCAA...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATGGGAAGTTCTCCCTTTaGCCACCTGTCATTCAATTG +
Preference number: 4 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDGKFSL*PPVIQL
Trigger: CAATTGAATGACAGGTGGGCAAAGGGAGAACTTCCC...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGCTTCCAACTGGTCATAAACTGTTaGTTGTTTGTTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: LPRSATWHSSVIISRGFQLVINC*LFVHTS
Trigger: AGAAGTGTGAACAAACAAGCAACAGTTTATGACCAG...TTGGAAGCCCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCATGGCAAAACCGAGTTTaGTTTTTGGGTCCGTATTAT +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAWQNRV*FLGPYY
Trigger: ATAATACGGACCCAAAAAGCAAACTCGGTTTTGCCA...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATACGATGATGATGATTTaGGCGAACTCCAGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYTMMMI*ANSSSA
Trigger: AGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGT...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000676773.1
ENST00000677055.1
ENST00000677910.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 4 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTTTTCTTGGATGCTTCTaGGGACCACTCCAGGATATT +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFFLGCF*GPLQDI
Trigger: AATATCCTGGAGTGGTCCCCAGAAGCATCCAAGAAA...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCCCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATGGCTTATTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGTACAATAACCCACAATaGCTTATTACCACGATCAGC +
Preference number: 4 (lower is better)
Translates to: MAYYHDQQHGILPSLFLGYNNPQ*LITTIS
Trigger: GCTGATCGTGGTAATAAGCCATTGTGGGTTATTGTA...CCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAATAAGCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGTTGGACTAGTTCTGTaGATGTTACTGTGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRVGLVL*MLLCAK
Trigger: CTTTGCACACAGTAACATCCACAGAACTAGTCCAAC...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAATTGTGTTCTTATAGATaGGATTCAAGATGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQLCSYR*DSRCLG
Trigger: CCCAAGGCATCTTGAATCCCATCTATAAGAACACAA...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp AAAGCAACAAACTGTGTACTCATGCATAACACCTCCAACAGGAACAAACTAATTTCCCCATTTAGAAGCTaGTGGAGAAGCCCTAAGAAC +
Preference number: 4 (lower is better)
Translates to: KATNCVLMHNTSNRNKLISPFRS*WRSPKN
Trigger: GTTCTTAGGGCTTCTCCACCAGCTTCTAAATGGGGA...AATTAGTTTGTTCCTGTTGGAGGTGTTATGCATGAGTACACAGTTTGTTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp TCTTCCTTTAAAAGCTCTTTCCTAAGCCCCGATGATGGGTTCACTACCTTTGGGTTTCTATTTGTGGGATaGTTAACACCATCTTCCATT +
Preference number: 4 (lower is better)
Translates to: SSFKSSFLSPDDGFTTFGFLFVG*LTPSSI
Trigger: AATGGAAGATGGTGTTAACCATCCCACAAATAGAAA...CCCAAAGGTAGTGAACCCATCATCGGGGCTTAGGAAAGAGCTTTTAAAGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR TCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AAAAGAGGCAGATACGTGACAGGTGGAAATCTTTTTCTGTATATAACTGGGAATCGATGCACTGCTATTTaGTGCAAACTCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: KRGRYVTGGNLFLYITGNRCTAI*CKLLQQ
Trigger: TTGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCG...ATTCCCAGTTATATACAGAAAAAGATTTCCACCTGTCACGTATCTGCCTCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCAATTTGGGTAGGTTTTaGGCACTGCATTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCNLGRF*ALHSFK
Trigger: CTTAAAGGAATGCAGTGCTCAAAACCTACCCAAATT...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTTCAGAACCTCCACTGTaGCTCTCAACTGTATATACT +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFSEPPL*LSTVYT
Trigger: AGTATATACAGTTGAGAGTCACAGTGGAGGTTCTGA...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATACTTCAAAAGAGCTACTaGTCTAAATCACCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNILQKSY*SKSPFP
Trigger: AGGAAAAGGTGATTTAGATCAGTAGCTCTTTTGAAG...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp AAACAAAACTCCAAAGCAACAAACTGTGTACTCATGCATAACACCTCCAACAGGTGCATGACAATAAAATaGGGAAACGGTCCCTATGAT +
Preference number: 4 (lower is better)
Translates to: KQNSKATNCVLMHNTSNRCMTIK*GNGPYD
Trigger: ATCATAGGGACCGTTTCCTCATTTTATTGTCATGCA...CCTGTTGGAGGTGTTATGCATGAGTACACAGTTTGTTGCTTTGGAGTTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR GCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGCAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGCAAATAAACACTGTTTaGGGTCAGACCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRQINTV*GQTRWK
Trigger: CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTG...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCATTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAGTAGGTTTTGAGCACTaGATTCCTTTAAGAATGCTA +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIVGFEH*IPLRML
Trigger: TAGCATTCTTAAAGGAATGCAGTGCTCAAAACCTAC...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGGTAGGTTTTGAGCACTaGATTCCTTTAAGAATGCTA +
Preference number: 4 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRVGFEH*IPLRML
Trigger: TAGCATTCTTAAAGGAATGCAGTGCTCAAAACCTAC...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AAAAGAGGCAGATACGTGACAGGTGGAAATCTTTTTCTGTATATAACTGGGAATAAACGTGTTGGCTGCTaGTCTTATAAAAGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: KRGRYVTGGNLFLYITGNKRVGC*SYKSQC
Trigger: GCACTGGCTTTTATAAGAGCAGCAGCCAACACGTTT...ATTCCCAGTTATATACAGAAAAAGATTTCCACCTGTCACGTATCTGCCTCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGGAAAAAGCAAACGTATaGTGGAAGATTGTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGEKANV*WKIVFL
Trigger: TAAGAACACAATCTTCCAGCATACGTTTGCTTTTTC...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGAACAAAGTCTTCTGCTaGAGGCTGATTTACTTATTC +
Preference number: 4 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRNKVFC*RLIYLF
Trigger: GAATAAGTAAATCAGCCTGCAGCAGAAGACTTTGTT...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGAACAAAGTCTTCTGCTaGAGGCTGATTTACTTATTC +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLNKVFC*RLIYLF
Trigger: GAATAAGTAAATCAGCCTGCAGCAGAAGACTTTGTT...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCTGAACAAAGTCTTCTaGTGCAGGCTGATTTACTTA +
Preference number: 4 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRLNKVF*CRLIYL
Trigger: TAAGTAAATCAGCCTGCAGCAGAAGACTTTGTTCAG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTAAACCCGAAAGAGCATaGATCATCCATAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFKPERA*IIHSSS
Trigger: AGAACTGCTATGGATGATGCATGCTCTTTCGGGTTT...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677910.1
CDS-3UTR GCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCCAAACTGTGTACTCATaGATAACACCTCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFQTVYS*ITPPTG
Trigger: TCCTGTTGGAGGTGTTATGCATGAGTACACAGTTTG...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677910.1
CDS-3UTR CCA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 4 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCCTCCACTTTATACCTTaGCACACAACACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCLHFIP*HTTQEF
Trigger: AAATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAG...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 4 (lower is better)
Translates to: IFPILSSIQKSPKASAMHTSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 4 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLTSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCAGGATCAGACAACTCTTaGGGTTTGGAACAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSGSDNS*GLEQSL
Trigger: GAGAGACTGTTCCAAACCCCAAGAGTTGTCTGATCC...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATATCTCCTTTTAAGAGTTaGACTAGTTCTGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNISPFKS*TSSVDV
Trigger: AACATCCACAGAACTAGTCCAACTCTTAAAAGGAGA...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATGCCGCTGATTATTTTTAATGATTTTGTGCTATGGTTTGACCACAGCATTAAGTCTTGGGATTTCTTGTaGCTTGGGTGTGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: MPLIIFNDFVLWFDHSIKSWDFL*LGCVSM
Trigger: CATGGACACACACCCAAGCCACAAGAAATCCCAAGA...CTTAATGCTGTGGTCAAACCATAGCACAAAATCATTAAAAATAATCAGCGGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATCCCTACAGTATACGATaGAAACAACACGTGGGTCTA +
Preference number: 4 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDPYSIR*KQHVGL
Trigger: TAGACCCACGTGTTGTTTCCATCGTATACTGTAGGG...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CAA 72 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCCACTTTATACCTTGGC +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSS*HSSNFSTLYLG
Trigger: GCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 4 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATGATATTCCTTGGGCCTaGTTACAATCCACAGGTGAA +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYDIPWA*LQSTGE
Trigger: TTCACCTGTGGATTGTAATCAGGCCCAAGGAATATC...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTCCTTCTGCTGAAGGGAAATTGACCATCAATTCATGTTATGACCTTGGCTTTGCAATGGGAATATACTaGGGAGTCACATATTTCAAC +
Preference number: 4 (lower is better)
Translates to: FPSAEGKLTINSCYDLGFAMGIY*GVTYFN
Trigger: GTTGAAATATGTGACTCCTCAGTATATTCCCATTGC...AAAGCCAAGGTCATAACATGAATTGATGGTCAATTTCCCTTCAGCAGAAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCAAAGCACCATTTTAAGTaGGGCACAACAAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSKHHFK*GTTKVG
Trigger: TCCCACCTTTGTTGTGCCTCACTTAAAATGGTGCTT...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAACATATTTCAACAGTATaGAGAATAACCACCTTGCAT +
Preference number: 4 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQHISTV*RITTLH
Trigger: ATGCAAGGTGGTTATTCTGCATACTGTTGAAATATG...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCAGGTTTGGTAGAATCCTaGGGGAATTTGGGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSGLVES*GNLGRF
Trigger: AAACCTACCCAAATTCCCGCAGGATTCTACCAAACC...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTTTTAACTGCATGTTGTaGTTTTTACCCGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIFNCML*FLPGAL
Trigger: AAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAA...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGTCTTATAAAAGCCAGTaGTTACATCTGCAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRSYKSQ*LHLQKK
Trigger: TTTCTTCTGCAGATGTAAGCACTGGCTTTTATAAGA...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAAGAAAAAGCAAACGTATaGTGGAAGATTGTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQEKANV*WKIVFL
Trigger: TAAGAACACAATCTTCCAGCATACGTTTGCTTTTTC...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATCAAAATTCCACGAACTaGTCTTATGGACAACACTCG +
Preference number: 4 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDQNSTN*SYGQHS
Trigger: CGAGTGTTGTCCATAAGAGCAGTTCGTGGAATTTTG...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTTCTAGAACATTCTCATaGTCAACAGTTCTCCCACAA +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLISRTFS*STVLPQ
Trigger: TTGTGGGAGAACTGTTGAGCATGAGAATGTTCTAGA...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATACCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 4 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTCCTTCTGCTGAAGGGAAATTGACCATCAATTCATGTTATGACCTTGGCTTTGTGGGTTTTATTTCATaGTATCTTCAAAGCATCCCG +
Preference number: 4 (lower is better)
Translates to: FPSAEGKLTINSCYDLGFVGFIS*YLQSIP
Trigger: CGGGATGCTTTGAAGATACCATGAAATAAAACCCAC...AAAGCCAAGGTCATAACATGAATTGATGGTCAATTTCCCTTCAGCAGAAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTCTCCACTTTATACCTTaGCACACAACACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFLHFIP*HTTQEF
Trigger: AAATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAG...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCCTCCACTTTATACCTTaGCACACAACACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFLHFIP*HTTQEF
Trigger: AAATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAG...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATACAACTCTTGGGGTTTaGAACAGTCTCTCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYTTLGV*NSLSSY
Trigger: GTAACTGGAGAGACTGTTCCAAACCCCAAGAGTTGT...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATAAAAAGAAGAGCCGCTaGATGGAAGATAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYKKKSR*MEDRGW
Trigger: CCATCCTCTATCTTCCATCCAGCGGCTCTTCTTTTT...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CCA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCATTTTGTTCTACCCATTaGGTAGGATATGTGCATAAT +
Preference number: 4 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAFCSTH*VGYVHN
Trigger: ATTATGCACATATCCTACCCAATGGGTAGAACAAAA...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
3UTR CAA 72 bp AGGTATTCTTTCCCTACAATCTCTACTGTTACTTCATaGGCTCCACAGCTTCAGTTTGTAAAAGAAAAAGGC +
Preference number: 4 (lower is better)
Translates to: RYSFPTISTVTS*APQLQFVKEKG
Trigger: GCCTTTTTCTTTTACAAACTGAAGCTGTGGAGCCAATGAAGTAACAGTAGAGATTGTAGGGAAAGAATACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR TCA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTATTACAATCCACAGGTaGAAAGACAACATACAGAAC +
Preference number: 4 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFITIHR*KDNIQN
Trigger: GTTCTGTATGTTGTCTTTTCACCTGTGGATTGTAAT...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATCTGCTGAAGGGAAATTaGCCATCAATTCATGTTATG +
Preference number: 4 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDLLKGN*PSIHVM
Trigger: CATAACATGAATTGATGGTCAATTTCCCTTCAGCAG...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR TCA 90 bp ATGCCGCTGATTATTTTTAATGATTTTGTGCTATGGTTTGACCACAGCATTAAGAAAGAGGCAGATACGTaGCAGGTGGAAATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: MPLIIFNDFVLWFDHSIKKEADT*QVEIFF
Trigger: GAAAAAGATTTCCACCTGTCACGTATCTGCCTCTTT...CTTAATGCTGTGGTCAAACCATAGCACAAAATCATTAAAAATAATCAGCGGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCGTGTTTGCTCATTTaGTTTTACTTATTTGTACCA +
Preference number: 4 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFPCLLI*FYLFVP
Trigger: TGGTACAAATAAGTAAAACCAAATGAGCAAACACGG...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATCTCCACTTTATACCTTaGCACACAACACAGGAATTT +
Preference number: 4 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDLHFIP*HTTQEF
Trigger: AAATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAG...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATCCAAATATCTTTTCTTaGATGCTTCTGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYPNIFS*MLLGTT
Trigger: AGTGGTCCCCAGAAGCATCCAAGAAAAGATATTTGG...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CCA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 4 (lower is better)
Translates to: FACNSPKRNQKQRPCLLITSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATTACTATTGTGCTCTCTaGATTGTTCTGCTGAAACTG +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYYYCAL*IVLLKL
Trigger: CAGTTTCAGCAGAACAATGCAGAGAGCACAATAGTA...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR TCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCACTTCAAAAGAGCTACTaGTCTAAATCACCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSLQKSY*SKSPFP
Trigger: AGGAAAAGGTGATTTAGATCAGTAGCTCTTTTGAAG...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR GCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATTTTTCTCATAAACTATaGAGCCTAAGAGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYFSHKL*SLRVAE
Trigger: CTCTGCTACTCTTAGGCTGCATAGTTTATGAGAAAA...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp AAAAGAGGCAGATACGTGACAGGTGGAAATCTTTTTCTGTATATAACTGGGAATGAAAAAGCAAACGTATaGTGGAAGATTGTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: KRGRYVTGGNLFLYITGNEKANV*WKIVFL
Trigger: TAAGAACACAATCTTCCAGCATACGTTTGCTTTTTC...ATTCCCAGTTATATACAGAAAAAGATTTCCACCTGTCACGTATCTGCCTCTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp AAAAGAGGCAGATACGTGACAGGTGGAAATCTTTTTCTGTATATAACTGGGAATATTAGTGAATGGAAATaGAGTCCTCACGATAAATCT +
Preference number: 4 (lower is better)
Translates to: KRGRYVTGGNLFLYITGNISEWK*SPHDKS
Trigger: AGATTTATCGTGAGGACTGCATTTCCATTCACTAAT...ATTCCCAGTTATATACAGAAAAAGATTTCCACCTGTCACGTATCTGCCTCTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp ATGCCGCTGATTATTTTTAATGATTTTGTGCTATGGTTTGACCACAGCATTAAGGATGCAACTTTCCATTaGTATATATACGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: MPLIIFNDFVLWFDHSIKDATFH*YIYAGH
Trigger: ATGACCAGCGTATATATAGCAATGGAAAGTTGCATC...CTTAATGCTGTGGTCAAACCATAGCACAAAATCATTAAAAATAATCAGCGGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR GCA 90 bp AAAGCAACAAACTGTGTACTCATGCATAACACCTCCAACAGGAACAAACTAATTAAAAGTCTATCCCTCTaGCATGCTATAAATGGAAAA +
Preference number: 4 (lower is better)
Translates to: KATNCVLMHNTSNRNKLIKSLSL*HAINGK
Trigger: TTTTCCATTTATAGCATGGCAGAGGGATAGACTTTT...AATTAGTTTGTTCCTGTTGGAGGTGTTATGCATGAGTACACAGTTTGTTGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CCA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATACAAGTCAGAAATGCTaGAACTTAATCTTCCCTATC +
Preference number: 4 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYTSQKC*NLIFPI
Trigger: GATAGGGAAGATTAAGTTCCAGCATTTCTGACTTGT...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR GCA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCACATATTTCAACAGTATaGAGAATAACCACCTTGCAT +
Preference number: 4 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSHISTV*RITTLH
Trigger: ATGCAAGGTGGTTATTCTGCATACTGTTGAAATATG...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS GCA 90 bp CGGGCGGGCGGTACCTGGGTGTGGCACCTGGGCGGCGGCGGTCCCTaGTCCCGTCAGCCGTCCAGCCAGGGCGCGGAGGCCATGGCGCGG +
Preference number: 5 (lower is better)
Translates to: RAGGTWVWHLGGGGP*SRQPSSQGAEAMAR
Trigger: CCGCGCCATGGCCTCCGCGCCCTGGCTGGACGGCTGACGGGAGCAGGGACCGCCGCCGCCCAGGTGCCACACCCAGGTACCGCCCGCCCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000590371.5
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS CCA 90 bp CCTGCCCGGCTCTCGCGCGGGCGGGCGGTACCTGGGTGTGGCACCTaGGCGGCGGCGGTCCCTGCTCCCGTCAGCCGTCCAGCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: PARLSRGRAVPGCGT*AAAVPAPVSRPARA
Trigger: CGCCCTGGCTGGACGGCTGACGGGAGCAGGGACCGCCGCCGCCCAGGTGCCACACCCAGGTACCGCCCGCCCGCGCGAGAGCCGGGCAGG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS CCA 90 bp CGGCCCACCTGCCCGGCTCTCGCGCGGGCGGGCGGTACCTGGGTGTaGCACCTGGGCGGCGGCGGTCCCTGCTCCCGTCAGCCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RPTCPALARAGGTWV*HLGGGGPCSRQPSS
Trigger: GCTGGACGGCTGACGGGAGCAGGGACCGCCGCCGCCCAGGTGCCACACCCAGGTACCGCCCGCCCGCGCGAGAGCCGGGCAGGTGGGCCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS CCA 90 bp AGCCGTCCAGCCAGGGCGCGGAGGCCATGGCGCGGGTGGAGGGGCTaGCCCTCAGGCCCTCAGAACACGGGCGCCCCTGGCCACGCCGCT +
Preference number: 5 (lower is better)
Translates to: SRPARARRPWRGWRG*PSGPQNTGAPGHAA
Trigger: AGCGGCGTGGCCAGGGGCGCCCGTGTTCTGAGGGCCTGAGGGCCAGCCCCTCCACCCGCGCCATGGCCTCCGCGCCCTGGCTGGACGGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000590371.5
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS GCA 90 bp CCATCGCTCTGCTGGGCCGGCCTCTGGGAGCATCCGCGGCCCACCTaGCCGGCTCTCGCGCGGGCGGGCGGTACCTGGGTGTGGCACCTG +
Preference number: 5 (lower is better)
Translates to: PSLCWAGLWEHPRPT*PALARAGGTWVWHL
Trigger: CAGGTGCCACACCCAGGTACCGCCCGCCCGCGCGAGAGCCGGGCAGGTGGGCCGCGGATGCTCCCAGAGGCCGGCCCAGCAGAGCGATGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS TCA 90 bp CCCGCGTTTGGGGAATTCTCGGAAACGGGCGGGCTGGGCCATCACTaGGCCTCCGACGGCCCCGGCGCCAGCAGCGAGGGACGGCGCGGA +
Preference number: 5 (lower is better)
Translates to: PAFGEFSETGGLGHH*ASDGPGASSEGRRG
Trigger: TCCGCGCCGTCCCTCGCTGCTGGCGCCGGGGCCGTCGGAGGCTCAGTGATGGCCCAGCCCGCCCGTTTCCGAGAATTCCCCAAACGCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS GCA 90 bp GCCCTCAGAACACGGGCGCCCCTGGCCACGCCGCTGCCAGCATCCTaGAGGGTCGCACCTGCACGCGGGTGCTCCTTGTCCCAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: ALRTRAPLATPLPAS*RVAPARGCSLSQPQ
Trigger: CTGCGGCTGGGACAAGGAGCACCCGCGTGCAGGTGCGACCCTGCAGGATGCTGGCAGCGGCGTGGCCAGGGGCGCCCGTGTTCTGAGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000590371.5
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS GCA 90 bp CTGGCCCTCAGGCCCTCAGAACACGGGCGCCCCTGGCCACGCCGCTaGCAGCATCCTGCAGGGTCGCACCTGCACGCGGGTGCTCCTTGT +
Preference number: 5 (lower is better)
Translates to: LALRPSEHGRPWPRR*QHPAGSHLHAGAPC
Trigger: ACAAGGAGCACCCGCGTGCAGGTGCGACCCTGCAGGATGCTGGCAGCGGCGTGGCCAGGGGCGCCCGTGTTCTGAGGGCCTGAGGGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000590371.5
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS CCA 90 bp GTGCTTCTCCCCTGCAGATCCGCTCCCAGAGCGTGCTCGCCCGGCTaGGAGCACCCACAGCGTCCCTCAGGCTGCGAGCCAGGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: VLLPCRSAPRACSPG*EHPQRPSGCEPGCG
Trigger: CCCGCAGCCTGGCTCGCAGCCTGAGGGACGCTGTGGGTGCTCCCAGCCGGGCGAGCACGCTCTGGGAGCGGATCTGCAGGGGAGAAGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS CCA 90 bp TGCCCTGCCCGGCCTCCAGCAGAGGCGCAAGTCCGCGCTCGCAGGTaGACGGCCCTTTCCGAGCCTGGGCTCAGGATCCTCCAGCGAGTG +
Preference number: 5 (lower is better)
Translates to: CPARPPAEAQVRARR*TALSEPGLRILQRV
Trigger: CACTCGCTGGAGGATCCTGAGCCCAGGCTCGGAAAGGGCCGTCCACCTGCGAGCGCGGACTTGCGCCTCTGCTGGAGGCCGGGCAGGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS GCA 90 bp AGAGCGTGCTCGCCCGGCTGGGAGCACCCACAGCGTCCCTCAGGCTaGGAGCCAGGCTGCGGGCTGTCCTCTTCTGGTGCTCCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: RACSPGWEHPQRPSG*EPGCGLSSSGAPSP
Trigger: TGGAGAGGGAGCACCAGAAGAGGACAGCCCGCAGCCTGGCTCGCAGCCTGAGGGACGCTGTGGGTGCTCCCAGCCGGGCGAGCACGCTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS CCA 90 bp GATGACTGTCCAACCGCATTCAGTGGCCGCCCGATGAGGGCAGGCTaGGTTGAGGAAGCCCTGGCAGAGGTGGCCCGGGGCCCGCCCGTG +
Preference number: 5 (lower is better)
Translates to: DDCPTAFSGRPMRAG*VEEALAEVARGPPV
Trigger: CACGGGCGGGCCCCGGGCCACCTCTGCCAGGGCTTCCTCAACCCAGCCTGCCCTCATCGGGCGGCCACTGAATGCGGTTGGACAGTCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS-3UTR CAA 90 bp CGGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGTTCCTCCCGGCTCAGTaGAAGATGCCCGGAGGCGGG +
Preference number: 5 (lower is better)
Translates to: RQPVLPPPALVRAVDEGPFLPAQ*KMPGGG
Trigger: CCCGCCTCCGGGCATCTTCAACTGAGCCGGGAGGAA...CGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS GCA 90 bp CAAGGCAGGACACGCGACAGGCGGGACGCTCACGTTAGGCTCGCGTaGTTCTCCCCTGCAGATCCGCTCCCAGAGCGTGCTCGCCCGGCT +
Preference number: 5 (lower is better)
Translates to: QGRTRDRRDAHVRLA*FSPADPLPERARPA
Trigger: AGCCGGGCGAGCACGCTCTGGGAGCGGATCTGCAGGGGAGAAGCACGCGAGCCTAACGTGAGCGTCCCGCCTGTCGCGTGTCCTGCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS CCA 90 bp CAGTGGCAAACGTATACGGCGGTCCAGCTGCTCGGAGACGAAGGGTaGGCTCAGGGACCGCCTGTGACGGGAGGGAAGGGCCCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QWQTYTAVQLLGDEG*AQGPPVTGGKGPAW
Trigger: CCAGGCCGGGCCCTTCCCTCCCGTCACAGGCGGTCCCTGAGCCCACCCTTCGTCTCCGAGCAGCTGGACCGCCGTATACGTTTGCCACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS TCA 90 bp CCAGGAGCCACGAGGGCACGTGGCCAAGTTTCCCAGCCTGGTGGCTaGGGCCGAGCCCCTCACTCAGGCCTTCCTGGCTCCCAACTCCGT +
Preference number: 5 (lower is better)
Translates to: PGATRARGQVSQPGG*GRAPHSGLPGSQLR
Trigger: ACGGAGTTGGGAGCCAGGAAGGCCTGAGTGAGGGGCTCGGCCTCAGCCACCAGGCTGGGAAACTTGGCCACGTGCCCTCGTGGCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 90 bp GGCCGTCACGGGAGAGCGCGAACTCAGCGTGTAGGGGCCCGCGTTTaGGGAATTCTCGGAAACGGGCGGGCTGGGCCATCACTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: GRHGRARTQRVGARV*GILGNGRAGPSLSL
Trigger: GAGGCTCAGTGATGGCCCAGCCCGCCCGTTTCCGAGAATTCCCCAAACGCGGGCCCCTACACGCTGAGTTCGCGCTCTCCCGTGACGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS CCA 90 bp AGGCCCAGGAGCCACGAGGGCACGTGGCCAAGTTTCCCAGCCTGGTaGCTGAGGCCGAGCCCCTCACTCAGGCCTTCCTGGCTCCCAACT +
Preference number: 5 (lower is better)
Translates to: RPRSHEGTWPSFPAW*LRPSPSLRPSWLPT
Trigger: AGTTGGGAGCCAGGAAGGCCTGAGTGAGGGGCTCGGCCTCAGCCACCAGGCTGGGAAACTTGGCCACGTGCCCTCGTGGCTCCTGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp GCCCCAGAACCCTGGCCTCTGTGGGCCACCCTGTGGCCTCCACCCTaGCGTCAGGTCCATGGTCAGGGCAGCTTCCTAAGAGTGTGCCAC +
Preference number: 5 (lower is better)
Translates to: APEPWPLWATLWPPP*RQVHGQGSFLRVCH
Trigger: GTGGCACACTCTTAGGAAGCTGCCCTGACCATGGACCTGACGGCAGGGTGGAGGCCACAGGGTGGCCCACAGAGGCCAGGGTTCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CCA 90 bp TGCCTCAGGAGGTCGCCTGCAGGTGCGCACGGAAGCGGCCGAGGTTaGGAAGACCCGTCCCCTCGTTCTTCCTTGGAGAGGCACCACAGC +
Preference number: 5 (lower is better)
Translates to: CLRRSPAGAHGSGRG*EDPSPRSSLERHHS
Trigger: GCTGTGGTGCCTCTCCAAGGAAGAACGAGGGGACGGGTCTTCCCAACCTCGGCCGCTTCCGTGCGCACCTGCAGGCGACCTCCTGAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS-3UTR CAA 90 bp AGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGCCTGTGCTCCAACTCTaGCGCTGTCCCGTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: SPSSRLRLWFGRLMKDRVPVLQL*RCPVEE
Trigger: TTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGG...CACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS GCA 90 bp AGCTTCCGGCATACTGCTCCCCGGACAAGCCTGTGCTCCAACTCTTaGGCTGTCCCGTCGAGGAAGCCGCCGGGCGAGGCTCAGGTCACT +
Preference number: 5 (lower is better)
Translates to: SFRHTAPRTSLCSNS*AVPSRKPPGEAQVT
Trigger: AGTGACCTGAGCCTCGCCCGGCGGCTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS GCA 90 bp GGCCTGAAAACCAGCTTCCGGCATACTGCTCCCCGGACAAGCCTGTaGTCCAACTCTTGCGCTGTCCCGTCGAGGAAGCCGCCGGGCGAG +
Preference number: 5 (lower is better)
Translates to: GLKTSFRHTAPRTSL*SNSCAVPSRKPPGE
Trigger: CTCGCCCGGCGGCTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCTGGTTTTCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS GCA 90 bp CCCATGTCACAGACTATGTGGTGCAAGCTGCCTCAGGAGGTCGCCTaGAGGTGCGCACGGAAGCGGCCGAGGTTGGGAAGACCCGTCCCC +
Preference number: 5 (lower is better)
Translates to: PMSQTMWCKLPQEVA*RCARKRPRLGRPVP
Trigger: GGGGACGGGTCTTCCCAACCTCGGCCGCTTCCGTGCGCACCTGCAGGCGACCTCCTGAGGCAGCTTGCACCACATAGTCTGTGACATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 90 bp GTGGGGACAGGACTCCAGGGATCTGCCCACGGGTCTGGCCAGGACTaGGGTGCTGGGCTTGCTTCAGAGCAGTTCCCTCTCCTCCACGGA +
Preference number: 5 (lower is better)
Translates to: VGTGLQGSAHGSGQD*GAGLASEQFPLLHG
Trigger: TCCGTGGAGGAGAGGGAACTGCTCTGAAGCAAGCCCAGCACCGCAGTCCTGGCCAGACCCGTGGGCAGATCCCTGGAGTCCTGTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676891.1
CDS CCA 90 bp GAAATGGCACACGCGCAAGCACGGAGGCATGAGGGGCCAGGGTCCTaGAGGACACTGGGCCGGGACAGATCAGACTCCAGGCAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: EMAHAQARRHEGPGS*RTLGRDRSDSRQGG
Trigger: CCCTCCTTGCCTGGAGTCTGATCTGTCCCGGCCCAGTGTCCTCCAGGACCCTGGCCCCTCATGCCTCCGTGCTTGCGCGTGTGCCATTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586207.5
CDS-3UTR CAA 90 bp TGGAGAGGCCCCCATTTAGCTCTGCGGCCTCGCGCCATCGTTTCCGGTGGGCAGCTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: WRGPHLALRPRAIVSGGQLWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...CTGCCCACCGGAAACGATGGCGCGAGGCCGCAGAGCTAAATGGGGGCCTCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS TCA 90 bp GGTCCTCTGGAGAGAGGAAATGGCACACGCGCAAGCACGGAGGCATaGGGGGCCAGGGTCCTGGAGGACACTGGGCCGGGACAGATCAGA +
Preference number: 5 (lower is better)
Translates to: GPLERGNGTRASTEA*GARVLEDTGPGQIR
Trigger: TCTGATCTGTCCCGGCCCAGTGTCCTCCAGGACCCTGGCCCCTCATGCCTCCGTGCTTGCGCGTGTGCCATTTCCTCTCTCCAGAGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586207.5
CDS GCA 90 bp AGCAAGCGTTGGGGTGCGTGTGGGACCGGCAGGGGTCTGCGGACGTaGCAGCGGGAGTGGAAATGGGAAACCGTTGACCCTGGTGATTCC +
Preference number: 5 (lower is better)
Translates to: SKRWGACGTGRGLRT*QREWKWETVDPGDS
Trigger: GGAATCACCAGGGTCAACGGTTTCCCATTTCCACTCCCGCTGGCACGTCCGCAGACCCCTGCCGGTCCCACACGCACCCCAACGCTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp GAGAAGACAGCAAGCGTTGGGGTGCGTGTGGGACCGGCAGGGGTCTaGGGACGTGCCAGCGGGAGTGGAAATGGGAAACCGTTGACCCTG +
Preference number: 5 (lower is better)
Translates to: EKTASVGVRVGPAGV*GRASGSGNGKPLTL
Trigger: CAGGGTCAACGGTTTCCCATTTCCACTCCCGCTGGCACGTCCGCAGACCCCTGCCGGTCCCACACGCACCCCAACGCTTGCTGTCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp TCACAGACTATGTGGTGCAAGCTGCCTCAGGAGGTCGCCTGCAGGTaGGCACGGAAGCGGCCGAGGTTGGGAAGACCCGTCCCCTCGTTC +
Preference number: 5 (lower is better)
Translates to: SQTMWCKLPQEVACR*ARKRPRLGRPVPSF
Trigger: GAACGAGGGGACGGGTCTTCCCAACCTCGGCCGCTTCCGTGCGCACCTGCAGGCGACCTCCTGAGGCAGCTTGCACCACATAGTCTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 90 bp GACAGGACTCCAGGGATCTGCCCACGGGTCTGGCCAGGACTGCGGTaGTGGGCTTGCTTCAGAGCAGTTCCCTCTCCTCCACGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: DRTPGICPRVWPGLR*WACFRAVPSPPRRS
Trigger: GCTTCTCCGTGGAGGAGAGGGAACTGCTCTGAAGCAAGCCCAGCACCGCAGTCCTGGCCAGACCCGTGGGCAGATCCCTGGAGTCCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676891.1
CDS GCA 90 bp GGCTGGGCCCAGGGTCCCCGTGCTGTATGCAACCTAGGGACTTGGTaGCCTGTGTCCCAGCCACACCAGAAGTGGCTGAAAGGGGCCAAC +
Preference number: 5 (lower is better)
Translates to: GWAQGPRAVCNLGTW*PVSQPHQKWLKGAN
Trigger: GTTGGCCCCTTTCAGCCACTTCTGGTGTGGCTGGGACACAGGGCACCAAGTCCCTAGGTTGCATACAGCACGGGGACCCTGGGCCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 90 bp GGTGCGTGTGGGACCGGCAGGGGTCTGCGGACGTGCCAGCGGGAGTaGAAATGGGAAACCGTTGACCCTGGTGATTCCACCCCGACACTT +
Preference number: 5 (lower is better)
Translates to: GACGTGRGLRTCQRE*KWETVDPGDSTPTL
Trigger: AAGTGTCGGGGTGGAATCACCAGGGTCAACGGTTTCCCATTTCCACTCCCGCTGGCACGTCCGCAGACCCCTGCCGGTCCCACACGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 90 bp ACGGAAGCGGCCGAGGTTGGGAAGACCCGTCCCCTCGTTCTTCCTTaGAGAGGCACCACAGCGGCGCTCCATCTCTTCACGCCGAAGCCA +
Preference number: 5 (lower is better)
Translates to: TEAAEVGKTRPLVLP*RGTTAALHLFTPKP
Trigger: TGGCTTCGGCGTGAAGAGATGGAGCGCCGCTGTGGTGCCTCTCCAAGGAAGAACGAGGGGACGGGTCTTCCCAACCTCGGCCGCTTCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CCA 90 bp GCCTCTGTGGGCCACCCTGTGGCCTCCACCCTGCCGTCAGGTCCATaGTCAGGGCAGCTTCCTAAGAGTGTGCCACTTTTCCTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: ASVGHPVASTLPSGP*SGQLPKSVPLFLGL
Trigger: GAGCCCGAGGAAAAGTGGCACACTCTTAGGAAGCTGCCCTGACCATGGACCTGACGGCAGGGTGGAGGCCACAGGGTGGCCCACAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CCA 90 bp TCCCAACTGAGTGAGCATGCTCTGTGGGCATCGCACCGTCCCAGGTaGAGCGCCGGGTATCCTCGGGTGACCGCCTCGAGCTCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: SQLSEHALWASHRPR*SAGYPRVTASSSKA
Trigger: TGCTTTGGAGCTCGAGGCGGTCACCCGAGGATACCCGGCGCTCCACCTGGGACGGTGCGATGCCCACAGAGCATGCTCACTCAGTTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679091.1
ENST00000679303.1
