RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LDB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169744

Ensembl transcript IDs: ENST00000304523.10, ENST00000441778.6, ENST00000502640.5, ENST00000503153.5, ENST00000503829.5, ENST00000504886.5, ENST00000507464.5, ENST00000508918.5, ENST00000509803.1, ENST00000510825.5, ENST00000512345.5, ENST00000515064.5

Found 603 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGACAGACTCAGGTTTGCAGCTGTGGTCTTCTTCTTGCTGCCAGTaGTGTTTGCATTGTTCCCAGCGCTGCTGTTGGAAGTGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: WTDSGLQLWSSSCCQ*CLHCSQRCCWKCCW
Trigger: CCAGCAGCACTTCCAACAGCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR GCA 90 bp ACTCAGGTTTGCAGCTGTGGTCTTCTTCTTGCTGCCAGTGCTGTTTaGATTGTTCCCAGCGCTGCTGTTGGAAGTGCTGCTGGTGGAATT +
Preference number: 1 (lower is better)
Translates to: TQVCSCGLLLAASAV*IVPSAAVGSAAGGI
Trigger: AATTCCACCAGCAGCACTTCCAACAGCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR GCA 90 bp TGCTGCCAGTGCTGTTTGCATTGTTCCCAGCGCTGCTGTTGGAAGTaGTGCTGGTGGAATTTTTCCTTTTTCTCCGTTTGGTTGTTGGTT +
Preference number: 1 (lower is better)
Translates to: CCQCCLHCSQRCCWK*CWWNFSFFSVWLLV
Trigger: AACCAACAACCAAACGGAGAAAAAGGAAAAATTCCACCAGCAGCACTTCCAACAGCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR CCA 90 bp TCTTCTTGCTGCCAGTGCTGTTTGCATTGTTCCCAGCGCTGCTGTTaGAAGTGCTGCTGGTGGAATTTTTCCTTTTTCTCCGTTTGGTTG +
Preference number: 1 (lower is better)
Translates to: SSCCQCCLHCSQRCC*KCCWWNFSFFSVWL
Trigger: CAACCAAACGGAGAAAAAGGAAAAATTCCACCAGCAGCACTTCCAACAGCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR TCA 90 bp TTCAGCACTTGGGCTAAATTGAGTCGACTCAAGACAAGAACCAATTaGCATCAGCTCAACCATAAATTACCTTGCTGGGCCCTCTTAGCT +
Preference number: 1 (lower is better)
Translates to: FSTWAKLSRLKTRTN*HQLNHKLPCWALLA
Trigger: AGCTAAGAGGGCCCAGCAAGGTAATTTATGGTTGAGCTGATGTCAATTGGTTCTTGTCTTGAGTCGACTCAATTTAGCCCAAGTGCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
3UTR CCA 90 bp GGGACTGAGGTTGTAAGTTTTATGTCTCGACATCAGTTCCTGCATTaGCTCCAATATTACACACAACCTGAGGTAGTTGAGGGTGAAGTT +
Preference number: 1 (lower is better)
Translates to: GTEVVSFMSRHQFLH*LQYYTQPEVVEGEV
Trigger: AACTTCACCCTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACTTACAACCTCAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR GCA 90 bp AGGATGCTTCTCGGGACTAACTCTCGGTATTGTCTAATGGTAAAGTaGCATGTTTTGATTCTCATGAGATCATCAAAGGTGAACTCCAAG +
Preference number: 1 (lower is better)
Translates to: RMLLGTNSRYCLMVK*HVLILMRSSKVNSK
Trigger: CTTGGAGTTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAATACCGAGAGTTAGTCCCGAGAAGCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR TCA 90 bp TTCTCTCATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTaGAGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATC +
Preference number: 1 (lower is better)
Translates to: FSHFNYNQCQYLYYL*RPPRKGHGSLLGII
Trigger: GATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAATGAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR TCA 90 bp CTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGCACCCACGGGCCTATTaGCAGTGGATTCTGGTGCCG +
Preference number: 2 (lower is better)
Translates to: LEWREVYCSTGCCSPARVHPRAY*QWILVP
Trigger: CGGCACCAGAATCCACTGTCAATAGGCCCGTGGGTG...CACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR TCA 90 bp AACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAGGGCTTCCCGTGCTGGGTaGCCATGGTACACTGGTCGC +
Preference number: 2 (lower is better)
Translates to: NGVKSQCRGPRRIFDFYRASRAG*PWYTGR
Trigger: GCGACCAGTGTACCATGGTCACCCAGCACGGGAAGC...CCTGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR CCA 90 bp TTCTCCGTTTGGTTGTTGGTTGCCTTGTGGGTTCTGCTGGCGGAGCCACCATCCGTGACCATGGTACACTaGTCGCAGTCCACCGTGATG +
Preference number: 2 (lower is better)
Translates to: FSVWLLVALWVLLAEPPSVTMVH*SQSTVM
Trigger: CATCACGGTGGACTGCGACCAGTGTACCATGGTCAC...GGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR TCA 90 bp ACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACACACCCACGGGCCTATTaGCAGTGGATTCTGGTGCCG +
Preference number: 2 (lower is better)
Translates to: TTGSSLNVGGRDAYLISTHPRAY*QWILVP
Trigger: CGGCACCAGAATCCACTGTCAATAGGCCCGTGGGTG...TGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR CAA 90 bp TGGAAGTGCTGCTGGTGGAATTTTTCCTTTTTCTCCGTTTGGTTGTaGGTTGCCTTGTGGGTTCTGCTGGCGGAGCCACCATCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: WKCCWWNFSFFSVWL*VALWVLLAEPPSSA
Trigger: GGCAGAGGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGGAGAAAAAGGAAAAATTCCACCAGCAGCACTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR CAA 90 bp GACTCAGGTTTGCAGCTGTGGTCTTCTTCTTGCTGCCAGTGCTGTTaGCATTGTTCCCAGCGCTGCTGTTGGAAGTGCTGCTGGTGGAAT +
Preference number: 2 (lower is better)
Translates to: DSGLQLWSSSCCQCC*HCSQRCCWKCCWWN
Trigger: ATTCCACCAGCAGCACTTCCAACAGCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR TCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGCACCCACGGGCCTATTaGCAGTGGATTCTGGTGCCG +
Preference number: 2 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWHPRAY*QWILVP
Trigger: CGGCACCAGAATCCACTGTCAATAGGCCCGTGGGTG...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR TCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGGCGCGGGTGAATTGTTaGAGTCCTCCTCGTCGTCCA +
Preference number: 2 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWARVNC*SPPRRP
Trigger: TGGACGACGAGGAGGACTTCAACAATTCACCCGCGC...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR TCA 90 bp AGAGAAGCTCAGCTTAAAATAACAGTGGGAGGAGTCGGGGAATCTAGGACAGACGCGCGGGTGAATTGTTaGAGTCCTCCTCGTCGTCCA +
Preference number: 2 (lower is better)
Translates to: REAQLKITVGGVGESRTDARVNC*SPPRRP
Trigger: TGGACGACGAGGAGGACTTCAACAATTCACCCGCGC...GTCTGTCCTAGATTCCCCGACTCCTCCCACTGTTATTTTAAGCTGAGCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR-3UTR TCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGGTTCCCCAGCGCGGGTaGATTGTTGAAGTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWVPQRG*IVEVLL
Trigger: GAGGAGGACTTCAACAATTCACCCGCGCTGGGGAAC...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR CCA 90 bp CAGCTTAAAATAACAGTGGGAGGAGTCGGGGAATCTAGGACAGACACACTCGTGCGTCGTCCATGCCGTTaGCCGCATCATATTGCGTGT +
Preference number: 2 (lower is better)
Translates to: QLKITVGGVGESRTDTLVRRPCR*PHHIAC
Trigger: ACACGCAATATGATGCGGCCAACGGCATGGACGACG...CACGAGTGTGTCTGTCCTAGATTCCCCGACTCCTCCCACTGTTATTTTAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR-3UTR CCA 90 bp CCGTTTGGTTGTTGGTTGCCTTGTGGGTTCTGCTGGCGGAGCCACCATCCTCTGGTGATGGATGAGTTGTaGTATGACTCTTTCGAGTGT +
Preference number: 2 (lower is better)
Translates to: PFGCWLPCGFCWRSHHPLVMDEL*YDSFEC
Trigger: ACACTCGAAAGAGTCATACCACAACTCATCCATCAC...CAGAGGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR CCA 90 bp GCAGGTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTCGACATGTGACCATGGTACACTaGTCGCAGTCCACCGTGATG +
Preference number: 2 (lower is better)
Translates to: AGLQAVSGTEVVSFMSRHVTMVH*SQSTVM
Trigger: CATCACGGTGGACTGCGACCAGTGTACCATGGTCAC...ATGTCGAGACATAAAACTTACAACCTCAGTCCCCGAGACTGCCTGAAGACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR TCA 90 bp CTCGGGACTAACTCTCGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCGCTTCCCGTGCTGGGTaGCCATGGTACACTGGTCGC +
Preference number: 2 (lower is better)
Translates to: LGTNSRYCLMVKCHVLILASRAG*PWYTGR
Trigger: GCGACCAGTGTACCATGGTCACCCAGCACGGGAAGC...GAGAATCAAAACATGGCACTTTACCATTAGACAATACCGAGAGTTAGTCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR TCA 90 bp CTGTACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCGGCAGTCTCGGGGACTaGGGTTGTAAGTTTTATGTC +
Preference number: 2 (lower is better)
Translates to: LYNGVKSQCRGPRRIFDFGSLGD*GCKFYV
Trigger: GACATAAAACTTACAACCTCAGTCCCCGAGACTGCC...GAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR GCA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTTTGGCCGCATCATATTaGGTGTTTTCTAATCTAGTG +
Preference number: 2 (lower is better)
Translates to: WREVYCSTGCCSPARVNCLAASY*VFSNLV
Trigger: CACTAGATTAGAAAACACGCAATATGATGCGGCCAA...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR CCA 90 bp ACGGGCCTATTGACAGTGGATTCTGGTGCCGATCATCTTATTGGGAAGCCTGGGATTTGGTCTCTTGAGTaGCGGGAGGTTTACTGTTCC +
Preference number: 2 (lower is better)
Translates to: TGLLTVDSGADHLIGKPGIWSLE*REVYCS
Trigger: GGAACAGTAAACCTCCCGCCACTCAAGAGACCAAAT...CCCAGGCTTCCCAATAAGATGATCGGCACCAGAATCCACTGTCAATAGGCCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR TCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTCACCCACGGGCCTATTaGCAGTGGATTCTGGTGCCG +
Preference number: 2 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIHPRAY*QWILVP
Trigger: CGGCACCAGAATCCACTGTCAATAGGCCCGTGGGTG...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR TCA 90 bp CATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGGGTGGTCGCAGTCCACCGTaGTGGATGAGTTGTGGTATG +
Preference number: 2 (lower is better)
Translates to: HQFLHWLQYYTQPEVVEGGRSPP*WMSCGM
Trigger: CATACCACAACTCATCCATCACGGTGGACTGCGACC...ACCCTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR GCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAACCTCCTCGTCGTCCATaGCGTTGGCCGCATCATATT +
Preference number: 2 (lower is better)
Translates to: ISASICITCEGLQERVMEPPRRP*RWPHHI
Trigger: AATATGATGCGGCCAACGGCATGGACGACGAGGAGG...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR GCA 90 bp CGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGAACATGGGCTTCCCGTaGTGGGTGACCATGGTACAC +
Preference number: 2 (lower is better)
Translates to: RHQFLHWLQYYTQPEVVENMGFP*WVTMVH
Trigger: GTGTACCATGGTCACCCAGCACGGGAAGCCCATGTT...CTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR CCA 90 bp ACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACATCAGGTTTGCAGCTGTaGTCTTCTTCTTGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: TTGSSLNVGGRDAYLISTSGLQL*SSSCCQ