CDS-3UTR CAA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCCTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSLWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCCAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGT +
Preference number: 5 (lower is better)
Translates to: GSPSSRLRLWFGRLMKDRQLKCT*EGIRPG
Trigger: ACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTG...GCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR CAA 90 bp TCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTGCCATGCCAGAAAGTaGAAGATGCCCGGAGGCGGG +
Preference number: 5 (lower is better)
Translates to: SSRLRLWFGRLMKDRVETCHARK*KMPGGG
Trigger: CCCGCCTCCGGGCATCTTCAACTTTCTGGCATGGCA...AGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678459.1
CDS GCA 90 bp TACATGTCCCTGGCCTGCAGACATGGAGAGCAGACAGGGTCATCATaGCCAACAGGAAGCAGGCGGAGGCCCAGGAGCCACGAGGGCACG +
Preference number: 5 (lower is better)
Translates to: YMSLACRHGEQTGSS*PTGSRRRPRSHEGT
Trigger: CGTGCCCTCGTGGCTCCTGGGCCTCCGCCTGCTTCCTGTTGGGCATGATGACCCTGTCTGCTCTCCATGTCTGCAGGCCAGGGACATGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp GCGCAGGCAAGCGGGAGTTCTGGTTCCCACCCAGCTCTGCTCTCCTaGTCATGTTCTGCTTCCAGGGCCTCCTCAAGCCCAGTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: AQASGSSGSHPALLS*SCSASRASSSPVRL
Trigger: CAGCCTCACTGGGCTTGAGGAGGCCCTGGAAGCAGAACATGAGCAGGAGAGCAGAGCTGGGTGGGAACCAGAACTCCCGCTTGCCTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS GCA 90 bp CCTCCCTTCCTAGAGGGGCTCATGGAGAACAGAACATGGCTGCCCTaGCTGGATCCCTTCAGAGCCTCAGGCCCAGCTCAGGACCCTGCC +
Preference number: 5 (lower is better)
Translates to: PPFLEGLMENRTWLP*LDPFRASGPAQDPA
Trigger: GGCAGGGTCCTGAGCTGGGCCTGAGGCTCTGAAGGGATCCAGGCAGGGCAGCCATGTTCTGTTCTCCATGAGCCCCTCTAGGAAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677744.1
ENST00000678223.1
CDS GCA 90 bp GGCACTGTCACTGAGACCCCATGTCACAGACTATGTGGTGCAAGCTaGCTCAGGAGGTCGCCTGCAGGTGCGCACGGAAGCGGCCGAGGT +
Preference number: 5 (lower is better)
Translates to: GTVTETPCHRLCGAS*LRRSPAGAHGSGRG
Trigger: ACCTCGGCCGCTTCCGTGCGCACCTGCAGGCGACCTCCTGAGGCAGCTTGCACCACATAGTCTGTGACATGGGGTCTCAGTGACAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CCA 90 bp AGAGGCGCAAGTCCGCGCTCGCAGGTGGACGGCCCTTTCCGAGCCTaGGCTCAGGATCCTCCAGCGAGTGTCTTCTCCAGTCCACCTATT +
Preference number: 5 (lower is better)
Translates to: RGASPRSQVDGPFRA*AQDPPASVFSSPPI
Trigger: AATAGGTGGACTGGAGAAGACACTCGCTGGAGGATCCTGAGCCCAGGCTCGGAAAGGGCCGTCCACCTGCGAGCGCGGACTTGCGCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS-3UTR CAA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTCTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPLWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTGTACTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: PPPALVRAVDEGPRGDFVLWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...TACAAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677304.1
ENST00000678459.1
ENST00000678556.1
CDS-3UTR CAA 90 bp CAGGCGCGGCTACCTGATACCGGCCCAAGGCCAGGTGCCTTGGACGGCACGGGCGGCCAAGTAAACACCTaGGCAGGAATCCAGAAAACG +
Preference number: 5 (lower is better)
Translates to: QARLPDTGPRPGALDGTGGQVNT*AGIQKT
Trigger: CGTTTTCTGGATTCCTGCCAAGGTGTTTACTTGGCC...GCCCGTGCCGTCCAAGGCACCTGGCCTTGGGCCGGTATCAGGTAGCCGCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS TCA 90 bp TGTGGGCATCGCACCGTCCCAGGTGGAGCGCCGGGTATCCTCGGGTaGCCGCCTCGAGCTCCAAAGCAGTTTCAGGTGAACTCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: CGHRTVPGGAPGILG*PPRAPKQFQVNSAK
Trigger: CTTTGCTGAGTTCACCTGAAACTGCTTTGGAGCTCGAGGCGGTCACCCGAGGATACCCGGCGCTCCACCTGGGACGGTGCGATGCCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 90 bp GCGAGGGCTCTGGGCACCAGCCAGACTGTGTGGTTCCCTACAAACTaGCAGCCAGGGCCAAATCACCAGCACACTGGGGTGTCCCACTTC +
Preference number: 5 (lower is better)
Translates to: ARALGTSQTVWFPTN*QPGPNHQHTGVSHF
Trigger: GAAGTGGGACACCCCAGTGTGCTGGTGATTTGGCCCTGGCTGGCAGTTTGTAGGGAACCACACAGTCTGGCTGGTGCCCAGAGCCCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 90 bp CTCGCTCCCTTCCTCCCGGCTCAGTTGAAGATGCCCGGAGGCGGGTaGTCGGTCACCAGGAGACAGTTCTCTTCGTCACTGTTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: LAPFLPAQLKMPGGG*SVTRRQFSSSLLSP
Trigger: TGGGGACAACAGTGACGAAGAGAACTGTCTCCTGGTGACCGAGCACCCGCCTCCGGGCATCTTCAACTGAGCCGGGAGGAAGGGAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS CCA 90 bp TGTGGGACCGGCAGGGGTCTGCGGACGTGCCAGCGGGAGTGGAAATaGGAAACCGTTGACCCTGGTGATTCCACCCCGACACTTCCAACA +
Preference number: 5 (lower is better)
Translates to: CGTGRGLRTCQREWK*ETVDPGDSTPTLPT
Trigger: TGTTGGAAGTGTCGGGGTGGAATCACCAGGGTCAACGGTTTCCCATTTCCACTCCCGCTGGCACGTCCGCAGACCCCTGCCGGTCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 90 bp AGATCCAGCACTCCACTCCAAGGCAGGTTCTCCAGGACGCCACCCTaGCCTTGGCACAGCCATGGCTCTCCAGGGCCCCCTTCATTTCTC +
Preference number: 5 (lower is better)
Translates to: RSSTPLQGRFSRTPP*PWHSHGSPGPPSFL
Trigger: GAGAAATGAAGGGGGCCCTGGAGAGCCATGGCTGTGCCAAGGCCAGGGTGGCGTCCTGGAGAACCTGCCTTGGAGTGGAGTGCTGGATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS-3UTR CAA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASLWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTCCTGTGCTCCAACTCTaGCGCTGTCCCGTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPPVLQL*RCPVEE
Trigger: TTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGG...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTCCCACAGTCGTTCTGTaGGTTACAGACCAGCGAACC +
Preference number: 5 (lower is better)
Translates to: SSRLRLWFGRLMKDRVETPTVVL*VTDQRT
Trigger: GGTTCGCTGGTCTGTAACCAACAGAACGACTGTGGG...AGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CAA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTAACTCCAGCTCCGAGTaGAAGATGCCCGGAGGCGGG +
Preference number: 5 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLNSSSE*KMPGGG
Trigger: CCCGCCTCCGGGCATCTTCAACTCGGAGCTGGAGTT...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CAA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCGGCCGGGCTGGGTGCTaGTCGCTTCCTGTTTATTCC +
Preference number: 5 (lower is better)
Translates to: NPLQVPASRARWEHGLLIGRAGC*SLPVYS
Trigger: GGAATAAACAGGAAGCGACAAGCACCCAGCCCGGCC...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399848.7
CDS-3UTR CAA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTCACTGCGGCCTGCACTaGGATCTGGTCACCAGTGAC +
Preference number: 5 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAHCGLH*DLVTSD
Trigger: GTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGTG...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS TCA 90 bp TGCCGGGCCGGGCTGGGTGCTTGTCGCTTCCTGTTTATTCCAAGGTaGGGGGCAGAGAGAAATTCAACACACGCCTGCTTCCTCCGGGGC +
Preference number: 5 (lower is better)
Translates to: CRAGLGACRFLFIPR*GAERNSTHACFLRG
Trigger: GCCCCGGAGGAAGCAGGCGTGTGTTGAATTTCTCTCTGCCCCTCACCTTGGAATAAACAGGAAGCGACAAGCACCCAGCCCGGCCCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399848.7
ENST00000590115.1
ENST00000677055.1
CDS TCA 90 bp CTAAAACTGAAGCACCCAGCAGAGAGAACACAGCAAGTGGGCAGGTaGTCCCAGGCCACGCCCCGGGCCCAGCAGGGCACATCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: LKLKHPAERTQQVGR*SQATPRAQQGTSLF
Trigger: GAACAGAGATGTGCCCTGCTGGGCCCGGGGCGTGGCCTGGGATCACCTGCCCACTTGCTGTGTTCTCTCTGCTGGGTGCTTCAGTTTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 90 bp ACGGGCCCTGACCCACCTCCCACAACTCGGGGAAGGCACTGTCACTaGGACCCCATGTCACAGACTATGTGGTGCAAGCTGCCTCAGGAG +
Preference number: 5 (lower is better)
Translates to: TGPDPPPTTRGRHCH*DPMSQTMWCKLPQE
Trigger: CTCCTGAGGCAGCTTGCACCACATAGTCTGTGACATGGGGTCTCAGTGACAGTGCCTTCCCCGAGTTGTGGGAGGTGGGTCAGGGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS TCA 90 bp AGAGGGAGACATCTACACAGCTGCCAAGCTAACCAGCACGGGCCCTaGCCCACCTCCCACAACTCGGGGAAGGCACTGTCACTGAGACCC +
Preference number: 5 (lower is better)
Translates to: RGRHLHSCQANQHGP*PTSHNSGKALSLRP
Trigger: GGGTCTCAGTGACAGTGCCTTCCCCGAGTTGTGGGAGGTGGGTCAGGGCCCGTGCTGGTTAGCTTGGCAGCTGTGTAGATGTCTCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 90 bp GCATCCCCGACCCAACAGCAAGGGCCAGAGAGTCCTTCAGCCCAATaGCCACCTGTAAGTGTAGCACACCAGGGACAGGGGGCTAACCTG +
Preference number: 5 (lower is better)
Translates to: ASPTQQQGPESPSAQ*PPVSVAHQGQGANL
Trigger: CAGGTTAGCCCCCTGTCCCTGGTGTGCTACACTTACAGGTGGGCATTGGGCTGAAGGACTCTCTGGCCCTTGCTGTTGGGTCGGGGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp CACATGGCCCTGCCGGGACAGATGCCCTTCATGCTCCTTTCTGACTaGATCCCCGACCCAACAGCAAGGGCCAGAGAGTCCTTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: HMALPGQMPFMLLSD*IPDPTARARESFSP
Trigger: TGGGCTGAAGGACTCTCTGGCCCTTGCTGTTGGGTCGGGGATGCAGTCAGAAAGGAGCATGAAGGGCATCTGTCCCGGCAGGGCCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 90 bp GATGATTTGGGCGAACTCCAGCTCCGCTGCCATGGAAGAGGAGAGTaGTTAGCCACCTGGCCCCTCCAGTCCCCACCCATTCTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: DDLGELQLRCHGRGE*LATWPLQSPPILQA
Trigger: TGCCTGGAGAATGGGTGGGGACTGGAGGGGCCAGGTGGCTAACCACTCTCCTCTTCCATGGCAGCGGAGCTGGAGTTCGCCCAAATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361303.7
ENST00000435606.1
CDS CCA 90 bp GCGAACTCCAGCTCCGCATCAACTCCCTGGGTGGGCTTCGGCCCCTaGGTTCACCTCATTGCTGTCACACAGGGATGGCAAGGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: ANSSSASTPWVGFGP*VHLIAVTQGWQGAF
Trigger: AAAAGCCCCTTGCCATCCCTGTGTGACAGCAATGAGGTGAACCCAGGGGCCGAAGCCCACCCAGGGAGTTGATGCGGAGCTGGAGTTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS CCA 90 bp CGCTGCCGCCGCCCACTTCAAACTGGCGGTGGGTGTGCCAAACGATaGAAGAAAAACAGCTCCTCCACACCCACCAAGCCAGCGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RCRRPLQTGGGCAKR*KKNSSSTPTKPAKS
Trigger: GCTCTTCGCTGGCTTGGTGGGTGTGGAGGAGCTGTTTTTCTTCCATCGTTTGGCACACCCACCGCCAGTTTGAAGTGGGCGGCGGCAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 90 bp AGCCCTGGTAGAGAGGCGCTGCCGCCGCCCACTTCAAACTGGCGGTaGGTGTGCCAAACGATGGAAGAAAAACAGCTCCTCCACACCCAC +
Preference number: 5 (lower is better)
Translates to: SPGREALPPPTSNWR*VCQTMEEKQLLHTH
Trigger: GTGGGTGTGGAGGAGCTGTTTTTCTTCCATCGTTTGGCACACCCACCGCCAGTTTGAAGTGGGCGGCGGCAGCGCCTCTCTACCAGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS-3UTR CAA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: VGTPDQESTASPCQQGPMSNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPSNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAATCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAESNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTCCCACAGTCGTTCTGTaGGTTACAGACCAGCGAACC +
Preference number: 5 (lower is better)
Translates to: LPPPALVRAVDEGPRGDFPTVVL*VTDQRT
Trigger: GGTTCGCTGGTCTGTAACCAACAGAACGACTGTGGG...AAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CAA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTGGCCGGGCTGGGTGCTaGTCGCTTCCTGTTTATTCC +
Preference number: 5 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGGRAGC*SLPVYS
Trigger: GGAATAAACAGGAAGCGACAAGCACCCAGCCCGGCC...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399848.7
ENST00000677055.1
CDS-3UTR CAA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAACTGCACTTCTCAGGTTaGGCCTCACACCTGGACGTG +
Preference number: 5 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAELHFSG*ASHLDV
Trigger: CACGTCCAGGTGTGAGGCCAAACCTGAGAAGTGCAG...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS TCA 90 bp AGCTCACCATCAGCTGCAAGGGACTCTGCCTGGTGTCCCACAGGCTaGGTAAGGGTCTGCGGCCTTTCCCATGAGGGTGGGTCTAGATGG +
Preference number: 5 (lower is better)
Translates to: SSPSAARDSAWCPTG*VRVCGLSHEGGSRW
Trigger: CCATCTAGACCCACCCTCATGGGAAAGGCCGCAGACCCTTACTCAGCCTGTGGGACACCAGGCAGAGTCCCTTGCAGCTGATGGTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 90 bp GGACACCTGCTGGAGGGCCGCCCCAGTCAGTGGAGATCCCACTCCTaGGTAGGGTCTGACAATGCCCATTGGCCATCCTGTGGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: GHLLEGRPSQWRSHS*VGSDNAHWPSCGLF
Trigger: AAAAAGGCCACAGGATGGCCAATGGGCATTGTCAGACCCTACTCAGGAGTGGGATCTCCACTGACTGGGGCGGCCCTCCAGCAGGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677387.1
ENST00000678223.1
CDS CCA 90 bp ACTGGCACTCCTTCCGCTGACTCTGCTGCTCCGCGTTCTCCCTGGTaGAGCAGGCCCTGGTGGCTTCTGCTACATATCACCAGATTCCCT +
Preference number: 5 (lower is better)
Translates to: TGTPSADSAAPRSPW*SRPWWLLLHITRFP
Trigger: AGGGAATCTGGTGATATGTAGCAGAAGCCACCAGGGCCTGCTCCACCAGGGAGAACGCGGAGCAGCAGAGTCAGCGGAAGGAGTGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 90 bp GTGGTTCCCTACAAACTGCCAGCCAGGGCCAAATCACCAGCACACTaGGGTGTCCCACTTCTCCCCGCTCACTGCAAGACGAGTTCTGCC +
Preference number: 5 (lower is better)
Translates to: VVPYKLPARAKSPAH*GVPLLPAHCKTSSA
Trigger: GGCAGAACTCGTCTTGCAGTGAGCGGGGAGAAGTGGGACACCCCAGTGTGCTGGTGATTTGGCCCTGGCTGGCAGTTTGTAGGGAACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CCA 90 bp TCTCCTGTGTCTTGGGCGAGGGCTCTGGGCACCAGCCAGACTGTGTaGTTCCCTACAAACTGCCAGCCAGGGCCAAATCACCAGCACACT +
Preference number: 5 (lower is better)
Translates to: SPVSWARALGTSQTV*FPTNCQPGPNHQHT
Trigger: AGTGTGCTGGTGATTTGGCCCTGGCTGGCAGTTTGTAGGGAACCACACAGTCTGGCTGGTGCCCAGAGCCCTCGCCCAAGACACAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS-3UTR CAA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGACGATGATGATGATTaGGGCGAACTCCAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPDDDDD*GELQLR
Trigger: GCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTC...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGACGATGATGATGATTaGGGCGAACTCCAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPADDDDD*GELQLR
Trigger: GCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTC...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGACTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGLWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSSNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCSNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGACCAGGCTTCCTATCTTaGCCTTTGATGGGTACTATT +
Preference number: 5 (lower is better)
Translates to: PVLPPPALVRAVDEGPRGPGFLS*PLMGTI
Trigger: AATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGG...TCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR CAA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCCAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGT +
Preference number: 5 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSQLKCT*EGIRPG
Trigger: ACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTG...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACACTCCAGGATATTCCTaGGGCCTGATTACAATCCAC +
Preference number: 5 (lower is better)
Translates to: VLPPPALVRAVDEGPRGDTPGYS*GLITIH
Trigger: GTGGATTGTAATCAGGCCCAAGGAATATCCTGGAGT...GTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR CAA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCACGGGCTCCTCATCTTaGCCTGACAGAGGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: NPLQVPASRARWEHGLLITGSSS*PDRGRE
Trigger: CTCTCTTCCTCTGTCAGGCAAAGATGAGGAGCCCGT...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTACGGGCTCCTCATCTTaGCCTGACAGAGGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPTGSSS*PDRGRE
Trigger: CTCTCTTCCTCTGTCAGGCAAAGATGAGGAGCCCGT...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAACGGGCTCCTCATCTTaGCCTGACAGAGGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAETGSSS*PDRGRE
Trigger: CTCTCTTCCTCTGTCAGGCAAAGATGAGGAGCCCGT...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCAAGCACGCGGCATTCTaGGTCAGTGTGAGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: NPLQVPASRARWEHGLLIKHAAF*VSVSRR
Trigger: TCTCCTGCTCACACTGACCAAGAATGCCGCGTGCTT...GATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTGCAGGAGGGGGCGGCTaGGTTCCTATATCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFAGGGG*VPISAE
Trigger: TTCAGCAGATATAGGAACCAAGCCGCCCCCTCCTGC...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTCCTGTGCTCCAACTCTaGCGCTGTCCCGTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVPVLQL*RCPVEE
Trigger: TTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGG...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGCTGGTGCAGGTGAATTaGCACTCTGTGAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: SPSSRLRLWFGRLMKDRVLVQVN*HSVKAF
Trigger: AAATGCTTTCACAGAGTGCAAATTCACCTGCACCAG...CACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677304.1
ENST00000678459.1
CDS-3UTR CAA 90 bp AGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGACGCAAGGAAAGAAGTaGAGGCCAAAGTCAAACGTT +
Preference number: 5 (lower is better)
Translates to: SPSSRLRLWFGRLMKDRVTQGKK*RPKSNV
Trigger: AACGTTTGACTTTGGCCTCAACTTCTTTCCTTGCGT...CACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS TCA 90 bp TCAGTCACTGAACATCCACAAGGCGTGCGGTCTGGGTGTTCCCCGTaGGCTCTTTCCACCCCAGCTTCCCGAGAGCCAATCGATTGGGCA +
Preference number: 5 (lower is better)
Translates to: SVTEHPQGVRSGCSP*ALSTPASREPIDWA
Trigger: TGCCCAATCGATTGGCTCTCGGGAAGCTGGGGTGGAAAGAGCTCACGGGGAACACCCAGACCGCACGCCTTGTGGATGTTCAGTGACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 90 bp GATCCCAGCACTGGCCACCTTGGTGTCACTTCCCTGATAGCAACCTaGAAGGCCAGCAGAAGCTCTGACCCACAGCTTCCCCACTGCCCA +
Preference number: 5 (lower is better)
Translates to: DPSTGHLGVTSLIAT*KASRSSDPQLPHCP
Trigger: TGGGCAGTGGGGAAGCTGTGGGTCAGAGCTTCTGCTGGCCTTTCAGGTTGCTATCAGGGAAGTGACACCAAGGTGGCCAGTGCTGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 90 bp ATTTGGGCGAACTCCAGCTCCGAGTTGAAGATGCCCGGAGGCGGGTaGTCGGTCACCAGGAGACAGTTCTCTTCGTCACTGTTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: IWANSSSELKMPGGG*SVTRRQFSSSLLSP
Trigger: TGGGGACAACAGTGACGAAGAGAACTGTCTCCTGGTGACCGAGCACCCGCCTCCGGGCATCTTCAACTCGGAGCTGGAGTTCGCCCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676891.1
ENST00000679091.1
CDS GCA 90 bp AGCTTCCTAAAGGCTGTGCAGGGCAGACCCCTTCACAAAGGCAAGTaGCGGGCCGGGCTGGGTGCTTGTCGCTTCCTGTTTATTCCAAGG +
Preference number: 5 (lower is better)
Translates to: SFLKAVQGRPLHKGK*RAGLGACRFLFIPR
Trigger: CCTTGGAATAAACAGGAAGCGACAAGCACCCAGCCCGGCCCGGCACTTGCCTTTGTGAAGGGGTCTGCCCTGCACAGCCTTTAGGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399848.7
ENST00000590115.1
ENST00000677055.1
CDS GCA 90 bp CTCAGAATTCAGGATGACAGTACCCGGGAGGCTCGCATGTGTGGGTaGATGCCGTGGCAGGAGAAGGCTTCCGAAGAGCCATGCATGCGT +
Preference number: 5 (lower is better)
Translates to: LRIQDDSTREARMCG*MPWQEKASEEPCMR
Trigger: ACGCATGCATGGCTCTTCGGAAGCCTTCTCCTGCCACGGCATGCACCCACACATGCGAGCCTCCCGGGTACTGTCATCCTGAATTCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592657.1
CDS GCA 90 bp CTCAGGAGAGAGGAGAGAAACACACGAGCTCAGCAGTGGAGGAGCTaGCCCCACACAGAACCCAGGCGTGGTTTGCTCTGCCATGCATAC +
Preference number: 5 (lower is better)
Translates to: LRREERNTRAQQWRS*PHTEPRRGLLCHAY
Trigger: GTATGCATGGCAGAGCAAACCACGCCTGGGTTCTGTGTGGGGGCAGCTCCTCCACTGCTGAGCTCGTGTGTTTCTCTCCTCTCTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 90 bp TCTAACCATCCTCCCTTCCTAGAGGGGCTCATGGAGAACAGAACATaGCTGCCCTGCCTGGATCCCTTCAGAGCCTCAGGCCCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: SNHPPFLEGLMENRT*LPCLDPFRASGPAQ
Trigger: CTGAGCTGGGCCTGAGGCTCTGAAGGGATCCAGGCAGGGCAGCCATGTTCTGTTCTCCATGAGCCCCTCTAGGAAGGGAGGATGGTTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677744.1
ENST00000678223.1
CDS CCA 90 bp GCCACTCGCATCCTTCCTCTGTGCCCCTCAGGCCTGATGGTGTCCTaGCCATTCTGGGGACAAGAGCGTGGCCTGTTTCTAGCTAGACTT +
Preference number: 5 (lower is better)
Translates to: ATRILPLCPSGLMVS*PFWGQERGLFLARL
Trigger: AAGTCTAGCTAGAAACAGGCCACGCTCTTGTCCCCAGAATGGCCAGGACACCATCAGGCCTGAGGGGCACAGAGGAAGGATGCGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677387.1
ENST00000678223.1
CDS CCA 90 bp TTTGTCAGCCCTGGTAGAGAGGCGCTGCCGCCGCCCACTTCAAACTaGCGGTGGGTGTGCCAAACGATGGAAGAAAAACAGCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: FVSPGREALPPPTSN*RWVCQTMEEKQLLH
Trigger: GTGGAGGAGCTGTTTTTCTTCCATCGTTTGGCACACCCACCGCCAGTTTGAAGTGGGCGGCGGCAGCGCCTCTCTACCAGGGCTGACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 90 bp GTCTCCCCACAGGGACCACTGGTCTCACACTGGAAGACATCCGCATaGTCCCTGGTCTGCACCGGTGCCTTCAGATCCCTTAAGGACCAA +
Preference number: 5 (lower is better)
Translates to: VSPQGPLVSHWKTSA*SLVCTGAFRSLKDQ
Trigger: TTGGTCCTTAAGGGATCTGAAGGCACCGGTGCAGACCAGGGACCATGCGGATGTCTTCCAGTGTGAGACCAGTGGTCCCTGTGGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS-3UTR CAA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTGACGATGATGATGATTaGGGCGAACTCCAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGDDDDD*GELQLR
Trigger: GCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTC...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: PAAASLLGFFLQLKCTLELWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAACTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAELTDSR*SSICCS
Trigger: TGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAASNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTCAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGT +
Preference number: 5 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPQLKCT*EGIRPG
Trigger: ACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTG...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTGTGCTCTTCAGTCACTaGCCCCCTCCACTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSVLFSH*PPPLFS
Trigger: AGAGAACAGTGGAGGGGGCAAGTGACTGAAGAGCAC...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTGTGCTCTTCAGTCACTaGCCCCCTCCACTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLVLFSH*PPPLFS
Trigger: AGAGAACAGTGGAGGGGGCAAGTGACTGAAGAGCAC...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACCAACGCCATGAGCCGGTCCTTTGAGGGAGGGCTTCGGACTGGGTGCCGGGTGGACAACTCTTGGGGTTaGGAACAGTCTCTCCAGTTA +
Preference number: 5 (lower is better)
Translates to: TNAMSRSFEGGLRTGCRVDNSWG*EQSLQL
Trigger: TAACTGGAGAGACTGTTCCAAACCCCAAGAGTTGTC...CACCCGGCACCCAGTCCGAAGCCCTCCCTCAAAGGACCGGCTCATGGCGTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGGCCCCACTGTGTAAGTaGTATCTTCCCAGTCGCTAC +
Preference number: 5 (lower is better)
Translates to: VGTPDQESTASPCQQGPMAPLCK*YLPSRY
Trigger: GTAGCGACTGGGAAGATACAACTTACACAGTGGGGC...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCGGGATTCAAGATGCCTaGGGTCTCCTACACCGGGAA +
Preference number: 5 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCGIQDA*GLLHRE
Trigger: TTCCCGGTGTAGGAGACCCAAGGCATCTTGAATCCC...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTGGGATTCAAGATGCCTaGGGTCTCCTACACCGGGAA +
Preference number: 5 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFGIQDA*GLLHRE
Trigger: TTCCCGGTGTAGGAGACCCAAGGCATCTTGAATCCC...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGCTCTCTTGGGATTTCTaGTGGCTTGGGTGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: VGTPDQESTASPCQQGPMLSWDF*WLGCVS
Trigger: GGACACACACCCAAGCCACAAGAAATCCCAAGAGAG...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCTCCCCCATTTACTGTaGGCCCCTATTTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGLPHLL*APISCL
Trigger: GAGGCAGGAAATAGGGGCCAACAGTAAATGGGGGAG...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTCGTGGCATGAAGGCTaGGCTCCAAGCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSSWHEG*APSTGF
Trigger: AAAGCCAGTGCTTGGAGCCAAGCCTTCATGCCACGA...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGCAGGAGGGGGCGGCTaGGTTCCTATATCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: GPSGRFPSWFLSPAEVHVAGGGG*VPISAE
Trigger: TTCAGCAGATATAGGAACCAAGCCGCCCCCTCCTGC...AACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS TCA 90 bp AGGTGTCAGCATCTCCATCAGGGCAGAGAAGCCTTTGTTCTTCTTTaGGCAGCCCTTCCTGGTCTGGCCACATGGCCCTGCCGGGACAGA +
Preference number: 5 (lower is better)
Translates to: RCQHLHQGREAFVLL*AALPGLATWPCRDR
Trigger: TCTGTCCCGGCAGGGCCATGTGGCCAGACCAGGAAGGGCTGCTCAAAGAAGAACAAAGGCTTCTCTGCCCTGATGGAGATGCTGACACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp GATAGCTTGTATGCCGCCACCTCATCTCAGGACCTGTTTCTATCTTaGTCTCTCCTCTCCAAGGCAGTGGGATGCGAGGGCCCAGAGGGG +
Preference number: 5 (lower is better)
Translates to: DSLYAATSSQDLFLS*SLLSKAVGCEGPEG
Trigger: CCCCTCTGGGCCCTCGCATCCCACTGCCTTGGAGAGGAGAGAGCAAGATAGAAACAGGTCCTGAGATGAGGTGGCGGCATACAAGCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp TGGGTGTGTGTGCCCCACGTGAGCGTGCATGTGCAGGGTGCGTCTTaGAGAGCAGGAGGCTCAGGAACTAAGATCCAGACAGATCAACAG +
Preference number: 5 (lower is better)
Translates to: WVCVPHVSVHVQGAS*RAGGSGTKIQTDQQ
Trigger: CTGTTGATCTGTCTGGATCTTAGTTCCTGAGCCTCCTGCTCTGCAAGACGCACCCTGCACATGCACGCTCACGTGGGGCACACACACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp CAGAAATACAGTGCACCTCAGCTCACCATCAGCTGCAAGGGACTCTaGCTGGTGTCCCACAGGCTGAGTAAGGGTCTGCGGCCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: QKYSAPQLTISCKGL*LVSHRLSKGLRPFP
Trigger: TGGGAAAGGCCGCAGACCCTTACTCAGCCTGTGGGACACCAGGCAGAGTCCCTTGCAGCTGATGGTGAGCTGAGGTGCACTGTATTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp AGGCACACCCTTGTCAAAACAAACGCAGCCAGACAGGTCCACCACTaGAGAGCAGCTCCTGCCGCGACAAGCTCTGCTTCCCAGACATCA +
Preference number: 5 (lower is better)
Translates to: RHTLVKTNAARQVHH*RAAPAATSSASQTS
Trigger: TGATGTCTGGGAAGCAGAGCTTGTCGCGGCAGGAGCTGCTCTGCAGTGGTGGACCTGTCTGGCTGCGTTTGTTTTGACAAGGGTGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590115.1
CDS GCA 90 bp TTCCACCGGCCTCTCCTCCAGATGAGTCCTGGCTGCATTCAGAGCTaGACGGACCCCTGGCCTAGAGGTAAACTTGGGCAAAGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: FHRPLLQMSPGCIQS*TDPWPRGKLGQSRF
Trigger: AAACCTGCTTTGCCCAAGTTTACCTCTAGGCCAGGGGTCCGTGCAGCTCTGAATGCAGCCAGGACTCATCTGGAGGAGAGGCCGGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 90 bp TTTCTCCTCCTTTTCCACCGGCCTCTCCTCCAGATGAGTCCTGGCTaGATTCAGAGCTGCACGGACCCCTGGCCTAGAGGTAAACTTGGG +
Preference number: 5 (lower is better)
Translates to: FLLLFHRPLLQMSPG*IQSCTDPWPRGKLG
Trigger: CCCAAGTTTACCTCTAGGCCAGGGGTCCGTGCAGCTCTGAATGCAGCCAGGACTCATCTGGAGGAGAGGCCGGTGGAAAAGGAGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CCA 90 bp CAACACGGCCCTTTCCTAAGATACTCGGGGACATCCTGGAATCAGTaGCAAACGTATACGGCGGTCCAGCTGCTCGGAGACGAAGGGTGG +
Preference number: 5 (lower is better)
Translates to: QHGPFLRYSGTSWNQ*QTYTAVQLLGDEGW
Trigger: CCACCCTTCGTCTCCGAGCAGCTGGACCGCCGTATACGTTTGCCACTGATTCCAGGATGTCCCCGAGTATCTTAGGAAAGGGCCGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS CCA 90 bp CAGGAAGCCATTTGGGTCCGAGAGCTTTCACGGCAGCAGGGCAGATaGAGTGCCCAAAACAGGAGCCTCCTAGTCTCTGAAGAGCAAGCC +
Preference number: 5 (lower is better)
Translates to: QEAIWVRELSRQQGR*SAQNRSLLVSEEQA
Trigger: GGCTTGCTCTTCAGAGACTAGGAGGCTCCTGTTTTGGGCACTCCATCTGCCCTGCTGCCGTGAAAGCTCTCGGACCCAAATGGCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 90 bp TCATTGTTCCAGTGTGTCTCCCCACAGGGACCACTGGTCTCACACTaGAAGACATCCGCATGGTCCCTGGTCTGCACCGGTGCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: SLFQCVSPQGPLVSH*KTSAWSLVCTGAFR
Trigger: TCTGAAGGCACCGGTGCAGACCAGGGACCATGCGGATGTCTTCCAGTGTGAGACCAGTGGTCCCTGTGGGGAGACACACTGGAACAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS-3UTR CAA 90 bp CTCACGGACTCTCGGTTGAGTTCCATCTGCTGTTCAGGGTCCCGGAGCTGCAGGCTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LTDSRLSSICCSGSRSCRLTDSR*SSICCS
Trigger: TGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG...CCTGCAGCTCCGGGACCCTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CAA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGLTDSR*SSICCS
Trigger: TGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLLTDSR*SSICCS
Trigger: TGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGT +
Preference number: 5 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLQLKCT*EGIRPG
Trigger: ACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTG...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGT +
Preference number: 5 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSQLKCT*EGIRPG
Trigger: ACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTG...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCTTCCTGCGGCAGCCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGTCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: PSCGSPSSRLRLWFGRLMSFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...CATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCGCAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR CAA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSTQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTGTGCTCTTCAGTCACTaGCCCCCTCCACTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAAVLFSH*PPPLFS
Trigger: AGAGAACAGTGGAGGGGGCAAGTGACTGAAGAGCAC...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTGGCCTGAGGACATATTaGAAGTGCTCTGCACCAGAG +
Preference number: 5 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSGLRTY*KCSAPE
Trigger: CTCTGGTGCAGAGCACTTCAAATATGTCCTCAGGCC...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp ACGACGATGATGATGATTTGGGCGAACTCCAGCTCCGTAACAGCGATGGAGCCGCCTGTGCTCCAACTCTaGCGCTGTCCCGTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: TTMMMIWANSSSVTAMEPPVLQL*RCPVEE
Trigger: TTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGG...CGGCTCCATCGCTGTTACGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR CAA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGACCTGTGCTCCAACTCTaGCGCTGTCCCGTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGPVLQL*RCPVEE
Trigger: TTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGG...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCAACTCCAGCTCCGAGTaGAAGATGCCCGGAGGCGGG +
Preference number: 5 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGNSSSE*KMPGGG
Trigger: CCCGCCTCCGGGCATCTTCAACTCGGAGCTGGAGTT...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CAA 90 bp AACAGCAGCACCCCACCTCACTCCCCTACGTGCTGGCCTTTCCTGGAGCACCAATCCTTCAGTGTGCTGTaGTTCAGGTGGTCACTGGAC +
Preference number: 5 (lower is better)
Translates to: NSSTPPHSPTCWPFLEHQSFSVL*FRWSLD
Trigger: GTCCAGTGACCACCTGAACAACAGCACACTGAAGGA...TTGGTGCTCCAGGAAAGGCCAGCACGTAGGGGAGTGAGGTGGGGTGCTGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS TCA 90 bp GAAGGCCACAGGCACCCTTCCTGTGTGCTTGAAATACATTCAAGATaGCTGTCCAACCGCATTCAGTGGCCGCCCGATGAGGGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: EGHRHPSCVLEIHSR*LSNRIQWPPDEGRL
Trigger: CAGCCTGCCCTCATCGGGCGGCCACTGAATGCGGTTGGACAGTCATCTTGAATGTATTTCAAGCACACAGGAAGGGTGCCTGTGGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS TCA 90 bp ACAGGGCGAAGAGCACTGCGGCCTGCACTTGGATCTGGTCACCAGTaGCATCGTCCAGTCCTCGGCTTCTCTATAACTTACGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: TGRRALRPALGSGHQ*HRPVLGFSITYEDR
Trigger: CCTGTCCTCGTAAGTTATAGAGAAGCCGAGGACTGGACGATGTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGTGCTCTTCGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS TCA 90 bp TTTTGTCCATTCCATACAACCTGTCACTGGCATCCCCATCCCAACTaGGTGAGCATGCTCTGTGGGCATCGCACCGTCCCAGGTGGAGCG +
Preference number: 5 (lower is better)
Translates to: FCPFHTTCHWHPHPN*VSMLCGHRTVPGGA
Trigger: CGCTCCACCTGGGACGGTGCGATGCCCACAGAGCATGCTCACTCAGTTGGGATGGGGATGCCAGTGACAGGTTGTATGGAATGGACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679091.1
ENST00000679303.1
CDS GCA 90 bp AAATGCTGTGGCTCCGACCGCAGACTGTGGCTACCAATTATCAACTaGCATCAACAGAAACCAGGAGCTCTGCGGCAGGAAGCCGGCCGT +
Preference number: 5 (lower is better)
Translates to: KCCGSDRRLWLPIIN*HQQKPGALRQEAGR
Trigger: ACGGCCGGCTTCCTGCCGCAGAGCTCCTGGTTTCTGTTGATGGCAGTTGATAATTGGTAGCCACAGTCTGCGGTCGGAGCCACAGCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS GCA 90 bp ATTAAGCCCTGCCATGCCAGAAAGTTGAAGATGCCCGGAGGCGGGTaGTCGGTCACCAGGAGACAGTTCTCTTCGTCACTGTTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: IKPCHARKLKMPGGG*SVTRRQFSSSLLSP
Trigger: TGGGGACAACAGTGACGAAGAGAACTGTCTCCTGGTGACCGAGCACCCGCCTCCGGGCATCTTCAACTTTCTGGCATGGCAGGGCTTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678459.1
CDS CCA 90 bp GCGTTTGTCCAACACGGCCCTTTCCTAAGATACTCGGGGACATCCTaGAATCAGTGGCAAACGTATACGGCGGTCCAGCTGCTCGGAGAC +
Preference number: 5 (lower is better)
Translates to: AFVQHGPFLRYSGTS*NQWQTYTAVQLLGD
Trigger: GTCTCCGAGCAGCTGGACCGCCGTATACGTTTGCCACTGATTCCAGGATGTCCCCGAGTATCTTAGGAAAGGGCCGTGTTGGACAAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS CCA 90 bp TCCGCTGACTCTGCTGCTCCGCGTTCTCCCTGGTGGAGCAGGCCCTaGTGGCTTCTGCTACATATCACCAGATTCCCTTCTGATGATGAT +
Preference number: 5 (lower is better)
Translates to: SADSAAPRSPWWSRP*WLLLHITRFPSDDD
Trigger: ATCATCATCAGAAGGGAATCTGGTGATATGTAGCAGAAGCCACCAGGGCCTGCTCCACCAGGGAGAACGCGGAGCAGCAGAGTCAGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 90 bp AGGAACTCCAAGAGTCACAGGGCGAAGAGCACTGCGGCCTGCACTTaGATCTGGTCACCAGTGACATCGTCCAGTCCTCGGCTTCTCTAT +
Preference number: 5 (lower is better)
Translates to: RNSKSHRAKSTAACT*IWSPVTSSSPRLLY
Trigger: ATAGAGAAGCCGAGGACTGGACGATGTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGTGCTCTTCGCCCTGTGACTCTTGGAGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS CCA 90 bp GCCAGGATCCAAATTCAAAATCTCCTGTGTCTTGGGCGAGGGCTCTaGGCACCAGCCAGACTGTGTGGTTCCCTACAAACTGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ARIQIQNLLCLGRGL*APARLCGSLQTASQ
Trigger: CTGGCTGGCAGTTTGTAGGGAACCACACAGTCTGGCTGGTGCCCAGAGCCCTCGCCCAAGACACAGGAGATTTTGAATTTGGATCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS-3UTR CAA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGCTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKLWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCCTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSLWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGCTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLLTDSR*SSICCS
Trigger: TGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCCGTCCTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAAGACCAGATGGAAGTTaGTATCATTTCAGTCTAGTT +
Preference number: 5 (lower is better)
Translates to: PVLPPPALVRAVDEGPRGRPDGS*YHFSLV
Trigger: AACTAGACTGAAATGATACAAACTTCCATCTGGTCT...TCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR CAA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAACTGACTGTCCAGTTCTaGCCTTCAGTACAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAELTVQF*PSVQKL
Trigger: CAGCTTTTGTACTGAAGGCAAGAACTGGACAGTCAG...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAAGGATCAGACAACTCTaGGGGTTTGGAACAGTCTCT +
Preference number: 5 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPRIRQL*GFGTVS
Trigger: AGAGACTGTTCCAAACCCCAAGAGTTGTCTGATCCT...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTCCACCTGTCATTCAATaGTCCTTTCACCTCAGTAGG +
Preference number: 5 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPPPVIQ*SFHLSR
Trigger: CCTACTGAGGTGAAAGGACAATTGAATGACAGGTGG...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAACCACCTGTCATTCAATaGTCCTTTCACCTCAGTAGG +
Preference number: 5 (lower is better)
Translates to: AQEGPSGRFPSWFLSPAEPPVIQ*SFHLSR
Trigger: CCTACTGAGGTGAAAGGACAATTGAATGACAGGTGG...TTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCTTCAGTGTGCTGTaGTTCAGGTGGTCACTGGAC +
Preference number: 5 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAASFSVL*FRWSLD
Trigger: GTCCAGTGACCACCTGAACAACAGCACACTGAAGGA...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR CAA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGGCTCGCTCTTCCCTCTaGGCTCTCCCATTCATTCCC +
Preference number: 5 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRARSSL*ALPFIP
Trigger: GGGAATGAATGGGAGAGCCAAGAGGGAAGAGCGAGC...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS TCA 90 bp ATGATTTGGGCGAACTCCAGCTCCGCTGTGAAAGCATTTGTGGCCTaGAAACCAGCTTCCGGCATACTGCTCCCCGGACAAGCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: MIWANSSSAVKAFVA*KPASGILLPGQACA
Trigger: AGCACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTTCACAGCGGAGCTGGAGTTCGCCCAAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677055.1
ENST00000679167.1
ENST00000679177.1
CDS GCA 90 bp CTCTCTACTGTATCAGCAGGGCCCACCCCAGGTGCTAGACTCAAATaGTGTGGCTCCGACCGCAGACTGTGGCTACCAATTATCAACTGC +
Preference number: 5 (lower is better)
Translates to: LSTVSAGPTPGARLK*CGSDRRLWLPIINC
Trigger: GCAGTTGATAATTGGTAGCCACAGTCTGCGGTCGGAGCCACAGCATTTGAGTCTAGCACCTGGGGTGGGCCCTGCTGATACAGTAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS GCA 90 bp GTGGAAAAGGGGCAGCTCCAAGCAGTAATAGTTATGCCAGCACTGTaGCAGCCAGACACCTGGAGAGCAAAGCACAGGCCCACAAAGCAG +
Preference number: 5 (lower is better)
Translates to: VEKGQLQAVIVMPAL*QPDTWRAKHRPTKQ
Trigger: CTGCTTTGTGGGCCTGTGCTTTGCTCTCCAGGTGTCTGGCTGGCACAGTGCTGGCATAACTATTACTGCTTGGAGCTGCCCCTTTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp GTCATGCCGTACCATGGAACTGATGCCCTATACATGTCCCTGGCCTaGAGACATGGAGAGCAGACAGGGTCATCATGCCCAACAGGAAGC +
Preference number: 5 (lower is better)
Translates to: VMPYHGTDALYMSLA*RHGEQTGSSCPTGS
Trigger: GCTTCCTGTTGGGCATGATGACCCTGTCTGCTCTCCATGTCTGCAGGCCAGGGACATGTATAGGGCATCAGTTCCATGGTACGGCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp AAATCCCTGTGGCAGAAATACAGTGCACCTCAGCTCACCATCAGCTaGAAGGGACTCTGCCTGGTGTCCCACAGGCTGAGTAAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: KSLWQKYSAPQLTIS*KGLCLVSHRLSKGL
Trigger: CAGACCCTTACTCAGCCTGTGGGACACCAGGCAGAGTCCCTTGCAGCTGATGGTGAGCTGAGGTGCACTGTATTTCTGCCACAGGGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp CCACCCTGCCGTCAGGTCCATGGTCAGGGCAGCTTCCTAAGAGTGTaGCACTTTTCCTCGGGCTCTTTTTGTCCCATGCTCACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: PPCRQVHGQGSFLRV*HFSSGSFCPMLTSF
Trigger: AAAGGAAGTGAGCATGGGACAAAAAGAGCCCGAGGAAAAGTGGCACACTCTTAGGAAGCTGCCCTGACCATGGACCTGACGGCAGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CCA 90 bp CTCCTCCAGATGAGTCCTGGCTGCATTCAGAGCTGCACGGACCCCTaGCCTAGAGGTAAACTTGGGCAAAGCAGGTTTTACAGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: LLQMSPGCIQSCTDP*PRGKLGQSRFYSEH
Trigger: GTGCTCACTGTAAAACCTGCTTTGCCCAAGTTTACCTCTAGGCCAGGGGTCCGTGCAGCTCTGAATGCAGCCAGGACTCATCTGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CCA 90 bp GGAGACAGGCACATCCTGCAGTTAACGCAAAGCTCTAGGCCTCCTTaGGCCCTCCCAGGCAAGCAGACAGAAAGCAGAAGAAGGCAATAC +
Preference number: 5 (lower is better)
Translates to: GDRHILQLTQSSRPP*ALPGKQTESRRRQY
Trigger: GTATTGCCTTCTTCTGCTTTCTGTCTGCTTGCCTGGGAGGGCCCAAGGAGGCCTAGAGCTTTGCGTTAACTGCAGGATGTGCCTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 90 bp CACAGGGACCACTGGTCTCACACTGGAAGACATCCGCATGGTCCCTaGTCTGCACCGGTGCCTTCAGATCCCTTAAGGACCAAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: HRDHWSHTGRHPHGP*SAPVPSDPLRTKKK
Trigger: TTTCTTCTTGGTCCTTAAGGGATCTGAAGGCACCGGTGCAGACCAGGGACCATGCGGATGTCTTCCAGTGTGAGACCAGTGGTCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 90 bp CATACAGTTCAGGCTGTGACTTCAGAGGGTGGAAGCCCCAAGCCTTaGCAGCTTCCACATGGTGTTGAGCCTGCGGGTACACAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: HTVQAVTSEGGSPKP*QLPHGVEPAGTQKS
Trigger: TGACTTCTGTGTACCCGCAGGCTCAACACCATGTGGAAGCTGCCAAGGCTTGGGGCTTCCACCCTCTGAAGTCACAGCCTGAACTGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS-3UTR CAA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTC +
Preference number: 5 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSFLSLP*MGTIVL
Trigger: GAGCACAATAGTACCCATCAAAGGCAAAGATAGGAA...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGCCAGGCTTCCTATCTTaGCCTTTGATGGGTACTATT +
Preference number: 5 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWPGFLS*PLMGTI
Trigger: AATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGG...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGACAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGT +
Preference number: 5 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGQLKCT*EGIRPG
Trigger: ACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTG...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CTCCCGCCTCCGGCTCTGGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACTTTTCTCCACTTTATACCTaGGCACACAACACAGGAATT +
Preference number: 5 (lower is better)
Translates to: LPPPALVRAVDEGPRGDFSPLYT*AHNTGI
Trigger: AATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGA...AAAGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS-3UTR CAA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGTQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACTCCAGGATATTCCTaGGGCCTGATTACAATCCAC +
Preference number: 5 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCTPGYS*GLITIH
Trigger: GTGGATTGTAATCAGGCCCAAGGAATATCCTGGAGT...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CTCACGGACTCTCGGTTGAGTTCCATCTGCTGTTCAGGGTCCCGGAGCTGCAGGGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: LTDSRLSSICCSGSRSCRAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...CCTGCAGCTCCGGGACCCTGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CAA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCTGACTGTCCAGTTCTaGCCTTCAGTACAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVLTVQF*PSVQKL
Trigger: CAGCTTTTGTACTGAAGGCAAGAACTGGACAGTCAG...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTGACTGTCCAGTTCTaGCCTTCAGTACAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLLTVQF*PSVQKL
Trigger: CAGCTTTTGTACTGAAGGCAAGAACTGGACAGTCAG...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTGACAACTCTTGGGGTTaGGAACAGTCTCTCCAGTTA +
Preference number: 5 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSDNSWG*EQSLQL
Trigger: TAACTGGAGAGACTGTTCCAAACCCCAAGAGTTGTC...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTAGGATCAGACAACTCTaGGGGTTTGGAACAGTCTCT +
Preference number: 5 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFRIRQL*GFGTVS
Trigger: AGAGACTGTTCCAAACCCCAAGAGTTGTCTGATCCT...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTAGGGTGTCTCCAGGGTaGGGGAGGGTCCTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCRVSPG*GRVLLA
Trigger: GGCCAGAAGGACCCTCCCCAACCCTGGAGACACCCT...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CATTTTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCAGGGTGTCTCCAGGGTaGGGGAGGGTCCTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: HFNCMLCFLPGALQSLAPRVSPG*GRVLLA
Trigger: GGCCAGAAGGACCCTCCCCAACCCTGGAGACACCCT...GGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTAGTTCTCTAGGGTGGTaGAATGGGAGGAGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: PTLHMAECTADKPFSTRSSSLGW*NGRSLF
Trigger: AAAGAGGCTCCTCCCATTCAACCACCCTAGAGAACT...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCTGAGAGCTGGTGTCTCTCCAGCAGAGGCCTTCCAACTGTCACTGGAACAAGAGGGATTCAAGATGCCTaGGGTCTCCTACACCGGGAA +
Preference number: 5 (lower is better)
Translates to: PESWCLSSRGLPTVTGTRGIQDA*GLLHRE
Trigger: TTCCCGGTGTAGGAGACCCAAGGCATCTTGAATCCC...TCTTGTTCCAGTGACAGTTGGAAGGCCTCTGCTGGAGAGACACCAGCTCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACCAACGCCATGAGCCGGTCCTTTGAGGGAGGGCTTCGGACTGGGTGCCGGGTGACGTATGCTGGAAGATaGTGTTCTTATAGATGGGAT +
Preference number: 5 (lower is better)
Translates to: TNAMSRSFEGGLRTGCRVTYAGR*CSYRWD
Trigger: ATCCCATCTATAAGAACACAATCTTCCAGCATACGT...CACCCGGCACCCAGTCCGAAGCCCTCCCTCAAAGGACCGGCTCATGGCGTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGAGGGTGAGGACATGCTaGTCAAGCTTCTGTATTAGT +
Preference number: 5 (lower is better)
Translates to: VGTPDQESTASPCQQGPMRVRTC*SSFCIS
Trigger: ACTAATACAGAAGCTTGACAAGCATGTCCTCACCCT...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGATCGTGGCATGAAGGCTaGGCTCCAAGCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGSWHEG*APSTGF
Trigger: AAAGCCAGTGCTTGGAGCCAAGCCTTCATGCCACGA...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp CCCACCCTCCACATGGCAGAGTGTACTGCAGATAAGCCCTTCTCCACGCGCAGTGTGCACTTTTCACTGTaGCCTGACACCTTCGTGATG +
Preference number: 5 (lower is better)
Translates to: PTLHMAECTADKPFSTRSVHFSL*PDTFVM
Trigger: CATCACGAAGGTGTCAGGCAACAGTGAAAAGTGCAC...ACTGCGCGTGGAGAAGGGCTTATCTGCAGTACACTCTGCCATGTGGAGGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GCCCTCAAAGACCCTATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTTGTCTCTCACTTTCTTaGGCTCTCTATCTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: ALKDPIMGQGARSGPLMRCLSLS*ALYLSE
Trigger: CTCTGAGAGATAGAGAGCCAAAGAAAGTGAGAGACA...ACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATAGGGTCTTTGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CAA 90 bp TTCCTTGGAGGTGGGTTGGCTACTCTACTGTATAGTACAACAAGTAGAACGAAACCAAGGCCAGGTGCCTaGGACGGCACGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: FLGGGLATLLYSTTSRTKPRPGA*DGTGRR
Trigger: CCGCCTGCCCGTGCCGTCCAAGGCACCTGGCCTTGG...TTTCGTTCTACTTGTTGTACTATACAGTAGAGTAGCCAACCCACCTCCAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CAA 90 bp TATCATGGGTCAGGGGGCAAGGTCTGGGCCCCTCATGCGTTCCTCTCTTTCCCCGATCCACGCAGAACATaGCAATGTCACAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: YHGSGGKVWAPHAFLSFPDPRRT*QCHRNG
Trigger: GCCATTTCTGTGACATTGCAATGTTCTGCGTGGATC...GGGGAAAGAGAGGAACGCATGAGGGGCCCAGACCTTGCCCCCTGACCCATGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CAA 90 bp GAGTCACAGGGCGAAGAGCACTGCGGCCTGCACTTGGATCTGGTCACCAGTGACGTGTGCATTTTCCCCTaGGAAACAGAACACACTAGG +
Preference number: 5 (lower is better)
Translates to: ESQGEEHCGLHLDLVTSDVCIFP*ETEHTR
Trigger: CCTAGTGTGTTCTGTTTCCAAGGGGAAAATGCACAC...GTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGTGCTCTTCGCCCTGTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS TCA 90 bp CCAATGAGCCAAGGATGTGCAAAAATGCACATCCTGCCATCTCCCTaGCAAGCCTGGCCCTCCTCCAGAATGGGCCATGCTGCATGCTTT +
Preference number: 5 (lower is better)
Translates to: PMSQGCAKMHILPSP*QAWPSSRMGHAACF
Trigger: AAAGCATGCAGCATGGCCCATTCTGGAGGAGGGCCAGGCTTGTCAGGGAGATGGCAGGATGTGCATTTTTGCACATCCTTGGCTCATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 90 bp ACAGGGGGTGCAGAAGCTTTAGCTGGACTCTCCCTGCCATGCCAATaGGCCAAGGATGTGCAAAAATGCACATCCTGCCATCTCCCTGAC +
Preference number: 5 (lower is better)
Translates to: TGGAEALAGLSLPCQ*AKDVQKCTSCHLPD
Trigger: GTCAGGGAGATGGCAGGATGTGCATTTTTGCACATCCTTGGCTCATTGGCATGGCAGGGAGAGTCCAGCTAAAGCTTCTGCACCCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 90 bp GGCTCATTGACAAGAGGAGGGCCTAGTAGGCTCCTGCGGAAATCCTaGAGGCTTGGGAGATGCTGTCCACCTAACTTGCGATGGGAAATG +
Preference number: 5 (lower is better)
Translates to: GSLTRGGPSRLLRKS*RLGRCCPPNLRWEM
Trigger: CATTTCCCATCGCAAGTTAGGTGGACAGCATCTCCCAAGCCTTCAGGATTTCCGCAGGAGCCTACTAGGCCCTCCTCTTGTCAATGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS TCA 90 bp GTTAATACTGCAGCCACTCCACCGGATTACAGCAATGCTGGGCTGTaGAAGGACGTCCCTTCCGGCAGAGGCAACTCGGAACCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: VNTAATPPDYSNAGL*KDVPSGRGNSEPEE
Trigger: TTCTTCTGGTTCCGAGTTGCCTCTGCCGGAAGGGACGTCCTTTCACAGCCCAGCATTGCTGTAATCCGGTGGAGTGGCTGCAGTATTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677387.1
ENST00000678223.1
CDS TCA 90 bp CTCCGCACGTGGCAGGAATGGTGTGGGACAGAGAAGCACGTTCAGTaGCTCCACAGGAAAGCAGCCAGCAAAATCCAGAGTACGGAAACT +
Preference number: 5 (lower is better)
Translates to: LRTWQEWCGTEKHVQ*LHRKAASKIQSTET
Trigger: AGTTTCCGTACTCTGGATTTTGCTGGCTGCTTTCCTGTGGAGTCACTGAACGTGCTTCTCTGTCCCACACCATTCCTGCCACGTGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678309.1
CDS TCA 90 bp AGGCTGAAGAACTCAGAAACTCTTTCAGAAGCCAAGGGAGACCCCTaGATAGAACCCCCAAACCTGGGATCCCTCCCAGGATCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: RLKNSETLSEAKGDP*IEPPNLGSLPGSQH
Trigger: GTGCTGGGATCCTGGGAGGGATCCCAGGTTTGGGGGTTCTATTCAGGGGTCTCCCTTGGCTTCTGAAAGAGTTTCTGAGTTCTTCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 90 bp AATATCGTCCAGAGACAGAGGCCCAGATCTAAAGGGGACAGGGGGTaGAGAAGCTTTAGCTGGACTCTCCCTGCCATGCCAATGAGCCAA +
Preference number: 5 (lower is better)
Translates to: NIVQRQRPRSKGDRG*RSFSWTLPAMPMSQ
Trigger: TTGGCTCATTGGCATGGCAGGGAGAGTCCAGCTAAAGCTTCTGCACCCCCTGTCCCCTTTAGATCTGGGCCTCTGTCTCTGGACGATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp CAAAACAAACGCAGCCAGACAGGTCCACCACTGCAGAGCAGCTCCTaGCGCGACAAGCTCTGCTTCCCAGACATCATCACAAAGAACAGT +
Preference number: 5 (lower is better)
Translates to: QNKRSQTGPPLQSSS*RDKLCFPDIITKNS
Trigger: ACTGTTCTTTGTGATGATGTCTGGGAAGCAGAGCTTGTCGCGGCAGGAGCTGCTCTGCAGTGGTGGACCTGTCTGGCTGCGTTTGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590115.1
CDS GCA 90 bp CTCAAGCCCAGTGAGGCTGGGCCTTTTGTGGGTCACCCCGGCAGATaGCAAGACCTTCCCAGACACAACACAGATTTGAAACAGGATTTC +
Preference number: 5 (lower is better)
Translates to: LKPSEAGPFVGHPGR*QDLPRHNTDLKQDF
Trigger: GAAATCCTGTTTCAAATCTGTGTTGTGTCTGGGAAGGTCTTGGCATCTGCCGGGGTGACCCACAAAAGGCCCAGCCTCACTGGGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS GCA 90 bp AGTCCTCGGCTTCTCTATAACTTACGAGGACAGGACAGGGCTGCCTaGTTTCTCAGGTCCCTGCCAGCTCTAGAACTTAGAACCTCCGAG +
Preference number: 5 (lower is better)
Translates to: SPRLLYNLRGQDRAA*FLRSLPALELRTSE
Trigger: CTCGGAGGTTCTAAGTTCTAGAGCTGGCAGGGACCTGAGAAAGCAGGCAGCCCTGTCCTGTCCTCGTAAGTTATAGAGAAGCCGAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS GCA 90 bp GAACCGCTGCCCACCATCCTGTTAGGAGAGTGTCCTCCCAGCTGGTaGTTCAGATTTTGTCCATTCCATACAACCTGTCACTGGCATCCC +
Preference number: 5 (lower is better)
Translates to: EPLPTILLGECPPSW*FRFCPFHTTCHWHP
Trigger: GGGATGCCAGTGACAGGTTGTATGGAATGGACAAAATCTGAAGCACCAGCTGGGAGGACACTCTCCTAACAGGATGGTGGGCAGCGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679091.1
ENST00000679303.1
CDS GCA 90 bp GGACCACTGGTCTCACACTGGAAGACATCCGCATGGTCCCTGGTCTaGACCGGTGCCTTCAGATCCCTTAAGGACCAAGAAGAAAACCAA +
Preference number: 5 (lower is better)
Translates to: GPLVSHWKTSAWSLV*TGAFRSLKDQEENQ
Trigger: TTGGTTTTCTTCTTGGTCCTTAAGGGATCTGAAGGCACCGGTGCAGACCAGGGACCATGCGGATGTCTTCCAGTGTGAGACCAGTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 90 bp CTTTTGCTTCTTCCTCATTCTCTCTTGCTGCCGCCATGTAAGAAGTaGCTTTCGCCTCCCGTCATGATTCTGAGGCCTCCCCAGCCATGC +
Preference number: 5 (lower is better)
Translates to: LLLLPHSLLLPPCKK*LSPPVMILRPPQPC
Trigger: GCATGGCTGGGGAGGCCTCAGAATCATGACGGGAGGCGAAAGGCACTTCTTACATGGCGGCAGCAAGAGAGAATGAGGAAGAAGCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 90 bp ACAGACAGCCTGTACCGTGTGCCTGGAAAAGACACAGACACTCAATaGCAGCATGTGCAAGCAGCCAGGAGGAAGGCTGTACCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: TDSLYRVPGKDTDTQ*QHVQAARRKAVPCK
Trigger: TTTGCAGGGTACAGCCTTCCTCCTGGCTGCTTGCACATGCTGGCATTGAGTGTCTGTGTCTTTTCCAGGCACACGGTACAGGCTGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 90 bp TCCAAGAGTCACAGGGCGAAGAGCACTGCGGCCTGCACTTGGATCTaGTCACCAGTGACATCGTCCAGTCCTCGGCTTCTCTATAACTTA +
Preference number: 5 (lower is better)
Translates to: SKSHRAKSTAACTWI*SPVTSSSPRLLYNL
Trigger: TAAGTTATAGAGAAGCCGAGGACTGGACGATGTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGTGCTCTTCGCCCTGTGACTCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR CAA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGTTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTC +
Preference number: 5 (lower is better)
Translates to: VGTPDQESTASPCQQGPMFLSLP*MGTIVL
Trigger: GAGCACAATAGTACCCATCAAAGGCAAAGATAGGAA...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTC +
Preference number: 5 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPFLSLP*MGTIVL
Trigger: GAGCACAATAGTACCCATCAAAGGCAAAGATAGGAA...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTTTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTC +
Preference number: 5 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAFLSLP*MGTIVL
Trigger: GAGCACAATAGTACCCATCAAAGGCAAAGATAGGAA...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCATTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTC +
Preference number: 5 (lower is better)
Translates to: HCAQEGPSGRFPSWFLSPFLSLP*MGTIVL
Trigger: GAGCACAATAGTACCCATCAAAGGCAAAGATAGGAA...TGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGGCTTCCTATCTTaGCCTTTGATGGGTACTATT +
Preference number: 5 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSPGFLS*PLMGTI
Trigger: AATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGG...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGT +
Preference number: 5 (lower is better)
Translates to: YLYHVKLNNTVRRRGPAAQLKCT*EGIRPG
Trigger: ACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTG...GGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTCCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTCCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: EQHCAQEGPSGRFPSWFLPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...AAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCCCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: QHCAQEGPSGRFPSWFLSPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...AGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCTCCACTTTATACCTaGGCACACAACACAGGAATT +
Preference number: 5 (lower is better)
Translates to: ETEQHCAQEGPSGRFPSWSPLYT*AHNTGI
Trigger: AATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGA...CCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGACTCCAGGATATTCCTaGGGCCTGATTACAATCCAC +
Preference number: 5 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLTPGYS*GLITIH
Trigger: GTGGATTGTAATCAGGCCCAAGGAATATCCTGGAGT...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTCATTTTAACTGCATGTaGTGCTTTTTACCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPAHFNCM*CFLPGA
Trigger: AGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAGGGTGTCTCCAGGGTaGGGGAGGGTCCTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHRVSPG*GRVLLA
Trigger: GGCCAGAAGGACCCTCCCCAACCCTGGAGACACCCT...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCTGAGAGCTGGTGTCTCTCCAGCAGAGGCCTTCCAACTGTCACTGGAACAAGAGCCCCACTGTGTAAGTaGTATCTTCCCAGTCGCTAC +
Preference number: 5 (lower is better)
Translates to: PESWCLSSRGLPTVTGTRAPLCK*YLPSRY
Trigger: GTAGCGACTGGGAAGATACAACTTACACAGTGGGGC...TCTTGTTCCAGTGACAGTTGGAAGGCCTCTGCTGGAGAGACACCAGCTCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTAGGGTGAGGACATGCTaGTCAAGCTTCTGTATTAGT +
Preference number: 5 (lower is better)
Translates to: CETEQHCAQEGPSGRFPSRVRTC*SSFCIS
Trigger: ACTAATACAGAAGCTTGACAAGCATGTCCTCACCCT...AGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AGAGCTAGAGCTGTGGGGTGCATCTCCTGCTTCACCAAAACTGCAGGTGAGAACCTCCCCCATTTACTGTaGGCCCCTATTTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: RARAVGCISCFTKTAGENLPHLL*APISCL
Trigger: GAGGCAGGAAATAGGGGCCAACAGTAAATGGGGGAG...GTTCTCACCTGCAGTTTTGGTGAAGCAGGAGATGCACCCCACAGCTCTAGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTGGCAGTAACATAAACTaGAACTCTGCAAAGGACACA +
Preference number: 5 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPGSNIN*NSAKDT
Trigger: TGTGTCCTTTGCAGAGTTCAAGTTTATGTTACTGCC...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAAGGCACAGAGAGACTaGGACACAGACGGTCACAGA +
Preference number: 5 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRKAQRD*DTDGHR
Trigger: TCTGTGACCGTCTGTGTCCAAGTCTCTCTGTGCCTT...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGCCTGTGCTCCAACTCTaGCGCTGTCCCGTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQPVLQL*RCPVEE
Trigger: TTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGG...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTCTGGTGCAGGTGAATTaGCACTCTGTGAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGLVQVN*HSVKAF
Trigger: AAATGCTTTCACAGAGTGCAAATTCACCTGCACCAG...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CAA 90 bp AGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCCTGGTGCAGGTGAATTaGCACTCTGTGAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: RRGPAAASLLGFFLQLKCLVQVN*HSVKAF
Trigger: AAATGCTTTCACAGAGTGCAAATTCACCTGCACCAG...GCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CAA 90 bp AATAGGCCCCACTGTGTAAGTTGTATCTTCCCAGTCGCTACTCTTTCAACGCCAAACTCCAGCTCCGAGTaGAAGATGCCCGGAGGCGGG +
Preference number: 5 (lower is better)
Translates to: NRPHCVSCIFPVATLSTPNSSSE*KMPGGG
Trigger: CCCGCCTCCGGGCATCTTCAACTCGGAGCTGGAGTT...TGGCGTTGAAAGAGTAGCGACTGGGAAGATACAACTTACACAGTGGGGCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CAA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAGACGATGATGATGATTaGGGCGAACTCCAGCTCCGA +
Preference number: 5 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGDDDDD*GELQLR
Trigger: TCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTC...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CAA 90 bp CCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGACGATGATGATGATTaGGGCGAACTCCAGCTCCGA +
Preference number: 5 (lower is better)
Translates to: PAAASLLGFFLQLKCTLEDDDDD*GELQLR
Trigger: TCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTC...TTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CAA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTGGTGCTTCAGATTTaGTCCATTCCATACAACCTG +
Preference number: 5 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLLVLQI*SIPYNL
Trigger: CAGGTTGTATGGAATGGACAAAATCTGAAGCACCAG...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679091.1
CDS TCA 90 bp CAGCTGTACACCCAGGGCACTACTGTTTACAGCAACGTCTATCAGTaGGCAGTCTGCACTTCTCAGGTTTGGCCTCACACCTGGACGTGT +
Preference number: 5 (lower is better)
Translates to: QLYTQGTTVYSNVYQ*AVCTSQVWPHTWTC
Trigger: ACACGTCCAGGTGTGAGGCCAAACCTGAGAAGTGCAGACTGCTCACTGATAGACGTTGCTGTAAACAGTAGTGCCCTGGGTGTACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS TCA 90 bp GTGGTCACGTGGCAGGAATGGTGTGGGACAGAGAAGCACGTTCAGTaGCTCCACAGGAAAGCAGCCAGCAAAATCCAGAGTACGGAAACT +
Preference number: 5 (lower is better)
Translates to: VVTWQEWCGTEKHVQ*LHRKAASKIQSTET
Trigger: AGTTTCCGTACTCTGGATTTTGCTGGCTGCTTTCCTGTGGAGTCACTGAACGTGCTTCTCTGTCCCACACCATTCCTGCCACGTGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS TCA 90 bp TATTTTTCCCACCACATGCAGTGCAAGGAGTCACTCCAGGCTCATTaGCAAGAGGAGGGCCTAGTAGGCTCCTGCGGAAATCCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: YFSHHMQCKESLQAH*QEEGLVGSCGNPEG
Trigger: GCCTTCAGGATTTCCGCAGGAGCCTACTAGGCCCTCCTCTTGTCAATGAGCCTGGAGTGACTCCTTGCACTGCATGTGGTGGGAAAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS TCA 90 bp CTCTCCAGGCATCCCAACAGCCTGACCTGCTCCCTCCACAAAATCTaGAAAGCTGCAAACTTCTGGGACTCACGGAACCAGAGAATAGGG +
Preference number: 5 (lower is better)
Translates to: LSRHPNSLTCSLHKI*KAANFWDSRNQRIG
Trigger: CCCTATTCTCTGGTTCCGTGAGTCCCAGAAGTTTGCAGCTTTTCAGATTTTGTGGAGGGAGCAGGTCAGGCTGTTGGGATGCCTGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS TCA 90 bp ATCACGTCAGCAGCACTCCCCCACACGCTCCAGCAGGATGCCGTGTaGAATTCCTTAGCAAACTTCCGTAGTCCTGAAAGAGGACAGAGA +
Preference number: 5 (lower is better)
Translates to: ITSAALPHTLQQDAV*NSLANFRSPERGQR
Trigger: TCTCTGTCCTCTTTCAGGACTACGGAAGTTTGCTAAGGAATTTCACACGGCATCCTGCTGGAGCGTGTGGGGGAGTGCTGCTGACGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 90 bp CTGGGTTCACCTCATTGCTGTCACACAGGGATGGCAAGGGGCTTTTaGTCCTTCCCTCTCACGCTCTGTCATTTCCTCCAGGAGATCTTT +
Preference number: 5 (lower is better)
Translates to: LGSPHCCHTGMARGF*SFPLTLCHFLQEIF
Trigger: AAAGATCTCCTGGAGGAAATGACAGAGCGTGAGAGGGAAGGAGCAAAAGCCCCTTGCCATCCCTGTGTGACAGCAATGAGGTGAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677744.1
ENST00000678223.1
CDS GCA 90 bp CAAGGAAGCACCACAAATCCTCCTGGATTCTCCAGGTGCCTCCTCTaGTGCCAACAGCAACCAGAAAGGAAAAGGCTGGGTTATGCTCCA +
Preference number: 5 (lower is better)
Translates to: QGSTTNPPGFSRCLL*CQQQPERKRLGYAP
Trigger: TGGAGCATAACCCAGCCTTTTCCTTTCTGGTTGCTGTTGGCAGCAGAGGAGGCACCTGGAGAATCCAGGAGGATTTGTGGTGCTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 90 bp ACCCCAGGTGCTAGACTCAAATGCTGTGGCTCCGACCGCAGACTGTaGCTACCAATTATCAACTGCCATCAACAGAAACCAGGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: TPGARLKCCGSDRRL*LPIINCHQQKPGAL
Trigger: CAGAGCTCCTGGTTTCTGTTGATGGCAGTTGATAATTGGTAGCCACAGTCTGCGGTCGGAGCCACAGCATTTGAGTCTAGCACCTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS CCA 90 bp AATGCACACAGAAGGCCTGCGGCTGTAAGAACCCTGGCCATGAGGTaGAGCACAGAGAAGTTCTCGGCCTTGGTAGCCACAGAAAGAAAT +
Preference number: 5 (lower is better)
Translates to: NAHRRPAAVRTLAMR*STEKFSALVATERN
Trigger: ATTTCTTTCTGTGGCTACCAAGGCCGAGAACTTCTCTGTGCTCCACCTCATGGCCAGGGTTCTTACAGCCGCAGGCCTTCTGTGTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 90 bp CCTCTGAAAGTGGTGTTCCCACCACGGGACTTTCTTCCTGCGGGCTaGCATTCTCTAATCCAAACTATGAACAAGGGCATTCGGCATCCC +
Preference number: 5 (lower is better)
Translates to: PLKVVFPPRDFLPAG*HSLIQTMNKGIRHP
Trigger: GGGATGCCGAATGCCCTTGTTCATAGTTTGGATTAGAGAATGCCAGCCCGCAGGAAGAAAGTCCCGTGGTGGGAACACCACTTTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS-3UTR CAA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGGACGATGATGATGATTaGGGCGAACTCCAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKDDDDD*GELQLR
Trigger: GCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTC...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678556.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACCTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHLWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGLTDSR*SSICCS
Trigger: TGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GAACAAGGGACAAAAGTCAGCGGTATGCCCAGGAGTGTTCATTCCCACCAAATGTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: EQGTKVSGMPRSVHSHQMSNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...CATTTGGTGGGAATGAACACTCCTGGGCATACCGCTGACTTTTGTCCCTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGCCAGGCTTCCTATCTTaGCCTTTGATGGGTACTATT +
Preference number: 5 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLPGFLS*PLMGTI