Trigger: CTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGA...TGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR TCA 90 bp AACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAGGTATCTGTATTACCTGTaGAGGCCTCCAAGAAAGGGT +
Preference number: 2 (lower is better)
Translates to: NGVKSQCRGPRRIFDFYRYLYYL*RPPRKG
Trigger: ACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATA...CCTGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR-3UTR CCA 90 bp TTGATTTCTACAGGAAATAAACATCGCCTCCTGATGTGTAACAACCACGCGAGTATGGGCTTCCCGTGCTaGGTGACCATGGTACACTGG +
Preference number: 2 (lower is better)
Translates to: LISTGNKHRLLMCNNHASMGFPC*VTMVHW
Trigger: CCAGTGTACCATGGTCACCCAGCACGGGAAGCCCAT...ACTCGCGTGGTTGTTACACATCAGGAGGCGATGTTTATTTCCTGTAGAAATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR CAA 90 bp TTCTTCTTGCTGCCAGTGCTGTTTGCATTGTTCCCAGCGCTGCTGTaGGAAGTGCTGCTGGTGGAATTTTTCCTTTTTCTCCGTTTGGTT +
Preference number: 2 (lower is better)
Translates to: FFLLPVLFALFPALL*EVLLVEFFLFLRLV
Trigger: AACCAAACGGAGAAAAAGGAAAAATTCCACCAGCAGCACTTCCAACAGCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR TCA 90 bp ACGGGCCTATTGACAGTGGATTCTGGTGCCGATCATCTTATTGGGAAGCCTGGGGCCGAGACGCATATTTaGTTTCTACAGGAAATAAAC +
Preference number: 2 (lower is better)
Translates to: TGLLTVDSGADHLIGKPGAETHI*FLQEIN
Trigger: GTTTATTTCCTGTAGAAATCAAATATGCGTCTCGGC...CCCAGGCTTCCCAATAAGATGATCGGCACCAGAATCCACTGTCAATAGGCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR-3UTR TCA 90 bp ACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACACACCATCACATCCTGTaGACAGCAGCTGACATTATT +
Preference number: 2 (lower is better)
Translates to: TTGSSLNVGGRDAYLISTHHHIL*TAADII
Trigger: AATAATGTCAGCTGCTGTTCACAGGATGTGATGGTG...TGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
3UTR-3UTR GCA 90 bp ACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAAACCGTGCCAGAAGATaGGCTAGAGTTTTCTCTCAT +
Preference number: 2 (lower is better)
Translates to: TTGSSLNVGGRDAYLISTNRARR*ARVFSH
Trigger: ATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTT...TGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR-3UTR GCA 90 bp AACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAGGGGCCCTCTTAGCTGTTaGCCAATGAAAGAAAACATA +
Preference number: 2 (lower is better)
Translates to: NGVKSQCRGPRRIFDFYRGPLSC*PMKENI
Trigger: TATGTTTTCTTTCATTGGGCAACAGCTAAGAGGGCC...CCTGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR-3UTR GCA 90 bp ACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAACTCCAAGATCAGTCTaGCTTCTGTACATACCTTGG +
Preference number: 2 (lower is better)
Translates to: TTGSSLNVGGRDAYLISTTPRSV*LLYIPW
Trigger: CCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGT...TGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR GCA 90 bp AACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAGGCTCGACATCAGTTCCTaGATTGGCTCCAATATTACA +
Preference number: 2 (lower is better)
Translates to: NGVKSQCRGPRRIFDFYRLDISS*IGSNIT
Trigger: TGTAATATTGGAGCCAATGCAGGAACTGATGTCGAG...CCTGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR TCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAACACCCACGGGCCTATTaGCAGTGGATTCTGGTGCCG +
Preference number: 2 (lower is better)
Translates to: ILITISASICITCEGLQEHPRAY*QWILVP
Trigger: CGGCACCAGAATCCACTGTCAATAGGCCCGTGGGTG...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR TCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTATCTGTATTACCTGTaGAGGCCTCCAAGAAAGGGT +
Preference number: 2 (lower is better)
Translates to: SASICITCEGLQERVMEAYLYYL*RPPRKG
Trigger: ACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR TCA 90 bp CAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGAAGCTCAGCTTAAAATCTGATTTGGTCTCTTaGGTGGCGGGAGGTTTACTG +
Preference number: 2 (lower is better)
Translates to: QQLTLLQGNLGREKLSLKSDLVS*VAGGLL
Trigger: CAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGA...TTTTAAGCTGAGCTTCTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR-3UTR TCA 90 bp ATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGGTAAAGGTCGCAGTCCACCGTaGTGGATGAGTTGTGGTATG +
Preference number: 2 (lower is better)
Translates to: IIKGELQDQSAFCTYLGKGRSPP*WMSCGM
Trigger: CATACCACAACTCATCCATCACGGTGGACTGCGACC...TTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR TCA 90 bp CGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGTTAGCCCCATCCTGGTaGTGTTTTTGGACAGCTGAT +
Preference number: 2 (lower is better)
Translates to: RHQFLHWLQYYTQPEVVELAPSW*CFWTAD
Trigger: ATCAGCTGTCCAAAAACATCACCAGGATGGGGCTAA...CTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR CCA 90 bp CTGTACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCAGCACTGAGCATTTATaGACAATATGGCCTTCGTTT +
Preference number: 2 (lower is better)
Translates to: LYNGVKSQCRGPRRIFDFSTEHL*TIWPSF
Trigger: AAACGAAGGCCATATTGTCCATAAATGCTCAGTGCT...GAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR-3UTR TCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTCACCATCACATCCTCTaGGGAGGACTGGAAGTGACT +
Preference number: 2 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFHHHIL*GGLEVT
Trigger: AGTCACTTCCAGTCCTCCTCAGAGGATGTGATGGTG...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441778.6
3UTR-3UTR TCA 90 bp CATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGGGTCACCATCACATCCTGTaGACAGCAGCTGACATTATT +
Preference number: 2 (lower is better)
Translates to: HQFLHWLQYYTQPEVVEGHHHIL*TAADII
Trigger: AATAATGTCAGCTGCTGTTCACAGGATGTGATGGTG...ACCCTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR TCA 90 bp TTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTTAGCCCCATCCTGGTaGTGTTTTTGGACAGCTGAT +
Preference number: 2 (lower is better)
Translates to: LCLDISSCIGSNITHNLRLAPSW*CFWTAD
Trigger: ATCAGCTGTCCAAAAACATCACCAGGATGGGGCTAA...CCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR GCA 90 bp CGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGACTCCAAGATCAGTCTaGCTTCTGTACATACCTTGG +
Preference number: 2 (lower is better)
Translates to: RHQFLHWLQYYTQPEVVETPRSV*LLYIPW
Trigger: CCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGT...CTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR CCA 90 bp TCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGGTGAACTCATGGGCTTCCCGTGCTaGGTGACCATGGTACACTGG +
Preference number: 2 (lower is better)
Translates to: SNGKVPCFDSHEIIKGELMGFPC*VTMVHW
Trigger: CCAGTGTACCATGGTCACCCAGCACGGGAAGCCCAT...GAGTTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR TCA 90 bp CAGCTTAAAATAACAGTGGGAGGAGTCGGGGAATCTAGGACAGACACACTCGTGAAGACAAGAACCAATTaGCATCAGCTCAACCATAAA +
Preference number: 2 (lower is better)
Translates to: QLKITVGGVGESRTDTLVKTRTN*HQLNHK
Trigger: TTTATGGTTGAGCTGATGTCAATTGGTTCTTGTCTT...CACGAGTGTGTCTGTCCTAGATTCCCCGACTCCTCCCACTGTTATTTTAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR-3UTR GCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTTGGCCGCATCATATTaGGTGTTTTCTAATCTAGTG +
Preference number: 2 (lower is better)
Translates to: SASICITCEGLQERVMEALAASY*VFSNLV
Trigger: CACTAGATTAGAAAACACGCAATATGATGCGGCCAA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR GCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAACCTCCTCGTCGTCCATaGCGTTGGCCGCATCATATT +
Preference number: 2 (lower is better)
Translates to: ILITISASICITCEGLQEPPRRP*RWPHHI
Trigger: AATATGATGCGGCCAACGGCATGGACGACGAGGAGG...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR CCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTCCAAGAAAGGGTCATaGAAGCTTACTGGGAATAAT +
Preference number: 2 (lower is better)
Translates to: SASICITCEGLQERVMEASKKGS*KLTGNN
Trigger: ATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR CCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGCATAAATTACCTTGCTaGGCCCTCTTAGCTGTTGCC +
Preference number: 2 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEHKLPC*ALLAVA
Trigger: GGCAACAGCTAAGAGGGCCCAGCAAGGTAATTTATG...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR CCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTCGTCGTCCATGCCGTTaGCCGCATCATATTGCGTGT +
Preference number: 2 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVRRPCR*PHHIAC
Trigger: ACACGCAATATGATGCGGCCAACGGCATGGACGACG...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR CCA 90 bp CATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGGGTGTGATGGATGAGTTGTaGTATGACTCTTTCGAGTGT +
Preference number: 2 (lower is better)
Translates to: HQFLHWLQYYTQPEVVEGVMDEL*YDSFEC
Trigger: ACACTCGAAAGAGTCATACCACAACTCATCCATCAC...ACCCTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR TCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTATCTGTATTACCTGTaGAGGCCTCCAAGAAAGGGT +
Preference number: 2 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEYLYYL*RPPRKG
Trigger: ACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATA...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR TCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGGCACTTGGGCTAAATTaGGTCGACTCAAGACAAGAA +
Preference number: 2 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEALGLN*VDSRQE
Trigger: TTCTTGTCTTGAGTCGACTCAATTTAGCCCAAGTGC...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
3UTR-3UTR GCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGAACCGTGCCAGAAGATaGGCTAGAGTTTTCTCTCAT +
Preference number: 2 (lower is better)
Translates to: KEIQHKHVVKTVPEDALENRARR*ARVFSH
Trigger: ATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTT...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR CCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTCATAAATTACCTTGCTaGGCCCTCTTAGCTGTTGCC +
Preference number: 2 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFHKLPC*ALLAVA
Trigger: GGCAACAGCTAAGAGGGCCCAGCAAGGTAATTTATG...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR CAA 90 bp CTCGGGACTAACTCTCGGTATTGTCTAATGGTAAAGTGCCATGTTTaGATTCTCATGAGATCATCAAAGGTGAACTCCAAGATCAGTCTG +
Preference number: 2 (lower is better)
Translates to: LGTNSRYCLMVKCHV*ILMRSSKVNSKISL
Trigger: CAGACTGATCTTGGAGTTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAATACCGAGAGTTAGTCCCGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR GCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGGGCCCTCTTAGCTGTTaGCCAATGAAAGAAAACATA +
Preference number: 2 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEGPLSC*PMKENI
Trigger: TATGTTTTCTTTCATTGGGCAACAGCTAAGAGGGCC...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR CCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTCTTGTTTCAGCACTTaGGCTAAATTGAGTCGACTC +
Preference number: 2 (lower is better)
Translates to: KEIQHKHVVKTVPEDALESCFST*AKLSRL
Trigger: GAGTCGACTCAATTTAGCCCAAGTGCTGAAACAAGA...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
3UTR-3UTR TCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTCCTGTGAACAGCAGCTaGCATTATTACAGGGAAACC +
Preference number: 2 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVPVNSS*HYYRET
Trigger: GGTTTCCCTGTAATAATGTCAGCTGCTGTTCACAGG...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR-3UTR GCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTAACCATAAATTACCTTaGTGGGCCCTCTTAGCTGTT +
Preference number: 2 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFNHKLP*WALLAV
Trigger: AACAGCTAAGAGGGCCCAGCAAGGTAATTTATGGTT...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR TCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTTATCTGTATTACCTGTaGAGGCCTCCAAGAAAGGGT +
Preference number: 2 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVYLYYL*RPPRKG
Trigger: ACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATA...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
3UTR-3UTR TCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGAAGACAAGAACCAATTaGCATCAGCTCAACCATAAA +
Preference number: 2 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEKTRTN*HQLNHK
Trigger: TTTATGGTTGAGCTGATGTCAATTGGTTCTTGTCTT...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
3UTR-3UTR TCA 90 bp GGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGGTGAACTCCAAGATACTCTTTCGAGTGTTTaGGAATGTAATACAGGTCGG +
Preference number: 2 (lower is better)
Translates to: GKVPCFDSHEIIKGELQDTLSSV*ECNTGR
Trigger: CCGACCTGTATTACATTCTCAAACACTCGAAAGAGT...ATCTTGGAGTTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR GCA 90 bp CAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGAAGCTCAGCTTAAAATGTCTAATGGTAAAGTaGCATGTTTTGATTCTCATG +
Preference number: 2 (lower is better)
Translates to: QQLTLLQGNLGREKLSLKCLMVK*HVLILM
Trigger: CATGAGAATCAAAACATGGCACTTTACCATTAGACA...TTTTAAGCTGAGCTTCTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR TCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTAAGACAAGAACCAATTaGCATCAGCTCAACCATAAA +
Preference number: 2 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFKTRTN*HQLNHK
Trigger: TTTATGGTTGAGCTGATGTCAATTGGTTCTTGTCTT...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
3UTR-3UTR GCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTGGCCCTCTTAGCTGTTaGCCAATGAAAGAAAACATA +
Preference number: 2 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVGPLSC*PMKENI
Trigger: TATGTTTTCTTTCATTGGGCAACAGCTAAGAGGGCC...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
3UTR-3UTR GCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTAACCATAAATTACCTTaGTGGGCCCTCTTAGCTGTT +
Preference number: 2 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVNHKLP*WALLAV
Trigger: AACAGCTAAGAGGGCCCAGCAAGGTAATTTATGGTT...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
3UTR-3UTR CCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTATTGACAGTGGATTCTaGTGCCGATCATCTTATTGG +
Preference number: 2 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVIDSGF*CRSSYW
Trigger: CCAATAAGATGATCGGCACCAGAATCCACTGTCAAT...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR CCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTAGCACTGAGCATTTATaGACAATATGGCCTTCGTTT +
Preference number: 2 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVSTEHL*TIWPSF
Trigger: AAACGAAGGCCATATTGTCCATAAATGCTCAGTGCT...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
3UTR-3UTR CAA 90 bp CTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGCCCAGCGCGGGTGAATaGTTGAAGTCCTCCTCGTCG +
Preference number: 3 (lower is better)
Translates to: LEWREVYCSTGCCSPARVPSAGE*LKSSSS
Trigger: CGACGAGGAGGACTTCAACAATTCACCCGCGCTGGG...CACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR CAA 90 bp TCGTGTACTGTACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTGTGCCGATCATCTTATaGGGAAGCCTGGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: SCTVQRGQVSMSGAETHIVPIIL*GSLGWG
Trigger: CCCCCACCCCAGGCTTCCCAATAAGATGATCGGCAC...AATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGTACAGTACACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR-3UTR CAA 90 bp CCGTTTGGTTGTTGGTTGCCTTGTGGGTTCTGCTGGCGGAGCCACCATCCTCTGACCGTGATGGATGAGTaGTGGTATGACTCTTTCGAG +
Preference number: 3 (lower is better)
Translates to: PFGCWLPCGFCWRSHHPLTVMDE*WYDSFE
Trigger: CTCGAAAGAGTCATACCACAACTCATCCATCACGGT...CAGAGGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR GCA 72 bp TGCAGCTGTGGTCTTCTTCTTGCTGCCAGTGCTGTTTaGATTGTTCCCAGCGCTGCTGTTGGAAGTGCTGCT +
Preference number: 3 (lower is better)
Translates to: CSCGLLLAASAV*IVPSAAVGSAA
Trigger: AGCAGCACTTCCAACAGCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR CCA 72 bp GTAATGATCACCCACGGGCCTATTGACAGTGGATTCTaGTGCCGATCATCTTATTGGGAAGCCTGGGGTGGG +
Preference number: 3 (lower is better)
Translates to: VMITHGPIDSGF*CRSSYWEAWGG
Trigger: CCCACCCCAGGCTTCCCAATAAGATGATCGGCACCAGAATCCACTGTCAATAGGCCCGTGGGTGATCATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR CAA 90 bp TTTCTGATTTGGTCTCTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCACCCACGGGCCTATaGACAGTGGATTCTGGTGCC +
Preference number: 3 (lower is better)
Translates to: FLIWSLEWREVYCSTGCCSPTGL*TVDSGA
Trigger: GGCACCAGAATCCACTGTCAATAGGCCCGTGGGTGA...ACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR CAA 90 bp ACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACATCGTCGTCCATGCCGTaGGCCGCATCATATTGCGTG +
Preference number: 3 (lower is better)
Translates to: TTGSSLNVGGRDAYLISTSSSMP*AASYCV
Trigger: CACGCAATATGATGCGGCCAACGGCATGGACGACGA...TGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR-3UTR CAA 90 bp TTTCTGATTTGGTCTCTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTAGCGCGGGTGAATTGTaGAAGTCCTCCTCGTCGTCC +
Preference number: 3 (lower is better)
Translates to: FLIWSLEWREVYCSTGCCSAGEL*KSSSSS
Trigger: GGACGACGAGGAGGACTTCAACAATTCACCCGCGCT...ACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR CAA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAATCACCCACGGGCCTATaGACAGTGGATTCTGGTGCC +
Preference number: 3 (lower is better)
Translates to: ISASICITCEGLQERVMESPTGL*TVDSGA
Trigger: GGCACCAGAATCCACTGTCAATAGGCCCGTGGGTGA...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR CAA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTCACCTCCCATCAGAGTaGGCTCTCCTACCACCATCA +
Preference number: 3 (lower is better)
Translates to: SASICITCEGLQERVMEAHLPSE*ALLPPS
Trigger: TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTG...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR CAA 90 bp CTGTACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTGGACAGACTCAGGTTaGCAGCTGTGGTCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: LYNGVKSQCRGPRRIFDFWTDSG*QLWSSS
Trigger: AGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCA...GAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR GCA 72 bp GTGGAATTTTTCCTTTTTCTCCGTTTGGTTGTTGGTTaGCTTGTGGGTTCTGCTGGCGGAGCCACCATCCTC +
Preference number: 3 (lower is better)
Translates to: VEFFLFLRLVVG*LVGSAGGATIL
Trigger: GAGGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGGAGAAAAAGGAAAAATTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR CAA 90 bp CAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGAAGCTCAGCTTAAAATCACCCACGGGCCTATaGACAGTGGATTCTGGTGCC +
Preference number: 3 (lower is better)
Translates to: QQLTLLQGNLGREKLSLKSPTGL*TVDSGA
Trigger: GGCACCAGAATCCACTGTCAATAGGCCCGTGGGTGA...TTTTAAGCTGAGCTTCTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR-3UTR CAA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTCCCAGCGCGGGTGAATaGTTGAAGTCCTCCTCGTCG +
Preference number: 3 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIPSAGE*LKSSSS
Trigger: CGACGAGGAGGACTTCAACAATTCACCCGCGCTGGG...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR CAA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTCACCCACGGGCCTATaGACAGTGGATTCTGGTGCC +
Preference number: 3 (lower is better)
Translates to: HKHVVKTVPEDALEFSLISPTGL*TVDSGA
Trigger: GGCACCAGAATCCACTGTCAATAGGCCCGTGGGTGA...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR CAA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTCGTCGTCCATGCCGTaGGCCGCATCATATTGCGTG +
Preference number: 3 (lower is better)
Translates to: HKHVVKTVPEDALEFSLISSSMP*AASYCV
Trigger: CACGCAATATGATGCGGCCAACGGCATGGACGACGA...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR CAA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTAGCGCGGGTGAATTGTaGAAGTCCTCCTCGTCGTCC +
Preference number: 3 (lower is better)
Translates to: HKHVVKTVPEDALEFSLISAGEL*KSSSSS
Trigger: GGACGACGAGGAGGACTTCAACAATTCACCCGCGCT...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR GCA 72 bp TGCTGTTTGCATTGTTCCCAGCGCTGCTGTTGGAAGTaGTGCTGGTGGAATTTTTCCTTTTTCTCCGTTTGG +
Preference number: 3 (lower is better)
Translates to: CCLHCSQRCCWK*CWWNFSFFSVW
Trigger: CCAAACGGAGAAAAAGGAAAAATTCCACCAGCAGCACTTCCAACAGCAGCGCTGGGAACAATGCAAACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR CAA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCACCCACGGGCCTATaGACAGTGGATTCTGGTGCC +
Preference number: 3 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFSPTGL*TVDSGA