Trigger: AATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGG...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGTCTCCACTTTATACCTaGGCACACAACACAGGAATT +
Preference number: 5 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVSPLYT*AHNTGI
Trigger: AATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGA...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTTCTCCACTTTATACCTaGGCACACAACACAGGAATT +
Preference number: 5 (lower is better)
Translates to: TEQHCAQEGPSGRFPSWFSPLYT*AHNTGI
Trigger: AATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGA...AAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGTQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCATTCCAGCTCATCTaGTTATGTGAAGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAASFQLI*LCEEAT
Trigger: TGTGGCCTCTTCACATAACAAGATGAGCTGGAATGA...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAGTTCTCTAGGGTGGTaGAATGGGAGGAGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRSSLGW*NGRSLF
Trigger: AAAGAGGCTCCTCCCATTCAACCACCCTAGAGAACT...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCTCTCTTGGGATTTCTaGTGGCTTGGGTGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGLSWDF*WLGCVS
Trigger: GGACACACACCCAAGCCACAAGAAATCCCAAGAGAG...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGATTCGCTTCTGCTCTCTaGGGATTTCTTGTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGFASAL*GFLVAW
Trigger: CCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAA...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGCTGGTCATAAACTGTaGCTTGTTTGTTCACACTTC +
Preference number: 5 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLAGHKL*LVCSHF
Trigger: GAAGTGTGAACAAACAAGCAACAGTTTATGACCAGC...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp CATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTTCTACTGTTACTTCATaGGCTCCACAGCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: HVKLNNTVRRRGPAAASLSTVTS*APQLQF
Trigger: AAACTGAAGCTGTGGAGCCAATGAAGTAACAGTAGA...AAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTATGGCAAAACCGAGTTaGCTTTTTGGGTCCGTATTA +
Preference number: 5 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLMAKPS*LFGSVL
Trigger: TAATACGGACCCAAAAAGCAAACTCGGTTTTGCCAT...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCTCCTTCAGTGTGCTGTaGTTCAGGTGGTCACTGGAC +
Preference number: 5 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGSFSVL*FRWSLD
Trigger: GTCCAGTGACCACCTGAACAACAGCACACTGAAGGA...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR CAA 90 bp CTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCCGAGGTCTAAACAGTTaGTTTCATCTGAGTGTAAAA +
Preference number: 5 (lower is better)
Translates to: LCAGGAQRPLPFLVSFSSRGLNS*FHLSVK
Trigger: TTTTACACTCAGATGAAACAAACTGTTTAGACCTCG...GCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587757.5
CDS-3UTR CAA 90 bp CTCGAATGCAGACTCCACGAGCCCGTCCAGCTGGAGTGGCATCTCCTCACTTTAAGAAATACCCAGTTTTaGGCGTCACCTGCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LECRLHEPVQLEWHLLTLRNTQF*ASPAGF
Trigger: AAAGCCAGCAGGTGACGCCAAAAACTGGGTATTTCT...TAAAGTGAGGAGATGCCACTCCAGCTGGACGGGCTCGTGGAGTCTGCATTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CAA 90 bp CACCACGACGATGATGATGATTTGGGCGAACTCCAGCTCCGTAACAGCGATGGAGACGATGATGATGATTaGGGCGAACTCCAGCTCCGT +
Preference number: 5 (lower is better)
Translates to: HHDDDDDLGELQLRNSDGDDDDD*GELQLR
Trigger: ACGGAGCTGGAGTTCGCCCAAATCATCATCATCGTC...TCCATCGCTGTTACGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR CAA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGAAACGCCTGGTGGAATaGTGGAGAGAAGTTCATACA +
Preference number: 5 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLKRLVE*WREVHT
Trigger: TGTATGAACTTCTCTCCACAATTCCACCAGGCGTTT...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS TCA 90 bp GTCCACAGAAGAGTGCTAGAAAGCAGGGCACGCAAGGAAAGAAGTTaGGGCCAAAGTCAAACGTTCACATCCCCCTTCTACGGCGCTGTA +
Preference number: 5 (lower is better)
Translates to: VHRRVLESRARKERS*GQSQTFTSPFYGAV
Trigger: TACAGCGCCGTAGAAGGGGGATGTGAACGTTTGACTTTGGCCTCAACTTCTTTCCTTGCGTGCCCTGCTTTCTAGCACTCTTCTGTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592812.1
ENST00000678556.1
CDS GCA 90 bp GGAGGAAATCTGCAAGTCTCACACAATACTCCTTCCCTTGATCTCTaGTGGAAGCTTTCAGTGTGGAAGGACCGGAGAGGGCGCTTACCA +
Preference number: 5 (lower is better)
Translates to: GGNLQVSHNTPSLDL*WKLSVWKDRRGRLP
Trigger: TGGTAAGCGCCCTCTCCGGTCCTTCCACACTGAAAGCTTCCAGCAGAGATCAAGGGAAGGAGTATTGTGTGAGACTTGCAGATTTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS GCA 90 bp CGAGGGAAGGCAGGAGCTCCGACACTCTCCACTCACATCCCTGGATaGCCAATACTTAGCGAAGTCCTAGTAAACAACAGGTATTCAGCA +
Preference number: 5 (lower is better)
Translates to: RGKAGAPTLSTHIPG*PILSEVLVNNRYSA
Trigger: TGCTGAATACCTGTTGTTTACTAGGACTTCGCTAAGTATTGGGCATCCAGGGATGTGAGTGGAGAGTGTCGGAGCTCCTGCCTTCCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp TCTCAGTCTGAGGTTGCATTGTCTTATGCGGAGGTCAGGGAATGGTaGAGGGAGCCTGAATTAACGATTTCTTTGCCCACACCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: SQSEVALSYAEVREW*REPELTISLPTPQC
Trigger: GCACTGGGGTGTGGGCAAAGAAATCGTTAATTCAGGCTCCCTGCACCATTCCCTGACCTCCGCATAAGACAATGCAACCTCAGACTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 90 bp GGAAATCTGCAAGTCTCACACAATACTCCTTCCCTTGATCTCTGCTaGAAGCTTTCAGTGTGGAAGGACCGGAGAGGGCGCTTACCAAGG +
Preference number: 5 (lower is better)
Translates to: GNLQVSHNTPSLDLC*KLSVWKDRRGRLPR
Trigger: CCTTGGTAAGCGCCCTCTCCGGTCCTTCCACACTGAAAGCTTCCAGCAGAGATCAAGGGAAGGAGTATTGTGTGAGACTTGCAGATTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS CCA 90 bp GGAGCCCAGTCTGTCTACGAGGAGCCAGAGGCCCAGAGGATTAAGTaGCTTCCTGGAATGTTACATGAATCAGACAAAAGAGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: GAQSVYEEPEAQRIK*LPGMLHESDKRARI
Trigger: GATCCTGGCTCTTTTGTCTGATTCATGTAACATTCCAGGAAGCCACTTAATCCTCTGGGCCTCTGGCTCCTCGTAGACAGACTGGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CCA 90 bp CTTGAACCGCTGCCCACCATCCTGTTAGGAGAGTGTCCTCCCAGCTaGTGCTTCAGATTTTGTCCATTCCATACAACCTGTCACTGGCAT +
Preference number: 5 (lower is better)
Translates to: LEPLPTILLGECPPS*CFRFCPFHTTCHWH
Trigger: ATGCCAGTGACAGGTTGTATGGAATGGACAAAATCTGAAGCACCAGCTGGGAGGACACTCTCCTAACAGGATGGTGGGCAGCGGTTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679091.1
ENST00000679303.1
CDS-3UTR CAA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCCTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: HPKVSKSFSDALLFDANSLWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCCTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSLTDSR*SSICCS
Trigger: TGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGTTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTC +
Preference number: 5 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLFLSLP*MGTIVL
Trigger: GAGCACAATAGTACCCATCAAAGGCAAAGATAGGAA...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCCAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGT +
Preference number: 5 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSQLKCT*EGIRPG
Trigger: ACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTG...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTTCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPASFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTAGACCAGATGGAAGTTaGTATCATTTCAGTCTAGTT +
Preference number: 5 (lower is better)
Translates to: CAQEGPSGRFPSWFLSPARPDGS*YHFSLV
Trigger: AACTAGACTGAAATGATACAAACTTCCATCTGGTCT...AGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGACCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: PSGRFPSWFLSPAEVHVGPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...TCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCTGAGAGCTGGTGTCTCTCCAGCAGAGGCCTTCCAACTGTCACTGGAACAAGAACTCCAGGATATTCCTaGGGCCTGATTACAATCCAC +
Preference number: 5 (lower is better)
Translates to: PESWCLSSRGLPTVTGTRTPGYS*GLITIH
Trigger: GTGGATTGTAATCAGGCCCAAGGAATATCCTGGAGT...TCTTGTTCCAGTGACAGTTGGAAGGCCTCTGCTGGAGAGACACCAGCTCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGGACAACTCTTGGGGTTaGGAACAGTCTCTCCAGTTA +
Preference number: 5 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRDNSWG*EQSLQL
Trigger: TAACTGGAGAGACTGTTCCAAACCCCAAGAGTTGTC...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTAGTATTAACAACTTTTaGTTCTACCCATTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: PCETEQHCAQEGPSGRFPSINNF*FYPLGR
Trigger: CCTACCCAATGGGTAGAACAAAAAGTTGTTAATACT...AGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp TGCAAGTCCCTGCCAGCAGGGCCCGATGGGAACACGGGCTCCTCATCTTTGCCTAGTATTAACAACTTTTaGTTCTACCCATTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: CKSLPAGPDGNTGSSSLPSINNF*FYPLGR
Trigger: CCTACCCAATGGGTAGAACAAAAAGTTGTTAATACT...AGGCAAAGATGAGGAGCCCGTGTTCCCATCGGGCCCTGCTGGCAGGGACTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGATGGCAAAACCGAGTTaGCTTTTTGGGTCCGTATTA +
Preference number: 5 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLMAKPS*LFGSVL
Trigger: TAATACGGACCCAAAAAGCAAACTCGGTTTTGCCAT...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GTGGGCACACCTGACCAAGAATCCACTGCAAGTCCCTGCCAGCAGGGCCCGATGATTTTGTGCTATGGTTaGACCACAGCATTAAGAACA +
Preference number: 5 (lower is better)
Translates to: VGTPDQESTASPCQQGPMILCYG*TTALRT
Trigger: TGTTCTTAATGCTGTGGTCAAACCATAGCACAAAAT...CATCGGGCCCTGCTGGCAGGGACTTGCAGTGGATTCTTGGTCAGGTGTGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGTCCTTCAGTGTGCTGTaGTTCAGGTGGTCACTGGAC +
Preference number: 5 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPASFSVL*FRWSLD
Trigger: GTCCAGTGACCACCTGAACAACAGCACACTGAAGGA...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587757.5
ENST00000676773.1
ENST00000677910.1
ENST00000678556.1
CDS-3UTR CAA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCCCAGCTCCGCACTGGTaGAGTTTCCTTGTTCAACAG +
Preference number: 5 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSPAPHW*SFLVQQ
Trigger: CTGTTGAACAAGGAAACTCAACCAGTGCGGAGCTGG...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678556.1
CDS TCA 90 bp GTGGAGCACAGAGAAGTTCTCGGCCTTGGTAGCCACAGAAAGAAATaGCGCCGATGCCACAAACACGTCTTTCTGAAGGTGTCAGCATCT +
Preference number: 5 (lower is better)
Translates to: VEHREVLGLGSHRKK*RRCHKHVFLKVSAS
Trigger: AGATGCTGACACCTTCAGAAAGACGTGTTTGTGGCATCGGCGTCATTTCTTTCTGTGGCTACCAAGGCCGAGAACTTCTCTGTGCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 90 bp CCCAGAATTCCCACGTGTTATGGGAGGGACCCAGGGGAAGGTAGTTaGATCATGGGGGCCAGTCTTTCCCATACTATTCTCATGATAGTG +
Preference number: 5 (lower is better)
Translates to: PRIPTCYGRDPGEGS*IMGASLSHTILMIV
Trigger: CACTATCATGAGAATAGTATGGGAAAGACTGGCCCCCATGATTCAACTACCTTCCCCTGGGTCCCTCCCATAACACGTGGGAATTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 90 bp ATTTCTGCAAAACGAATGACGTTTATGGGAATGCCCACGTTTTCCTaGAGATCCCGACTGGTAGTTCTCCAGGTGTCCAGGATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ISAKRMTFMGMPTFS*RSRLVVLQVSRMAR
Trigger: CCTGGCCATCCTGGACACCTGGAGAACTACCAGTCGGGATCTGCAGGAAAACGTGGGCATTCCCATAAACGTCATTCGTTTTGCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS GCA 90 bp GCATCCCAACAGCCTGACCTGCTCCCTCCACAAAATCTGAAAAGCTaGAAACTTCTGGGACTCACGGAACCAGAGAATAGGGTCACTTCT +
Preference number: 5 (lower is better)
Translates to: ASQQPDLLPPQNLKS*KLLGLTEPENRVTS
Trigger: AGAAGTGACCCTATTCTCTGGTTCCGTGAGTCCCAGAAGTTTGCAGCTTTTCAGATTTTGTGGAGGGAGCAGGTCAGGCTGTTGGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 90 bp TTTCCCACCTCTGAAAGTGGTGTTCCCACCACGGGACTTTCTTCCTaGGGGCTGGCATTCTCTAATCCAAACTATGAACAAGGGCATTCG +
Preference number: 5 (lower is better)
Translates to: FPTSESGVPTTGLSS*GLAFSNPNYEQGHS
Trigger: CGAATGCCCTTGTTCATAGTTTGGATTAGAGAATGCCAGCCCGCAGGAAGAAAGTCCCGTGGTGGGAACACCACTTTCAGAGGTGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 90 bp TGCACATCCTGCCATCTCCCTGACAAGCCTGGCCCTCCTCCAGAATaGGCCATGCTGCATGCTTTTAATATTCCATTTACTCCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: CTSCHLPDKPGPPPE*AMLHAFNIPFTPFW
Trigger: CCAGAAAGGAGTAAATGGAATATTAAAAGCATGCAGCATGGCCCATTCTGGAGGAGGGCCAGGCTTGTCAGGGAGATGGCAGGATGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 90 bp AGATCTCAGTCTGAGGTTGCATTGTCTTATGCGGAGGTCAGGGAATaGTGCAGGGAGCCTGAATTAACGATTTCTTTGCCCACACCCCAG +
Preference number: 5 (lower is better)
Translates to: RSQSEVALSYAEVRE*CREPELTISLPTPQ
Trigger: CTGGGGTGTGGGCAAAGAAATCGTTAATTCAGGCTCCCTGCACCATTCCCTGACCTCCGCATAAGACAATGCAACCTCAGACTGAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS-3UTR CAA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCACTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: IFHPKVSKSFSDALLFDALWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHSNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCTCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: YHVKLNNTVRRRGPAAASSFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...GGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: KLNNTVRRRGPAAASLLGSFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...ACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGAGACCAGATGGAAGTTaGTATCATTTCAGTCTAGTT +
Preference number: 5 (lower is better)
Translates to: QEGPSGRFPSWFLSPAEVRPDGS*YHFSLV
Trigger: AACTAGACTGAAATGATACAAACTTCCATCTGGTCT...CACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCCCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGACCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GGTGAAAGAGATCAAACGGAGATACGCAGAAGTTCAAGAAGTCCTCGCCTGGGTGCCCCACTGTGTAAGTaGTATCTTCCCAGTCGCTAC +
Preference number: 5 (lower is better)
Translates to: GERDQTEIRRSSRSPRLGAPLCK*YLPSRY
Trigger: GTAGCGACTGGGAAGATACAACTTACACAGTGGGGC...ACCCAGGCGAGGACTTCTTGAACTTCTGCGTATCTCCGTTTGATCTCTTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp CATTTTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCGGGATTCAAGATGCCTaGGGTCTCCTACACCGGGAA +
Preference number: 5 (lower is better)
Translates to: HFNCMLCFLPGALQSLAPGIQDA*GLLHRE
Trigger: TTCCCGGTGTAGGAGACCCAAGGCATCTTGAATCCC...GGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAAGGGTGAGGACATGCTaGTCAAGCTTCTGTATTAGT +
Preference number: 5 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGRVRTC*SSFCIS
Trigger: ACTAATACAGAAGCTTGACAAGCATGTCCTCACCCT...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCCCTTCTTGTCATAAACTGTTGCTaGTTTGTTCACACTTCTTTC +
Preference number: 5 (lower is better)
Translates to: VKLNNTVRRRGPAAASLLVINCC*FVHTSF
Trigger: GAAAGAAGTGTGAACAAACAAGCAACAGTTTATGAC...AAGAAGGGAAGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GGCCCAGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGAGATGCAACTTTCCATaGCTATATATACGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: GPAAASLLGFFLQLKCTLRCNFP*LYIRWS
Trigger: TGACCAGCGTATATATAGCAATGGAAAGTTGCATCT...CAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GGAGACTTTGTAGTGGTTCAGCAGGCAGACGATGACCACCACCATCACCGTGACCTGGTGCAGGTGAATTaGCACTCTGTGAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: GDFVVVQQADDDHHHHRDLVQVN*HSVKAF
Trigger: AAATGCTTTCACAGAGTGCAAATTCACCTGCACCAG...GTCACGGTGATGGTGGTGGTCATCGTCTGCCTGCTGAACCACTACAAAGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS-3UTR CAA 90 bp CTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAATCAGACCAGGTTCCTCCTTCAGTGTGCTGTaGTTCAGGTGGTCACTGGAC +
Preference number: 5 (lower is better)
Translates to: LGFFLQLKCTLEGIRPGSSFSVL*FRWSLD
Trigger: GTCCAGTGACCACCTGAACAACAGCACACTGAAGGA...GGAACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CAA 90 bp CGGCCTGACCTGCTTCAACAGCATCCAGCACAGACACGTATTCTCCCAAACACTTTCCTTGGAGGTGGGTaGGCTACTCTACTGTATAGT +
Preference number: 5 (lower is better)
Translates to: RPDLLQQHPAQTRILPNTFLGGG*ATLLYS
Trigger: ACTATACAGTAGAGTAGCCAACCCACCTCCAAGGAA...AGTGTTTGGGAGAATACGTGTCTGTGCTGGATGCTGTTGAAGCAGGTCAGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS TCA 90 bp CCTTCCGGCAGAGGCAACTCGGAACCAGAAGAAACTTTACAAAGATaGGATCCCATCAACAGCCCGGGAATAGGGGAGAAATCCAGGATT +
Preference number: 5 (lower is better)
Translates to: PSGRGNSEPEETLQR*DPINSPGIGEKSRI
Trigger: AATCCTGGATTTCTCCCCTATTCCCGGGCTGTTGATGGGATCTCATCTTTGTAAAGTTTCTTCTGGTTCCGAGTTGCCTCTGCCGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677387.1
ENST00000678223.1
CDS TCA 90 bp ATCCGGACTAATACAACCCTGAAGTTGAAGAATCGGGGACAATGGTaGGATGGAGCTTCAGAATCCAGTCCCCTGATGCTGGGTAGACAG +
Preference number: 5 (lower is better)
Translates to: IRTNTTLKLKNRGQW*DGASESSPLMLGRQ
Trigger: CTGTCTACCCAGCATCAGGGGACTGGATTCTGAAGCTCCATCTCACCATTGTCCCCGATTCTTCAACTTCAGGGTTGTATTAGTCCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 90 bp CCTGCCATCTCCCTGACAAGCCTGGCCCTCCTCCAGAATGGGCCATaGTGCATGCTTTTAATATTCCATTTACTCCTTTCTGGAACACAT +
Preference number: 5 (lower is better)
Translates to: PAISLTSLALLQNGP*CMLLIFHLLLSGTH
Trigger: ATGTGTTCCAGAAAGGAGTAAATGGAATATTAAAAGCATGCAGCATGGCCCATTCTGGAGGAGGGCCAGGCTTGTCAGGGAGATGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp CACACAGTAAGGATGAGGAAGGACAGGGTTTCTAGACAGCTGGGCTaGAGGTATGAAGATGGTTCAAGAGAGCTTAGCTTTGCACGTGCT +
Preference number: 5 (lower is better)
Translates to: HTVRMRKDRVSRQLG*RYEDGSRELSFARA
Trigger: AGCACGTGCAAAGCTAAGCTCTCTTGAACCATCTTCATACCTGCAGCCCAGCTGTCTAGAAACCCTGTCCTTCCTCATCCTTACTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CCA 90 bp ATTTCATTATCAGACAGCACCAACGTGCAAAGCTTTGGCCTGACGTaGTGCAGACCCAAACACTGTCACCTGATGGGAAAAGTACCAGGG +
Preference number: 5 (lower is better)
Translates to: ISLSDSTNVQSFGLT*CRPKHCHLMGKVPG
Trigger: CCCTGGTACTTTTCCCATCAGGTGACAGTGTTTGGGTCTGCACCACGTCAGGCCAAAGCTTTGCACGTTGGTGCTGTCTGATAATGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS-3UTR CAA 90 bp TTCCCAGGCTTCCTATCTTTGCCTTTGATGGGTACTATTGTGCTCTCTGCATTGGACGATGATGATGATTaGGGCGAACTCCAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: FPGFLSLPLMGTIVLSALDDDDD*GELQLR
Trigger: GCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTC...CAATGCAGAGAGCACAATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CAA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRLWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: HPKVSKSFSDALLFDANSSNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGSNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCCAGGCTTCCTATCTTaGCCTTTGATGGGTACTATT +
Preference number: 5 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGPGFLS*PLMGTI
Trigger: AATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGG...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCCGCTTCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: LYHVKLNNTVRRRGPAAASFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...AGCGGCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AGCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGTCTCCACTTTATACCTaGGCACACAACACAGGAATT +
Preference number: 5 (lower is better)
Translates to: SGRFPSWFLSPAEVHVGRSPLYT*AHNTGI
Trigger: AATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGA...CCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKTQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGACTCCAGGATATTCCTaGGGCCTGATTACAATCCAC +
Preference number: 5 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKTPGYS*GLITIH
Trigger: GTGGATTGTAATCAGGCCCAAGGAATATCCTGGAGT...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPAAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGTGCTCTTCAGTCACTaGCCCCCTCCACTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGVLFSH*PPPLFS
Trigger: AGAGAACAGTGGAGGGGGCAAGTGACTGAAGAGCAC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGATGTCTGCTAAACGTGTaGGCTGCTGCTCTTATAAAA +
Preference number: 5 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGCLLNV*AAALIK
Trigger: TTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACA...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GAGAGGCTAATCTGGAGAGCCAGTGAACCTTCAGGGTGTCTCCAGGGTTGGGGAACGTATGCTGGAAGATaGTGTTCTTATAGATGGGAT +
Preference number: 5 (lower is better)
Translates to: ERLIWRASEPSGCLQGWGTYAGR*CSYRWD
Trigger: ATCCCATCTATAAGAACACAATCTTCCAGCATACGT...TCCCCAACCCTGGAGACACCCTGAAGGTTCACTGGCTCTCCAGATTAGCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGGATTTCTTGTGGCTaGGGTGTGTGTCCATGTGTT +
Preference number: 5 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSGISCG*GVCPCV
Trigger: AACACATGGACACACACCCAAGCCACAAGAAATCCC...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679177.1
CDS-3UTR CAA 90 bp ACATCTCCAGGAAATCCCAAGCTGCACAGTGGAGAATTACAGGAACAGAAGAAGTCTGGGGAAGTGTGGTaGTCCCACCTTAGGCTCCTA +
Preference number: 5 (lower is better)
Translates to: TSPGNPKLHSGELQEQKKSGEVW*SHLRLL
Trigger: TAGGAGCCTAAGGTGGGACAACCACACTTCCCCAGA...CTTCTTCTGTTCCTGTAATTCTCCACTGTGCAGCTTGGGATTTCCTGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CAA 90 bp GAAGCCCTAAGAACGAAGGGACCCCAACGGCCTGACCTGCTTCAACAGCATCCACACCTTCTTTTATTATaGTACAGCAGTGACAGTGAC +
Preference number: 5 (lower is better)
Translates to: EALRTKGPQRPDLLQQHPHLLLL*YSSDSD
Trigger: GTCACTGTCACTGCTGTACAATAATAAAAGAAGGTG...TGGATGCTGTTGAAGCAGGTCAGGCCGTTGGGGTCCCTTCGTTCTTAGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS TCA 90 bp GTAGCCACAGAAAGAAATGACGCCGATGCCACAAACACGTCTTTCTaGAGGTGTCAGCATCTCCATCAGGGCAGAGAAGCCTTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: VATERNDADATNTSF*RCQHLHQGREAFVL
Trigger: AAGAACAAAGGCTTCTCTGCCCTGATGGAGATGCTGACACCTTCAGAAAGACGTGTTTGTGGCATCGGCGTCATTTCTTTCTGTGGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 90 bp AGCATTGATGCATTTCAGAAACGCACCTGGAAGGGTGCAGAAGTGTaGGATAGCTTGTATGCCGCCACCTCATCTCAGGACCTGTTTCTA +
Preference number: 5 (lower is better)
Translates to: SIDAFQKRTWKGAEV*DSLYAATSSQDLFL
Trigger: TAGAAACAGGTCCTGAGATGAGGTGGCGGCATACAAGCTATCTCACACTTCTGCACCCTTCCAGGTGCGTTTCTGAAATGCATCAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 90 bp GCCCATCAACTTCCAGTGACATTGGTCAGATTTCTGCAAAACGAATaGCGTTTATGGGAATGCCCACGTTTTCCTGCAGATCCCGACTGG +
Preference number: 5 (lower is better)
Translates to: AHQLPVTLVRFLQNE*RLWECPRFPADPDW
Trigger: CCAGTCGGGATCTGCAGGAAAACGTGGGCATTCCCATAAACGTCATTCGTTTTGCAGAAATCTGACCAATGTCACTGGAAGTTGATGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS GCA 90 bp GCCATCTCCCTGACAAGCCTGGCCCTCCTCCAGAATGGGCCATGCTaGATGCTTTTAATATTCCATTTACTCCTTTCTGGAACACATCAT +
Preference number: 5 (lower is better)
Translates to: AISLTSLALLQNGPC*MLLIFHLLLSGTHH
Trigger: ATGATGTGTTCCAGAAAGGAGTAAATGGAATATTAAAAGCATGCAGCATGGCCCATTCTGGAGGAGGGCCAGGCTTGTCAGGGAGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp CTACTTTTCCTCGCACCAATTCATGCAAGCCTCCCGGTGGTGTTCTaGAAATTTCATTATCAGACAGCACCAACGTGCAAAGCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: LLFLAPIHASLPVVF*KFHYQTAPTCKALA
Trigger: GGCCAAAGCTTTGCACGTTGGTGCTGTCTGATAATGAAATTTGCAGAACACCACCGGGAGGCTTGCATGAATTGGTGCGAGGAAAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS CCA 90 bp AAGCGCCTCTACTTTTCCTCGCACCAATTCATGCAAGCCTCCCGGTaGTGTTCTGCAAATTTCATTATCAGACAGCACCAACGTGCAAAG +
Preference number: 5 (lower is better)
Translates to: KRLYFSSHQFMQASR*CSANFIIRQHQRAK
Trigger: CTTTGCACGTTGGTGCTGTCTGATAATGAAATTTGCAGAACACCACCGGGAGGCTTGCATGAATTGGTGCGAGGAAAAGTAGAGGCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS-3UTR CAA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTCTCTGGTTCGGGCGGTaGATGAAGGACCGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: FACNSPKRNQKQRPCLLILWFGR*MKDRVE
Trigger: CTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAG...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATATCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: FHTLGEKANWLVLPHNNISNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCCCAGGCTTCCTATCTTaGCCTTTGATGGGTACTATT +
Preference number: 5 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSPGFLS*PLMGTI
Trigger: AATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGG...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGCCAGGCTTCCTATCTTaGCCTTTGATGGGTACTATT +
Preference number: 5 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPAPGFLS*PLMGTI
Trigger: AATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGG...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACCAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGT +
Preference number: 5 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHQLKCT*EGIRPG
Trigger: ACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTG...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSTQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCACTCCAGGATATTCCTaGGGCCTGATTACAATCCAC +
Preference number: 5 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPTPGYS*GLITIH
Trigger: GTGGATTGTAATCAGGCCCAAGGAATATCCTGGAGT...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGGCTGTCTGCTAAACGTGTaGGCTGCTGCTCTTATAAAA +
Preference number: 5 (lower is better)
Translates to: LFVPCETEQHCAQEGPSGCLLNV*AAALIK
Trigger: TTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACA...GCCGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCGCCCCACTGTGTAAGTaGTATCTTCCCAGTCGCTAC +
Preference number: 5 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTAPLCK*YLPSRY
Trigger: GTAGCGACTGGGAAGATACAACTTACACAGTGGGGC...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCGAGGGTGAGGACATGCTaGTCAAGCTTCTGTATTAGT +
Preference number: 5 (lower is better)
Translates to: TYLYHVKLNNTVRRRGPARVRTC*SSFCIS
Trigger: ACTAATACAGAAGCTTGACAAGCATGTCCTCACCCT...CGCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGGCCTGAGGACATATTaGAAGTGCTCTGCACCAGAG +
Preference number: 5 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGGLRTY*KCSAPE
Trigger: CTCTGGTGCAGAGCACTTCAAATATGTCCTCAGGCC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAAGGCACAGAGAGACTaGGACACAGACGGTCACAGA +
Preference number: 5 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHKAQRD*DTDGHR
Trigger: TCTGTGACCGTCTGTGTCCAAGTCTCTCTGTGCCTT...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp TTCCTTGGAGGTGGGTTGGCTACTCTACTGTATAGTACAACAAGTAGAACGAAACTGCACTTCTCAGGTTaGGCCTCACACCTGGACGTG +
Preference number: 5 (lower is better)
Translates to: FLGGGLATLLYSTTSRTKLHFSG*ASHLDV
Trigger: CACGTCCAGGTGTGAGGCCAAACCTGAGAAGTGCAG...TTTCGTTCTACTTGTTGTACTATACAGTAGAGTAGCCAACCCACCTCCAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CAA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATACCTGGGTTCACCTCATaGCTGTCACACAGGGATGGC +
Preference number: 5 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIPGFTS*LSHRDG
Trigger: GCCATCCCTGTGTGACAGCAATGAGGTGAACCCAGG...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS-3UTR CAA 90 bp GGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCTGGGTAATGGAAAGCTaGGGCTCCTGGGAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: GFTYLYHVKLNNTVRRRGWVMES*GSWEFL
Trigger: CAGAAACTCCCAGGAGCCCAAGCTTTCCATTACCCA...GCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR CAA 90 bp ATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAGGGGCATGCATGATCTaGCCAAATCCCAGCGCATCC +
Preference number: 5 (lower is better)
Translates to: IFHPKVSKSFSDALLFDAGACMI*PNPSAS
Trigger: GGATGCGCTGGGATTTGGCAAGATCATGCATGCCCC...TGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS-3UTR CAA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAGATGGCAAGGGGCTTTaGCTCCTTCCCTCTCACGCT +
Preference number: 5 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIDGKGL*LLPSHA
Trigger: AGCGTGAGAGGGAAGGAGCAAAAGCCCCTTGCCATC...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS TCA 90 bp ACTGTCGCTGGCTGGTTACAAGAAATAGGGGGTTTGCCACATCCCTaGAGTCAGTGTAGATCTCACAGCATTGATGCATTTCAGAAACGC +
Preference number: 5 (lower is better)
Translates to: TVAGWLQEIGGLPHP*SQCRSHSIDAFQKR
Trigger: GCGTTTCTGAAATGCATCAATGCTGTGAGATCTACACTGACTTCAGGGATGTGGCAAACCCCCTATTTCTTGTAACCAGCCAGCGACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 90 bp CCTGAAGGCTTGGGAGATGCTGTCCACCTAACTTGCGATGGGAAATaGAAATGCACAGAGGATATATCCCATATCCATCCTATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: PEGLGDAVHLTCDGK*KCTEDISHIHPMGV
Trigger: CACTCCCATAGGATGGATATGGGATATATCCTCTGTGCATTTTCATTTCCCATCGCAAGTTAGGTGGACAGCATCTCCCAAGCCTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS TCA 90 bp CGGTTCTGTAAAGAAACCACACTTCCCCTACCCTCGCTCAGCAAGTaGCATATTTCCTTAGAGAACAGAGACTTGGAAGACGCTGCGAAT +
Preference number: 5 (lower is better)
Translates to: RFCKETTLPLPSLSK*HISLENRDLEDAAN
Trigger: ATTCGCAGCGTCTTCCAAGTCTCTGTTCTCTAAGGAAATATGTCACTTGCTGAGCGAGGGTAGGGGAAGTGTGGTTTCTTTACAGAACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS TCA 90 bp AATGAAAGTTACCACGCCAGAACTCAACCCAAGGTCTGTGGCTTCTaGGTTCCCCACACAAACGCCATATGGCAAGGGCATATGTTTTCA +
Preference number: 5 (lower is better)
Translates to: NESYHARTQPKVCGF*VPHTNAIWQGHMFS
Trigger: TGAAAACATATGCCCTTGCCATATGGCGTTTGTGTGGGGAACTCAGAAGCCACAGACCTTGGGTTGAGTTCTGGCGTGGTAACTTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 90 bp TGTAAAATGCACTCTTTCCTCAAGCGCACTTCTTACAAGCAGCTTTaGTTTGTAAACAGAGAGGAGGTGTACGCACTGGCACTCCTTCCG +
Preference number: 5 (lower is better)
Translates to: CKMHSFLKRTSYKQL*FVNREEVYALALLP
Trigger: CGGAAGGAGTGCCAGTGCGTACACCTCCTCTCTGTTTACAAAGCAAAGCTGCTTGTAAGAAGTGCGCTTGAGGAAAGAGTGCATTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 90 bp TTTAGAGGTGTGAAAGTTCTTACGACGCCTCGCAATCTAAGTCTGTaGTTGAAAATTGCCCATGACGATGAAGCGCCACGCAGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: FRGVKVLTTPRNLSL*LKIAHDDEAPRSSA
Trigger: TGCAGAACTGCGTGGCGCTTCATCGTCATGGGCAATTTTCAAGCACAGACTTAGATTGCGAGGCGTCGTAAGAACTTTCACACCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 90 bp TGTTCTGCAAATTTCATTATCAGACAGCACCAACGTGCAAAGCTTTaGCCTGACGTGGTGCAGACCCAAACACTGTCACCTGATGGGAAA +
Preference number: 5 (lower is better)
Translates to: CSANFIIRQHQRAKL*PDVVQTQTLSPDGK
Trigger: TTTCCCATCAGGTGACAGTGTTTGGGTCTGCACCACGTCAGGCCAAAGCTTTGCACGTTGGTGCTGTCTGATAATGAAATTTGCAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS CCA 90 bp CAGGCTGAGGTGGTCTCAGACAGAGATGAGGAACTTGTTGGGAACTaGAGCAAAACTGACTCTTGCTATGTTTTAGCAAAGAGACTGGCA +
Preference number: 5 (lower is better)
Translates to: QAEVVSDRDEELVGN*SKTDSCYVLAKRLA
Trigger: TGCCAGTCTCTTTGCTAAAACATAGCAAGAGTCAGTTTTGCTCCAGTTCCCAACAAGTTCCTCATCTCTGTCTGAGACCACCTCAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS-3UTR CAA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRSNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CATCCCAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTC +
Preference number: 5 (lower is better)
Translates to: HPNPCPQINTVCGQTRWKFLSLP*MGTIVL
Trigger: GAGCACAATAGTACCCATCAAAGGCAAAGATAGGAA...CTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GGTGAAAGAGATCAAACGGAGATACGCAGAAGTTCAAGAAGTCCTCGCCTGGGTCCAGGCTTCCTATCTTaGCCTTTGATGGGTACTATT +
Preference number: 5 (lower is better)
Translates to: GERDQTEIRRSSRSPRLGPGFLS*PLMGTI
Trigger: AATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGG...ACCCAGGCGAGGACTTCTTGAACTTCTGCGTATCTCCGTTTGATCTCTTTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCCCAGGCTTCCTATCTTaGCCTTTGATGGGTACTATT +
Preference number: 5 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPPGFLS*PLMGTI
Trigger: AATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGG...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CCTGAGAGCTGGTGTCTCTCCAGCAGAGGCCTTCCAACTGTCACTGGAACAAGAAGACCAGATGGAAGTTaGTATCATTTCAGTCTAGTT +
Preference number: 5 (lower is better)
Translates to: PESWCLSSRGLPTVTGTRRPDGS*YHFSLV
Trigger: AACTAGACTGAAATGATACAAACTTCCATCTGGTCT...TCTTGTTCCAGTGACAGTTGGAAGGCCTCTGCTGGAGAGACACCAGCTCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GCGGCCGCTTCCCTTCTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAAGACCAGATGGAAGTTaGTATCATTTCAGTCTAGTT +
Preference number: 5 (lower is better)
Translates to: AAASLLGFFLQLKCTLEGRPDGS*YHFSLV
Trigger: AACTAGACTGAAATGATACAAACTTCCATCTGGTCT...TCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAGAAGGGAAGCGGCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CATTTTAACTGCATGTTGTGCTTTTTACCCGGTGCTCTTCAGTCACTTGCCCCCACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: HFNCMLCFLPGALQSLAPTQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...GGGGGCAAGTGACTGAAGAGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAACCCCTGTCCCCAAATAAACACTGTTTGCGGTCAGACCAGATGGAAGTTTGTGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: QPLSPNKHCLRSDQMEVCAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...ACAAACTTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGGGGACAGGGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCTCATTCCAGCTCATCTaGTTATGTGAAGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSSFQLI*LCEEAT
Trigger: TGTGGCCTCTTCACATAACAAGATGAGCTGGAATGA...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGAGGGATTTCTTGTGGCTaGGGTGTGTGTCCATGTGTT +
Preference number: 5 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGGISCG*GVCPCV
Trigger: AACACATGGACACACACCCAAGCCACAAGAAATCCC...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679177.1
CDS-3UTR CAA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGAAGCACGCGGCATTCTaGGTCAGTGTGAGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLKHAAF*VSVSRR
Trigger: TCTCCTGCTCACACTGACCAAGAATGCCGCGTGCTT...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp CTGAAGAAATTGCACTGCTGGAGGATGAGGGCAGCACTGCATGATACTGGATCCGCTGGTCATAAACTGTaGCTTGTTTGTTCACACTTC +
Preference number: 5 (lower is better)
Translates to: LKKLHCWRMRAALHDTGSAGHKL*LVCSHF
Trigger: GAAGTGTGAACAAACAAGCAACAGTTTATGACCAGC...GGATCCAGTATCATGCAGTGCTGCCCTCATCCTCCAGCAGTGCAATTTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTCCTGTGCTCCAACTCTaGCGCTGTCCCGTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFPVLQL*RCPVEE
Trigger: TTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGG...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000677055.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCCTGGTGCAGGTGAATTaGCACTCTGTGAAAGCATTT +
Preference number: 5 (lower is better)
Translates to: ISWYLQSIPFSVFPCPHPLVQVN*HSVKAF
Trigger: AAATGCTTTCACAGAGTGCAAATTCACCTGCACCAG...GGGGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CAA 90 bp TTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGCTTCCAAGACGATGATGATGATTaGGGCGAACTCCAGCTCCGA +
Preference number: 5 (lower is better)
Translates to: LPRSATWHSSVIISRGFQDDDDD*GELQLR
Trigger: TCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTC...TTGGAAGCCCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS-3UTR CAA 90 bp GGCAGGAATCCAGAAAACGATCCACGCAGAACATTGCAATGTCACAGAAATGGCGCACTTATCACTGTCTaGGTGGTATCCATTCTCTGG +
Preference number: 5 (lower is better)
Translates to: GRNPENDPRRTLQCHRNGALITV*VVSILW
Trigger: CCAGAGAATGGATACCACCAAGACAGTGATAAGTGC...GCCATTTCTGTGACATTGCAATGTTCTGCGTGGATCGTTTTCTGGATTCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CAA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGGACGATGATGATGATTaGGGCGAACTCCAGCTCCGT +
Preference number: 5 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGDDDDD*GELQLR
Trigger: ACGGAGCTGGAGTTCGCCCAAATCATCATCATCGTC...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678400.1
CDS-3UTR CAA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCCCTAAGAGCAGGCACTaGATAAACGCCTGGTGGAAT +
Preference number: 5 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTPKSRH*INAWWN
Trigger: ATTCCACCAGGCGTTTATCAAGTGCCTGCTCTTAGG...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS GCA 90 bp CAATTGAATGATGGAAGCGCCTCTACTTTTCCTCGCACCAATTCATaGAAGCCTCCCGGTGGTGTTCTGCAAATTTCATTATCAGACAGC +
Preference number: 5 (lower is better)
Translates to: QLNDGSASTFPRTNS*KPPGGVLQISLSDS
Trigger: GCTGTCTGATAATGAAATTTGCAGAACACCACCGGGAGGCTTGCATGAATTGGTGCGAGGAAAAGTAGAGGCGCTTCCATCATTCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS-3UTR CAA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACCTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: IFPILSSIQKSPKASAMHLTDSR*SSICCS
Trigger: TGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCCCAGCTTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTC +
Preference number: 5 (lower is better)
Translates to: YLFVPCETEQHCAQEGPSFLSLP*MGTIVL
Trigger: GAGCACAATAGTACCCATCAAAGGCAAAGATAGGAA...GCTGGGCCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTCCCAGGCTTCCTATCTTTGCCTTTGATGGGTACTATTGTGCTCTCTGCATTGACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: FPGFLSLPLMGTIVLSALTQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...CAATGCAGAGAGCACAATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CAA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TCTTCCCAGTCGCTACTCTTTCAACGCCACACTAGCCATGAGGCGACACGGTATATTTTGTGCTATGGTTaGACCACAGCATTAAGAACA +
Preference number: 5 (lower is better)
Translates to: SSQSLLFQRHTSHEATRYILCYG*TTALRT
Trigger: TGTTCTTAATGCTGTGGTCAAACCATAGCACAAAAT...ATACCGTGTCGCCTCATGGCTAGTGTGGCGTTGAAAGAGTAGCGACTGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATCCTGTGCTCCAACTCTaGCGCTGTCCCGTCGAGGAA +
Preference number: 5 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDPVLQL*RCPVEE
Trigger: TTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGG...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCCCACAGTCGTTCTGTaGGTTACAGACCAGCGAACC +
Preference number: 5 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRPTVVL*VTDQRT
Trigger: GGTTCGCTGGTCTGTAACCAACAGAACGACTGTGGG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS TCA 90 bp TCTCCAGTCCACCTATTCACAGGGCAGATGCAACTTCACATCTGGTaGGTTAGCATCCTTTTTCAAAAACGTTTGGCCAGATTGACAAGG +
Preference number: 5 (lower is better)
Translates to: SPVHLFTGQMQLHIW*VSILFQKRLARLTR
Trigger: CCTTGTCAATCTGGCCAAACGTTTTTGAAAAAGGATGCTAACTCACCAGATGTGAAGTTGCATCTGCCCTGTGAATAGGTGGACTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS TCA 90 bp ACGTCTGCAGTAACGTCCTCATTATGTGGGTTCCGCAGCCCAACATaGTTAATGTTTGAAGAGCAGAGAACGGGGTTAAAATCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: TSAVTSSLCGFRSPT*LMFEEQRTGLKSSF
Trigger: GAAACTGGATTTTAACCCCGTTCTCTGCTCTTCAAACATTAATCATGTTGGGCTGCGGAACCCACATAATGAGGACGTTACTGCAGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 90 bp CTGAAACTTTTACACTATACAGAAACTGATGGGAGTTCTCGGAAATaGCCCAACAGGAGGTTTGATGTCACGAACGTAGAGCTTGAACCG +
Preference number: 5 (lower is better)
Translates to: LKLLHYTETDGSSRK*PNRRFDVTNVELEP
Trigger: CGGTTCAAGCTCTACGTTCGTGACATCAAACCTCCTGTTGGGCCATTTCCGAGAACTCCCATCAGTTTCTGTATAGTGTAAAAGTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000587905.6
ENST00000590371.5
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS CCA 90 bp GTGATTCACTCTGAGGTTAATTTCCAACATCTGAGAGGTTCAGGCTaGAGATACAGAATATCGTCCAGAGACAGAGGCCCAGATCTAAAG +
Preference number: 5 (lower is better)
Translates to: VIHSEVNFQHLRGSG*RYRISSRDRGPDLK
Trigger: CTTTAGATCTGGGCCTCTGTCTCTGGACGATATTCTGTATCTCCAGCCTGAACCTCTCAGATGTTGGAAATTAACCTCAGAGTGAATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 90 bp ACTTACCTTTTACACTATACAGAAACTGATGGGAGTTCTCGGAAATaGCCCAACAGGAGGTTTGATGTCACGAACGTAGAGCTTGAACCG +
Preference number: 5 (lower is better)
Translates to: TYLLHYTETDGSSRK*PNRRFDVTNVELEP
Trigger: CGGTTCAAGCTCTACGTTCGTGACATCAAACCTCCTGTTGGGCCATTTCCGAGAACTCCCATCAGTTTCTGTATAGTGTAAAAGGTAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590115.1
CDS CCA 90 bp CTGTTTCTAGCTAGACTTGCCCGAATCGGTCTTGTCTTGGTGTCTTaGGTCTTGGTGGCATGGATCTTAGAGAATGACAAGTTGCATTTT +
Preference number: 5 (lower is better)
Translates to: LFLARLARIGLVLVS*VLVAWILENDKLHF
Trigger: AAAATGCAACTTGTCATTCTCTAAGATCCATGCCACCAAGACCCAAGACACCAAGACAAGACCGATTCGGGCAAGTCTAGCTAGAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS-3UTR CAA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRLTDSR*SSICCS
Trigger: TGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFLTDSR*SSICCS
Trigger: TGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGTQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: HPKVSKSFSDALLFDANSTQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGCTGACTGTCCAGTTCTaGCCTTCAGTACAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGLTVQF*PSVQKL
Trigger: CAGCTTTTGTACTGAAGGCAAGAACTGGACAGTCAG...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GACAACAGTGAGCCTCAGTTCTTAATGATGAATCCCAAGGGGTGCACCCTACAGACGTATGCTGGAAGATaGTGTTCTTATAGATGGGAT +
Preference number: 5 (lower is better)
Translates to: DNSEPQFLMMNPKGCTLQTYAGR*CSYRWD
Trigger: ATCCCATCTATAAGAACACAATCTTCCAGCATACGT...CTGTAGGGTGCACCCCTTGGGATTCATCATTAAGAACTGAGGCTCACTGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAGGGATTTCTTGTGGCTaGGGTGTGTGTCCATGTGTT +
Preference number: 5 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIGISCG*GVCPCV
Trigger: AACACATGGACACACACCCAAGCCACAAGAAATCCC...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679177.1
CDS-3UTR CAA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTTCGCTTCTGCTCTCTaGGGATTTCTTGTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: IFPILSSIQKSPKASAMHFASAL*GFLVAW
Trigger: CCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAA...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGCCCACAGTCGTTCTGTaGGTTACAGACCAGCGAACC +
Preference number: 5 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRPTVVL*VTDQRT
Trigger: GGTTCGCTGGTCTGTAACCAACAGAACGACTGTGGG...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS TCA 90 bp TGGCATTCTCTAATCCAAACTATGAACAAGGGCATTCGGCATCCCTaGTGCCCTTGCTGCATTTCTGATTTTCTCAATGCCACTCTTAAC +
Preference number: 5 (lower is better)
Translates to: WHSLIQTMNKGIRHP*CPCCISDFLNATLN
Trigger: GTTAAGAGTGGCATTGAGAAAATCAGAAATGCAGCAAGGGCATCAGGGATGCCGAATGCCCTTGTTCATAGTTTGGATTAGAGAATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS-3UTR CAA 90 bp CTTTTAAAACACATCATCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCCTCACGGACTCTCGGTaGAGTTCCATCTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LLKHIITTQRSSLHSSNFLTDSR*SSICCS
Trigger: TGAACAGCAGATGGAACTCAACCGAGAGTCCGTGAG...GAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGATGATGTGTTTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATTCAAATATGGTTCGGTaGGGTGGGGCCCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYSNMVR*GGALTD
Trigger: GTCCGTGAGGGCCCCACCCAACCGAACCATATTTGA...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACAACACAGGATTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTC +
Preference number: 5 (lower is better)
Translates to: APCTHLTSPLYTLAHNTGFLSLP*MGTIVL
Trigger: GAGCACAATAGTACCCATCAAAGGCAAAGATAGGAA...TCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACTTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTC +
Preference number: 5 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHFLSLP*MGTIVL
Trigger: GAGCACAATAGTACCCATCAAAGGCAAAGATAGGAA...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGCAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGT +
Preference number: 5 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEQLKCT*EGIRPG
Trigger: ACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTG...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CTTGGTTTCTTTCTCCAGCTGAAGTGCACGTTGGAAGGAATCAGACCAGGTTCCAGACCAGATGGAAGTTaGTATCATTTCAGTCTAGTT +
Preference number: 5 (lower is better)
Translates to: LGFFLQLKCTLEGIRPGSRPDGS*YHFSLV
Trigger: AACTAGACTGAAATGATACAAACTTCCATCTGGTCT...GGAACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTGGAGAAAGAAACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000676773.1
ENST00000678556.1
CDS-3UTR CAA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCTCTCCACTTTATACCTaGGCACACAACACAGGAATT +
Preference number: 5 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTSPLYT*AHNTGI
Trigger: AATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGA...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATAACTCCAGGATATTCCTaGGGCCTGATTACAATCCAC +
Preference number: 5 (lower is better)
Translates to: FHTLGEKANWLVLPHNNITPGYS*GLITIH
Trigger: GTGGATTGTAATCAGGCCCAAGGAATATCCTGGAGT...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACACTCCAGGATATTCCTaGGGCCTGATTACAATCCAC +
Preference number: 5 (lower is better)
Translates to: IFPILSSIQKSPKASAMHTPGYS*GLITIH
Trigger: GTGGATTGTAATCAGGCCCAAGGAATATCCTGGAGT...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ATCTTCCCTATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACGACAACTCTTGGGGTTaGGAACAGTCTCTCCAGTTA +
Preference number: 5 (lower is better)
Translates to: IFPILSSIQKSPKASAMHDNSWG*EQSLQL
Trigger: TAACTGGAGAGACTGTTCCAAACCCCAAGAGTTGTC...GTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATAGGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CTCGCCAATACTGTGGACATGTGCAACACATTCATATACTCACAGTTACTAAGGAGGATCAGACAACTCTaGGGGTTTGGAACAGTCTCT +
Preference number: 5 (lower is better)
Translates to: LANTVDMCNTFIYSQLLRRIRQL*GFGTVS
Trigger: AGAGACTGTTCCAAACCCCAAGAGTTGTCTGATCCT...CCTTAGTAACTGTGAGTATATGAATGTGTTGCACATGTCCACAGTATTGGCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp GAGTTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATACGGGCTCCTCATCTTaGCCTGACAGAGGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: EFLKKQTYAGRLCSYRWDTGSSS*PDRGRE
Trigger: CTCTCTTCCTCTGTCAGGCAAAGATGAGGAGCCCGT...ATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCAGTTCTCTAGGGTGGTaGAATGGGAGGAGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFSSLGW*NGRSLF
Trigger: AAAGAGGCTCCTCCCATTCAACCACCCTAGAGAACT...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTCCTTGGAGGTGGGTTGGCTACTCTACTGTATAGTACAACAAGTAGAACGAAATACTGCACAGTGAACTaGTCGCATTTCCTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: FLGGGLATLLYSTTSRTKYCTVN*SHFLPV
Trigger: GACAGGAAGGAAATGCGACAAGTTCACTGTGCAGTA...TTTCGTTCTACTTGTTGTACTATACAGTAGAGTAGCCAACCCACCTCCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS TCA 90 bp ATCAGAAGAACCATGTTAAAGAAATCCTTAGGAAACTTACATGGGTaGTCCCTAAATTACCTTCCGAAGAGCCATGCATGCGTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: IRRTMLKKSLGNLHG*SLNYLPKSHACVLW
Trigger: CCAGAGGACGCATGCATGGCTCTTCGGAAGGTAATTTAGGGATCACCCATGTAAGTTTCCTAAGGATTTCTTTAACATGGTTCTTCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587440.1
CDS TCA 90 bp AACGTCCTCATTATGTGGGTTCCGCAGCCCAACATGATTAATGTTTaGAGAGCAGAGAACGGGGTTAAAATCCAGTTTCTAGAATCCTCA +
Preference number: 5 (lower is better)
Translates to: NVLIMWVPQPNMINV*RAENGVKIQFLESS
Trigger: TGAGGATTCTAGAAACTGGATTTTAACCCCGTTCTCTGCTCTTCAAACATTAATCATGTTGGGCTGCGGAACCCACATAATGAGGACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 90 bp TGCCCTTGCTGCATTTCTGATTTTCTCAATGCCACTCTTAACCCTTaGTTTGGTTTGGCTGTGTTGCCACCCAAATCTCAACTTGAATTG +
Preference number: 5 (lower is better)
Translates to: CPCCISDFLNATLNP*FGLAVLPPKSQLEL
Trigger: CAATTCAAGTTGAGATTTGGGTGGCAACACAGCCAAACCAAATCAAGGGTTAAGAGTGGCATTGAGAAAATCAGAAATGCAGCAAGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS-3UTR CAA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGCCAGGCTTCCTATCTTaGCCTTTGATGGGTACTATT +
Preference number: 5 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLPGFLS*PLMGTI
Trigger: AATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGG...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAACCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGTCTCCACTTTATACCTaGGCACACAACACAGGAATT +
Preference number: 5 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGSPLYT*AHNTGI
Trigger: AATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGA...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGTGTCTGCTAAACGTGTaGGCTGCTGCTCTTATAAAA +
Preference number: 5 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGCLLNV*AAALIK
Trigger: TTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACA...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTTCTGAAAAAGCAAACGTATGCTGGAAGATTGTGTTCTTATAGATGGGATTCACCCACAGTCGTTCTGTaGGTTACAGACCAGCGAACC +
Preference number: 5 (lower is better)
Translates to: FLKKQTYAGRLCSYRWDSPTVVL*VTDQRT
Trigger: GGTTCGCTGGTCTGTAACCAACAGAACGACTGTGGG...TGAATCCCATCTATAAGAACACAATCTTCCAGCATACGTTTGCTTTTTCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
CDS CCA 90 bp CTGAATCAGAAGAACCATGTTAAAGAAATCCTTAGGAAACTTACATaGGTGATCCCTAAATTACCTTCCGAAGAGCCATGCATGCGTCCT +
Preference number: 5 (lower is better)
Translates to: LNQKNHVKEILRKLT*VIPKLPSEEPCMRP
Trigger: AGGACGCATGCATGGCTCTTCGGAAGGTAATTTAGGGATCACCCATGTAAGTTTCCTAAGGATTTCTTTAACATGGTTCTTCTGATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587440.1
CDS-3UTR CAA 90 bp TTCCACACCTTAGGAGAAAAAGCGAACTGGCTGGTTCTTCCCCACAATAATATATTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTC +
Preference number: 5 (lower is better)
Translates to: FHTLGEKANWLVLPHNNIFLSLP*MGTIVL
Trigger: GAGCACAATAGTACCCATCAAAGGCAAAGATAGGAA...TATATTATTGTGGGGAAGAACCAGCCAGTTCGCTTTTTCTCCTAAGGTGTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGTTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTC +
Preference number: 5 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLFLSLP*MGTIVL
Trigger: GAGCACAATAGTACCCATCAAAGGCAAAGATAGGAA...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATCAGCTGAAGTGCACGTaGGAAGGAATCAGACCAGGT +
Preference number: 5 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYQLKCT*EGIRPG
Trigger: ACCTGGTCTGATTCCTTCCAACGTGCACTTCAGCTG...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCTCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTSFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACTCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHSFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCCCCTGCCCACACCAGACCAGATGGAAGTTaGTATCATTTCAGTCTAGTT +
Preference number: 5 (lower is better)
Translates to: LFHGIFKASRSLFSPAHTRPDGS*YHFSLV
Trigger: AACTAGACTGAAATGATACAAACTTCCATCTGGTCT...GGTGTGGGCAGGGGAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGCGATGCACTGCTATTaGATGCAAACTCCTGCAACA +
Preference number: 5 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEAMHCY*MQTPAT
Trigger: TGTTGCAGGAGTTTGCATCAAATAGCAGTGCATCGC...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CGCAGGATCCACAACAACAAAAGTGTCAACTTTTTACGGCCCTTTCAAACAGATCATTTTAACTGCATGTaGTGCTTTTTACCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: RRIHNNKSVNFLRPFQTDHFNCM*CFLPGA
Trigger: AGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG...ATCTGTTTGAAAGGGCCGTAAAAAGTTGACACTTTTGTTGTTGTGGATCCTGCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp ACCTTGGCTTTTAAACTAATTCATTACAGAGCCCCAGCCTCGAAGACCTTTCAACATTTTAACTGCATGTaGTGCTTTTTACCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: TLAFKLIHYRAPASKTFQHFNCM*CFLPGA
Trigger: AGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG...TTGAAAGGTCTTCGAGGCTGGGGCTCTGTAATGAATTAGTTTAAAAGCCAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGTCATTCCAGCTCATCTaGTTATGTGAAGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRSFQLI*LCEEAT
Trigger: TGTGGCCTCTTCACATAACAAGATGAGCTGGAATGA...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ATGGCTTATTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGGCAGTAACATAAACTaGAACTCTGCAAAGGACACA +
Preference number: 5 (lower is better)
Translates to: MAYYHDQQHGILPSLFLGGSNIN*NSAKDT
Trigger: TGTGTCCTTTGCAGAGTTCAAGTTTATGTTACTGCC...CCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAATAAGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp CACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGGCACACGTCATAAACTGTTGCTaGTTTGTTCACACTTCTTTC +
Preference number: 5 (lower is better)
Translates to: HKGAPCTHLTSPLYTLAHVINCC*FVHTSF
Trigger: GAAAGAAGTGTGAACAAACAAGCAACAGTTTATGAC...GTGTGCCAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp CATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTGATGCAAACTCCAGATGCAACTTTCCATaGCTATATATACGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: HPKVSKSFSDALLFDANSRCNFP*LYIRWS
Trigger: TGACCAGCGTATATATAGCAATGGAAAGTTGCATCT...GGAGTTTGCATCAAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp AAAAGAGGCAGATACGTGACAGGTGGAAATCTTTTTCTGTATATAACTGGGAATGTGCACTTTTCACTGTaGCCTGACACCTTCGTGATG +
Preference number: 5 (lower is better)
Translates to: KRGRYVTGGNLFLYITGNVHFSL*PDTFVM
Trigger: CATCACGAAGGTGTCAGGCAACAGTGAAAAGTGCAC...ATTCCCAGTTATATACAGAAAAAGATTTCCACCTGTCACGTATCTGCCTCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp ACAGACACGTATTCTCCCAAACACTTCCTGATGACTTCAGTGGTGCTGGAGTTTAGTGGTGCTGGAGTTTaGCTAAAGGTTTTCATATTT +
Preference number: 5 (lower is better)
Translates to: TDTYSPKHFLMTSVVLEFSGAGV*LKVFIF
Trigger: AAATATGAAAACCTTTAGCAAAACTCCAGCACCACT...AAACTCCAGCACCACTGAAGTCATCAGGAAGTGTTTGGGAGAATACGTGTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590308.1
CDS-3UTR CAA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTTCCTATCTTTGCCTTaGATGGGTACTATTGTGCTC +
Preference number: 5 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCFLSLP*MGTIVL
Trigger: GAGCACAATAGTACCCATCAAAGGCAAAGATAGGAA...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTCCAGGCTTCCTATCTTaGCCTTTGATGGGTACTATT +
Preference number: 5 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIPGFLS*PLMGTI
Trigger: AATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGG...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGCCAGGCTTCCTATCTTaGCCTTTGATGGGTACTATT +
Preference number: 5 (lower is better)
Translates to: IWFYLFVPCETEQHCAQEPGFLS*PLMGTI
Trigger: AATAGTACCCATCAAAGGCAAAGATAGGAAGCCTGG...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000587757.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGGGTCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: WFYLFVPCETEQHCAQEGSFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...CCCCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TATCTTATCTTCCATCCAAAAGTCTCCAAAAGCTTCAGCGATGCACTGCTATTTCCAAATAAACACTGTTaGCGGTCAGACCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: YLIFHPKVSKSFSDALLFPNKHC*RSDQME
Trigger: TTCCATCTGGTCTGACCGCAAACAGTGTTTATTTGG...AAATAGCAGTGCATCGCTGAAGCTTTTGGAGACTTTTGGATGGAAGATAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCTCCACTTTATACCTaGGCACACAACACAGGAATT +
Preference number: 5 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCSPLYT*AHNTGI
Trigger: AATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGA...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATAGTTCTCTAGGGTGGTaGAATGGGAGGAGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYSSLGW*NGRSLF
Trigger: AAAGAGGCTCCTCCCATTCAACCACCCTAGAGAACT...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTTAAAAATTCGCTTCTGCTCTCTTGGGATTTCTTGTGGCTTGGGTGTGTGTCCTCTGCTGAAGGGAAATaGACCATCAATTCATGTTAT +
Preference number: 5 (lower is better)
Translates to: FKNSLLLSWDFLWLGCVSSAEGK*TINSCY
Trigger: ATAACATGAATTGATGGTCAATTTCCCTTCAGCAGA...GGACACACACCCAAGCCACAAGAAATCCCAAGAGAGCAGAAGCGAATTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp TTACCACGATCAGCAACATGGCATTCTTCCGTCATTATTTCTAGGGGCTTCCAATCTGCTGAAGGGAAATaGACCATCAATTCATGTTAT +
Preference number: 5 (lower is better)
Translates to: LPRSATWHSSVIISRGFQSAEGK*TINSCY
Trigger: ATAACATGAATTGATGGTCAATTTCCCTTCAGCAGA...TTGGAAGCCCCTAGAAATAATGACGGAAGAATGCCATGTTGCTGATCGTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCTCTACTGTTACTTCATaGGCTCCACAGCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFSTVTS*APQLQF
Trigger: AAACTGAAGCTGTGGAGCCAATGAAGTAACAGTAGA...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS TCA 90 bp CACCAGATGGCTTTCAGGGGTGGATTTAGATTTAATTGGCCGGACTaGATCAGAAGAACCATGTTAAAGAAATCCTTAGGAAACTTACAT +
Preference number: 5 (lower is better)
Translates to: HQMAFRGGFRFNWPD*IRRTMLKKSLGNLH
Trigger: ATGTAAGTTTCCTAAGGATTTCTTTAACATGGTTCTTCTGATTCAGTCCGGCCAATTAAATCTAAATCCACCCCTGAAAGCCATCTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587440.1
CDS GCA 90 bp AAAAACCCATTTTCTGAGGAGAAATTCAAGCTGGCTGCAGAAATGTaGATAAATAGCAAGAAGCCTAATGTTAATCTCCAAGACCATGGG +
Preference number: 5 (lower is better)
Translates to: KNPFSEEKFKLAAEM*INSKKPNVNLQDHG
Trigger: CCCATGGTCTTGGAGATTAACATTAGGCTTCTTGCTATTTATGCACATTTCTGCAGCCAGCTTGAATTTCTCCTCAGAAAATGGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 90 bp AGAAATCAGATCAGTTTGAAGGGCTCAGAAGAAGACAGGAAAATGTaGGAAAGTTTGAAACTTCCTAGAGACTTGTTAAATGGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: RNQISLKGSEEDRKM*ESLKLPRDLLNGFA
Trigger: GGCAAAGCCATTTAACAAGTCTCTAGGAAGTTTCAAACTTTCCCACATTTTCCTGTCTTCTTCTGAGCCCTTCAAACTGATCTGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS-3UTR CAA 90 bp TCACAACACAAAGGAGCTCCTTGCACTCATCTAACTTCTCCACTTTATACCTTGAGACCAGATGGAAGTTaGTATCATTTCAGTCTAGTT +
Preference number: 5 (lower is better)
Translates to: SQHKGAPCTHLTSPLYTLRPDGS*YHFSLV
Trigger: AACTAGACTGAAATGATACAAACTTCCATCTGGTCT...CAAGGTATAAAGTGGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGTTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATACACAAAGGAGCTCCTaGCACTCATCTAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYTQRSS*HSSNFS
Trigger: GGAGAAGTTAGATGAGTGCAAGGAGCTCCTTTGTGT...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTCATTTTAACTGCATGTaGTGCTTTTTACCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: FACNSPKRNQKQRPCLLIHFNCM*CFLPGA
Trigger: AGCACCGGGTAAAAAGCACAACATGCAGTTAAAATG...AATGAGCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATAGGATCAGACAACTCTaGGGGTTTGGAACAGTCTCT +
Preference number: 5 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYRIRQL*GFGTVS
Trigger: AGAGACTGTTCCAAACCCCAAGAGTTGTCTGATCCT...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CGCAGGATCCACAACAACAAAAGTGTCAACTTTTTACGGCCCTTTCAAACAGATTCTGCTGAAGGGAAATaGACCATCAATTCATGTTAT +
Preference number: 5 (lower is better)
Translates to: RRIHNNKSVNFLRPFQTDSAEGK*TINSCY
Trigger: ATAACATGAATTGATGGTCAATTTCCCTTCAGCAGA...ATCTGTTTGAAAGGGCCGTAAAAAGTTGACACTTTTGTTGTTGTGGATCCTGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp TTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGGACGTATGCTGGAAGATaGTGTTCTTATAGATGGGAT +
Preference number: 5 (lower is better)
Translates to: FGFTYLYHVKLNNTVRRRTYAGR*CSYRWD
Trigger: ATCCCATCTATAAGAACACAATCTTCCAGCATACGT...CCTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000679091.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TCTAGTTTGCATGCAATTCCCCTAAAAGGAATCAGAAACAAAGACCGTGTTTGCTCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: SSLHAIPLKGIRNKDRVCSFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...GCAAACACGGTCTTTGTTTCTGATTCCTTTTAGGGGAATTGCATGCAAACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp ACCTCTGTGGGTTTTATTTCATGGTATCTTCAAAGCATCCCGTTCTCTGTTTTCAGACCAGATGGAAGTTaGTATCATTTCAGTCTAGTT +
Preference number: 5 (lower is better)
Translates to: TSVGFISWYLQSIPFSVFRPDGS*YHFSLV
Trigger: AACTAGACTGAAATGATACAAACTTCCATCTGGTCT...GAAAACAGAGAACGGGATGCTTTGAAGATACCATGAAATAAAACCCACAGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp AAAAGAGGCAGATACGTGACAGGTGGAAATCTTTTTCTGTATATAACTGGGAATTGTCTGCTAAACGTGTaGGCTGCTGCTCTTATAAAA +
Preference number: 5 (lower is better)
Translates to: KRGRYVTGGNLFLYITGNCLLNV*AAALIK
Trigger: TTTTATAAGAGCAGCAGCCAACACGTTTAGCAGACA...ATTCCCAGTTATATACAGAAAAAGATTTCCACCTGTCACGTATCTGCCTCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359446.10
ENST00000399848.7
CDS-3UTR CAA 90 bp ATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGTCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: IWFYLFVPCETEQHCAQESFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...CTCCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGTCATTTCAGTCTAGTTaGCATGCAATTCCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRSFQSS*HAIPLK
Trigger: TTTTAGGGGAATTGCATGCAAACTAGACTGAAATGA...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp TCATTTGGTTTTACTTATTTGTACCATGTGAAACTGAACAACACTGTGCGCAGGAGACCAGATGGAAGTTaGTATCATTTCAGTCTAGTT +
Preference number: 5 (lower is better)
Translates to: SFGFTYLYHVKLNNTVRRRPDGS*YHFSLV
Trigger: AACTAGACTGAAATGATACAAACTTCCATCTGGTCT...CCTGCGCACAGTGTTGTTCAGTTTCACATGGTACAAATAAGTAAAACCAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS-3UTR CAA 90 bp CAGGTGAAAAGACAACATACAGAACTTCACGTAAAACAGTTCCCTTGTAAATATTCTCCACTTTATACCTaGGCACACAACACAGGAATT +
Preference number: 5 (lower is better)
Translates to: QVKRQHTELHVKQFPCKYSPLYT*AHNTGI
Trigger: AATTCCTGTGTTGTGTGCCAAGGTATAAAGTGGAGA...ATATTTACAAGGGAACTGTTTTACGTGAAGTTCTGTATGTTGTCTTTTCACCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000585931.5
ENST00000676773.1
ENST00000677055.1
ENST00000677744.1
ENST00000677910.1
ENST00000678400.1
ENST00000678556.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS TCA 90 bp CCTGGGTTCTTGATACATAAATTCTATCACACAGATGGCACTATGTaGCATATAGGGATAATTATTAAGTTACTAAAACTGAAGCACCCA +
Preference number: 5 (lower is better)
Translates to: PGFLIHKFYHTDGTM*HIGIIIKLLKLKHP