Trigger: GGCACCAGAATCCACTGTCAATAGGCCCGTGGGTGA...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR CAA 90 bp AAGTTTTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCCACCTCCCATCAGAGTaGGCTCTCCTACCACCATCA +
Preference number: 3 (lower is better)
Translates to: KFYVSTSVPALAPILHTTHLPSE*ALLPPS
Trigger: TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTG...GGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR-3UTR CAA 90 bp CTGTACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCGGCCGAGACGCATATTaGATTTCTACAGGAAATAAA +
Preference number: 3 (lower is better)
Translates to: LYNGVKSQCRGPRRIFDFGRDAY*ISTGNK
Trigger: TTTATTTCCTGTAGAAATCAAATATGCGTCTCGGCC...GAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
3UTR-3UTR CAA 90 bp CATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGGGTACCGTGATGGATGAGTaGTGGTATGACTCTTTCGAG +
Preference number: 3 (lower is better)
Translates to: HQFLHWLQYYTQPEVVEGTVMDE*WYDSFE
Trigger: CTCGAAAGAGTCATACCACAACTCATCCATCACGGT...ACCCTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR TCA 72 bp TCTGAAACAAGCAGGTCTTCAGGCAGTCTCGGGGACTaGGGTTGTAAGTTTTATGTCTCGACATCAGTTCCT +
Preference number: 3 (lower is better)
Translates to: SETSRSSGSLGD*GCKFYVSTSVP
Trigger: AGGAACTGATGTCGAGACATAAAACTTACAACCTCAGTCCCCGAGACTGCCTGAAGACCTGCTTGTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR CAA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTTCAACACAAACACGTaGTTAAAACCGTGCCAGAAG +
Preference number: 3 (lower is better)
Translates to: SASICITCEGLQERVMEAFNTNT*LKPCQK
Trigger: CTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR CAA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTCACCTCCCATCAGAGTaGGCTCTCCTACCACCATCA +
Preference number: 3 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVHLPSE*ALLPPS
Trigger: TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTG...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR TCA 72 bp AAGATTTGCAATTGTAATGATCACCCACGGGCCTATTaGCAGTGGATTCTGGTGCCGATCATCTTATTGGGA +
Preference number: 3 (lower is better)
Translates to: KICNCNDHPRAY*QWILVPIILLG
Trigger: TCCCAATAAGATGATCGGCACCAGAATCCACTGTCAATAGGCCCGTGGGTGATCATTACAATTGCAAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
3UTR-3UTR CAA 90 bp CGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGCCTTCTGTACATACCTaGGTAAACATGGGCTTCCCG +
Preference number: 3 (lower is better)
Translates to: RYCLMVKCHVLILMRSSKPSVHT*VNMGFP
Trigger: CGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGG...CTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAATACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR CAA 90 bp CATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGGGTGTAAAGTGCCATGTTTaGATTCTCATGAGATCATCA +
Preference number: 3 (lower is better)
Translates to: HQFLHWLQYYTQPEVVEGVKCHV*ILMRSS
Trigger: TGATGATCTCATGAGAATCAAAACATGGCACTTTAC...ACCCTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR TCA 72 bp TTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTaGAGGCCTCCAAGAAAGGGTCATGGAAGCTTACTG +
Preference number: 3 (lower is better)
Translates to: FNYNQCQYLYYL*RPPRKGHGSLL
Trigger: CAGTAAGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR GCA 72 bp CTCGGGACTAACTCTCGGTATTGTCTAATGGTAAAGTaGCATGTTTTGATTCTCATGAGATCATCAAAGGTG +
Preference number: 3 (lower is better)
Translates to: LGTNSRYCLMVK*HVLILMRSSKV
Trigger: CACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAATACCGAGAGTTAGTCCCGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR CCA 72 bp GTTGTAAGTTTTATGTCTCGACATCAGTTCCTGCATTaGCTCCAATATTACACACAACCTGAGGTAGTTGAG +
Preference number: 3 (lower is better)
Translates to: VVSFMSRHQFLH*LQYYTQPEVVE
Trigger: CTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACTTACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
3UTR-3UTR CAA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTTCAACACAAACACGTaGTTAAAACCGTGCCAGAAG +
Preference number: 3 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFFNTNT*LKPCQK
Trigger: CTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAA...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR-3UTR CAA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTAGCACTTGGGCTAAATaGAGTCGACTCAAGACAAGA +
Preference number: 3 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVSTWAK*SRLKTR
Trigger: TCTTGTCTTGAGTCGACTCAATTTAGCCCAAGTGCT...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
3UTR TCA 72 bp AAAATGACATTTCTTGTTTCAGCACTTGGGCTAAATTaGGTCGACTCAAGACAAGAACCAATTGACATCAGC +
Preference number: 3 (lower is better)
Translates to: KMTFLVSALGLN*VDSRQEPIDIS
Trigger: GCTGATGTCAATTGGTTCTTGTCTTGAGTCGACTCAATTTAGCCCAAGTGCTGAAACAAGAAATGTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
3UTR-3UTR CAA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAGGCCGAGACGCATATTaGATTTCTACAGGAAATAAA +
Preference number: 3 (lower is better)
Translates to: ILITISASICITCEGLQEGRDAY*ISTGNK
Trigger: TTTATTTCCTGTAGAAATCAAATATGCGTCTCGGCC...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502640.5
3UTR TCA 72 bp ATTAAACTGCCCACAAAACCAATGGATTACATGGCTTaGAAATATTTGGATCAACAGCAACTTTACAAATGC +
Preference number: 3 (lower is better)
Translates to: IKLPTKPMDYMA*KYLDQQQLYKC
Trigger: GCATTTGTAAAGTTGCTGTTGATCCAAATATTTTCAAGCCATGTAATCCATTGGTTTTGTGGGCAGTTTAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR TCA 90 bp CTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGGCGCGGGTGAATTGTTaGAGTCCTCCTCGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LEWREVYCSTGCCSPARVARVNC*SPPRRP
Trigger: TGGACGACGAGGAGGACTTCAACAATTCACCCGCGC...CACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp CTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGGCTGCCAGTGCTGTTTaGATTGTTCCCAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LEWREVYCSTGCCSPARVAASAV*IVPSAA
Trigger: AGCAGCGCTGGGAACAATGCAAACAGCACTGGCAGC...CACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp CTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGCGTTTGGTTGTTGGTTaGCTTGTGGGTTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LEWREVYCSTGCCSPARVRLVVG*LVGSAG
Trigger: GCCAGCAGAACCCACAAGGCAACCAACAACCAAACG...CACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR TCA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTCCTAGCCCAGGTACCTaGCTGGACAGACTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: WREVYCSTGCCSPARVNCPSPGT*LDRLRF
Trigger: AAACCTGAGTCTGTCCAGTCAGGTACCTGGGCTAGG...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS-3UTR GCA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTAACATGGGCTTCCCGTaGTGGGTGACCATGGTACAC +
Preference number: 4 (lower is better)
Translates to: WREVYCSTGCCSPARVNCNMGFP*WVTMVH
Trigger: GTGTACCATGGTCACCCAGCACGGGAAGCCCATGTT...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTCCTCCTCGTCGTCCATaGCGTTGGCCGCATCATATT +
Preference number: 4 (lower is better)
Translates to: WREVYCSTGCCSPARVNCPPRRP*RWPHHI
Trigger: AATATGATGCGGCCAACGGCATGGACGACGAGGAGG...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp GCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTTGCCTCCTCGTCGTCCATaGCGTTGGCCGCATCATATT +
Preference number: 4 (lower is better)
Translates to: AGGLLFHGLLFPSAGELLPPRRP*RWPHHI
Trigger: AATATGATGCGGCCAACGGCATGGACGACGAGGAGG...CAACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp CCGTTTGGTTGTTGGTTGCCTTGTGGGTTCTGCTGGCGGAGCCACCATCCTCTGGTGACCATGGTACACTaGTCGCAGTCCACCGTGATG +
Preference number: 4 (lower is better)
Translates to: PFGCWLPCGFCWRSHHPLVTMVH*SQSTVM
Trigger: CATCACGGTGGACTGCGACCAGTGTACCATGGTCAC...CAGAGGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR TCA 90 bp GTACACTGGTCGCAGTCCACCGTGATGGATGAGTTGTGGTATGACTCTTTCGAGGCTTCCCGTGCTGGGTaGCCATGGTACACTGGTCGC +
Preference number: 4 (lower is better)
Translates to: VHWSQSTVMDELWYDSFEASRAG*PWYTGR
Trigger: GCGACCAGTGTACCATGGTCACCCAGCACGGGAAGC...CTCGAAAGAGTCATACCACAACTCATCCATCACGGTGGACTGCGACCAGTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp CTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGTCCTCTGTGCGAGACTaGAGTCTCTTGTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: LEWREVYCSTGCCSPARVSSVRD*SLLFIS
Trigger: TGAGATGAACAAGAGACTGCAGTCTCGCACAGAGGA...CACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR TCA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTTCTGATTTGGTCTCTTaGGTGGCGGGAGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: WREVYCSTGCCSPARVNCSDLVS*VAGGLL
Trigger: CAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGA...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp CAGTGGGAGGAGTCGGGGAATCTAGGACAGACACACTCGTGTACTGTACAACGGGTGACCATGGTACACTaGTCGCAGTCCACCGTGATG +
Preference number: 4 (lower is better)
Translates to: QWEESGNLGQTHSCTVQRVTMVH*SQSTVM
Trigger: CATCACGGTGGACTGCGACCAGTGTACCATGGTCAC...CCGTTGTACAGTACACGAGTGTGTCTGTCCTAGATTCCCCGACTCCTCCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CCA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTGATCTTGTGCATGCATaGCTAGGATGCTTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: WREVYCSTGCCSPARVNCDLVHA*LGCFSG
Trigger: TCCCGAGAAGCATCCTAGCCATGCATGCACAAGATC...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTTCTCCGTTTGGTTGTTaGTTGCCTTGTGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: WREVYCSTGCCSPARVNCSPFGC*LPCGFC
Trigger: GCAGAACCCACAAGGCAACCAACAACCAAACGGAGA...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp CCCTCCTTCAAACACAGTGCTAAAGTAACGGGGGATGAGGGTCCTGCCGATAGCTCCCAGCGCTGCTGTTaGAAGTGCTGCTGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: PSFKHSAKVTGDEGPADSSQRCC*KCCWWN
Trigger: ATTCCACCAGCAGCACTTCCAACAGCAGCGCTGGGA...GCTATCGGCAGGACCCTCATCCCCCGTTACTTTAGCACTGTGTTTGAAGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR TCA 90 bp CTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGACTCTTTCGAGTGTTTaGGAATGTAATACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: LEWREVYCSTGCCSPARVTLSSV*ECNTGR