Trigger: TGGGTGCTTCAGTTTTAGTAACTTAATAATTATCCCTATATGTCACATAGTGCCATCTGTGTGATAGAATTTATGTATCAAGAACCCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp TGCTGGGCCGGCCTCTGGGAGCATCCGCGGCCCACCTaGCCGGCTCTCGCGCGGGCGGGCGGTACCTGGGTG +
Preference number: 6 (lower is better)
Translates to: CWAGLWEHPRPT*PALARAGGTWV
Trigger: CACCCAGGTACCGCCCGCCCGCGCGAGAGCCGGGCAGGTGGGCCGCGGATGCTCCCAGAGGCCGGCCCAGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS GCA 72 bp GGTACCTGGGTGTGGCACCTGGGCGGCGGCGGTCCCTaGTCCCGTCAGCCGTCCAGCCAGGGCGCGGAGGCC +
Preference number: 6 (lower is better)
Translates to: GTWVWHLGGGGP*SRQPSSQGAEA
Trigger: GGCCTCCGCGCCCTGGCTGGACGGCTGACGGGAGCAGGGACCGCCGCCGCCCAGGTGCCACACCCAGGTACC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000590371.5
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS CCA 72 bp CTCTCGCGCGGGCGGGCGGTACCTGGGTGTGGCACCTaGGCGGCGGCGGTCCCTGCTCCCGTCAGCCGTCCA +
Preference number: 6 (lower is better)
Translates to: LSRGRAVPGCGT*AAAVPAPVSRP
Trigger: TGGACGGCTGACGGGAGCAGGGACCGCCGCCGCCCAGGTGCCACACCCAGGTACCGCCCGCCCGCGCGAGAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000590371.5
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS TCA 72 bp CCTCCCGCCGCCGTCGCCGCCGTCTGTCTCCAGCCGTaGCTGCGCGCCGCGGCTGTGTCTGTCTCCAACTCC +
Preference number: 6 (lower is better)
Translates to: PPAAVAAVCLQP*LRAAAVSVSNS
Trigger: GGAGTTGGAGACAGACACAGCCGCGGCGCGCAGTCACGGCTGGAGACAGACGGCGGCGACGGCGGCGGGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590371.5
CDS TCA 72 bp AACCTCCGAGGCGCCCAGCCGCGGTGCGGCGCTGTCTaGAGGCCACAGGCACCCTTCCTGCGGCAGCCCGTC +
Preference number: 6 (lower is better)
Translates to: NLRGAQPRCGAV*RPQAPFLRQPV
Trigger: GACGGGCTGCCGCAGGAAGGGTGCCTGTGGCCTTCAGACAGCGCCGCACCGCGGCTGGGCGCCTCGGAGGTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS GCA 72 bp AGGCCCTCAGAACACGGGCGCCCCTGGCCACGCCGCTaGCAGCATCCTGCAGGGTCGCACCTGCACGCGGGT +
Preference number: 6 (lower is better)
Translates to: RPSEHGRPWPRR*QHPAGSHLHAG
Trigger: ACCCGCGTGCAGGTGCGACCCTGCAGGATGCTGGCAGCGGCGTGGCCAGGGGCGCCCGTGTTCTGAGGGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000590371.5
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS TCA 72 bp GGGGAATTCTCGGAAACGGGCGGGCTGGGCCATCACTaGGCCTCCGACGGCCCCGGCGCCAGCAGCGAGGGA +
Preference number: 6 (lower is better)
Translates to: GEFSETGGLGHH*ASDGPGASSEG
Trigger: TCCCTCGCTGCTGGCGCCGGGGCCGTCGGAGGCTCAGTGATGGCCCAGCCCGCCCGTTTCCGAGAATTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS GCA 72 bp CCGCCGCCGTCGCCGCCGTCTGTCTCCAGCCGTGACTaGGCGCCGCGGCTGTGTCTGTCTCCAACTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PPPSPPSVSSRD*APRLCLSPTPP
Trigger: TGGAGGAGTTGGAGACAGACACAGCCGCGGCGCGCAGTCACGGCTGGAGACAGACGGCGGCGACGGCGGCGG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590371.5
CDS CCA 72 bp CCCTGCAGATCCGCTCCCAGAGCGTGCTCGCCCGGCTaGGAGCACCCACAGCGTCCCTCAGGCTGCGAGCCA +
Preference number: 6 (lower is better)
Translates to: PCRSAPRACSPG*EHPQRPSGCEP
Trigger: TGGCTCGCAGCCTGAGGGACGCTGTGGGTGCTCCCAGCCGGGCGAGCACGCTCTGGGAGCGGATCTGCAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS CCA 72 bp GGCCCGCGTTTGGGGAATTCTCGGAAACGGGCGGGCTaGGCCATCACTGAGCCTCCGACGGCCCCGGCGCCA +
Preference number: 6 (lower is better)
Translates to: GPRLGNSRKRAG*AITEPPTAPAP
Trigger: TGGCGCCGGGGCCGTCGGAGGCTCAGTGATGGCCCAGCCCGCCCGTTTCCGAGAATTCCCCAAACGCGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS GCA 72 bp TCGCCCGGCTGGGAGCACCCACAGCGTCCCTCAGGCTaGGAGCCAGGCTGCGGGCTGTCCTCTTCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: SPGWEHPQRPSG*EPGCGLSSSGA
Trigger: AGCACCAGAAGAGGACAGCCCGCAGCCTGGCTCGCAGCCTGAGGGACGCTGTGGGTGCTCCCAGCCGGGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS GCA 72 bp CGCGTGCTTCTCCCCTGCAGATCCGCTCCCAGAGCGTaGTCGCCCGGCTGGGAGCACCCACAGCGTCCCTCA +
Preference number: 6 (lower is better)
Translates to: RVLLPCRSAPRA*SPGWEHPQRPS
Trigger: TGAGGGACGCTGTGGGTGCTCCCAGCCGGGCGAGCACGCTCTGGGAGCGGATCTGCAGGGGAGAAGCACGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS GCA 72 bp CTGCCAGCATCCTGCAGGGTCGCACCTGCACGCGGGTaGTCCTTGTCCCAGCCGCAGCTCTCTGTGCTCCGC +
Preference number: 6 (lower is better)
Translates to: LPASCRVAPARG*SLSQPQLSVLR
Trigger: GCGGAGCACAGAGAGCTGCGGCTGGGACAAGGAGCACCCGCGTGCAGGTGCGACCCTGCAGGATGCTGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000590371.5
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS CAA 90 bp CGGCCGTCACGGGAGAGCGCGAACTCAGCGTGTAGGGGCCCGCGTTaGGGGAATTCTCGGAAACGGGCGGGCTGGGCCATCACTGAGCCT +
Preference number: 6 (lower is better)
Translates to: RPSRESANSACRGPR*GNSRKRAGWAITEP
Trigger: AGGCTCAGTGATGGCCCAGCCCGCCCGTTTCCGAGAATTCCCCAAACGCGGGCCCCTACACGCTGAGTTCGCGCTCTCCCGTGACGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS GCA 72 bp GCAAGCGTTGGGGTGCGTGTGGGACCGGCAGGGGTCTaGGGACGTGCCAGCGGGAGTGGAAATGGGAAACCG +
Preference number: 6 (lower is better)
Translates to: ASVGVRVGPAGV*GRASGSGNGKP
Trigger: CGGTTTCCCATTTCCACTCCCGCTGGCACGTCCGCAGACCCCTGCCGGTCCCACACGCACCCCAACGCTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 72 bp ACGTATACGGCGGTCCAGCTGCTCGGAGACGAAGGGTaGGCTCAGGGACCGCCTGTGACGGGAGGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: TYTAVQLLGDEG*AQGPPVTGGKG
Trigger: GCCCTTCCCTCCCGTCACAGGCGGTCCCTGAGCCCACCCTTCGTCTCCGAGCAGCTGGACCGCCGTATACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS CCA 72 bp AGTGAGCATGCTCTGTGGGCATCGCACCGTCCCAGGTaGAGCGCCGGGTATCCTCGGGTGACCGCCTCGAGC +
Preference number: 6 (lower is better)
Translates to: SEHALWASHRPR*SAGYPRVTASS
Trigger: GCTCGAGGCGGTCACCCGAGGATACCCGGCGCTCCACCTGGGACGGTGCGATGCCCACAGAGCATGCTCACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679091.1
ENST00000679303.1
CDS CAA 72 bp GCATACTGCTCCCCGGACAAGCCTGTGCTCCAACTCTaGCGCTGTCCCGTCGAGGAAGCCGCCGGGCGAGGC +
Preference number: 6 (lower is better)
Translates to: AYCSPDKPVLQL*RCPVEEAAGRG
Trigger: GCCTCGCCCGGCGGCTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGGAGCAGTATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS CAA 72 bp CGGGAGAGCGCGAACTCAGCGTGTAGGGGCCCGCGTTaGGGGAATTCTCGGAAACGGGCGGGCTGGGCCATC +
Preference number: 6 (lower is better)
Translates to: RESANSACRGPR*GNSRKRAGWAI
Trigger: GATGGCCCAGCCCGCCCGTTTCCGAGAATTCCCCAAACGCGGGCCCCTACACGCTGAGTTCGCGCTCTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS CAA 90 bp CAGCTTCCGGCATACTGCTCCCCGGACAAGCCTGTGCTCCAACTCTaGCGCTGTCCCGTCGAGGAAGCCGCCGGGCGAGGCTCAGGTCAC +
Preference number: 6 (lower is better)
Translates to: QLPAYCSPDKPVLQL*RCPVEEAAGRGSGH
Trigger: GTGACCTGAGCCTCGCCCGGCGGCTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS CAA 90 bp CTGCCTCAGGAGGTCGCCTGCAGGTGCGCACGGAAGCGGCCGAGGTaGGGAAGACCCGTCCCCTCGTTCTTCCTTGGAGAGGCACCACAG +
Preference number: 6 (lower is better)
Translates to: LPQEVACRCARKRPR*GRPVPSFFLGEAPQ
Trigger: CTGTGGTGCCTCTCCAAGGAAGAACGAGGGGACGGGTCTTCCCAACCTCGGCCGCTTCCGTGCGCACCTGCAGGCGACCTCCTGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS TCA 72 bp GAGAGAGGAAATGGCACACGCGCAAGCACGGAGGCATaGGGGGCCAGGGTCCTGGAGGACACTGGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: ERGNGTRASTEA*GARVLEDTGPG
Trigger: TCCCGGCCCAGTGTCCTCCAGGACCCTGGCCCCTCATGCCTCCGTGCTTGCGCGTGTGCCATTTCCTCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586207.5
CDS GCA 72 bp CATACTGCTCCCCGGACAAGCCTGTGCTCCAACTCTTaGGCTGTCCCGTCGAGGAAGCCGCCGGGCGAGGCT +
Preference number: 6 (lower is better)
Translates to: HTAPRTSLCSNS*AVPSRKPPGEA
Trigger: AGCCTCGCCCGGCGGCTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGGAGCAGTATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS GCA 72 bp ACACGCGACAGGCGGGACGCTCACGTTAGGCTCGCGTaGTTCTCCCCTGCAGATCCGCTCCCAGAGCGTGCT +
Preference number: 6 (lower is better)
Translates to: TRDRRDAHVRLA*FSPADPLPERA
Trigger: AGCACGCTCTGGGAGCGGATCTGCAGGGGAGAAGCACGCGAGCCTAACGTGAGCGTCCCGCCTGTCGCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS GCA 72 bp CACGCGGGTGCTCCTTGTCCCAGCCGCAGCTCTCTGTaGTCCGCCTCTGAAATCGCACTGCCGAGCCACAGG +
Preference number: 6 (lower is better)
Translates to: HAGAPCPSRSSL*SASEIALPSHR
Trigger: CCTGTGGCTCGGCAGTGCGATTTCAGAGGCGGAGCACAGAGAGCTGCGGCTGGGACAAGGAGCACCCGCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 72 bp ATGTGGTGCAAGCTGCCTCAGGAGGTCGCCTGCAGGTaGGCACGGAAGCGGCCGAGGTTGGGAAGACCCGTC +
Preference number: 6 (lower is better)
Translates to: MWCKLPQEVACR*ARKRPRLGRPV
Trigger: GACGGGTCTTCCCAACCTCGGCCGCTTCCGTGCGCACCTGCAGGCGACCTCCTGAGGCAGCTTGCACCACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CCA 72 bp ATGATCTGCGGCAGCCCGTCCTCCCGCCTCCGGCTCTaGTTCGGGCGGTTGATGAAGGACCGCGTGGAGACT +
Preference number: 6 (lower is better)
Translates to: MICGSPSSRLRL*FGRLMKDRVET
Trigger: AGTCTCCACGCGGTCCTTCATCAACCGCCCGAACCAGAGCCGGAGGCGGGAGGACGGGCTGCCGCAGATCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399848.7
ENST00000435606.1
ENST00000586765.1
ENST00000678400.1
CDS CCA 72 bp GGGAGAGCGCGAACTCAGCGTGTAGGGGCCCGCGTTTaGGGAATTCTCGGAAACGGGCGGGCTGGGCCATCA +
Preference number: 6 (lower is better)
Translates to: GRARTQRVGARV*GILGNGRAGPS
Trigger: TGATGGCCCAGCCCGCCCGTTTCCGAGAATTCCCCAAACGCGGGCCCCTACACGCTGAGTTCGCGCTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS CCA 72 bp AGGTCGCCTGCAGGTGCGCACGGAAGCGGCCGAGGTTaGGAAGACCCGTCCCCTCGTTCTTCCTTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: RSPAGAHGSGRG*EDPSPRSSLER
Trigger: CCTCTCCAAGGAAGAACGAGGGGACGGGTCTTCCCAACCTCGGCCGCTTCCGTGCGCACCTGCAGGCGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CAA 72 bp GAGGTCGCCTGCAGGTGCGCACGGAAGCGGCCGAGGTaGGGAAGACCCGTCCCCTCGTTCTTCCTTGGAGAG +
Preference number: 6 (lower is better)
Translates to: EVACRCARKRPR*GRPVPSFFLGE
Trigger: CTCTCCAAGGAAGAACGAGGGGACGGGTCTTCCCAACCTCGGCCGCTTCCGTGCGCACCTGCAGGCGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS TCA 72 bp CGCACCGTCCCAGGTGGAGCGCCGGGTATCCTCGGGTaGCCGCCTCGAGCTCCAAAGCAGTTTCAGGTGAAC +
Preference number: 6 (lower is better)
Translates to: RTVPGGAPGILG*PPRAPKQFQVN
Trigger: GTTCACCTGAAACTGCTTTGGAGCTCGAGGCGGTCACCCGAGGATACCCGGCGCTCCACCTGGGACGGTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679091.1
ENST00000679303.1
CDS GCA 72 bp GCCTTATTTCCCGAAAAACCAGCAAACCCGGCCAAGTaGCCACAGGAGCCGCCGTCCAGTCCGGCTGCGCCC +
Preference number: 6 (lower is better)
Translates to: ALFPEKPANPAK*PQEPPSSPAAP
Trigger: GGGCGCAGCCGGACTGGACGGCGGCTCCTGTGGGCACTTGGCCGGGTTTGCTGGTTTTTCGGGAAATAAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS GCA 72 bp CAGTCAGCCGTAGCCAGGAACGCCGCCAGGTCCATCTaGGGGGCACTCAGAGGGGCTGAGCGGTTCCTGAAA +
Preference number: 6 (lower is better)
Translates to: QSAVARNAARSI*GALRGAERFLK
Trigger: TTTCAGGAACCGCTCAGCCCCTCTGAGTGCCCCGCAGATGGACCTGGCGGCGTTCCTGGCTACGGCTGACTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS GCA 72 bp CCAGGGATCTGCCCACGGGTCTGGCCAGGACTGCGGTaGTGGGCTTGCTTCAGAGCAGTTCCCTCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: PGICPRVWPGLR*WACFRAVPSPP
Trigger: TGGAGGAGAGGGAACTGCTCTGAAGCAAGCCCAGCACCGCAGTCCTGGCCAGACCCGTGGGCAGATCCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676891.1
CDS GCA 72 bp GGACTCCAGGGATCTGCCCACGGGTCTGGCCAGGACTaGGGTGCTGGGCTTGCTTCAGAGCAGTTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: GLQGSAHGSGQD*GAGLASEQFPL
Trigger: GAGAGGGAACTGCTCTGAAGCAAGCCCAGCACCGCAGTCCTGGCCAGACCCGTGGGCAGATCCCTGGAGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676891.1
CDS CCA 72 bp GGGACCGGCAGGGGTCTGCGGACGTGCCAGCGGGAGTaGAAATGGGAAACCGTTGACCCTGGTGATTCCACC +
Preference number: 6 (lower is better)
Translates to: GTGRGLRTCQRE*KWETVDPGDST
Trigger: GGTGGAATCACCAGGGTCAACGGTTTCCCATTTCCACTCCCGCTGGCACGTCCGCAGACCCCTGCCGGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 72 bp CACTTGGCCGCTCCCCGCGCTCTGGGGAGTCTGGTCTaGGGAGTCGATTTCTCCAACTGTGCACCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: HLAAPRALGSLV*GVDFSNCAPAG
Trigger: GCCAGCAGGTGCACAGTTGGAGAAATCGACTCCCCAGACCAGACTCCCCAGAGCGCGGGGAGCGGCCAAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CAA 90 bp TGTGGGCTGGGCCCAGGGTCCCCGTGCTGTATGCAACCTAGGGACTaGGTGCCCTGTGTCCCAGCCACACCAGAAGTGGCTGAAAGGGGC +
Preference number: 6 (lower is better)
Translates to: CGLGPGSPCCMQPRD*VPCVPATPEVAERG
Trigger: GCCCCTTTCAGCCACTTCTGGTGTGGCTGGGACACAGGGCACCAAGTCCCTAGGTTGCATACAGCACGGGGACCCTGGGCCCAGCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp GCGGCTCTTGCCACCGAGCTCTGTACTGGCAAGGCGTaGGGTCCTAACCGCAGCAGGAAACACTGCGCGCTC +
Preference number: 6 (lower is better)
Translates to: AALATELCTGKA*GPNRSRKHCAL
Trigger: GAGCGCGCAGTGTTTCCTGCTGCGGTTAGGACCTCACGCCTTGCCAGTACAGAGCTCGGTGGCAAGAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS GCA 72 bp ACCAGCTTCCGGCATACTGCTCCCCGGACAAGCCTGTaGTCCAACTCTTGCGCTGTCCCGTCGAGGAAGCCG +
Preference number: 6 (lower is better)
Translates to: TSFRHTAPRTSL*SNSCAVPSRKP
Trigger: CGGCTTCCTCGACGGGACAGCGCAAGAGTTGGAGCACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS GCA 72 bp CCTGGAATCAGTGGCAAACGTATACGGCGGTCCAGCTaGTCGGAGACGAAGGGTGGGCTCAGGGACCGCCTG +
Preference number: 6 (lower is better)
Translates to: PGISGKRIRRSS*SETKGGLRDRL
Trigger: CAGGCGGTCCCTGAGCCCACCCTTCGTCTCCGAGCAGCTGGACCGCCGTATACGTTTGCCACTGATTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS GCA 72 bp CACGCGGGTGCTCCTTGTCCCAGCCGCAGCTCTCTGTaGTCCGCCTCTGAAACCAGGACGCAAGGTCACAGT +
Preference number: 6 (lower is better)
Translates to: HAGAPCPSRSSL*SASETRTQGHS
Trigger: ACTGTGACCTTGCGTCCTGGTTTCAGAGGCGGAGCACAGAGAGCTGCGGCTGGGACAAGGAGCACCCGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586222.2
CDS GCA 72 bp CTGGCCTGCAGACATGGAGAGCAGACAGGGTCATCATaGCCAACAGGAAGCAGGCGGAGGCCCAGGAGCCAC +
Preference number: 6 (lower is better)
Translates to: LACRHGEQTGSS*PTGSRRRPRSH
Trigger: GTGGCTCCTGGGCCTCCGCCTGCTTCCTGTTGGGCATGATGACCCTGTCTGCTCTCCATGTCTGCAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp CGGCGCTCCATCTCTTCACGCCGAAGCCACGGCGACTaGGGAGGAGTGCAAGGCTGTCTAGGAGCTGACATC +
Preference number: 6 (lower is better)
Translates to: RRSISSRRSHGD*GGVQGCLGADI
Trigger: GATGTCAGCTCCTAGACAGCCTTGCACTCCTCCGCAGTCGCCGTGGCTTCGGCGTGAAGAGATGGAGCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 72 bp CAGACTATGTGGTGCAAGCTGCCTCAGGAGGTCGCCTaGAGGTGCGCACGGAAGCGGCCGAGGTTGGGAAGA +
Preference number: 6 (lower is better)
Translates to: QTMWCKLPQEVA*RCARKRPRLGR
Trigger: TCTTCCCAACCTCGGCCGCTTCCGTGCGCACCTGCAGGCGACCTCCTGAGGCAGCTTGCACCACATAGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 72 bp GGTTTTGTGGGCTGGGCCCAGGGTCCCCGTGCTGTATaGAACCTAGGGACTTGGTGCCCTGTGTCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: GFVGWAQGPRAV*NLGTWCPVSQP
Trigger: TGGCTGGGACACAGGGCACCAAGTCCCTAGGTTGCATACAGCACGGGGACCCTGGGCCCAGCCCACAAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp GGCAGGGGTCTGCGGACGTGCCAGCGGGAGTGGAAATaGGAAACCGTTGACCCTGGTGATTCCACCCCGACA +
Preference number: 6 (lower is better)
Translates to: GRGLRTCQREWK*ETVDPGDSTPT
Trigger: TGTCGGGGTGGAATCACCAGGGTCAACGGTTTCCCATTTCCACTCCCGCTGGCACGTCCGCAGACCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 72 bp CTCCAAGGCAGGTTCTCCAGGACGCCACCCTGGCCTTaGCACAGCCATGGCTCTCCAGGGCCCCCTTCATTT +
Preference number: 6 (lower is better)
Translates to: LQGRFSRTPPWP*HSHGSPGPPSF
Trigger: AAATGAAGGGGGCCCTGGAGAGCCATGGCTGTGCCAAGGCCAGGGTGGCGTCCTGGAGAACCTGCCTTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CAA 72 bp ACCACCCACCCAGCAGAAATGAGAAGACAGCAAGCGTaGGGGTGCGTGTGGGACCGGCAGGGGTCTGCGGAC +
Preference number: 6 (lower is better)
Translates to: TTHPAEMRRQQA*GCVWDRQGSAD
Trigger: GTCCGCAGACCCCTGCCGGTCCCACACGCACCCCAACGCTTGCTGTCTTCTCATTTCTGCTGGGTGGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp ACAGAGAGGAGGTGTACGCACTGGCACTCCTTCCGCTaGCTCTGCTGCTCCGCGTTCTCCCTGGTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: TERRCTHWHSFR*LCCSAFSLVEQ
Trigger: CTGCTCCACCAGGGAGAACGCGGAGCAGCAGAGTCAGCGGAAGGAGTGCCAGTGCGTACACCTCCTCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp GGCCCTGCCGGGACAGATGCCCTTCATGCTCCTTTCTaGCTGCATCCCCGACCCAACAGCAAGGGCCAGAGA +
Preference number: 6 (lower is better)
Translates to: GPAGTDALHAPF*LHPRPNSKGQR
Trigger: TCTCTGGCCCTTGCTGTTGGGTCGGGGATGCAGTCAGAAAGGAGCATGAAGGGCATCTGTCCCGGCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp CAGAGGGGGTCTGCACTCTGTTCCCCTGACAGGCCCTaGCCTGGCCCTGTAACACTCATGACCAGAGCATGG +
Preference number: 6 (lower is better)
Translates to: QRGSALCSPDRP*PGPVTLMTRAW
Trigger: CCATGCTCTGGTCATGAGTGTTACAGGGCCAGGGCAGGGCCTGTCAGGGGAACAGAGTGCAGACCCCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp CAGGATGACAGTACCCGGGAGGCTCGCATGTGTGGGTaGATGCCGTGGCAGGAGAAGGCTTCCGAAGAGCCA +
Preference number: 6 (lower is better)
Translates to: QDDSTREARMCG*MPWQEKASEEP
Trigger: TGGCTCTTCGGAAGCCTTCTCCTGCCACGGCATGCACCCACACATGCGAGCCTCCCGGGTACTGTCATCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592657.1
CDS GCA 72 bp CGCAGGCAAGCGGGAGTTCTGGTTCCCACCCAGCTCTaGTCTCCTGCTCATGTTCTGCTTCCAGGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: RRQAGVLVPTQL*SPAHVLLPGPP
Trigger: AGGAGGCCCTGGAAGCAGAACATGAGCAGGAGAGCAGAGCTGGGTGGGAACCAGAACTCCCGCTTGCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS GCA 72 bp CAAGGAGAAGGCCCATGCCAATCAAGCCTGAGCCCCTaGCCCTCTCTCCAGGCATCCCAACAGCCTGACCTG +
Preference number: 6 (lower is better)
Translates to: QGEGPCQSSLSP*PSLQASQQPDL
Trigger: CAGGTCAGGCTGTTGGGATGCCTGGAGAGAGGGGCAGGGGCTCAGGCTTGATTGGCATGGGCCTTCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 72 bp GGCCAGGCGTTCTACGGGGCTGGAGAAGAAGGTGTTTaGCAAGGAGCTGCTACTCCCCAGCTGGACTGCAGG +
Preference number: 6 (lower is better)
Translates to: GQAFYGAGEEGV*QGAATPQLDCR
Trigger: CCTGCAGTCCAGCTGGGGAGTAGCAGCTCCTTGGCAAACACCTTCTTCTCCAGCCCCGTAGAACGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677387.1
ENST00000678223.1
CDS CCA 72 bp CCTTCCGCTGACTCTGCTGCTCCGCGTTCTCCCTGGTaGAGCAGGCCCTGGTGGCTTCTGCTACATATCACC +
Preference number: 6 (lower is better)
Translates to: PSADSAAPRSPW*SRPWWLLLHIT
Trigger: GGTGATATGTAGCAGAAGCCACCAGGGCCTGCTCCACCAGGGAGAACGCGGAGCAGCAGAGTCAGCGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 72 bp AGTACCCGGGAGGCTCGCATGTGTGGGTGCATGCCGTaGCAGGAGAAGGCTTCCGAAGAGCCATGCATGCGT +
Preference number: 6 (lower is better)
Translates to: STREARMCGCMP*QEKASEEPCMR
Trigger: ACGCATGCATGGCTCTTCGGAAGCCTTCTCCTGCCACGGCATGCACCCACACATGCGAGCCTCCCGGGTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592657.1
CDS CCA 72 bp GGCCCAGAGTACAGGTGGGAGAAGAACCGTTCCTCCTaGTCATTCCGCCCCCTAGAGTGGGCACAGCACGTC +
Preference number: 6 (lower is better)
Translates to: GPEYRWEKNRSS*SFRPLEWAQHV
Trigger: GACGTGCTGTGCCCACTCTAGGGGGCGGAATGACCAGGAGGAACGGTTCTTCTCCCACCTGTACTCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS CCA 72 bp AGGGGCTCATGGAGAACAGAACATGGCTGCCCTGCCTaGATCCCTTCAGAGCCTCAGGCCCAGCTCAGGACC +
Preference number: 6 (lower is better)
Translates to: RGSWRTEHGCPA*IPSEPQAQLRT
Trigger: GGTCCTGAGCTGGGCCTGAGGCTCTGAAGGGATCCAGGCAGGGCAGCCATGTTCTGTTCTCCATGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677744.1
ENST00000678223.1
CDS CCA 72 bp GCTCCGCTGCACTCTCAGCAAGATGGGTGTGGGAGATaGGCTAAGGGCGGTGGTGGTCCTCAAGGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: APLHSQQDGCGR*AKGGGGPQGKP
Trigger: TGGCTTCCCTTGAGGACCACCACCGCCCTTAGCCCATCTCCCACACCCATCTTGCTGAGAGTGCAGCGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678459.1
CDS CAA 90 bp CCCTCTCCACATCCTCTAACTGATGGGAGCAGCTCCCAGCGGCTCTaGCCACCGAGCTCTGTACTGGCAAGGCGTGAGGTCCTAACCGCA +
Preference number: 6 (lower is better)
Translates to: PSPHPLTDGSSSQRL*PPSSVLARREVLTA
Trigger: TGCGGTTAGGACCTCACGCCTTGCCAGTACAGAGCTCGGTGGCAAGAGCCGCTGGGAGCTGCTCCCATCAGTTAGAGGATGTGGAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585931.5
ENST00000587757.5
CDS CAA 90 bp TATCATACTACCACCCACCCAGCAGAAATGAGAAGACAGCAAGCGTaGGGGTGCGTGTGGGACCGGCAGGGGTCTGCGGACGTGCCAGCG +
Preference number: 6 (lower is better)
Translates to: YHTTTHPAEMRRQQA*GCVWDRQGSADVPA
Trigger: CGCTGGCACGTCCGCAGACCCCTGCCGGTCCCACACGCACCCCAACGCTTGCTGTCTTCTCATTTCTGCTGGGTGGGTGGTAGTATGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp CATCTACACAGCTGCCAAGCTAACCAGCACGGGCCCTaGCCCACCTCCCACAACTCGGGGAAGGCACTGTCA +
Preference number: 6 (lower is better)
Translates to: HLHSCQANQHGP*PTSHNSGKALS
Trigger: TGACAGTGCCTTCCCCGAGTTGTGGGAGGTGGGTCAGGGCCCGTGCTGGTTAGCTTGGCAGCTGTGTAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS TCA 72 bp CTGGAGGGCCGCCCCAGTCAGTGGAGATCCCACTCCTaGGTAGGGTCTGACAATGCCCATTGGCCATCCTGT +
Preference number: 6 (lower is better)
Translates to: LEGRPSQWRSHS*VGSDNAHWPSC
Trigger: ACAGGATGGCCAATGGGCATTGTCAGACCCTACTCAGGAGTGGGATCTCCACTGACTGGGGCGGCCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677387.1
ENST00000678223.1
CDS TCA 72 bp GAACATCCACAAGGCGTGCGGTCTGGGTGTTCCCCGTaGGCTCTTTCCACCCCAGCTTCCCGAGAGCCAATC +
Preference number: 6 (lower is better)
Translates to: EHPQGVRSGCSP*ALSTPASREPI
Trigger: GATTGGCTCTCGGGAAGCTGGGGTGGAAAGAGCTCACGGGGAACACCCAGACCGCACGCCTTGTGGATGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 72 bp ACCCCTTCACAAAGGCAAGTGCCGGGCCGGGCTGGGTaGTTGTCGCTTCCTGTTTATTCCAAGGTGAGGGGC +
Preference number: 6 (lower is better)
Translates to: TPSQRQVPGRAG*LSLPVYSKVRG
Trigger: GCCCCTCACCTTGGAATAAACAGGAAGCGACAAGCACCCAGCCCGGCCCGGCACTTGCCTTTGTGAAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399848.7
ENST00000590115.1
ENST00000677055.1
CDS GCA 72 bp CTGCCGGGACAGATGCCCTTCATGCTCCTTTCTGACTaGATCCCCGACCCAACAGCAAGGGCCAGAGAGTCC +
Preference number: 6 (lower is better)
Translates to: LPGQMPFMLLSD*IPDPTARARES
Trigger: GGACTCTCTGGCCCTTGCTGTTGGGTCGGGGATGCAGTCAGAAAGGAGCATGAAGGGCATCTGTCCCGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp ATGACAGTACCCGGGAGGCTCGCATGTGTGGGTGCATaGCGTGGCAGGAGAAGGCTTCCGAAGAGCCATGCA +
Preference number: 6 (lower is better)
Translates to: MTVPGRLACVGA*RGRRRLPKSHA
Trigger: TGCATGGCTCTTCGGAAGCCTTCTCCTGCCACGGCATGCACCCACACATGCGAGCCTCCCGGGTACTGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592657.1
CDS GCA 72 bp CGCAGCCAGACAGGTCCACCACTGCAGAGCAGCTCCTaGCGCGACAAGCTCTGCTTCCCAGACATCATCACA +
Preference number: 6 (lower is better)
Translates to: RSQTGPPLQSSS*RDKLCFPDIIT
Trigger: TGTGATGATGTCTGGGAAGCAGAGCTTGTCGCGGCAGGAGCTGCTCTGCAGTGGTGGACCTGTCTGGCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590115.1
CDS GCA 72 bp CTTTTCCACCGGCCTCTCCTCCAGATGAGTCCTGGCTaGATTCAGAGCTGCACGGACCCCTGGCCTAGAGGT +
Preference number: 6 (lower is better)
Translates to: LFHRPLLQMSPG*IQSCTDPWPRG
Trigger: ACCTCTAGGCCAGGGGTCCGTGCAGCTCTGAATGCAGCCAGGACTCATCTGGAGGAGAGGCCGGTGGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 72 bp CTGGGCACCAGCCAGACTGTGTGGTTCCCTACAAACTaGCAGCCAGGGCCAAATCACCAGCACACTGGGGTG +
Preference number: 6 (lower is better)
Translates to: LGTSQTVWFPTN*QPGPNHQHTGV
Trigger: CACCCCAGTGTGCTGGTGATTTGGCCCTGGCTGGCAGTTTGTAGGGAACCACACAGTCTGGCTGGTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 72 bp ACTGAGACCCCATGTCACAGACTATGTGGTGCAAGCTaGCTCAGGAGGTCGCCTGCAGGTGCGCACGGAAGC +
Preference number: 6 (lower is better)
Translates to: TETPCHRLCGAS*LRRSPAGAHGS
Trigger: GCTTCCGTGCGCACCTGCAGGCGACCTCCTGAGGCAGCTTGCACCACATAGTCTGTGACATGGGGTCTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 72 bp TTCCTCCCGGCTCAGTTGAAGATGCCCGGAGGCGGGTaGTCGGTCACCAGGAGACAGTTCTCTTCGTCACTG +
Preference number: 6 (lower is better)
Translates to: FLPAQLKMPGGG*SVTRRQFSSSL
Trigger: CAGTGACGAAGAGAACTGTCTCCTGGTGACCGAGCACCCGCCTCCGGGCATCTTCAACTGAGCCGGGAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677304.1
CDS CCA 72 bp AGTCCTAGGCAGGAAAGGTCCTCTGGAGAGAGGAAATaGCACACGCGCAAGCACGGAGGCATGAGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: SPRQERSSGERK*HTRKHGGMRGQ
Trigger: CTGGCCCCTCATGCCTCCGTGCTTGCGCGTGTGCCATTTCCTCTCTCCAGAGGACCTTTCCTGCCTAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586207.5
CDS CCA 72 bp AGTTTGTGCGAGGACACTTGGCCGCTCCCCGCGCTCTaGGGAGTCTGGTCTGGGGAGTCGATTTCTCCAACT +
Preference number: 6 (lower is better)
Translates to: SLCEDTWPLPAL*GVWSGESISPT
Trigger: AGTTGGAGAAATCGACTCCCCAGACCAGACTCCCCAGAGCGCGGGGAGCGGCCAAGTGTCCTCGCACAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 72 bp CACAGGGCGAAGAGCACTGCGGCCTGCACTTGGATCTaGTCACCAGTGACATCGTCCAGTCCTCGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: HRAKSTAACTWI*SPVTSSSPRLL
Trigger: GAGAAGCCGAGGACTGGACGATGTCACTGGTGACCAGATCCAAGTGCAGGCCGCAGTGCTCTTCGCCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS CCA 72 bp CCTCCCTTCCTAGAGGGGCTCATGGAGAACAGAACATaGCTGCCCTGCCTGGATCCCTTCAGAGCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: PPFLEGLMENRT*LPCLDPFRASG
Trigger: GCCTGAGGCTCTGAAGGGATCCAGGCAGGGCAGCCATGTTCTGTTCTCCATGAGCCCCTCTAGGAAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677744.1
ENST00000678223.1
CDS CCA 72 bp AGCTCCGCATCAACTCCCTGGGTGGGCTTCGGCCCCTaGGTTCACCTCATTGCTGTCACACAGGGATGGCAA +
Preference number: 6 (lower is better)
Translates to: SSASTPWVGFGP*VHLIAVTQGWQ
Trigger: TTGCCATCCCTGTGTGACAGCAATGAGGTGAACCCAGGGGCCGAAGCCCACCCAGGGAGTTGATGCGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS CCA 72 bp TCTTGGGCGAGGGCTCTGGGCACCAGCCAGACTGTGTaGTTCCCTACAAACTGCCAGCCAGGGCCAAATCAC +
Preference number: 6 (lower is better)
Translates to: SWARALGTSQTV*FPTNCQPGPNH
Trigger: GTGATTTGGCCCTGGCTGGCAGTTTGTAGGGAACCACACAGTCTGGCTGGTGCCCAGAGCCCTCGCCCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CCA 72 bp CAGTGTGTCTCCCCACAGGGACCACTGGTCTCACACTaGAAGACATCCGCATGGTCCCTGGTCTGCACCGGT +
Preference number: 6 (lower is better)
Translates to: QCVSPQGPLVSH*KTSAWSLVCTG
Trigger: ACCGGTGCAGACCAGGGACCATGCGGATGTCTTCCAGTGTGAGACCAGTGGTCCCTGTGGGGAGACACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp CCCCCAAACCTGGGATCCCTCCCAGGATCCCAGCACTaGCCACCTTGGTGTCACTTCCCTGATAGCAACCTG +
Preference number: 6 (lower is better)
Translates to: PPNLGSLPGSQH*PPWCHFPDSNL
Trigger: CAGGTTGCTATCAGGGAAGTGACACCAAGGTGGCCAGTGCTGGGATCCTGGGAGGGATCCCAGGTTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp CCAGGAGGAAGGCTGTACCCTGCAAAGCCACAGGAGTaGAGCTGCCCAAGGCCACAGGAAGCCACCTCTTAC +
Preference number: 6 (lower is better)
Translates to: PGGRLYPAKPQE*SCPRPQEATSY
Trigger: GTAAGAGGTGGCTTCCTGTGGCCTTGGGCAGCTCCACTCCTGTGGCTTTGCAGGGTACAGCCTTCCTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp AGGCCAGGCGTTCTACGGGGCTGGAGAAGAAGGTGTTaGCCAAGGAGCTGCTACTCCCCAGCTGGACTGCAG +
Preference number: 6 (lower is better)
Translates to: RPGVLRGWRRRC*PRSCYSPAGLQ
Trigger: CTGCAGTCCAGCTGGGGAGTAGCAGCTCCTTGGCAAACACCTTCTTCTCCAGCCCCGTAGAACGCCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000677387.1
ENST00000678223.1
CDS TCA 72 bp GCAGCCACTCCACCGGATTACAGCAATGCTGGGCTGTaGAAGGACGTCCCTTCCGGCAGAGGCAACTCGGAA +
Preference number: 6 (lower is better)
Translates to: AATPPDYSNAGL*KDVPSGRGNSE
Trigger: TTCCGAGTTGCCTCTGCCGGAAGGGACGTCCTTTCACAGCCCAGCATTGCTGTAATCCGGTGGAGTGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000677387.1
ENST00000678223.1
CDS GCA 72 bp AACTCCAGCTCCGAGTTGAAGATGCCCGGAGGCGGGTaGTCGGTCACCAGGAGACAGTTCTCTTCGTCACTG +
Preference number: 6 (lower is better)
Translates to: NSSSELKMPGGG*SVTRRQFSSSL
Trigger: CAGTGACGAAGAGAACTGTCTCCTGGTGACCGAGCACCCGCCTCCGGGCATCTTCAACTCGGAGCTGGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676891.1
ENST00000679091.1
CDS GCA 72 bp ACCCAACAGCAAGGGCCAGAGAGTCCTTCAGCCCAATaGCCACCTGTAAGTGTAGCACACCAGGGACAGGGG +
Preference number: 6 (lower is better)
Translates to: TQQQGPESPSAQ*PPVSVAHQGQG
Trigger: CCCCTGTCCCTGGTGTGCTACACTTACAGGTGGGCATTGGGCTGAAGGACTCTCTGGCCCTTGCTGTTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp TCTGGTCTGGGGAGTCGATTTCTCCAACTGTGCACCTaGTGGCATGATGGGCACCTGGGTGTGTGTGCCCCA +
Preference number: 6 (lower is better)
Translates to: SGLGSRFLQLCT*WHDGHLGVCAP
Trigger: TGGGGCACACACACCCAGGTGCCCATCATGCCAGCAGGTGCACAGTTGGAGAAATCGACTCCCCAGACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp GGGGAGTCTGGTCTGGGGAGTCGATTTCTCCAACTGTaGACCTGCTGGCATGATGGGCACCTGGGTGTGTGT +
Preference number: 6 (lower is better)
Translates to: GESGLGSRFLQL*TCWHDGHLGVC
Trigger: ACACACACCCAGGTGCCCATCATGCCAGCAGGTGCACAGTTGGAGAAATCGACTCCCCAGACCAGACTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp CAGGGTCCCCGTGCTGTATGCAACCTAGGGACTTGGTaGCCTGTGTCCCAGCCACACCAGAAGTGGCTGAAA +
Preference number: 6 (lower is better)
Translates to: QGPRAVCNLGTW*PVSQPHQKWLK
Trigger: TTTCAGCCACTTCTGGTGTGGCTGGGACACAGGGCACCAAGTCCCTAGGTTGCATACAGCACGGGGACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp AGCTACCCATCAACTCCCTGGGTGGGCTTCGGCCCCTaGGTTCACCTCATTGCTGTCACACAGGGATGGCAA +
Preference number: 6 (lower is better)
Translates to: SYPSTPWVGFGP*VHLIAVTQGWQ
Trigger: TTGCCATCCCTGTGTGACAGCAATGAGGTGAACCCAGGGGCCGAAGCCCACCCAGGGAGTTGATGGGTAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593236.1
ENST00000678223.1
CDS CCA 72 bp ATGATTTGGGCGAACTCCAGCTCCGCATCAACTCCCTaGGTGGGCTTCGGCCCCTGGGTTCACCTCATTGCT +
Preference number: 6 (lower is better)
Translates to: MIWANSSSASTP*VGFGPWVHLIA
Trigger: AGCAATGAGGTGAACCCAGGGGCCGAAGCCCACCCAGGGAGTTGATGCGGAGCTGGAGTTCGCCCAAATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS CCA 72 bp TACAAACTGCCAGCCAGGGCCAAATCACCAGCACACTaGGGTGTCCCACTTCTCCCCGCTCACTGCAAGACG +
Preference number: 6 (lower is better)
Translates to: YKLPARAKSPAH*GVPLLPAHCKT
Trigger: CGTCTTGCAGTGAGCGGGGAGAAGTGGGACACCCCAGTGTGCTGGTGATTTGGCCCTGGCTGGCAGTTTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CCA 72 bp AGAGAGGCGCTGCCGCCGCCCACTTCAAACTGGCGGTaGGTGTGCCAAACGATGGAAGAAAAACAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: REALPPPTSNWR*VCQTMEEKQLL
Trigger: GAGGAGCTGTTTTTCTTCCATCGTTTGGCACACCCACCGCCAGTTTGAAGTGGGCGGCGGCAGCGCCTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp CCTGGTAGAGAGGCGCTGCCGCCGCCCACTTCAAACTaGCGGTGGGTGTGCCAAACGATGGAAGAAAAACAG +
Preference number: 6 (lower is better)
Translates to: PGREALPPPTSN*RWVCQTMEEKQ
Trigger: CTGTTTTTCTTCCATCGTTTGGCACACCCACCGCCAGTTTGAAGTGGGCGGCGGCAGCGCCTCTCTACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp CAGGGACCACTGGTCTCACACTGGAAGACATCCGCATaGTCCCTGGTCTGCACCGGTGCCTTCAGATCCCTT +
Preference number: 6 (lower is better)
Translates to: QGPLVSHWKTSA*SLVCTGAFRSL
Trigger: AAGGGATCTGAAGGCACCGGTGCAGACCAGGGACCATGCGGATGTCTTCCAGTGTGAGACCAGTGGTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp CAGGCTGTGACTTCAGAGGGTGGAAGCCCCAAGCCTTaGCAGCTTCCACATGGTGTTGAGCCTGCGGGTACA +
Preference number: 6 (lower is better)
Translates to: QAVTSEGGSPKP*QLPHGVEPAGT