Trigger: CCGACCTGTATTACATTCTCAAACACTCGAAAGAGT...CACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR TCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTGCTTCCCGTGCTGGGTaGCCATGGTACACTGGTCGC +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAASRAG*PWYTGR
Trigger: GCGACCAGTGTACCATGGTCACCCAGCACGGGAAGC...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGGCTTCCCGTGCTGGGTaGCCATGGTACACTGGTCGC +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWASRAG*PWYTGR
Trigger: GCGACCAGTGTACCATGGTCACCCAGCACGGGAAGC...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp CTGTACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCGTTCCCCAGCGCGGGTaGATTGTTGAAGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LYNGVKSQCRGPRRIFDFVPQRG*IVEVLL
Trigger: GAGGAGGACTTCAACAATTCACCCGCGCTGGGGAAC...GAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR CCA 90 bp CTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGGTGATGGATGAGTTGTaGTATGACTCTTTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: LEWREVYCSTGCCSPARVVMDEL*YDSFEC
Trigger: ACACTCGAAAGAGTCATACCACAACTCATCCATCAC...CACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp GTGGGAGGAGTCGGGGAATCTAGGACAGACACACTCGTGTACTGTACAACGGGGTCAGGTTTGCAGCTGTaGTCTTCTTCTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VGGVGESRTDTLVYCTTGSGLQL*SSSCCQ
Trigger: CTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGA...CCCCGTTGTACAGTACACGAGTGTGTCTGTCCTAGATTCCCCGACTCCTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CCA 90 bp TTCTCCGTTTGGTTGTTGGTTGCCTTGTGGGTTCTGCTGGCGGAGCCACCATCCTCAGGTTTGCAGCTGTaGTCTTCTTCTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: FSVWLLVALWVLLAEPPSSGLQL*SSSCCQ
Trigger: CTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGA...GGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CCA 90 bp CAGTGGGAGGAGTCGGGGAATCTAGGACAGACACACTCGTGTACTGTACAACGGGGGGGTTTTCTGATTTaGTCTCTTGAGTGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: QWEESGNLGQTHSCTVQRGGFLI*SLEWRE
Trigger: CTCCCGCCACTCAAGAGACCAAATCAGAAAACCCCC...CCGTTGTACAGTACACGAGTGTGTCTGTCCTAGATTCCCCGACTCCTCCCACTG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR CCA 90 bp CTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGTCTTGTTTCAGCACTTaGGCTAAATTGAGTCGACTC +
Preference number: 4 (lower is better)
Translates to: LEWREVYCSTGCCSPARVSCFST*AKLSRL
Trigger: GAGTCGACTCAATTTAGCCCAAGTGCTGAAACAAGA...CACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp ACGGGCCTATTGACAGTGGATTCTGGTGCCGATCATCTTATTGGGAAGCCTGGGGCCCAGGTACCTGACTaGACAGACTCAGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: TGLLTVDSGADHLIGKPGAQVPD*TDSGLQ
Trigger: CTGCAAACCTGAGTCTGTCCAGTCAGGTACCTGGGC...CCCAGGCTTCCCAATAAGATGATCGGCACCAGAATCCACTGTCAATAGGCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441778.6
3UTR CAA 72 bp TTGCAGCTGTGGTCTTCTTCTTGCTGCCAGTGCTGTTaGCATTGTTCCCAGCGCTGCTGTTGGAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LQLWSSSCCQCC*HCSQRCCWKCC
Trigger: GCAGCACTTCCAACAGCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR TCA 90 bp AACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAGGGGTCGCAGTCCACCGTaGTGGATGAGTTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: NGVKSQCRGPRRIFDFYRGRSPP*WMSCGM
Trigger: CATACCACAACTCATCCATCACGGTGGACTGCGACC...CCTGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR TCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTCACCCACGGGCCTATTaGCAGTGGATTCTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAHPRAY*QWILVP
Trigger: CGGCACCAGAATCCACTGTCAATAGGCCCGTGGGTG...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTGAGGAGGACTGGAAGTaGCTCCTTTCAGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAEEDWK*LLSGPL
Trigger: GAGGGGCCCTGAAAGGAGTCACTTCCAGTCCTCCTC...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS-3UTR TCA 90 bp GTGGGAGGAGTCGGGGAATCTAGGACAGACACACTCGTGTACTGTACAACGGGGCCTGTGAACAGCAGCTaGCATTATTACAGGGAAACC +
Preference number: 4 (lower is better)
Translates to: VGGVGESRTDTLVYCTTGPVNSS*HYYRET
Trigger: GGTTTCCCTGTAATAATGTCAGCTGCTGTTCACAGG...CCCCGTTGTACAGTACACGAGTGTGTCTGTCCTAGATTCCCCGACTCCTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR GCA 90 bp GCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTTGACTCCAAGATCAGTCTaGCTTCTGTACATACCTTGG +
Preference number: 4 (lower is better)
Translates to: AGGLLFHGLLFPSAGELLTPRSV*LLYIPW
Trigger: CCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGT...CAACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp CAGTGGGAGGAGTCGGGGAATCTAGGACAGACACACTCGTGTACTGTACAACGGCATGCATGGCTAGGATaGTTCTCGGGACTAACTCTC +
Preference number: 4 (lower is better)
Translates to: QWEESGNLGQTHSCTVQRHAWLG*FSGLTL
Trigger: GAGAGTTAGTCCCGAGAAGCATCCTAGCCATGCATG...CCGTTGTACAGTACACGAGTGTGTCTGTCCTAGATTCCCCGACTCCTCCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR GCA 90 bp CAGTGGGAGGAGTCGGGGAATCTAGGACAGACACACTCGTGTACTGTACAACGGCGCTGCTGTTGGAAGTaGTGCTGGTGGAATTTTTCC +
Preference number: 4 (lower is better)
Translates to: QWEESGNLGQTHSCTVQRRCCWK*CWWNFS
Trigger: GGAAAAATTCCACCAGCAGCACTTCCAACAGCAGCG...CCGTTGTACAGTACACGAGTGTGTCTGTCCTAGATTCCCCGACTCCTCCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR GCA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTAACCGTGCCAGAAGATaGGCTAGAGTTTTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: WREVYCSTGCCSPARVNCNRARR*ARVFSH
Trigger: ATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTT...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp GCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTTGAACCGTGCCAGAAGATaGGCTAGAGTTTTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: AGGLLFHGLLFPSAGELLNRARR*ARVFSH
Trigger: ATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTT...CAACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp GCAGGTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTCGACATATGGGCTTCCCGTGCTaGGTGACCATGGTACACTGG +
Preference number: 4 (lower is better)
Translates to: AGLQAVSGTEVVSFMSRHMGFPC*VTMVHW
Trigger: CCAGTGTACCATGGTCACCCAGCACGGGAAGCCCAT...ATGTCGAGACATAAAACTTACAACCTCAGTCCCCGAGACTGCCTGAAGACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR TCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTGGCAGGCAGGCAGGCTaGACACGCTGGCTGGGAACT +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIGRQAG*TRWLGT
Trigger: AGTTCCCAGCCAGCGTGTTCAGCCTGCCTGCCTGCC...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304523.10
CDS-3UTR TCA 90 bp GTGGGAGGAGTCGGGGAATCTAGGACAGACACACTCGTGTACTGTACAACGGGGGCACTTGGGCTAAATTaGGTCGACTCAAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: VGGVGESRTDTLVYCTTGALGLN*VDSRQE
Trigger: TTCTTGTCTTGAGTCGACTCAATTTAGCCCAAGTGC...CCCCGTTGTACAGTACACGAGTGTGTCTGTCCTAGATTCCCCGACTCCTCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR GCA 90 bp ACCATGGTACACTGGTCGCAGTCCACCGTGATGGATGAGTTGTGGTATGACTCTAGGGGTCATGTGGTGTaGTGGACATCTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: TMVHWSQSTVMDELWYDSRGHVV*WTSCLL
Trigger: AAGCAGGCAAGATGTCCAGCACACCACATGACCCCT...AGAGTCATACCACAACTCATCCATCACGGTGGACTGCGACCAGTGTACCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp ACGGGCCTATTGACAGTGGATTCTGGTGCCGATCATCTTATTGGGAAGCCTGGGATAGAAGGGGTCATGTaGTGTGCTGGACATCTTGCC +
Preference number: 4 (lower is better)
Translates to: TGLLTVDSGADHLIGKPGIEGVM*CAGHLA
Trigger: GGCAAGATGTCCAGCACACCACATGACCCCTTCTAT...CCCAGGCTTCCCAATAAGATGATCGGCACCAGAATCCACTGTCAATAGGCCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTGTGATGGATGAGTTGTaGTATGACTCTTTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: WREVYCSTGCCSPARVNCVMDEL*YDSFEC
Trigger: ACACTCGAAAGAGTCATACCACAACTCATCCATCAC...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGATGGGCTTCCCGTGCTaGGTGACCATGGTACACTGG +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWMGFPC*VTMVHW
Trigger: CCAGTGTACCATGGTCACCCAGCACGGGAAGCCCAT...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAACCTTGTGGGTTCTGCTaGCGGAGCCACCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMEPCGFC*RSHHPL
Trigger: CAGAGGATGGTGGCTCCGCCAGCAGAACCCACAAGG...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CAGCTTAAAATAACAGTGGGAGGAGTCGGGGAATCTAGGACAGACACACTCGTGTTGTTGGTTGCCTTGTaGGTTCTGCTGGCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QLKITVGGVGESRTDTLVLLVAL*VLLAEP
Trigger: TGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAA...CACGAGTGTGTCTGTCCTAGATTCCCCGACTCCTCCCACTGTTATTTTAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CCA 90 bp TTCTCCGTTTGGTTGTTGGTTGCCTTGTGGGTTCTGCTGGCGGAGCCACCATCCTCCTTTTTCTCCGTTTaGTTGTTGGTTGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: FSVWLLVALWVLLAEPPSSFFSV*LLVALW
Trigger: CCACAAGGCAACCAACAACCAAACGGAGAAAAAGGA...GGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CCA 90 bp CTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGGTGCCTTTACATGTGTaGAGGAACATATTAATATGC +
Preference number: 4 (lower is better)
Translates to: LEWREVYCSTGCCSPARVVPLHV*RNILIC
Trigger: GCATATTAATATGTTCCTCCACACATGTAAAGGCAC...CACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR TCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTGGTCGCAGTCCACCGTaGTGGATGAGTTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAGRSPP*WMSCGM
Trigger: CATACCACAACTCATCCATCACGGTGGACTGCGACC...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGGCTTCCCGTGCTGGGTaGCCATGGTACACTGGTCGC +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEASRAG*PWYTGR
Trigger: GCGACCAGTGTACCATGGTCACCCAGCACGGGAAGC...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp TCGTGTACTGTACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTTAGCCCCATCCTGGTaGTGTTTTTGGACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SCTVQRGQVSMSGAETHILAPSW*CFWTAD
Trigger: ATCAGCTGTCCAAAAACATCACCAGGATGGGGCTAA...AATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGTACAGTACACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR TCA 90 bp ACCATGGTACACTGGTCGCAGTCCACCGTGATGGATGAGTTGTGGTATGACTCTGGCAGTCTCGGGGACTaGGGTTGTAAGTTTTATGTC +
Preference number: 4 (lower is better)
Translates to: TMVHWSQSTVMDELWYDSGSLGD*GCKFYV
Trigger: GACATAAAACTTACAACCTCAGTCCCCGAGACTGCC...AGAGTCATACCACAACTCATCCATCACGGTGGACTGCGACCAGTGTACCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR TCA 90 bp ATCACATCCTGTGAACAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGGCGCGGGTGAATTGTTaGAGTCCTCCTCGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: ITSCEQQLTLLQGNLGREARVNC*SPPRRP
Trigger: TGGACGACGAGGAGGACTTCAACAATTCACCCGCGC...CTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTGTTCACAGGATGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR TCA 90 bp CAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGAAGCTCAGCTTAAAACACCCACGGGCCTATTaGCAGTGGATTCTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: QQLTLLQGNLGREKLSLKHPRAY*QWILVP
Trigger: CGGCACCAGAATCCACTGTCAATAGGCCCGTGGGTG...TTTTAAGCTGAGCTTCTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR TCA 90 bp TCGTGTACTGTACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTCTAGCAATAGGTACCTaGCTGGACAGACTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SCTVQRGQVSMSGAETHILAIGT*LDRLRF
Trigger: AAACCTGAGTCTGTCCAGTCAGGTACCTATTGCTAG...AATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGTACAGTACACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR GCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAACATGGGCTTCCCGTaGTGGGTGACCATGGTACAC +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWNMGFP*WVTMVH
Trigger: GTGTACCATGGTCACCCAGCACGGGAAGCCCATGTT...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAATTGCCTTGTGGGTTCTaGTGGCGGAGCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMELPCGF*WRSHHP
Trigger: AGGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAA...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCTTGCCTTGTGGGTTCTaGTGGCGGAGCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: PLAASYCVFSNLVISLSSLPCGF*WRSHHP
Trigger: AGGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAA...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCGGCCAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGCATTGTTCCCAGCGCTaGTGTTGGAAGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWHCSQR*CWKCCW
Trigger: CCAGCAGCACTTCCAACAGCAGCGCTGGGAACAATG...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTGCTGCCAGTGCTGTTTaGATTGTTCCCAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAAASAV*IVPSAA
Trigger: AGCAGCGCTGGGAACAATGCAAACAGCACTGGCAGC...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTATGCCTCCTATAAAATaGGCCGAAAGGAGAAGAATA +
Preference number: 4 (lower is better)
Translates to: WREVYCSTGCCSPARVNCMPPIK*AERRRI
Trigger: TATTCTTCTCCTTTCGGCCCATTTTATAGGAGGCAT...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTGTGACCATGGTACACTaGTCGCAGTCCACCGTGATG +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAVTMVH*SQSTVM
Trigger: CATCACGGTGGACTGCGACCAGTGTACCATGGTCAC...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCATGGGCTTCCCGTGCTaGGTGACCATGGTACACTGG +
Preference number: 4 (lower is better)
Translates to: PLAASYCVFSNLVISLSSMGFPC*VTMVHW
Trigger: CCAGTGTACCATGGTCACCCAGCACGGGAAGCCCAT...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCGGCCAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAATGGGCTTCCCGTGCTaGGTGACCATGGTACACTGG +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMEMGFPC*VTMVHW
Trigger: CCAGTGTACCATGGTCACCCAGCACGGGAAGCCCAT...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CTGTACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCGATCTTGTGCATGCATaGCTAGGATGCTTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: LYNGVKSQCRGPRRIFDFDLVHA*LGCFSG
Trigger: TCCCGAGAAGCATCCTAGCCATGCATGCACAAGATC...GAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGACCTTGTGGGTTCTGCTaGCGGAGCCACCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRPCGFC*RSHHPL
Trigger: CAGAGGATGGTGGCTCCGCCAGCAGAACCCACAAGG...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGTTGTTGGTTGCCTTGTaGGTTCTGCTGGCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWLLVAL*VLLAEP
Trigger: TGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAA...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp GTACACTGGTCGCAGTCCACCGTGATGGATGAGTTGTGGTATGACTCTTTCGAGTCTCCGTTTGGTTGTTaGTTGCCTTGTGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VHWSQSTVMDELWYDSFESPFGC*LPCGFC
Trigger: GCAGAACCCACAAGGCAACCAACAACCAAACGGAGA...CTCGAAAGAGTCATACCACAACTCATCCATCACGGTGGACTGCGACCAGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGTCCCAGCGCTGCTGTTaGAAGTGCTGCTGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWSQRCC*KCCWWN
Trigger: ATTCCACCAGCAGCACTTCCAACAGCAGCGCTGGGA...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTCCCAGCGCTGCTGTTaGAAGTGCTGCTGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEASQRCC*KCCWWN
Trigger: ATTCCACCAGCAGCACTTCCAACAGCAGCGCTGGGA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
3UTR CAA 72 bp AATTTTTCCTTTTTCTCCGTTTGGTTGTTGGTTGCCTaGTGGGTTCTGCTGGCGGAGCCACCATCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NFSFFSVWLLVA*WVLLAEPPSSA
Trigger: GGCAGAGGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGGAGAAAAAGGAAAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR CAA 72 bp GGTGGAATTTTTCCTTTTTCTCCGTTTGGTTGTTGGTaGCCTTGTGGGTTCTGCTGGCGGAGCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: GGIFPFSPFGCW*PCGFCWRSHHP
Trigger: AGGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGGAGAAAAAGGAAAAATTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508918.5
3UTR CAA 72 bp TGCTGCTGGTGGAATTTTTCCTTTTTCTCCGTTTGGTaGTTGGTTGCCTTGTGGGTTCTGCTGGCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: CCWWNFSFFSVW*LVALWVLLAEP
Trigger: TGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGGAGAAAAAGGAAAAATTCCACCAGCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR TCA 90 bp AAACAAGCAGGTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTGGTCGCAGTCCACCGTaGTGGATGAGTTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: KQAGLQAVSGTEVVSFMSGRSPP*WMSCGM
Trigger: CATACCACAACTCATCCATCACGGTGGACTGCGACC...AGACATAAAACTTACAACCTCAGTCCCCGAGACTGCCTGAAGACCTGCTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR TCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTGCTTCCCGTGCTGGGTaGCCATGGTACACTGGTCGC +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFASRAG*PWYTGR
Trigger: GCGACCAGTGTACCATGGTCACCCAGCACGGGAAGC...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp ATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGGTAAAGCTTCCCGTGCTGGGTaGCCATGGTACACTGGTCGC +
Preference number: 4 (lower is better)
Translates to: IIKGELQDQSAFCTYLGKASRAG*PWYTGR
Trigger: GCGACCAGTGTACCATGGTCACCCAGCACGGGAAGC...TTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR TCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAGCGCGGGTGAATTGTTaGAGTCCTCCTCGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRARVNC*SPPRRP
Trigger: TGGACGACGAGGAGGACTTCAACAATTCACCCGCGC...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGCACCCACGGGCCTATTaGCAGTGGATTCTGGTGCCG +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEHPRAY*QWILVP
Trigger: CGGCACCAGAATCCACTGTCAATAGGCCCGTGGGTG...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp AACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAGGCCTGTGAACAGCAGCTaGCATTATTACAGGGAAACC +
Preference number: 4 (lower is better)
Translates to: NGVKSQCRGPRRIFDFYRPVNSS*HYYRET
Trigger: GGTTTCCCTGTAATAATGTCAGCTGCTGTTCACAGG...CCTGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR GCA 90 bp CAGTGGGAGGAGTCGGGGAATCTAGGACAGACACACTCGTGTACTGTACAACGGGCTGGACATCTTGCCTaGTTTTCGAAAATCAAGCTA +
Preference number: 4 (lower is better)
Translates to: QWEESGNLGQTHSCTVQRAGHLA*FSKIKL
Trigger: TAGCTTGATTTTCGAAAAGCAGGCAAGATGTCCAGC...CCGTTGTACAGTACACGAGTGTGTCTGTCCTAGATTCCCCGACTCCTCCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR GCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAAACATGGGCTTCCCGTaGTGGGTGACCATGGTACAC +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMENMGFP*WVTMVH
Trigger: GTGTACCATGGTCACCCAGCACGGGAAGCCCATGTT...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGAAGCTCAGCTTAAAATTGCCTTGTGGGTTCTaGTGGCGGAGCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: QQLTLLQGNLGREKLSLKLPCGF*WRSHHP
Trigger: AGGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAA...TTTTAAGCTGAGCTTCTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR GCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGCGTTTGGTTGTTGGTTaGCTTGTGGGTTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWRLVVG*LVGSAG
Trigger: GCCAGCAGAACCCACAAGGCAACCAACAACCAAACG...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAACATTGTTCCCAGCGCTaGTGTTGGAAGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMEHCSQR*CWKCCW
Trigger: CCAGCAGCACTTCCAACAGCAGCGCTGGGAACAATG...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp GGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGGTAAACATGGGCTTCATTGTTCCCAGCGCTaGTGTTGGAAGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GELQDQSAFCTYLGKHGLHCSQR*CWKCCW
Trigger: CCAGCAGCACTTCCAACAGCAGCGCTGGGAACAATG...AAGCCCATGTTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR GCA 90 bp CATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGGGTGCTGCCAGTGCTGTTTaGATTGTTCCCAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: HQFLHWLQYYTQPEVVEGAASAV*IVPSAA
Trigger: AGCAGCGCTGGGAACAATGCAAACAGCACTGGCAGC...ACCCTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CCA 90 bp ACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAGGTCATGTGGTGTGCTaGACATCTTGCCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: TTGSSLNVGGRDAYLISTGHVVC*TSCLLF
Trigger: GAAAAGCAGGCAAGATGTCCAGCACACCACATGACC...TGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CCA 90 bp GCAGGTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTCGACATATAGAAGGGGTCATGTaGTGTGCTGGACATCTTGCC +