Trigger: TGTACCCGCAGGCTCAACACCATGTGGAAGCTGCCAAGGCTTGGGGCTTCCACCCTCTGAAGTCACAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp CCTTCACAAAGGCAAGTGCCGGGCCGGGCTGGGTGCTaGTCGCTTCCTGTTTATTCCAAGGTGAGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: PSQRQVPGRAGC*SLPVYSKVRGR
Trigger: TCTGCCCCTCACCTTGGAATAAACAGGAAGCGACAAGCACCCAGCCCGGCCCGGCACTTGCCTTTGTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399848.7
ENST00000590115.1
ENST00000677055.1
CDS CAA 72 bp CACCATCACCGTGACCACCACGACGATGATGATGATTaGGGCGAACTCCAGCTCCGCAAGGCAGGACACGCG +
Preference number: 6 (lower is better)
Translates to: HHHRDHHDDDDD*GELQLRKAGHA
Trigger: CGCGTGTCCTGCCTTGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585931.5
CDS TCA 72 bp AGCCAGGGTCACTCTCTAAGAGCCCAGGCAGCTCACTaGAAGCCTTGTCCTTCCCATCCCTCTCACCTGGAC +
Preference number: 6 (lower is better)
Translates to: SQGHSLRAQAAH*KPCPSHPSHLD
Trigger: GTCCAGGTGAGAGGGATGGGAAGGACAAGGCTTTCAGTGAGCTGCCTGGGCTCTTAGAGAGTGACCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp GACCCACCTCCCACAACTCGGGGAAGGCACTGTCACTaGGACCCCATGTCACAGACTATGTGGTGCAAGCTG +
Preference number: 6 (lower is better)
Translates to: DPPPTTRGRHCH*DPMSQTMWCKL
Trigger: CAGCTTGCACCACATAGTCTGTGACATGGGGTCTCAGTGACAGTGCCTTCCCCGAGTTGTGGGAGGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 72 bp GTATCAGCAGGGCCCACCCCAGGTGCTAGACTCAAATaGTGTGGCTCCGACCGCAGACTGTGGCTACCAATT +
Preference number: 6 (lower is better)
Translates to: VSAGPTPGARLK*CGSDRRLWLPI
Trigger: AATTGGTAGCCACAGTCTGCGGTCGGAGCCACAGCATTTGAGTCTAGCACCTGGGGTGGGCCCTGCTGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS GCA 72 bp GGGCAGCTCCAAGCAGTAATAGTTATGCCAGCACTGTaGCAGCCAGACACCTGGAGAGCAAAGCACAGGCCC +
Preference number: 6 (lower is better)
Translates to: GQLQAVIVMPAL*QPDTWRAKHRP
Trigger: GGGCCTGTGCTTTGCTCTCCAGGTGTCTGGCTGGCACAGTGCTGGCATAACTATTACTGCTTGGAGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp TGCCATGCCAGAAAGTTGAAGATGCCCGGAGGCGGGTaGTCGGTCACCAGGAGACAGTTCTCTTCGTCACTG +
Preference number: 6 (lower is better)
Translates to: CHARKLKMPGGG*SVTRRQFSSSL
Trigger: CAGTGACGAAGAGAACTGTCTCCTGGTGACCGAGCACCCGCCTCCGGGCATCTTCAACTTTCTGGCATGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678459.1
CDS GCA 72 bp CTTCCTCATTCTCCCTTGCTGCCGCCCTGTAAGAAGTaGCTTTTGCCCTCAGCCACGATTCTGAGGCCTCCC +
Preference number: 6 (lower is better)
Translates to: LPHSPLLPPCKK*LLPSATILRPP
Trigger: GGGAGGCCTCAGAATCGTGGCTGAGGGCAAAAGGCACTTCTTACAGGGCGGCAGCAAGGGAGAATGAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp ACCATCACCGTGACCACCACGACGATGATGATGATTTaGGCGAACTCCAGCTCCGCAAGGCAGGACACGCGA +
Preference number: 6 (lower is better)
Translates to: TITVTTTTMMMI*ANSSSARQDTR
Trigger: TCGCGTGTCCTGCCTTGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585931.5
CDS CCA 72 bp AGAAGAGCATCAACTCCCTGGGTGGGCTTCGGCCCCTaGGTTCACCTCATTGCTGTCACACAGGGATGGCAA +
Preference number: 6 (lower is better)
Translates to: RRASTPWVGFGP*VHLIAVTQGWQ
Trigger: TTGCCATCCCTGTGTGACAGCAATGAGGTGAACCCAGGGGCCGAAGCCCACCCAGGGAGTTGATGCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 72 bp CCTGGGGCACAGGCAGGGCTCCACAATGACTGTCGCTaGCTGGTTACAAGAAATAGGGGGTTTGCCACATCC +
Preference number: 6 (lower is better)
Translates to: PGAQAGLHNDCR*LVTRNRGFATS
Trigger: GGATGTGGCAAACCCCCTATTTCTTGTAACCAGCCAGCGACAGTCATTGTGGAGCCCTGCCTGTGCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 72 bp GGATGGCCAGGATCTGGAAGCAGCTCTGTGGTCACGTaGCAGGAATGGTGTGGGACAGAGAAGCACGTTCAG +
Preference number: 6 (lower is better)
Translates to: GWPGSGSSSVVT*QEWCGTEKHVQ
Trigger: CTGAACGTGCTTCTCTGTCCCACACCATTCCTGCCACGTGACCACAGAGCTGCTTCCAGATCCTGGCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS CCA 72 bp AGCTCTTCATGGGCAGGCCTATTTGGGGGTCAGGGGTaGGCTGTGACACAAAGGCAGGATCACACAGCTCCT +
Preference number: 6 (lower is better)
Translates to: SSSWAGLFGGQG*AVTQRQDHTAP
Trigger: AGGAGCTGTGTGATCCTGCCTTTGTGTCACAGCCCACCCCTGACCCCCAAATAGGCCTGCCCATGAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677867.1
CDS CAA 72 bp CACCATCACCGTGACCACCACGACGATGATGATGATTaGGGCGAACTCCAGCTCCGCACGTGGCAGGAATGG +
Preference number: 6 (lower is better)
Translates to: HHHRDHHDDDDD*GELQLRTWQEW
Trigger: CCATTCCTGCCACGTGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678309.1
CDS TCA 72 bp TTTCATCGTCCCAGCTACCTAACAGCGATGGAGCCGTaGACAGAGCACTCCCTGGAGAGGCCCCCATTTAGC +
Preference number: 6 (lower is better)
Translates to: FHRPSYLTAMEP*TEHSLERPPFS
Trigger: GCTAAATGGGGGCCTCTCCAGGGAGTGCTCTGTTCACGGCTCCATCGCTGTTAGGTAGCTGGGACGATGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587600.1
CDS TCA 72 bp CGGCGACTGCGGAGGAGTGCAAGGCTGTCTAGGAGCTaGCATCTAATCCAAGGAGAAGGCCCATGCCAATCA +
Preference number: 6 (lower is better)
Translates to: RRLRRSARLSRS*HLIQGEGPCQS
Trigger: TGATTGGCATGGGCCTTCTCCTTGGATTAGATGTCAGCTCCTAGACAGCCTTGCACTCCTCCGCAGTCGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS TCA 72 bp GCGAACTCCAGCTCCGCTGTGAAAGCATTTGTGGCCTaGAAACCAGCTTCCGGCATACTGCTCCCCGGACAA +
Preference number: 6 (lower is better)
Translates to: ANSSSAVKAFVA*KPASGILLPGQ
Trigger: TTGTCCGGGGAGCAGTATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTTCACAGCGGAGCTGGAGTTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000677055.1
ENST00000679167.1
ENST00000679177.1
CDS TCA 72 bp ACTGGCCACCTTGGTGTCACTTCCCTGATAGCAACCTaGAAGGCCAGCAGAAGCTCTGACCCACAGCTTCCC +
Preference number: 6 (lower is better)
Translates to: TGHLGVTSLIAT*KASRSSDPQLP
Trigger: GGGAAGCTGTGGGTCAGAGCTTCTGCTGGCCTTTCAGGTTGCTATCAGGGAAGTGACACCAAGGTGGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp GACAATGGTGAGATGGAGCTTCAGAATCCAGTCCCCTaGTGCTGGGTAGACAGAGGTCCGGGAGGAGACAGG +
Preference number: 6 (lower is better)
Translates to: DNGEMELQNPVP*CWVDRGPGGDR
Trigger: CCTGTCTCCTCCCGGACCTCTGTCTACCCAGCATCAGGGGACTGGATTCTGAAGCTCCATCTCACCATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp AAGTGGCTGAAAGGGGCCAACATACAGTTCAGGCTGTaGCTTCAGAGGGTGGAAGCCCCAAGCCTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: KWLKGANIQFRL*LQRVEAPSLGS
Trigger: GCTGCCAAGGCTTGGGGCTTCCACCCTCTGAAGTCACAGCCTGAACTGTATGTTGGCCCCTTTCAGCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp CTTGGTGCCCTGTGTCCCAGCCACACCAGAAGTGGCTaGAAGGGGCCAACATACAGTTCAGGCTGTGACTTC +
Preference number: 6 (lower is better)
Translates to: LGALCPSHTRSG*KGPTYSSGCDF
Trigger: GAAGTCACAGCCTGAACTGTATGTTGGCCCCTTTCAGCCACTTCTGGTGTGGCTGGGACACAGGGCACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 72 bp AAGCATTTGTGGCCTGAAAACCAGCTTCCGGCATACTaGTCCCCGGACAAGCCTGTGCTCCAACTCTTGCGC +
Preference number: 6 (lower is better)
Translates to: KHLWPENQLPAY*SPDKPVLQLLR
Trigger: GCGCAAGAGTTGGAGCACAGGCTTGTCCGGGGAGCAGTATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676815.1
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000677867.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS GCA 72 bp TGGCAGAAATACAGTGCACCTCAGCTCACCATCAGCTaGAAGGGACTCTGCCTGGTGTCCCACAGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: WQKYSAPQLTIS*KGLCLVSHRLS
Trigger: ACTCAGCCTGTGGGACACCAGGCAGAGTCCCTTGCAGCTGATGGTGAGCTGAGGTGCACTGTATTTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 72 bp ACCATCACCGTGACCACCACGACGATGATGATGATTTaGGCGAACTCCAGCTCCGCATCAACTCCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: TITVTTTTMMMI*ANSSSASTPWV
Trigger: CACCCAGGGAGTTGATGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS CCA 72 bp GTGGCCTTTTTGATGAGGCCAGGCGTTCTACGGGGCTaGAGAAGAAGGTGTTTGCCAAGGAGCTGCTACTCC +
Preference number: 6 (lower is better)
Translates to: VAFLMRPGVLRG*RRRCLPRSCYS
Trigger: GGAGTAGCAGCTCCTTGGCAAACACCTTCTTCTCCAGCCCCGTAGAACGCCTGGCCTCATCAAAAAGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000677387.1
ENST00000678223.1
CDS CCA 72 bp ACCATCACCGTGACCACCACGACGATGATGATGATTTaGGCGAACTCCAGCTCCGCACGTGGCAGGAATGGT +
Preference number: 6 (lower is better)
Translates to: TITVTTTTMMMI*ANSSSARGRNG
Trigger: ACCATTCCTGCCACGTGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678309.1
CDS CAA 72 bp GTATGCCGCCACCTCATCTCAGGACCTGTTTCTATCTaGCTCTCTCCTCTCCAAGGCAGTGGGATGCGAGGG +
Preference number: 6 (lower is better)
Translates to: VCRHLISGPVSI*LSPLQGSGMRG
Trigger: CCCTCGCATCCCACTGCCTTGGAGAGGAGAGAGCAAGATAGAAACAGGTCCTGAGATGAGGTGGCGGCATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CAA 72 bp GCAGCCCCCACTACCATGAAGAGGAGCAGAGACGACTaGGCCACCCACTGTGTCCAACTAAATCCCTATGGC +
Preference number: 6 (lower is better)
Translates to: AAPTTMKRSRDD*ATHCVQLNPYG
Trigger: GCCATAGGGATTTAGTTGGACACAGTGGGTGGCCAAGTCGTCTCTGCTCCTCTTCATGGTAGTGGGGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CAA 72 bp CCACCACATGCAGTGCAAGGAGTCACTCCAGGCTCATaGACAAGAGGAGGGCCTAGTAGGCTCCTGCGGAAA +
Preference number: 6 (lower is better)
Translates to: PPHAVQGVTPGS*TRGGPSRLLRK
Trigger: TTTCCGCAGGAGCCTACTAGGCCCTCCTCTTGTCAATGAGCCTGGAGTGACTCCTTGCACTGCATGTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS CAA 72 bp CACCATCACCGTGACCACCACGACGATGATGATGATTaGGGCGAACTCCAGCTCCGCATCAACTCCCTGGGT +
Preference number: 6 (lower is better)
Translates to: HHHRDHHDDDDD*GELQLRINSLG
Trigger: ACCCAGGGAGTTGATGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677744.1
CDS CAA 72 bp CACCATCACCGTGACCACCACGACGATGATGATGATTaGGGCGAACTCCAGCTCCGCTGCACTCTCAGCAAG +
Preference number: 6 (lower is better)
Translates to: HHHRDHHDDDDD*GELQLRCTLSK
Trigger: CTTGCTGAGAGTGCAGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678459.1
CDS CAA 90 bp CTGTGGGTTCCAGAGGTGATCAGCCACAGATGGAAAAGGGAGGTCTaGGGATGCTTTCATCGTCCCAGCTACCTAACAGCGATGGAGCCG +
Preference number: 6 (lower is better)
Translates to: LWVPEVISHRWKREV*GCFHRPSYLTAMEP
Trigger: CGGCTCCATCGCTGTTAGGTAGCTGGGACGATGAAAGCATCCCAAGACCTCCCTTTTCCATCTGTGGCTGATCACCTCTGGAACCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587600.1
CDS CAA 90 bp CTGTGGGTTCCAGAGGTGATCAGCCACAGATGGAAAAGGGAGGTCTaGGGATGCTTTCATCGTCCCAGCTACCCATCAACTCCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: LWVPEVISHRWKREV*GCFHRPSYPSTPWV
Trigger: CACCCAGGGAGTTGATGGGTAGCTGGGACGATGAAAGCATCCCAAGACCTCCCTTTTCCATCTGTGGCTGATCACCTCTGGAACCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593236.1
ENST00000678223.1
CDS TCA 72 bp ACAAGAGGAGGGCCTAGTAGGCTCCTGCGGAAATCCTaGAGGCTTGGGAGATGCTGTCCACCTAACTTGCGA +
Preference number: 6 (lower is better)
Translates to: TRGGPSRLLRKS*RLGRCCPPNLR
Trigger: TCGCAAGTTAGGTGGACAGCATCTCCCAAGCCTTCAGGATTTCCGCAGGAGCCTACTAGGCCCTCCTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS TCA 72 bp CACCACATGCAGTGCAAGGAGTCACTCCAGGCTCATTaGCAAGAGGAGGGCCTAGTAGGCTCCTGCGGAAAT +
Preference number: 6 (lower is better)
Translates to: HHMQCKESLQAH*QEEGLVGSCGN
Trigger: ATTTCCGCAGGAGCCTACTAGGCCCTCCTCTTGTCAATGAGCCTGGAGTGACTCCTTGCACTGCATGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS GCA 72 bp CACGCGGGTGCTCCTTGTCCCAGCCGCAGCTCTCTGTaGTCCGCCTCTGAAACTTTTACACTATACAGAAAC +
Preference number: 6 (lower is better)
Translates to: HAGAPCPSRSSL*SASETFTLYRN
Trigger: GTTTCTGTATAGTGTAAAAGTTTCAGAGGCGGAGCACAGAGAGCTGCGGCTGGGACAAGGAGCACCCGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000587905.6
ENST00000590371.5
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS GCA 72 bp CAATTATCAACTGCCATCAACAGAAACCAGGAGCTCTaGGGCAGGAAGCCGGCCGTGTCACCGAGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: QLSTAINRNQEL*GRKPAVSPSRE
Trigger: TTCTCTGCTCGGTGACACGGCCGGCTTCCTGCCGCAGAGCTCCTGGTTTCTGTTGATGGCAGTTGATAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS GCA 72 bp GGCTCCGACCGCAGACTGTGGCTACCAATTATCAACTaGCATCAACAGAAACCAGGAGCTCTGCGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: GSDRRLWLPIIN*HQQKPGALRQE
Trigger: TTCCTGCCGCAGAGCTCCTGGTTTCTGTTGATGGCAGTTGATAATTGGTAGCCACAGTCTGCGGTCGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS GCA 72 bp CCACCACTGCAGAGCAGCTCCTGCCGCGACAAGCTCTaGTTCCCAGACATCATCACAAAGAACAGTCACAAG +
Preference number: 6 (lower is better)
Translates to: PPLQSSSCRDKL*FPDIITKNSHK
Trigger: CTTGTGACTGTTCTTTGTGATGATGTCTGGGAAGCAGAGCTTGTCGCGGCAGGAGCTGCTCTGCAGTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590115.1
CDS GCA 72 bp CAAGCATTTAGTCAGTCACTGAACATCCACAAGGCGTaGGGTCTGGGTGTTCCCCGTGAGCTCTTTCCACCC +
Preference number: 6 (lower is better)
Translates to: QAFSQSLNIHKA*GLGVPRELFPP
Trigger: GGGTGGAAAGAGCTCACGGGGAACACCCAGACCGCACGCCTTGTGGATGTTCAGTGACTGACTAAATGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 72 bp GTCTCACACTGGAAGACATCCGCATGGTCCCTGGTCTaGACCGGTGCCTTCAGATCCCTTAAGGACCAAGAA +
Preference number: 6 (lower is better)
Translates to: VSHWKTSAWSLV*TGAFRSLKDQE
Trigger: TTCTTGGTCCTTAAGGGATCTGAAGGCACCGGTGCAGACCAGGGACCATGCGGATGTCTTCCAGTGTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp CCTTTCCTAAGATACTCGGGGACATCCTGGAATCAGTaGCAAACGTATACGGCGGTCCAGCTGCTCGGAGAC +
Preference number: 6 (lower is better)
Translates to: PFLRYSGTSWNQ*QTYTAVQLLGD
Trigger: GTCTCCGAGCAGCTGGACCGCCGTATACGTTTGCCACTGATTCCAGGATGTCCCCGAGTATCTTAGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS CCA 72 bp CAACACGGCCCTTTCCTAAGATACTCGGGGACATCCTaGAATCAGTGGCAAACGTATACGGCGGTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: QHGPFLRYSGTS*NQWQTYTAVQL
Trigger: CAGCTGGACCGCCGTATACGTTTGCCACTGATTCCAGGATGTCCCCGAGTATCTTAGGAAAGGGCCGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS CCA 72 bp CTTAGGGCGTCTTTCCAAAAATCTCTGTCGTTAAGCTaGACACACACACACAGGTGCCGGCCCATGGCCCGA +
Preference number: 6 (lower is better)
Translates to: LRASFQKSLSLS*THTHRCRPMAR
Trigger: TCGGGCCATGGGCCGGCACCTGTGTGTGTGTGTCCAGCTTAACGACAGAGATTTTTGGAAAGACGCCCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000587344.2
ENST00000587600.1
ENST00000593236.1
ENST00000677387.1
ENST00000678223.1
CDS CCA 72 bp ACCATCACCGTGACCACCACGACGATGATGATGATTTaGGCGAACTCCAGCTCCGCTGAGCAGGCTGCTAAT +
Preference number: 6 (lower is better)
Translates to: TITVTTTTMMMI*ANSSSAEQAAN
Trigger: ATTAGCAGCCTGCTCAGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586207.5
CDS CCA 72 bp ATTTGGGTCCGAGAGCTTTCACGGCAGCAGGGCAGATaGAGTGCCCAAAACAGGAGCCTCCTAGTCTCTGAA +
Preference number: 6 (lower is better)
Translates to: IWVRELSRQQGR*SAQNRSLLVSE
Trigger: TTCAGAGACTAGGAGGCTCCTGTTTTGGGCACTCCATCTGCCCTGCTGCCGTGAAAGCTCTCGGACCCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 72 bp ACCATCACCGTGACCACCACGACGATGATGATGATTTaGGCGAACTCCAGCTCCGCTGCACTCTCAGCAAGA +
Preference number: 6 (lower is better)
Translates to: TITVTTTTMMMI*ANSSSAALSAR
Trigger: TCTTGCTGAGAGTGCAGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678459.1
CDS CCA 72 bp GATGATGATGATTTGGGCGAACTCCAGCTCCGCACGTaGCAGGAATGGTGTGGGACAGAGAAGCACGTTCAG +
Preference number: 6 (lower is better)
Translates to: DDDDLGELQLRT*QEWCGTEKHVQ
Trigger: CTGAACGTGCTTCTCTGTCCCACACCATTCCTGCCACGTGCGGAGCTGGAGTTCGCCCAAATCATCATCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678309.1
CDS CCA 72 bp TTTCATTGTTCCAGTGTGTCTCCCCACAGGGACCACTaGTCTCACACTGGAAGACATCCGCATGGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: FHCSSVSPHRDH*SHTGRHPHGPW
Trigger: CCAGGGACCATGCGGATGTCTTCCAGTGTGAGACCAGTGGTCCCTGTGGGGAGACACACTGGAACAATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp CTGGCCATGAGGTGGAGCACAGAGAAGTTCTCGGCCTaGGTAGCCACAGAAAGAAATGACGCCGATGCCACA +
Preference number: 6 (lower is better)
Translates to: LAMRWSTEKFSA*VATERNDADAT
Trigger: TGTGGCATCGGCGTCATTTCTTTCTGTGGCTACCAAGGCCGAGAACTTCTCTGTGCTCCACCTCATGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CAA 72 bp GAGGGCCTAGTAGGCTCCTGCGGAAATCCTGAAGGCTaGGGAGATGCTGTCCACCTAACTTGCGATGGGAAA +
Preference number: 6 (lower is better)
Translates to: EGLVGSCGNPEG*GDAVHLTCDGK
Trigger: TTTCCCATCGCAAGTTAGGTGGACAGCATCTCCCAAGCCTTCAGGATTTCCGCAGGAGCCTACTAGGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS CAA 72 bp CAGGCCCAGCTCAGGACCCTGCCTAAGAGCAGGCACTaGATAAACGCACTGGGAGTCTTCATGAGCAGAAAC +
Preference number: 6 (lower is better)
Translates to: QAQLRTLPKSRH*INALGVFMSRN
Trigger: GTTTCTGCTCATGAAGACTCCCAGTGCGTTTATCAAGTGCCTGCTCTTAGGCAGGGTCCTGAGCTGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS CAA 90 bp CGTCTTTCTGAAGGTGTCAGCATCTCCATCAGGGCAGAGAAGCCTTaGTTCTTCTTTGAGCAGCCCTTCCTGGTCTGGCCACATGGCCCT +
Preference number: 6 (lower is better)
Translates to: RLSEGVSISIRAEKP*FFFEQPFLVWPHGP
Trigger: AGGGCCATGTGGCCAGACCAGGAAGGGCTGCTCAAAGAAGAACAAAGGCTTCTCTGCCCTGATGGAGATGCTGACACCTTCAGAAAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CAA 90 bp GGTCACCCCGGCAGATGCCAAGACCTTCCCAGACACAACACAGATTaGAAACAGGATTTCAGCCCCCTGAAGCACGCCCATCAACTTCCA +
Preference number: 6 (lower is better)
Translates to: GHPGRCQDLPRHNTD*KQDFSPLKHAHQLP
Trigger: TGGAAGTTGATGGGCGTGCTTCAGGGGGCTGAAATCCTGTTTCAAATCTGTGTTGTGTCTGGGAAGGTCTTGGCATCTGCCGGGGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS CAA 90 bp GACAGCTGGGCTGCAGGTATGAAGATGGTTCAAGAGAGCTTAGCTTaGCACGTGCTCCCCCAACCCTTCGTCTACACAGCTGCAGAGTTC +
Preference number: 6 (lower is better)
Translates to: DSWAAGMKMVQESLA*HVLPQPFVYTAAEF
Trigger: GAACTCTGCAGCTGTGTAGACGAAGGGTTGGGGGAGCACGTGCAAAGCTAAGCTCTCTTGAACCATCTTCATACCTGCAGCCCAGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CAA 90 bp TCAGAGCCTCAGGCCCAGCTCAGGACCCTGCCTAAGAGCAGGCACTaGATAAACGCACTGGGAGTCTTCATGAGCAGAAACTCACTTCTG +
Preference number: 6 (lower is better)
Translates to: SEPQAQLRTLPKSRH*INALGVFMSRNSLL
Trigger: CAGAAGTGAGTTTCTGCTCATGAAGACTCCCAGTGCGTTTATCAAGTGCCTGCTCTTAGGCAGGGTCCTGAGCTGGGCCTGAGGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS CAA 90 bp TTCCCCGTGAGCTCTTTCCACCCCAGCTTCCCGAGAGCCAATCGATaGGGCATGAAATTCACTCAGGAGAGAGGAGAGAAACACACGAGC +
Preference number: 6 (lower is better)
Translates to: FPVSSFHPSFPRANR*GMKFTQERGEKHTS
Trigger: GCTCGTGTGTTTCTCTCCTCTCTCCTGAGTGAATTTCATGCCCAATCGATTGGCTCTCGGGAAGCTGGGGTGGAAAGAGCTCACGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp GGGCTGGGTGCTTGTCGCTTCCTGTTTATTCCAAGGTaGGGGGCAGAGAGAAATTCAACACACGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: GLGACRFLFIPR*GAERNSTHACF
Trigger: GAAGCAGGCGTGTGTTGAATTTCTCTCTGCCCCTCACCTTGGAATAAACAGGAAGCGACAAGCACCCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399848.7
ENST00000590115.1
ENST00000677055.1
CDS TCA 72 bp AATGGCTTAGCAAAGACCCCAGGGAGGGGACAATCATaGGTCCTAGGCAGGAAAGGTCCTCTGGAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: NGLAKTPGRGQS*VLGRKGPLERG
Trigger: TCCTCTCTCCAGAGGACCTTTCCTGCCTAGGACTCATGATTGTCCCCTCCCTGGGGTCTTTGCTAAGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586207.5
CDS TCA 72 bp GAGGATGGTCACTACTGTCATGCCGTACCATGGAACTaGTGCCCTATACATGTCCCTGGCCTGCAGACATGG +
Preference number: 6 (lower is better)
Translates to: EDGHYCHAVPWN*CPIHVPGLQTW
Trigger: CCATGTCTGCAGGCCAGGGACATGTATAGGGCATCAGTTCCATGGTACGGCATGACAGTAGTGACCATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp AGCCACAATATCATACTACCACCCACCCAGCAGAAATaGGAAGACAGCAAGCGTTGGGGTGCGTGTGGGACC +
Preference number: 6 (lower is better)
Translates to: SHNIILPPTQQK*EDSKRWGACGT
Trigger: GGTCCCACACGCACCCCAACGCTTGCTGTCTTCTCATTTCTGCTGGGTGGGTGGTAGTATGATATTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp GCAGCACTCCCCCACACGCTCCAGCAGGATGCCGTGTaGAATTCCTTAGCAAACTTCCGTAGTCCTGAAAGA +
Preference number: 6 (lower is better)
Translates to: AALPHTLQQDAV*NSLANFRSPER
Trigger: TCTTTCAGGACTACGGAAGTTTGCTAAGGAATTTCACACGGCATCCTGCTGGAGCGTGTGGGGGAGTGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp CCCACGTGTTATGGGAGGGACCCAGGGGAAGGTAGTTaGATCATGGGGGCCAGTCTTTCCCATACTATTCTC +
Preference number: 6 (lower is better)
Translates to: PTCYGRDPGEGS*IMGASLSHTIL
Trigger: GAGAATAGTATGGGAAAGACTGGCCCCCATGATTCAACTACCTTCCCCTGGGTCCCTCCCATAACACGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 72 bp GACGGTGTCGTGATAGAGCTCATCCACTGGGTGACGTaGCTGTCTACAAGTCTCAGAAGAGCATCAACTCCC +
Preference number: 6 (lower is better)
Translates to: DGVVIELIHWVT*LSTSLRRASTP
Trigger: GGGAGTTGATGCTCTTCTGAGACTTGTAGACAGGCACGTCACCCAGTGGATGAGCTCTATCACGACACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp AGTGAGGCTGGGCCTTTTGTGGGTCACCCCGGCAGATaGCAAGACCTTCCCAGACACAACACAGATTTGAAA +
Preference number: 6 (lower is better)
Translates to: SEAGPFVGHPGR*QDLPRHNTDLK
Trigger: TTTCAAATCTGTGTTGTGTCTGGGAAGGTCTTGGCATCTGCCGGGGTGACCCACAAAAGGCCCAGCCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS CCA 72 bp CAAGTCTCACACAATACTCCTTCCCTTGATCTCTGCTaGAAGCTTTCAGTGTGGAAGGACCGGAGAGGGCGC +
Preference number: 6 (lower is better)
Translates to: QVSHNTPSLDLC*KLSVWKDRRGR
Trigger: GCGCCCTCTCCGGTCCTTCCACACTGAAAGCTTCCAGCAGAGATCAAGGGAAGGAGTATTGTGTGAGACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS CCA 72 bp AGATCTAAAGGGGACAGGGGGTGCAGAAGCTTTAGCTaGACTCTCCCTGCCATGCCAATGAGCCAAGGATGT +
Preference number: 6 (lower is better)
Translates to: RSKGDRGCRSFS*TLPAMPMSQGC
Trigger: ACATCCTTGGCTCATTGGCATGGCAGGGAGAGTCCAGCTAAAGCTTCTGCACCCCCTGTCCCCTTTAGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 72 bp ATGAGTCCTGGCTGCATTCAGAGCTGCACGGACCCCTaGCCTAGAGGTAAACTTGGGCAAAGCAGGTTTTAC +
Preference number: 6 (lower is better)
Translates to: MSPGCIQSCTDP*PRGKLGQSRFY
Trigger: GTAAAACCTGCTTTGCCCAAGTTTACCTCTAGGCCAGGGGTCCGTGCAGCTCTGAATGCAGCCAGGACTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CAA 72 bp CAACGTCTATCAGTGAGCAGTCTGCACTTCTCAGGTTaGGCCTCACACCTGGACGTGTCACACACACAGGCA +
Preference number: 6 (lower is better)
Translates to: QRLSVSSLHFSG*ASHLDVSHTQA
Trigger: TGCCTGTGTGTGTGACACGTCCAGGTGTGAGGCCAAACCTGAGAAGTGCAGACTGCTCACTGATAGACGTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS CAA 72 bp GAAGGTGTCAGCATCTCCATCAGGGCAGAGAAGCCTTaGTTCTTCTTTGAGCAGCCCTTCCTGGTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: EGVSISIRAEKP*FFFEQPFLVWP
Trigger: TGGCCAGACCAGGAAGGGCTGCTCAAAGAAGAACAAAGGCTTCTCTGCCCTGATGGAGATGCTGACACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CAA 72 bp TTCAGAGCTGCACGGACCCCTGGCCTAGAGGTAAACTaGGGCAAAGCAGGTTTTACAGTGAGCACAGAGGCT +
Preference number: 6 (lower is better)
Translates to: FRAARTPGLEVN*GKAGFTVSTEA
Trigger: AGCCTCTGTGCTCACTGTAAAACCTGCTTTGCCCAAGTTTACCTCTAGGCCAGGGGTCCGTGCAGCTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CAA 72 bp GTCTGTGCTGACAGCCAGCCAGATCTCAGTCTGAGGTaGCATTGTCTTATGCGGAGGTCAGGGAATGGTGCA +
Preference number: 6 (lower is better)
Translates to: VCADSQPDLSLR*HCLMRRSGNGA
Trigger: TGCACCATTCCCTGACCTCCGCATAAGACAATGCAACCTCAGACTGAGATCTGGCTGGCTGTCAGCACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 90 bp GTAAGAACCCTGGCCATGAGGTGGAGCACAGAGAAGTTCTCGGCCTaGGTAGCCACAGAAAGAAATGACGCCGATGCCACAAACACGTCT +
Preference number: 6 (lower is better)
Translates to: VRTLAMRWSTEKFSA*VATERNDADATNTS
Trigger: AGACGTGTTTGTGGCATCGGCGTCATTTCTTTCTGTGGCTACCAAGGCCGAGAACTTCTCTGTGCTCCACCTCATGGCCAGGGTTCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CAA 90 bp CTGTGGGTTCCAGAGGTGATCAGCCACAGATGGAAAAGGGAGGTCTaGGGATGCTTTCATCGTCCCAGCTACCCTGCAGGTGGACATTTA +
Preference number: 6 (lower is better)
Translates to: LWVPEVISHRWKREV*GCFHRPSYPAGGHL
Trigger: TAAATGTCCACCTGCAGGGTAGCTGGGACGATGAAAGCATCCCAAGACCTCCCTTTTCCATCTGTGGCTGATCACCTCTGGAACCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp ACCCAGGGCACTACTGTTTACAGCAACGTCTATCAGTaGGCAGTCTGCACTTCTCAGGTTTGGCCTCACACC +
Preference number: 6 (lower is better)
Translates to: TQGTTVYSNVYQ*AVCTSQVWPHT
Trigger: GGTGTGAGGCCAAACCTGAGAAGTGCAGACTGCTCACTGATAGACGTTGCTGTAAACAGTAGTGCCCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS TCA 72 bp GCATTTCAGAAACGCACCTGGAAGGGTGCAGAAGTGTaGGATAGCTTGTATGCCGCCACCTCATCTCAGGAC +
Preference number: 6 (lower is better)
Translates to: AFQKRTWKGAEV*DSLYAATSSQD
Trigger: GTCCTGAGATGAGGTGGCGGCATACAAGCTATCTCACACTTCTGCACCCTTCCAGGTGCGTTTCTGAAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp CTTAGAGACCTTCACCCTGTGAAAGCATTTGTGGCCTaGAAACCAGCTTCCGGCATACTGCTCCCCGGACAA +
Preference number: 6 (lower is better)
Translates to: LRDLHPVKAFVA*KPASGILLPGQ
Trigger: TTGTCCGGGGAGCAGTATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTTCACAGGGTGAAGGTCTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677867.1
CDS TCA 72 bp CATCCCAACAGCCTGACCTGCTCCCTCCACAAAATCTaGAAAGCTGCAAACTTCTGGGACTCACGGAACCAG +
Preference number: 6 (lower is better)
Translates to: HPNSLTCSLHKI*KAANFWDSRNQ
Trigger: CTGGTTCCGTGAGTCCCAGAAGTTTGCAGCTTTTCAGATTTTGTGGAGGGAGCAGGTCAGGCTGTTGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 72 bp CTGCAAGTCTCACACAATACTCCTTCCCTTGATCTCTaGTGGAAGCTTTCAGTGTGGAAGGACCGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: LQVSHNTPSLDL*WKLSVWKDRRG
Trigger: CCCTCTCCGGTCCTTCCACACTGAAAGCTTCCAGCAGAGATCAAGGGAAGGAGTATTGTGTGAGACTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS GCA 72 bp CACATGGTCATCATTCTACACACACACGCACACACATaGACACACGCACACACACGCACACACACACGCACA +
Preference number: 6 (lower is better)
Translates to: HMVIILHTHAHT*THAHTRTHTRT
Trigger: TGTGCGTGTGTGTGTGCGTGTGTGTGCGTGTGTGCATGTGTGTGCGTGTGTGTGTAGAATGATGACCATGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586222.2
CDS GCA 72 bp CAGGAAAGCAGCCAGCAAAATCCAGAGTACGGAAACTaGAGAACAAGCAAGCCAGACCCCTCCACCCAAAGT +
Preference number: 6 (lower is better)
Translates to: QESSQQNPEYGN*RTSKPDPSTQS
Trigger: ACTTTGGGTGGAGGGGTCTGGCTTGCTTGTTCTGCAGTTTCCGTACTCTGGATTTTGCTGGCTGCTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678309.1
CDS GCA 72 bp GACAGCACCAACGTGCAAAGCTTTGGCCTGACGTGGTaGAGACCCAAACACTGTCACCTGATGGGAAAAGTA +
Preference number: 6 (lower is better)
Translates to: DSTNVQSFGLTW*RPKHCHLMGKV
Trigger: TACTTTTCCCATCAGGTGACAGTGTTTGGGTCTGCACCACGTCAGGCCAAAGCTTTGCACGTTGGTGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS GCA 72 bp ATTAACGATTTCTTTGCCCACACCCCAGTGCCTTTGTaGTTAATCACGTCAGCAGCACTCCCCCACACGCTC +
Preference number: 6 (lower is better)
Translates to: INDFFAHTPVPL*LITSAALPHTL
Trigger: GAGCGTGTGGGGGAGTGCTGCTGACGTGATTAAGCACAAAGGCACTGGGGTGTGGGCAAAGAAATCGTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp ACCATCACCGTGACCACCACGACGATGATGATGATTTaGGCGAACTCCAGCTCCGCTGTGAAAGCATTTGTG +
Preference number: 6 (lower is better)
Translates to: TITVTTTTMMMI*ANSSSAVKAFV
Trigger: CACAAATGCTTTCACAGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677055.1
ENST00000679167.1
ENST00000679177.1
CDS CCA 72 bp TCAGACAGCACCAACGTGCAAAGCTTTGGCCTGACGTaGTGCAGACCCAAACACTGTCACCTGATGGGAAAA +
Preference number: 6 (lower is better)
Translates to: SDSTNVQSFGLT*CRPKHCHLMGK
Trigger: TTTTCCCATCAGGTGACAGTGTTTGGGTCTGCACCACGTCAGGCCAAAGCTTTGCACGTTGGTGCTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS CAA 72 bp GGCAGATGCCAAGACCTTCCCAGACACAACACAGATTaGAAACAGGATTTCAGCCCCCTGAAGCACGCCCAT +
Preference number: 6 (lower is better)
Translates to: GRCQDLPRHNTD*KQDFSPLKHAH
Trigger: ATGGGCGTGCTTCAGGGGGCTGAAATCCTGTTTCAAATCTGTGTTGTGTCTGGGAAGGTCTTGGCATCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS CAA 72 bp GCTGCAGGTATGAAGATGGTTCAAGAGAGCTTAGCTTaGCACGTGCTCCCCCAACCCTTCGTCTACACAGCT +
Preference number: 6 (lower is better)
Translates to: AAGMKMVQESLA*HVLPQPFVYTA
Trigger: AGCTGTGTAGACGAAGGGTTGGGGGAGCACGTGCAAAGCTAAGCTCTCTTGAACCATCTTCATACCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CAA 72 bp CACCATCACCGTGACCACCACGACGATGATGATGATTaGGGCGAACTCCAGCTCCGCTGTGAAAGCATTTGT +
Preference number: 6 (lower is better)
Translates to: HHHRDHHDDDDD*GELQLRCESIC
Trigger: ACAAATGCTTTCACAGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000677055.1
ENST00000679167.1
ENST00000679177.1
CDS CAA 90 bp TGTCCACAGAAGAGTGCTAGAAAGCAGGGCACGCAAGGAAAGAAGTaGAGGCCAAAGTCAAACGTTCACATCCCCCTTCTACGGCGCTGT +
Preference number: 6 (lower is better)
Translates to: CPQKSARKQGTQGKK*RPKSNVHIPLLRRC
Trigger: ACAGCGCCGTAGAAGGGGGATGTGAACGTTTGACTTTGGCCTCAACTTCTTTCCTTGCGTGCCCTGCTTTCTAGCACTCTTCTGTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592812.1
ENST00000678556.1
CDS CAA 90 bp CACCATCCTGTTAGGAGAGTGTCCTCCCAGCTGGTGCTTCAGATTTaGTCCATTCCATACAACCTGTCACTGGCATCCCCATCCCAACTG +
Preference number: 6 (lower is better)
Translates to: HHPVRRVSSQLVLQI*SIPYNLSLASPSQL
Trigger: CAGTTGGGATGGGGATGCCAGTGACAGGTTGTATGGAATGGACAAAATCTGAAGCACCAGCTGGGAGGACACTCTCCTAACAGGATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679091.1
ENST00000679303.1
CDS CAA 90 bp GAGCGTGGCCTGTTTCTAGCTAGACTTGCCCGAATCGGTCTTGTCTaGGTGTCTTGGGTCTTGGTGGCATGGATCTTAGAGAATGACAAG +
Preference number: 6 (lower is better)
Translates to: ERGLFLARLARIGLV*VSWVLVAWILENDK
Trigger: CTTGTCATTCTCTAAGATCCATGCCACCAAGACCCAAGACACCAAGACAAGACCGATTCGGGCAAGTCTAGCTAGAAACAGGCCACGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS TCA 72 bp CAGGTGAATTTGCACTCTGTGAAAGCATTTGTGGCCTaGAAACCAGCTTCCGGCATACTGCTCCCCGGACAA +
Preference number: 6 (lower is better)
Translates to: QVNLHSVKAFVA*KPASGILLPGQ
Trigger: TTGTCCGGGGAGCAGTATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTTCACAGAGTGCAAATTCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000586222.2
ENST00000587905.6
ENST00000676672.1
ENST00000676891.1
ENST00000677304.1
ENST00000678459.1
ENST00000679091.1
CDS TCA 72 bp GAAAGAAATGACGCCGATGCCACAAACACGTCTTTCTaGAGGTGTCAGCATCTCCATCAGGGCAGAGAAGCC +
Preference number: 6 (lower is better)
Translates to: ERNDADATNTSF*RCQHLHQGREA
Trigger: GGCTTCTCTGCCCTGATGGAGATGCTGACACCTTCAGAAAGACGTGTTTGTGGCATCGGCGTCATTTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp GCAGAAGCTTTAGCTGGACTCTCCCTGCCATGCCAATaGGCCAAGGATGTGCAAAAATGCACATCCTGCCAT +
Preference number: 6 (lower is better)
Translates to: AEALAGLSLPCQ*AKDVQKCTSCH
Trigger: ATGGCAGGATGTGCATTTTTGCACATCCTTGGCTCATTGGCATGGCAGGGAGAGTCCAGCTAAAGCTTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp AAACGAATGACGTTTATGGGAATGCCCACGTTTTCCTaGAGATCCCGACTGGTAGTTCTCCAGGTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: KRMTFMGMPTFS*RSRLVVLQVSR
Trigger: CCTGGACACCTGGAGAACTACCAGTCGGGATCTGCAGGAAAACGTGGGCATTCCCATAAACGTCATTCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS GCA 72 bp CTTCTCTATAACTTACGAGGACAGGACAGGGCTGCCTaGTTTCTCAGGTCCCTGCCAGCTCTAGAACTTAGA +
Preference number: 6 (lower is better)
Translates to: LLYNLRGQDRAA*FLRSLPALELR
Trigger: TCTAAGTTCTAGAGCTGGCAGGGACCTGAGAAAGCAGGCAGCCCTGTCCTGTCCTCGTAAGTTATAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676773.1
CDS GCA 72 bp CCCACCATCCTGTTAGGAGAGTGTCCTCCCAGCTGGTaGTTCAGATTTTGTCCATTCCATACAACCTGTCAC +
Preference number: 6 (lower is better)
Translates to: PTILLGECPPSW*FRFCPFHTTCH
Trigger: GTGACAGGTTGTATGGAATGGACAAAATCTGAAGCACCAGCTGGGAGGACACTCTCCTAACAGGATGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679091.1
ENST00000679303.1
CDS GCA 72 bp CACAGAATGGTAGATCCACAGACAGCCTGTACCGTGTaGCTGGAAAAGACACAGACACTCAATGCCAGCATG +