Preference number: 4 (lower is better)
Translates to: AGLQAVSGTEVVSFMSRHIEGVM*CAGHLA
Trigger: GGCAAGATGTCCAGCACACCACATGACCCCTTCTAT...ATGTCGAGACATAAAACTTACAACCTCAGTCCCCGAGACTGCCTGAAGACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp TTCTCCGTTTGGTTGTTGGTTGCCTTGTGGGTTCTGCTGGCGGAGCCACCATCCATGCCTCCTATAAAATaGGCCGAAAGGAGAAGAATA +
Preference number: 4 (lower is better)
Translates to: FSVWLLVALWVLLAEPPSMPPIK*AERRRI
Trigger: TATTCTTCTCCTTTCGGCCCATTTTATAGGAGGCAT...GGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CCA 90 bp GCAGGTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTCGACATGATCTTGTGCATGCATaGCTAGGATGCTTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: AGLQAVSGTEVVSFMSRHDLVHA*LGCFSG
Trigger: TCCCGAGAAGCATCCTAGCCATGCATGCACAAGATC...ATGTCGAGACATAAAACTTACAACCTCAGTCCCCGAGACTGCCTGAAGACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR TCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTGGCAGTCTCGGGGACTaGGGTTGTAAGTTTTATGTC +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAGSLGD*GCKFYV
Trigger: GACATAAAACTTACAACCTCAGTCCCCGAGACTGCC...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTGTTCCCCAGCGCGGGTaGATTGTTGAAGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIVPQRG*IVEVLL
Trigger: GAGGAGGACTTCAACAATTCACCCGCGCTGGGGAAC...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGTCTGATTTGGTCTCTTaGGTGGCGGGAGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWSDLVS*VAGGLL
Trigger: CAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGA...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp GTACACTGGTCGCAGTCCACCGTGATGGATGAGTTGTGGTATGACTCTTTCGAGCACCATCACATCCTGTaGACAGCAGCTGACATTATT +
Preference number: 4 (lower is better)
Translates to: VHWSQSTVMDELWYDSFEHHHIL*TAADII
Trigger: AATAATGTCAGCTGCTGTTCACAGGATGTGATGGTG...CTCGAAAGAGTCATACCACAACTCATCCATCACGGTGGACTGCGACCAGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR GCA 90 bp CCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCAGGGGTCATGTGGTGTaGTGGACATCTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PLAASYCVFSNLVISLSSRGHVV*WTSCLL
Trigger: AAGCAGGCAAGATGTCCAGCACACCACATGACCCCT...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCGGCCAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp CAGCTTAAAATAACAGTGGGAGGAGTCGGGGAATCTAGGACAGACACACTCGTGTGTCACTATCCTCTGTaGGAGACTGCAGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: QLKITVGGVGESRTDTLVCHYPL*ETAVSC
Trigger: ACAAGAGACTGCAGTCTCGCACAGAGGATAGTGACA...CACGAGTGTGTCTGTCCTAGATTCCCCGACTCCTCCCACTGTTATTTTAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR GCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTCATGCATGGCTAGGATaGTTCTCGGGACTAACTCTC +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAHAWLG*FSGLTL
Trigger: GAGAGTTAGTCCCGAGAAGCATCCTAGCCATGCATG...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGCATGCATGGCTAGGATaGTTCTCGGGACTAACTCTC +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWHAWLG*FSGLTL
Trigger: GAGAGTTAGTCCCGAGAAGCATCCTAGCCATGCATG...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGACATTGTTCCCAGCGCTaGTGTTGGAAGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRHCSQR*CWKCCW
Trigger: CCAGCAGCACTTCCAACAGCAGCGCTGGGAACAATG...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGAAGCTCAGCTTAAAACATTGTTCCCAGCGCTaGTGTTGGAAGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QQLTLLQGNLGREKLSLKHCSQR*CWKCCW
Trigger: CCAGCAGCACTTCCAACAGCAGCGCTGGGAACAATG...TTTTAAGCTGAGCTTCTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR GCA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTTCAGGTTTATTAAACTaGCCACAAAACCAATGGATT +
Preference number: 4 (lower is better)
Translates to: WREVYCSTGCCSPARVNCSGLLN*PQNQWI
Trigger: AATCCATTGGTTTTGTGGGCAGTTTAATAAACCTGA...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp AGAGAAGCTCAGCTTAAAATAACAGTGGGAGGAGTCGGGGAATCTAGGACAGACGGTCATGTGGTGTGCTaGACATCTTGCCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: REAQLKITVGGVGESRTDGHVVC*TSCLLF
Trigger: GAAAAGCAGGCAAGATGTCCAGCACACCACATGACC...GTCTGTCCTAGATTCCCCGACTCCTCCCACTGTTATTTTAAGCTGAGCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGATGGGCTTCCCGTGCTaGGTGACCATGGTACACTGG +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEMGFPC*VTMVHW
Trigger: CCAGTGTACCATGGTCACCCAGCACGGGAAGCCCAT...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTGATCTTGTGCATGCATaGCTAGGATGCTTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEADLVHA*LGCFSG
Trigger: TCCCGAGAAGCATCCTAGCCATGCATGCACAAGATC...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGAAGCTCAGCTTAAAATTGTTGGTTGCCTTGTaGGTTCTGCTGGCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QQLTLLQGNLGREKLSLKLLVAL*VLLAEP
Trigger: TGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAA...TTTTAAGCTGAGCTTCTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGATCCCAGCGCTGCTGTTaGAAGTGCTGCTGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRSQRCC*KCCWWN
Trigger: ATTCCACCAGCAGCACTTCCAACAGCAGCGCTGGGA...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTCAGGTTTGCAGCTGTaGTCTTCTTCTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEASGLQL*SSSCCQ
Trigger: CTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGCATCAGGTACCTGACTaGACAGACTCAGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWHQVPD*TDSGLQ
Trigger: CTGCAAACCTGAGTCTGTCCAGTCAGGTACCTGATG...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304523.10
ENST00000507464.5
CDS-3UTR CCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGACGTCGTCCATGCCGTTaGCCGCATCATATTGCGTGT +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRRRPCR*PHHIAC
Trigger: ACACGCAATATGATGCGGCCAACGGCATGGACGACG...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGGGGGTTTTCTGATTTaGTCTCTTGAGTGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMEGGFLI*SLEWRE
Trigger: CTCCCGCCACTCAAGAGACCAAATCAGAAAACCCCC...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCGGGGGTTTTCTGATTTaGTCTCTTGAGTGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: PLAASYCVFSNLVISLSSGGFLI*SLEWRE
Trigger: CTCCCGCCACTCAAGAGACCAAATCAGAAAACCCCC...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCGGCCAACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp TTTCGAGTGTTTGAGAATGTAATACAGGTCGGTCACCCCTCCTTCAAACACAGTTCCGAATCCCCGAGCTaGTTGCAGTTTCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: FRVFENVIQVGHPSFKHSSESPS*LQFPLA
Trigger: TGCCAGAGGAAACTGCAACCAGCTCGGGGATTCGGA...ACTGTGTTTGAAGGAGGGGTGACCGACCTGTATTACATTCTCAAACACTCGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR TCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTGGTCGCAGTCCACCGTaGTGGATGAGTTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIGRSPP*WMSCGM
Trigger: CATACCACAACTCATCCATCACGGTGGACTGCGACC...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp ATGAGATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGGGTCGCAGTCCACCGTaGTGGATGAGTTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: MRSSKVNSKISLPSVHTLGRSPP*WMSCGM
Trigger: CATACCACAACTCATCCATCACGGTGGACTGCGACC...CAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGATCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR TCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTGCTTCCCGTGCTGGGTaGCCATGGTACACTGGTCGC +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVASRAG*PWYTGR
Trigger: GCGACCAGTGTACCATGGTCACCCAGCACGGGAAGC...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR TCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTTAGCCCCATCCTGGTaGTGTTTTTGGACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEALAPSW*CFWTAD
Trigger: ATCAGCTGTCCAAAAACATCACCAGGATGGGGCTAA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGTTAGCCCCATCCTGGTaGTGTTTTTGGACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWLAPSW*CFWTAD
Trigger: ATCAGCTGTCCAAAAACATCACCAGGATGGGGCTAA...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGGCAGTCTCGGGGACTaGGGTTGTAAGTTTTATGTC +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMEGSLGD*GCKFYV
Trigger: GACATAAAACTTACAACCTCAGTCCCCGAGACTGCC...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp GCTAGGATGCTTCTCGGGACTAACTCTCGGTATTGTCTAATGGTAAAGTGCCATGGCAGTCTCGGGGACTaGGGTTGTAAGTTTTATGTC +
Preference number: 4 (lower is better)
Translates to: ARMLLGTNSRYCLMVKCHGSLGD*GCKFYV
Trigger: GACATAAAACTTACAACCTCAGTCCCCGAGACTGCC...ATGGCACTTTACCATTAGACAATACCGAGAGTTAGTCCCGAGAAGCATCCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR TCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTGTTCCCCAGCGCGGGTaGATTGTTGAAGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFVPQRG*IVEVLL
Trigger: GAGGAGGACTTCAACAATTCACCCGCGCTGGGGAAC...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp CCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCTCTGATTTGGTCTCTTaGGTGGCGGGAGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: PLAASYCVFSNLVISLSSSDLVS*VAGGLL
Trigger: CAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGA...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCGGCCAACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR TCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAACATCCCTCCCAGGGTTaGGGCTGCAGTTCGGGATCG +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQEHPSQG*GCSSGS
Trigger: CGATCCCGAACTGCAGCCTCAACCCTGGGAGGGATG...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS-3UTR TCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGACACCATCACATCCTCTaGGGAGGACTGGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRHHHIL*GGLEVT
Trigger: AGTCACTTCCAGTCCTCCTCAGAGGATGTGATGGTG...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS-3UTR TCA 90 bp CATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGGGTTCTGGCATCTGCCGCTaGATGCACAATGTATCGCTT +
Preference number: 4 (lower is better)
Translates to: HQFLHWLQYYTQPEVVEGSGICR*MHNVSL