Preference number: 6 (lower is better)
Translates to: HRMVDPQTACTV*LEKTQTLNASM
Trigger: CATGCTGGCATTGAGTGTCTGTGTCTTTTCCAGGCACACGGTACAGGCTGTCTGTGGATCTACCATTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp GTGGTGTTCCCACCACGGGACTTTCTTCCTGCGGGCTaGCATTCTCTAATCCAAACTATGAACAAGGGCATT +
Preference number: 6 (lower is better)
Translates to: VVFPPRDFLPAG*HSLIQTMNKGI
Trigger: AATGCCCTTGTTCATAGTTTGGATTAGAGAATGCCAGCCCGCAGGAAGAAAGTCCCGTGGTGGGAACACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp AGCTCTTTCCACCCCAGCTTCCCGAGAGCCAATCGATaGGGCATGAAATTCACTCAGGAGAGAGGAGAGAAA +
Preference number: 6 (lower is better)
Translates to: SSFHPSFPRANR*GMKFTQERGEK
Trigger: TTTCTCTCCTCTCTCCTGAGTGAATTTCATGCCCAATCGATTGGCTCTCGGGAAGCTGGGGTGGAAAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 90 bp GAGCGTGGCCTGTTTCTAGCTAGACTTGCCCGAATCGGTCTTGTCTaGGTGTCTTGGGTCTTGGTGGCATGGATTCAGTTTCAAGTATGT +
Preference number: 6 (lower is better)
Translates to: ERGLFLARLARIGLV*VSWVLVAWIQFQVC
Trigger: ACATACTTGAAACTGAATCCATGCCACCAAGACCCAAGACACCAAGACAAGACCGATTCGGGCAAGTCTAGCTAGAAACAGGCCACGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677387.1
CDS CAA 90 bp AGAGGTGTGAAAGTTCTTACGACGCCTCGCAATCTAAGTCTGTGCTaGAAAATTGCCCATGACGATGAAGCGCCACGCAGTTCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: RGVKVLTTPRNLSLC*KIAHDDEAPRSSAE
Trigger: CTCTGCAGAACTGCGTGGCGCTTCATCGTCATGGGCAATTTTCAAGCACAGACTTAGATTGCGAGGCGTCGTAAGAACTTTCACACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp AGAGAAGTTCTCGGCCTTGGTAGCCACAGAAAGAAATaGCGCCGATGCCACAAACACGTCTTTCTGAAGGTG +
Preference number: 6 (lower is better)
Translates to: REVLGLGSHRKK*RRCHKHVFLKV
Trigger: CACCTTCAGAAAGACGTGTTTGTGGCATCGGCGTCATTTCTTTCTGTGGCTACCAAGGCCGAGAACTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp GCGAACCAAGATACAAGCATTTACCACTGGTGCAGGTaGATTTGCACTCAGGAGAAGGAAGCAGCGCATCCA +
Preference number: 6 (lower is better)
Translates to: ANQDTSIYHWCR*ICTQEKEAAHP
Trigger: TGGATGCGCTGCTTCCTTCTCCTGAGTGCAAATTCACCTGCACCAGTGGTAAATGCTTGTATCTTGGTTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677867.1
CDS TCA 72 bp GGATTCCCCACGTCGGAGACATCACTCCTATCGAAATaGCTCATCTCCTCACTAAAAATGGCTTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: GFPTSETSLLSK*LISSLKMASWR
Trigger: CCTCCAGGAAGCCATTTTTAGTGAGGAGATGAGTCATTTCGATAGGAGTGATGTCTCCGACGTGGGGAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS TCA 72 bp GGATATTGTGTGTATCCTGTGAAAGCATTTGTGGCCTaGAAACCAGCTTCCGGCATACTGCTCCCCGGACAA +
Preference number: 6 (lower is better)
Translates to: GYCVYPVKAFVA*KPASGILLPGQ
Trigger: TTGTCCGGGGAGCAGTATGCCGGAAGCTGGTTTTCAGGCCACAAATGCTTTCACAGGATACACACAATATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 72 bp GTGAAAGTTCTTACGACGCCTCGCAATCTAAGTCTGTaGTTGAAAATTGCCCATGACGATGAAGCGCCACGC +
Preference number: 6 (lower is better)
Translates to: VKVLTTPRNLSL*LKIAHDDEAPR
Trigger: GCGTGGCGCTTCATCGTCATGGGCAATTTTCAAGCACAGACTTAGATTGCGAGGCGTCGTAAGAACTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp GCTAGACTCAAATGCTGTGGCTCCGACCGCAGACTGTaGCTACCAATTATCAACTGCCATCAACAGAAACCA +
Preference number: 6 (lower is better)
Translates to: ARLKCCGSDRRL*LPIINCHQQKP
Trigger: TGGTTTCTGTTGATGGCAGTTGATAATTGGTAGCCACAGTCTGCGGTCGGAGCCACAGCATTTGAGTCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587757.5
ENST00000590308.1
CDS CCA 72 bp ATCCTTGAAATCCTTCTCACAACAGTGTCAAGAGCCTaGATGCTGGCTAGGGTCAGGGTCCCACTAGTGTTT +
Preference number: 6 (lower is better)
Translates to: ILEILLTTVSRA*MLARVRVPLVF
Trigger: AAACACTAGTGGGACCCTGACCCTAGCCAGCATCCAGGCTCTTGACACTGTTGTGAGAAGGATTTCAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 72 bp GCTAGACTTGCCCGAATCGGTCTTGTCTTGGTGTCTTaGGTCTTGGTGGCATGGATCTTAGAGAATGACAAG +
Preference number: 6 (lower is better)
Translates to: ARLARIGLVLVS*VLVAWILENDK
Trigger: CTTGTCATTCTCTAAGATCCATGCCACCAAGACCCAAGACACCAAGACAAGACCGATTCGGGCAAGTCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS CCA 72 bp TCTGAGGTTGCATTGTCTTATGCGGAGGTCAGGGAATaGTGCAGGGAGCCTGAATTAACGATTTCTTTGCCC +
Preference number: 6 (lower is better)
Translates to: SEVALSYAEVRE*CREPELTISLP
Trigger: GGGCAAAGAAATCGTTAATTCAGGCTCCCTGCACCATTCCCTGACCTCCGCATAAGACAATGCAACCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp GCACTCTTTCCTCAAGCGCACTTCTTACAAGCAGCTTaGCTTTGTAAACAGAGAGGAGGTGTACGCACTGGC +
Preference number: 6 (lower is better)
Translates to: ALFPQAHFLQAA*LCKQRGGVRTG
Trigger: GCCAGTGCGTACACCTCCTCTCTGTTTACAAAGCAAAGCTGCTTGTAAGAAGTGCGCTTGAGGAAAGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CAA 72 bp TGCCACATCCCTGAAGTCAGTGTAGATCTCACAGCATaGATGCATTTCAGAAACGCACCTGGAAGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: CHIPEVSVDLTA*MHFRNAPGRVQ
Trigger: CTGCACCCTTCCAGGTGCGTTTCTGAAATGCATCAATGCTGTGAGATCTACACTGACTTCAGGGATGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CAA 72 bp CTGTTTCTAGCTAGACTTGCCCGAATCGGTCTTGTCTaGGTGTCTTGGGTCTTGGTGGCATGGATCTTAGAG +
Preference number: 6 (lower is better)
Translates to: LFLARLARIGLV*VSWVLVAWILE
Trigger: CTCTAAGATCCATGCCACCAAGACCCAAGACACCAAGACAAGACCGATTCGGGCAAGTCTAGCTAGAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS CAA 72 bp CACCATCACCGTGACCACCACGACGATGATGATGATTaGGGCGAACTCCAGCTCCGCTTTTCTTTAAAATGC +
Preference number: 6 (lower is better)
Translates to: HHHRDHHDDDDD*GELQLRFSLKC
Trigger: GCATTTTAAAGAAAAGCGGAGCTGGAGTTCGCCCAAATCATCATCATCGTCGTGGTGGTCACGGTGATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677910.1
CDS CAA 72 bp TCCAGGCTGAGGTGGTCTCAGACAGAGATGAGGAACTaGTTGGGAACTGGAGCAAAACTGACTCTTGCTATG +
Preference number: 6 (lower is better)
Translates to: SRLRWSQTEMRN*LGTGAKLTLAM
Trigger: CATAGCAAGAGTCAGTTTTGCTCCAGTTCCCAACAAGTTCCTCATCTCTGTCTGAGACCACCTCAGCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 90 bp TGGGTTTATCAAGGGTTTCCGCTTTTGCTTCTTCCTCATTCTCTCTaGCTGCCGCCATGTAAGAAGTGCCTTTCGCCTCCCGTCATGATT +
Preference number: 6 (lower is better)
Translates to: WVYQGFPLLLLPHSL*LPPCKKCLSPPVMI
Trigger: AATCATGACGGGAGGCGAAAGGCACTTCTTACATGGCGGCAGCAAGAGAGAATGAGGAAGAAGCAAAAGCGGAAACCCTTGATAAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp AATACAACCCTGAAGTTGAAGAATCGGGGACAATGGTaGGATGGAGCTTCAGAATCCAGTCCCCTGATGCTG +
Preference number: 6 (lower is better)
Translates to: NTTLKLKNRGQW*DGASESSPLML
Trigger: CAGCATCAGGGGACTGGATTCTGAAGCTCCATCTCACCATTGTCCCCGATTCTTCAACTTCAGGGTTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp CAGGAAGCCACCTCTTACATCAGTGTGACGCGGATGTaGGACCTGGGATCAAAGGAGATCATTTTGAAGCTT +
Preference number: 6 (lower is better)
Translates to: QEATSYISVTRM*DLGSKEIILKL
Trigger: AAGCTTCAAAATGATCTCCTTTGATCCCAGGTCTCACATCCGCGTCACACTGATGTAAGAGGTGGCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 72 bp CACTCTTTCCTCAAGCGCACTTCTTACAAGCAGCTTTaGTTTGTAAACAGAGAGGAGGTGTACGCACTGGCA +
Preference number: 6 (lower is better)
Translates to: HSFLKRTSYKQL*FVNREEVYALA
Trigger: TGCCAGTGCGTACACCTCCTCTCTGTTTACAAAGCAAAGCTGCTTGTAAGAAGTGCGCTTGAGGAAAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp AGCCTCCTAGTCTCTGAAGAGCAAGCCTGGTTTTCATaGTACCTTCACGGTGGTTTAGGAAAAGCACACACT +
Preference number: 6 (lower is better)
Translates to: SLLVSEEQAWFS*YLHGGLGKAHT
Trigger: AGTGTGTGCTTTTCCTAAACCACCGTGAAGGTAGCATGAAAACCAGGCTTGCTCTTCAGAGACTAGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp CTGACAAGCCTGGCCCTCCTCCAGAATGGGCCATGCTaGATGCTTTTAATATTCCATTTACTCCTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: LTSLALLQNGPC*MLLIFHLLLSG
Trigger: TCCAGAAAGGAGTAAATGGAATATTAAAAGCATGCAGCATGGCCCATTCTGGAGGAGGGCCAGGCTTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp AGGATGAGGAAGGACAGGGTTTCTAGACAGCTGGGCTaGAGGTATGAAGATGGTTCAAGAGAGCTTAGCTTT +
Preference number: 6 (lower is better)
Translates to: RMRKDRVSRQLG*RYEDGSRELSF
Trigger: AAAGCTAAGCTCTCTTGAACCATCTTCATACCTGCAGCCCAGCTGTCTAGAAACCCTGTCCTTCCTCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 72 bp GATGGAAGCGCCTCTACTTTTCCTCGCACCAATTCATaGAAGCCTCCCGGTGGTGTTCTGCAAATTTCATTA +
Preference number: 6 (lower is better)
Translates to: DGSASTFPRTNS*KPPGGVLQISL
Trigger: TAATGAAATTTGCAGAACACCACCGGGAGGCTTGCATGAATTGGTGCGAGGAAAAGTAGAGGCGCTTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS CCA 72 bp GCTAGACTTGCCCGAATCGGTCTTGTCTTGGTGTCTTaGGTCTTGGTGGCATGGATTCAGTTTCAAGTATGT +
Preference number: 6 (lower is better)
Translates to: ARLARIGLVLVS*VLVAWIQFQVC
Trigger: ACATACTTGAAACTGAATCCATGCCACCAAGACCCAAGACACCAAGACAAGACCGATTCGGGCAAGTCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677387.1
CDS CCA 72 bp AATTTCATTATCAGACAGCACCAACGTGCAAAGCTTTaGCCTGACGTGGTGCAGACCCAAACACTGTCACCT +
Preference number: 6 (lower is better)
Translates to: NFIIRQHQRAKL*PDVVQTQTLSP
Trigger: AGGTGACAGTGTTTGGGTCTGCACCACGTCAGGCCAAAGCTTTGCACGTTGGTGCTGTCTGATAATGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS CAA 72 bp AAGAGTGCTAGAAAGCAGGGCACGCAAGGAAAGAAGTaGAGGCCAAAGTCAAACGTTCACATCCCCCTTCTA +
Preference number: 6 (lower is better)
Translates to: KSARKQGTQGKK*RPKSNVHIPLL
Trigger: TAGAAGGGGGATGTGAACGTTTGACTTTGGCCTCAACTTCTTTCCTTGCGTGCCCTGCTTTCTAGCACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592812.1
ENST00000678556.1
CDS CAA 72 bp CTGTTTCTAGCTAGACTTGCCCGAATCGGTCTTGTCTaGGTGTCTTGGGTCTTGGTGGCATGGATTCAGTTT +
Preference number: 6 (lower is better)
Translates to: LFLARLARIGLV*VSWVLVAWIQF
Trigger: AAACTGAATCCATGCCACCAAGACCCAAGACACCAAGACAAGACCGATTCGGGCAAGTCTAGCTAGAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677387.1
CDS CAA 72 bp AAAGTTCTTACGACGCCTCGCAATCTAAGTCTGTGCTaGAAAATTGCCCATGACGATGAAGCGCCACGCAGT +
Preference number: 6 (lower is better)
Translates to: KVLTTPRNLSLC*KIAHDDEAPRS
Trigger: ACTGCGTGGCGCTTCATCGTCATGGGCAATTTTCAAGCACAGACTTAGATTGCGAGGCGTCGTAAGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp ATGGTGTTGAGCCTGCGGGTACACAGAAGTCAAGAATaGAGGTTTGGGAACCTCCGCCTAGATTTCAGAAGA +
Preference number: 6 (lower is better)
Translates to: MVLSLRVHRSQE*RFGNLRLDFRR
Trigger: TCTTCTGAAATCTAGGCGGAGGTTCCCAAACCTCAATTCTTGACTTCTGTGTACCCGCAGGCTCAACACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp GGTTTGGCTGTGTTGCCACCCAAATCTCAACTTGAATaGTATCTCCCAGAATTCCCACATATCGTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: GLAVLPPKSQLE*YLPEFPHIVGG
Trigger: CCCTCCCACGATATGTGGGAATTCTGGGAGATACAATTCAAGTTGAGATTTGGGTGGCAACACAGCCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 90 bp AGCTTCCACATGGTGTTGAGCCTGCGGGTACACAGAAGTCAAGAATaGAGGTTTGGGAACCTCCGCCTAGATTTCAGAAGATGTATGGAA +
Preference number: 6 (lower is better)
Translates to: SFHMVLSLRVHRSQE*RFGNLRLDFRRCME
Trigger: TTCCATACATCTTCTGAAATCTAGGCGGAGGTTCCCAAACCTCAATTCTTGACTTCTGTGTACCCGCAGGCTCAACACCATGTGGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 90 bp TGCCATTCTCGTGATAGTGAATTAGTCTCACGAGATCTGATAGGTTaGTTTCTGCTTTTGCTTCTTCCTCATTCTCCCTTGCTGCCGCCC +
Preference number: 6 (lower is better)
Translates to: CHSRDSELVSRDLIG*FLLLLLPHSPLLPP
Trigger: GGGCGGCAGCAAGGGAGAATGAGGAAGAAGCAAAAGCAGAAACAAACCTATCAGATCTCGTGAGACTAATTCACTATCACGAGAATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp TGCTCCGCCTCTGAAACTTTTACACTATACAGAAACTaGTGGGAGTTCTCGGAAATGGCCCAACAGGAGGTT +
Preference number: 6 (lower is better)
Translates to: CSASETFTLYRN*WEFSEMAQQEV
Trigger: AACCTCCTGTTGGGCCATTTCCGAGAACTCCCATCAGTTTCTGTATAGTGTAAAAGTTTCAGAGGCGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000587905.6
ENST00000590371.5
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
CDS GCA 72 bp GAGTGTCTTCTCCAGTCCACCTATTCACAGGGCAGATaGAACTTCACATCTGGTGAGTTAGCATCCTTTTTC +
Preference number: 6 (lower is better)
Translates to: ECLLQSTYSQGR*NFTSGELASFF
Trigger: GAAAAAGGATGCTAACTCACCAGATGTGAAGTTGCATCTGCCCTGTGAATAGGTGGACTGGAGAAGACACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS GCA 72 bp ACCAAGCCAGCGAAGAGCAGGGATTTTCAAACACCGTaGTGTTCTGTCAGGTTAATAAAGGGATCGTGTGAA +
Preference number: 6 (lower is better)
Translates to: TKPAKSRDFQTP*CSVRLIKGSCE
Trigger: TTCACACGATCCCTTTATTAACCTGACAGAACAGCACGGTGTTTGAAAATCCCTGCTCTTCGCTGGCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp TCTGTCTACGAGGAGCCAGAGGCCCAGAGGATTAAGTaGCTTCCTGGAATGTTACATGAATCAGACAAAAGA +
Preference number: 6 (lower is better)
Translates to: SVYEEPEAQRIK*LPGMLHESDKR
Trigger: TCTTTTGTCTGATTCATGTAACATTCCAGGAAGCCACTTAATCCTCTGGGCCTCTGGCTCCTCGTAGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CAA 72 bp AACCCAGGCGTGGTTTGCTCTGCCATGCATACTGCTTaGCACCCAACTGTAAAAAGTCCATTTACATTCCAG +
Preference number: 6 (lower is better)
Translates to: NPGVVCSAMHTA*HPTVKSPFTFQ
Trigger: CTGGAATGTAAATGGACTTTTTACAGTTGGGTGCAAAGCAGTATGCATGGCAGAGCAAACCACGCCTGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp ATAGAGTTTGGCTGTGTTCCCACAAGTCAACTTGACTaGTATCTCCCAGAATTCCCACGTGTTATGGGAGGG +
Preference number: 6 (lower is better)
Translates to: IEFGCVPTSQLD*YLPEFPRVMGG
Trigger: CCCTCCCATAACACGTGGGAATTCTGGGAGATACAAGTCAAGTTGACTTGTGGGAACACAGCCAAACTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp TTAGTCTCACGAGATCTGATAGGTTTGTTTCTGCTTTaGCTTCTTCCTCATTCTCCCTTGCTGCCGCCCTGT +
Preference number: 6 (lower is better)
Translates to: LVSRDLIGLFLL*LLPHSPLLPPC
Trigger: ACAGGGCGGCAGCAAGGGAGAATGAGGAAGAAGCAAAAGCAGAAACAAACCTATCAGATCTCGTGAGACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 90 bp AAAAGATGGGACTATGGGCCATATTTACCACGTTTATCCAGAGAGTaGATTCTCCTTAATACCAGGAAACTAGGCAACAGCAGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: KRWDYGPYLPRLSRE*ILLNTRKLGNSREG
Trigger: CCCCTCCCTGCTGTTGCCTAGTTTCCTGGTATTAAGGAGAATCAACTCTCTGGATAAACGTGGTAAATATGGCCCATAGTCCCATCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587440.1
CDS CAA 90 bp CACAGCAGAAAGCCAGCATTAGGGTGGAAAATAACAGCCAACATGTaGTTGAGTGACGACTGTGCATGGAATGCTGAATTAGGCATCTTC +
Preference number: 6 (lower is better)
Translates to: HSRKPALGWKITANM*LSDDCAWNAELGIF
Trigger: GAAGATGCCTAATTCAGCATTCCATGCACAGTCGTCACTCAACAACATGTTGGCTGTTATTTTCCACCCTAATGCTGGCTTTCTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 90 bp GATAGTGAATTAGTCTCACGAGATCTGATAGGTTTGTTTCTGCTTTaGCTTCTTCCTCATTCTCCCTTGCTGCCGCCCTGTAAGAAGTGC +
Preference number: 6 (lower is better)
Translates to: DSELVSRDLIGLFLL*LLPHSPLLPPCKKC
Trigger: GCACTTCTTACAGGGCGGCAGCAAGGGAGAATGAGGAAGAAGCAAAAGCAGAAACAAACCTATCAGATCTCGTGAGACTAATTCACTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp TTGATATTTCCAGATGGTGGATGCACCCCACAACCATaGGCAATTATCAGTAACCCAGAGCTACTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: LIFPDGGCTPQP*AIISNPELLQQ
Trigger: CTGCTGAAGTAGCTCTGGGTTACTGATAATTGCTCATGGTTGTGGGGTGCATCCACCATCTGGAAATATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp GGCTGGTTACAAGAAATAGGGGGTTTGCCACATCCCTaGAGTCAGTGTAGATCTCACAGCATTGATGCATTT +
Preference number: 6 (lower is better)
Translates to: GWLQEIGGLPHP*SQCRSHSIDAF
Trigger: AAATGCATCAATGCTGTGAGATCTACACTGACTTCAGGGATGTGGCAAACCCCCTATTTCTTGTAACCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp GATGATAGAGTTTGGCTGTGTTCCCACAAGTCAACTTaGCTTGTATCTCCCAGAATTCCCACGTGTTATGGG +
Preference number: 6 (lower is better)
Translates to: DDRVWLCSHKST*LVSPRIPTCYG
Trigger: CCCATAACACGTGGGAATTCTGGGAGATACAAGTCAAGTTGACTTGTGGGAACACAGCCAAACTCTATCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp GACTTTGGACTGTGGACTTCTGGGTTAATGCTGAAATaGGTTAAGACTTTGGGGGACTATTGGGAAGGCAAG +
Preference number: 6 (lower is better)
Translates to: DFGLWTSGLMLK*VKTLGDYWEGK
Trigger: CTTGCCTTCCCAATAGTCCCCCAAAGTCTTAACTCATTTCAGCATTAACCCAGAAGTCCACAGTCCAAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp CTAATCCAAACTATGAACAAGGGCATTCGGCATCCCTaGTGCCCTTGCTGCATTTCTGATTTTCTCAATGCC +
Preference number: 6 (lower is better)
Translates to: LIQTMNKGIRHP*CPCCISDFLNA
Trigger: GGCATTGAGAAAATCAGAAATGCAGCAAGGGCATCAGGGATGCCGAATGCCCTTGTTCATAGTTTGGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp TTACACTATACAGAAACTGATGGGAGTTCTCGGAAATaGCCCAACAGGAGGTTTGATGTCACGAACGTAGAG +
Preference number: 6 (lower is better)
Translates to: LHYTETDGSSRK*PNRRFDVTNVE
Trigger: CTCTACGTTCGTGACATCAAACCTCCTGTTGGGCCATTTCCGAGAACTCCCATCAGTTTCTGTATAGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000359446.10
ENST00000399848.7
ENST00000587905.6
ENST00000590115.1
ENST00000590371.5
ENST00000676891.1
ENST00000677055.1
ENST00000677304.1
ENST00000678459.1
ENST00000679091.1
ENST00000679167.1
ENST00000679177.1
ENST00000679303.1
CDS CCA 72 bp TACTTTTCCTCGCACCAATTCATGCAAGCCTCCCGGTaGTGTTCTGCAAATTTCATTATCAGACAGCACCAA +
Preference number: 6 (lower is better)
Translates to: YFSSHQFMQASR*CSANFIIRQHQ
Trigger: TTGGTGCTGTCTGATAATGAAATTTGCAGAACACCACCGGGAGGCTTGCATGAATTGGTGCGAGGAAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS CAA 90 bp TTCCCTCTCACGCTCTGTCATTTCCTCCAGGAGATCTTTTCTAAGTaGAAGCCTTCTGTCCAAGACACTCCCATAATGATGAATCTAACC +
Preference number: 6 (lower is better)
Translates to: FPLTLCHFLQEIFSK*KPSVQDTPIMMNLT
Trigger: GGTTAGATTCATCATTATGGGAGTGTCTTGGACAGAAGGCTTCAACTTAGAAAAGATCTCCTGGAGGAAATGACAGAGCGTGAGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677744.1
ENST00000678223.1
CDS TCA 72 bp CACCTATTCACAGGGCAGATGCAACTTCACATCTGGTaGGTTAGCATCCTTTTTCAAAAACGTTTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: HLFTGQMQLHIW*VSILFQKRLAR
Trigger: TCTGGCCAAACGTTTTTGAAAAAGGATGCTAACTCACCAGATGTGAAGTTGCATCTGCCCTGTGAATAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592991.1
CDS TCA 72 bp GTAACGTCCTCATTATGTGGGTTCCGCAGCCCAACATaGTTAATGTTTGAAGAGCAGAGAACGGGGTTAAAA +
Preference number: 6 (lower is better)
Translates to: VTSSLCGFRSPT*LMFEEQRTGLK
Trigger: TTTTAACCCCGTTCTCTGCTCTTCAAACATTAATCATGTTGGGCTGCGGAACCCACATAATGAGGACGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp CCCTTCATTTCTCTCCACAGCTCCAGACACCCAACATaGCATTACAGTTTTCCTGTTTGTTTTCGATCTCTG +
Preference number: 6 (lower is better)
Translates to: PFISLHSSRHPT*HYSFPVCFRSL
Trigger: CAGAGATCGAAAACAAACAGGAAAACTGTAATGTCATGTTGGGTGTCTGGAGCTGTGGAGAGAAATGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS TCA 72 bp CTTCCAGTGACATTGGTCAGATTTCTGCAAAACGAATaGCGTTTATGGGAATGCCCACGTTTTCCTGCAGAT +
Preference number: 6 (lower is better)
Translates to: LPVTLVRFLQNE*RLWECPRFPAD
Trigger: ATCTGCAGGAAAACGTGGGCATTCCCATAAACGTCATTCGTTTTGCAGAAATCTGACCAATGTCACTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS TCA 72 bp TTGGGAGATGCTGTCCACCTAACTTGCGATGGGAAATaGAAATGCACAGAGGATATATCCCATATCCATCCT +
Preference number: 6 (lower is better)
Translates to: LGDAVHLTCDGK*KCTEDISHIHP
Trigger: AGGATGGATATGGGATATATCCTCTGTGCATTTTCATTTCCCATCGCAAGTTAGGTGGACAGCATCTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610087.2
CDS TCA 72 bp ATTTGGTTTGGCTGTGTTGCCACCCAAATCTCAACTTaGATTGTATCTCCCAGAATTCCCACATATCGTGGG +
Preference number: 6 (lower is better)
Translates to: IWFGCVATQIST*IVSPRIPTYRG
Trigger: CCCACGATATGTGGGAATTCTGGGAGATACAATTCAAGTTGAGATTTGGGTGGCAACACAGCCAAACCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 72 bp AACTCCAAGAAGAACCACAGCAAACCCGAAAGAGCATaGATCATCCATAGCAGTTCTTGGGAAATGTACCTT +
Preference number: 6 (lower is better)
Translates to: NSKKNHSKPERA*IIHSSSWEMYL
Trigger: AAGGTACATTTCCCAAGAACTGCTATGGATGATGCATGCTCTTTCGGGTTTGCTGTGGTTCTTCTTGGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590308.1
ENST00000677910.1
CDS GCA 72 bp CAGCTCTTAGGAATGTCTCACAGTCCAGCTGTGAGCTaGTTAAGGGACAAAATTTTGCAAGTAACAGAGCAA +
Preference number: 6 (lower is better)
Translates to: QLLGMSHSPAVS*LRDKILQVTEQ
Trigger: TTGCTCTGTTACTTGCAAAATTTTGTCCCTTAAGCAGCTCACAGCTGGACTGTGAGACATTCCTAAGAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 72 bp ATGCCACTCTTAACCCTTGATTTGGTTTGGCTGTGTTaGCACCCAAATCTCAACTTGAATTGTATCTCCCAG +
Preference number: 6 (lower is better)
Translates to: MPLLTLDLVWLC*HPNLNLNCISQ
Trigger: CTGGGAGATACAATTCAAGTTGAGATTTGGGTGGCAACACAGCCAAACCAAATCAAGGGTTAAGAGTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp GTAACTCAAGTTTCAGTCTTCGGGGGCATAGTCCAGTaGTGTGTTCCGCTACCTAGTAAAATTCTACTTGAA +
Preference number: 6 (lower is better)
Translates to: VTQVSVFGGIVQ*CVPLPSKILLE
Trigger: TTCAAGTAGAATTTTACTAGGTAGCGGAACACACCACTGGACTATGCCCCCGAAGACTGAAACTTGAGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp AGGCAGAAGGGACTTGCCTTACCTAAAATGAGACTTTaGACTGTGGACTTCTGGGTTAATGCTGAAATGAGT +
Preference number: 6 (lower is better)
Translates to: RQKGLALPKMRL*TVDFWVNAEMS
Trigger: ACTCATTTCAGCATTAACCCAGAAGTCCACAGTCCAAAGTCTCATTTTAGGTAAGGCAAGTCCCTTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp ACGCTCTGTCATTTCCTCCAGGAGATCTTTTCTAAGTaGAAGCCTTCTGTCCAAGACACTCCCATAATGATG +
Preference number: 6 (lower is better)
Translates to: TLCHFLQEIFSK*KPSVQDTPIMM
Trigger: CATCATTATGGGAGTGTCTTGGACAGAAGGCTTCAACTTAGAAAAGATCTCCTGGAGGAAATGACAGAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000677744.1
ENST00000678223.1
CDS CAA 72 bp AGGAACAATAAAGTCAGCCTCATAGTCATCCATCAATaGAATGATGGAAGCGCCTCTACTTTTCCTCGCACC +
Preference number: 6 (lower is better)
Translates to: RNNKVSLIVIHQ*NDGSASTFPRT
Trigger: GGTGCGAGGAAAAGTAGAGGCGCTTCCATCATTCAATTGATGGATGACTATGAGGCTGACTTTATTGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS CAA 90 bp TTCAGTGCTAGGAACAATAAAGTCAGCCTCATAGTCATCCATCAATaGAATGATGGAAGCGCCTCTACTTTTCCTCGCACCAATTCATGC +
Preference number: 6 (lower is better)
Translates to: FSARNNKVSLIVIHQ*NDGSASTFPRTNSC
Trigger: GCATGAATTGGTGCGAGGAAAAGTAGAGGCGCTTCCATCATTCAATTGATGGATGACTATGAGGCTGACTTTATTGTTCCTAGCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678223.1
CDS CAA 90 bp AGCAGAAAGCCAGCATTAGGGTGGAAAATAACAGCCAACATGTTGTaGAGTGACGACTGTGCATGGAATGCTGAATTAGGCATCTTCAAA +
Preference number: 6 (lower is better)
Translates to: SRKPALGWKITANML*SDDCAWNAELGIFK
Trigger: TTTGAAGATGCCTAATTCAGCATTCCATGCACAGTCGTCACTCAACAACATGTTGGCTGTTATTTTCCACCCTAATGCTGGCTTTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp AAGTTGTTTCATTTGCCAAAAGTTTTATCGAGCTCCTaGCACTGCAGGCACTGTTCTAGACCCTTCCTGAAA +
Preference number: 6 (lower is better)
Translates to: KLFHLPKVLSSS*HCRHCSRPFLK
Trigger: TTTCAGGAAGGGTCTAGAACAGTGCCTGCAGTGTCAGGAGCTCGATAAAACTTTTGGCAAATGAAACAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 72 bp CTTAGAGAACAGAGACTTGGAAGACGCTGCGAATACTaGAGGATATTGTGTGTATCCTGTGAAAGCATTTGT +
Preference number: 6 (lower is better)
Translates to: LREQRLGRRCEY*RILCVSCESIC
Trigger: ACAAATGCTTTCACAGGATACACACAATATCCTGCAGTATTCGCAGCGTCTTCCAAGTCTCTGTTCTCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS GCA 72 bp ACGCAGTTCTGCAGAGATAGTGATTTCTTCTTTAGCTaGTCTGATTATCAGGAGAAGCAACGTAGCTCTGTA +
Preference number: 6 (lower is better)
Translates to: TQFCRDSDFFFS*SDYQEKQRSSV
Trigger: TACAGAGCTACGTTGCTTCTCCTGATAATCAGAGCAGCTAAAGAAGAAATCACTATCTCTGCAGAACTGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp GACTATGGGCCATATTTACCACGTTTATCCAGAGAGTaGATTCTCCTTAATACCAGGAAACTAGGCAACAGC +
Preference number: 6 (lower is better)
Translates to: DYGPYLPRLSRE*ILLNTRKLGNS
Trigger: GCTGTTGCCTAGTTTCCTGGTATTAAGGAGAATCAACTCTCTGGATAAACGTGGTAAATATGGCCCATAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587440.1
ENST00000592657.1
CDS CAA 72 bp AAGCCAGCATTAGGGTGGAAAATAACAGCCAACATGTaGTTGAGTGACGACTGTGCATGGAATGCTGAATTA +
Preference number: 6 (lower is better)
Translates to: KPALGWKITANM*LSDDCAWNAEL
Trigger: TAATTCAGCATTCCATGCACAGTCGTCACTCAACAACATGTTGGCTGTTATTTTCCACCCTAATGCTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp TTTTGGAACTGGGTAACAGGCAGAAATCAGATCAGTTaGAAGGGCTCAGAAGAAGACAGGAAAATGTGGGAA +
Preference number: 6 (lower is better)
Translates to: FWNWVTGRNQIS*KGSEEDRKMWE
Trigger: TTCCCACATTTTCCTGTCTTCTTCTGAGCCCTTCAAACTGATCTGATTTCTGCCTGTTACCCAGTTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 90 bp AAAAGATGGGACTATGGGCCATATTTACCACGTTTATCCAGAGAGTaGATTCTCCTTAATACCAGGAAACTAGGCAACAGCTGGAAAGGA +
Preference number: 6 (lower is better)
Translates to: KRWDYGPYLPRLSRE*ILLNTRKLGNSWKG
Trigger: TCCTTTCCAGCTGTTGCCTAGTTTCCTGGTATTAAGGAGAATCAACTCTCTGGATAAACGTGGTAAATATGGCCCATAGTCCCATCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592657.1
CDS TCA 72 bp ACCATGTTAAAGAAATCCTTAGGAAACTTACATGGGTaGTCCCTAAATTACCTTCCGAAGAGCCATGCATGC +
Preference number: 6 (lower is better)
Translates to: TMLKKSLGNLHG*SLNYLPKSHAC
Trigger: GCATGCATGGCTCTTCGGAAGGTAATTTAGGGATCACCCATGTAAGTTTCCTAAGGATTTCTTTAACATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587440.1
CDS GCA 72 bp ACATATTTCCTTAGAGAACAGAGACTTGGAAGACGCTaGGAATACTGCAGGATATTGTGTGTATCCTGTGAA +
Preference number: 6 (lower is better)
Translates to: TYFLREQRLGRR*EYCRILCVSCE
Trigger: TTCACAGGATACACACAATATCCTGCAGTATTCGCAGCGTCTTCCAAGTCTCTGTTCTCTAAGGAAATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676815.1
CDS CAA 72 bp AAGAGACTGGCAACATTTTGCCCCTGCCCTAAAGATTaGTGGAACTTTGAACTTGAAAGAGATGATTTAGGG +
Preference number: 6 (lower is better)
Translates to: KRLATFCPCPKD*WNFELERDDLG
Trigger: CCCTAAATCATCTCTTTCAAGTTCAAAGTTCCACAAATCTTTAGGGCAGGGGCAAAATGTTGCCAGTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp TTTCTGATTTTCTCAATGCCACTCTTAACCCTTGATTaGGTTTGGCTGTGTTGCCACCCAAATCTCAACTTG +
Preference number: 6 (lower is better)
Translates to: FLIFSMPLLTLD*VWLCCHPNLNL
Trigger: CAAGTTGAGATTTGGGTGGCAACACAGCCAAACCAAATCAAGGGTTAAGAGTGGCATTGAGAAAATCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 90 bp CTTGCTGCATTTCTGATTTTCTCAATGCCACTCTTAACCCTTGATTaGGTTTGGCTGTGTTGCCACCCAAATCTCAACTTGAATTGTATC +
Preference number: 6 (lower is better)
Translates to: LAAFLIFSMPLLTLD*VWLCCHPNLNLNCI
Trigger: GATACAATTCAAGTTGAGATTTGGGTGGCAACACAGCCAAACCAAATCAAGGGTTAAGAGTGGCATTGAGAAAATCAGAAATGCAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp GCTTTCAGGGGTGGATTTAGATTTAATTGGCCGGACTaGATCAGAAGAACCATGTTAAAGAAATCCTTAGGA +
Preference number: 6 (lower is better)
Translates to: AFRGGFRFNWPD*IRRTMLKKSLG
Trigger: TCCTAAGGATTTCTTTAACATGGTTCTTCTGATTCAGTCCGGCCAATTAAATCTAAATCCACCCCTGAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587440.1
CDS TCA 72 bp TTCTTCCCAGTCTCGGATATATCTTTATCAGCAGCATaGATCCGGACTAATACAACCCTGAAGTTGAAGAAT +
Preference number: 6 (lower is better)
Translates to: FFPVSDISLSAA*IRTNTTLKLKN
Trigger: ATTCTTCAACTTCAGGGTTGTATTAGTCCGGATTCATGCTGCTGATAAAGATATATCCGAGACTGGGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 72 bp TCTTGCTATGTTTTAGCAAAGAGACTGGCAACATTTTaGCCCTGCCCTAAAGATTTGTGGAACTTTGAACTT +
Preference number: 6 (lower is better)
Translates to: SCYVLAKRLATF*PCPKDLWNFEL
Trigger: AAGTTCAAAGTTCCACAAATCTTTAGGGCAGGGGCAAAATGTTGCCAGTCTCTTTGCTAAAACATAGCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp AAGAACCATGTTAAAGAAATCCTTAGGAAACTTACATaGGTGATCCCTAAATTACCTTCCGAAGAGCCATGC +
Preference number: 6 (lower is better)
Translates to: KNHVKEILRKLT*VIPKLPSEEPC
Trigger: GCATGGCTCTTCGGAAGGTAATTTAGGGATCACCCATGTAAGTTTCCTAAGGATTTCTTTAACATGGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587440.1
CDS CCA 72 bp AGACTGGCAACATTTTGCCCCTGCCCTAAAGATTTGTaGAACTTTGAACTTGAAAGAGATGATTTAGGGTAT +
Preference number: 6 (lower is better)
Translates to: RLATFCPCPKDL*NFELERDDLGY
Trigger: ATACCCTAAATCATCTCTTTCAAGTTCAAAGTTCCACAAATCTTTAGGGCAGGGGCAAAATGTTGCCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp ATTTTCTCAATGCCACTCTTAACCCTTGATTTGGTTTaGCTGTGTTGCCACCCAAATCTCAACTTGAATTGT +
Preference number: 6 (lower is better)
Translates to: IFSMPLLTLDLV*LCCHPNLNLNC
Trigger: ACAATTCAAGTTGAGATTTGGGTGGCAACACAGCCAAACCAAATCAAGGGTTAAGAGTGGCATTGAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp AAATCTTTGTACTTTCACTGTTTTCTGACTCATCCTTaGAATCCTTCTCACAACAGTGTCAAGAGCCTGGAT +
Preference number: 6 (lower is better)
Translates to: KSLYFHCFLTHP*NPSHNSVKSLD
Trigger: ATCCAGGCTCTTGACACTGTTGTGAGAAGGATTTCAAGGATGAGTCAGAAAACAGTGAAAGTACAAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp TGTAGACAGCAGGGACCTATATTCAAAGGTAATGATTaGTTCTCCCAGTACTATTGGTCCTCTTTGATTTTA +
Preference number: 6 (lower is better)
Translates to: CRQQGPIFKGND*FSQYYWSSLIL
Trigger: TAAAATCAAAGAGGACCAATAGTACTGGGAGAAGCAATCATTACCTTTGAATATAGGTCCCTGCTGTCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 90 bp GAAGAAGACAGGAAAATGTGGGAAAGTTTGAAACTTCCTAGAGACTaGTTAAATGGCTTTGCCCAAAATGCTGATAGCAATAAGGACAAT +
Preference number: 6 (lower is better)
Translates to: EEDRKMWESLKLPRD*LNGFAQNADSNKDN
Trigger: ATTGTCCTTATTGCTATCAGCATTTTGGGCAAAGCCATTTAACAAGTCTCTAGGAAGTTTCAAACTTTCCCACATTTTCCTGTCTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS TCA 72 bp AAGGGTTTTACTTATTTAGTGTGGAATTGCCGATGCTaGAGATACTGCAGGAGTTTAGTCATACTTATTGGA +
Preference number: 6 (lower is better)
Translates to: KGFTYLVWNCRC*RYCRSLVILIG
Trigger: TCCAATAAGTATGACTAAACTCCTGCAGTATCTTCAGCATCGGCAATTCCACACTAAATAAGTAAAACCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS GCA 72 bp TTTTCTGAGGAGAAATTCAAGCTGGCTGCAGAAATGTaGATAAATAGCAAGAAGCCTAATGTTAATCTCCAA +
Preference number: 6 (lower is better)
Translates to: FSEEKFKLAAEM*INSKKPNVNLQ
Trigger: TTGGAGATTAACATTAGGCTTCTTGCTATTTATGCACATTTCTGCAGCCAGCTTGAATTTCTCCTCAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CCA 72 bp AATGTAATTTTCTTGCTACCACTTCATAATATAGGTTaGGTATCCCTTATCCAAAATGCCTGGAGTCAGAAG +
Preference number: 6 (lower is better)
Translates to: NVIFLLPLHNIG*VSLIQNAWSQK
Trigger: CTTCTGACTCCAGGCATTTTGGATAAGGGATACCCAACCTATATTATGAAGTGGTAGCAAGAAAATTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587344.2
CDS CCA 72 bp TTTTCTATTTTCCTCAATTCTTCTACATGTACTAACTaGAATTCATCTGAAACTCTTCTCCTCCAGCTTGCG +
Preference number: 6 (lower is better)
Translates to: FSIFLNSSTCTN*NSSETLLLQLA
Trigger: CGCAAGCTGGAGGAGAAGAGTTTCAGATGAATTCCAGTTAGTACATGTAGAAGAATTGAGGAAAATAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677867.1
CDS CCA 72 bp CCTAGTAAAATTCTACTTGAAGACAGTGCTAGTTTTTaGTGGGTCAATTCAATGGCAACTGTATTTGAGACA +
Preference number: 6 (lower is better)
Translates to: PSKILLEDSASF*WVNSMATVFET
Trigger: TGTCTCAAATACAGTTGCCATTGAATTGACCCACCAAAAACTAGCACTGTCTTCAAGTAGAATTTTACTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS CAA 72 bp AGGAAAATGTGGGAAAGTTTGAAACTTCCTAGAGACTaGTTAAATGGCTTTGCCCAAAATGCTGATAGCAAT +
Preference number: 6 (lower is better)
Translates to: RKMWESLKLPRD*LNGFAQNADSN
Trigger: ATTGCTATCAGCATTTTGGGCAAAGCCATTTAACAAGTCTCTAGGAAGTTTCAAACTTTCCCACATTTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679303.1
CDS GCA 72 bp CCACACTTTCTTTTTGCAAGAGTGTACTCTTCACTCTaGAATAAATCTTTGTACTTTCACTGTTTTCTGACT +
Preference number: 6 (lower is better)
Translates to: PHFLFARVYSSL*NKSLYFHCFLT
Trigger: AGTCAGAAAACAGTGAAAGTACAAAGATTTATTGCAGAGTGAAGAGTACACTCTTGCAAAAAGAAAGTGTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587344.2