Trigger: AAGCGATACATTGTGCATTCAGCGGCAGATGCCAGA...ACCCTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR GCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGTCCTCTGTGCGAGACTaGAGTCTCTTGTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWSSVRD*SLLFIS
Trigger: TGAGATGAACAAGAGACTGCAGTCTCGCACAGAGGA...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTCATTGTTCCCAGCGCTaGTGTTGGAAGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIHCSQR*CWKCCW
Trigger: CCAGCAGCACTTCCAACAGCAGCGCTGGGAACAATG...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTCCTCCTCGTCGTCCATaGCGTTGGCCGCATCATATT +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIPPRRP*RWPHHI
Trigger: AATATGATGCGGCCAACGGCATGGACGACGAGGAGG...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGACGTTTGGTTGTTGGTTaGCTTGTGGGTTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRRLVVG*LVGSGG
Trigger: TCCGCCAGAACCCACAAGGCAACCAACAACCAAACG...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507464.5
CDS-3UTR CCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAATAGAAGGGGTCATGTaGTGTGCTGGACATCTTGCC +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMEIEGVM*CAGHLA
Trigger: GGCAAGATGTCCAGCACACCACATGACCCCTTCTAT...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp ACGGGCCTATTGACAGTGGATTCTGGTGCCGATCATCTTATTGGGAAGCCTGGGTGGCTGTACCATGTATaGTGTATGCCTCCTATAAAA +
Preference number: 4 (lower is better)
Translates to: TGLLTVDSGADHLIGKPGWLYHV*CMPPIK
Trigger: TTTTATAGGAGGCATACACCATACATGGTACAGCCA...CCCAGGCTTCCCAATAAGATGATCGGCACCAGAATCCACTGTCAATAGGCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTGTGACCATGGTACACTaGTCGCAGTCCACCGTGATG +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIVTMVH*SQSTVM
Trigger: CATCACGGTGGACTGCGACCAGTGTACCATGGTCAC...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CTCGGGACTAACTCTCGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCGTGACCATGGTACACTaGTCGCAGTCCACCGTGATG +
Preference number: 4 (lower is better)
Translates to: LGTNSRYCLMVKCHVLILVTMVH*SQSTVM
Trigger: CATCACGGTGGACTGCGACCAGTGTACCATGGTCAC...GAGAATCAAAACATGGCACTTTACCATTAGACAATACCGAGAGTTAGTCCCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTATGGGCTTCCCGTGCTaGGTGACCATGGTACACTGG +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFMGFPC*VTMVHW
Trigger: CCAGTGTACCATGGTCACCCAGCACGGGAAGCCCAT...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGGATCTTGTGCATGCATaGCTAGGATGCTTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: RHQFLHWLQYYTQPEVVEDLVHA*LGCFSG
Trigger: TCCCGAGAAGCATCCTAGCCATGCATGCACAAGATC...CTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTGTTGGTTGCCTTGTaGGTTCTGCTGGCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALELLVAL*VLLAEP
Trigger: TGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAA...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTTGTTGGTTGCCTTGTaGGTTCTGCTGGCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLILLVAL*VLLAEP
Trigger: TGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAA...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp TTGATTTCTACAGGAAATAAACATCGCCTCCTGATGTGTAACAACCACGCGAGTCGTCGTCCATGCCGTTaGCCGCATCATATTGCGTGT +
Preference number: 4 (lower is better)
Translates to: LISTGNKHRLLMCNNHASRRPCR*PHHIAC
Trigger: ACACGCAATATGATGCGGCCAACGGCATGGACGACG...ACTCGCGTGGTTGTTACACATCAGGAGGCGATGTTTATTTCCTGTAGAAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR CCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGCGTCGTCCATGCCGTTaGCCGCATCATATTGCGTGT +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALERRPCR*PHHIAC
Trigger: ACACGCAATATGATGCGGCCAACGGCATGGACGACG...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTATTTGGTCTCTTGAGTaGCGGGAGGTTTACTGTTCC +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAIWSLE*REVYCS
Trigger: GGAACAGTAAACCTCCCGCCACTCAAGAGACCAAAT...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGCATAAATTACCTTGCTaGGCCCTCTTAGCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWHKLPC*ALLAVA
Trigger: GGCAACAGCTAAGAGGGCCCAGCAAGGTAATTTATG...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTTGCCTTGTGGGTTCTaGCGGAGCCACCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFLPCGF*RSHHPL
Trigger: CAGAGGATGGTGGCTCCGCCAGAACCCACAAGGCAA...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507464.5
CDS-3UTR TCA 90 bp CATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGGGTTTAGCCCCATCCTGGTaGTGTTTTTGGACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: HQFLHWLQYYTQPEVVEGLAPSW*CFWTAD
Trigger: ATCAGCTGTCCAAAAACATCACCAGGATGGGGCTAA...ACCCTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR TCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAGGCAGTCTCGGGGACTaGGGTTGTAAGTTTTATGTC +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRGSLGD*GCKFYV
Trigger: GACATAAAACTTACAACCTCAGTCCCCGAGACTGCC...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAATCACATCAGGTACCTaGCTGGACAGACTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMEITSGT*LDRLRF
Trigger: AAACCTGAGTCTGTCCAGTCAGGTACCTGATGTGAT...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304523.10
ENST00000507464.5
CDS-3UTR TCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGATCTGATTTGGTCTCTTaGGTGGCGGGAGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRSDLVS*VAGGLL
Trigger: CAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGA...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGTATCTGTATTACCTGTaGAGGCCTCCAAGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWYLYYL*RPPRKG
Trigger: ACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATA...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGGTCACTGCTGTTGAATaGCACAGGTCTCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEVTAVE*HRSPSL
Trigger: GAGGGATGGAGACCTGTGTCATTCAACAGCAGTGAC...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS-3UTR TCA 90 bp AAACAAGCAGGTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTCTAGCAATAGGTACCTaGCTGGACAGACTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: KQAGLQAVSGTEVVSFMSLAIGT*LDRLRF
Trigger: AAACCTGAGTCTGTCCAGTCAGGTACCTATTGCTAG...AGACATAAAACTTACAACCTCAGTCCCCGAGACTGCCTGAAGACCTGCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR GCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGAGGGGTCATGTGGTGTaGTGGACATCTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALERGHVV*WTSCLL
Trigger: AAGCAGGCAAGATGTCCAGCACACCACATGACCCCT...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTAGGGGTCATGTGGTGTaGTGGACATCTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIRGHVV*WTSCLL
Trigger: AAGCAGGCAAGATGTCCAGCACACCACATGACCCCT...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp GGTTGTAAGTTTTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACAACATGGGCTTCCCGTaGTGGGTGACCATGGTACAC +
Preference number: 4 (lower is better)
Translates to: GCKFYVSTSVPALAPILHNMGFP*WVTMVH
Trigger: GTGTACCATGGTCACCCAGCACGGGAAGCCCATGTT...GTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACTTACAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTAACATGGGCTTCCCGTaGTGGGTGACCATGGTACAC +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFNMGFP*WVTMVH
Trigger: GTGTACCATGGTCACCCAGCACGGGAAGCCCATGTT...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTACTCCAAGATCAGTCTaGCTTCTGTACATACCTTGG +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEATPRSV*LLYIPW
Trigger: CCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGT...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp TTTCGAGTGTTTGAGAATGTAATACAGGTCGGTCACCCCTCCTTCAAACACAGTCATGCATGGCTAGGATaGTTCTCGGGACTAACTCTC +
Preference number: 4 (lower is better)
Translates to: FRVFENVIQVGHPSFKHSHAWLG*FSGLTL
Trigger: GAGAGTTAGTCCCGAGAAGCATCCTAGCCATGCATG...ACTGTGTTTGAAGGAGGGGTGACCGACCTGTATTACATTCTCAAACACTCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp TTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGCATGCATGGCTAGGATaGTTCTCGGGACTAACTCTC +
Preference number: 4 (lower is better)
Translates to: LCLDISSCIGSNITHNLRHAWLG*FSGLTL
Trigger: GAGAGTTAGTCCCGAGAAGCATCCTAGCCATGCATG...CCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp TTTCTGATTTGGTCTCTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTCTCGACATCAGTTCCTaGATTGGCTCCAATATTACA +
Preference number: 4 (lower is better)
Translates to: FLIWSLEWREVYCSTGCCLDISS*IGSNIT
Trigger: TGTAATATTGGAGCCAATGCAGGAACTGATGTCGAG...ACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp TTGATTTCTACAGGAAATAAACATCGCCTCCTGATGTGTAACAACCACGCGAGTCGTTTGGTTGTTGGTTaGCTTGTGGGTTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LISTGNKHRLLMCNNHASRLVVG*LVGSAG
Trigger: GCCAGCAGAACCCACAAGGCAACCAACAACCAAACG...ACTCGCGTGGTTGTTACACATCAGGAGGCGATGTTTATTTCCTGTAGAAATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR GCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGACGCTGCTGTTGGAAGTaGTGCTGGTGGAATTTTTCC +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRRCCWK*CWWNFS
Trigger: GGAAAAATTCCACCAGCAGCACTTCCAACAGCAGCG...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTGCTGCCAGTGCTGTTTaGATTGTTCCCAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFAASAV*IVPSAA
Trigger: AGCAGCGCTGGGAACAATGCAAACAGCACTGGCAGC...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAATCTTCTTGCTGCCAGTaGTGTTTGCATTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMESSCCQ*CLHCSQ
Trigger: CTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGA...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAACCGTGCCAGAAGATaGGCTAGAGTTTTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWNRARR*ARVFSH
Trigger: ATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTT...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp TTTCTGATTTGGTCTCTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTGGCCCTCTTAGCTGTTaGCCAATGAAAGAAAACATA +
Preference number: 4 (lower is better)
Translates to: FLIWSLEWREVYCSTGCCGPLSC*PMKENI
Trigger: TATGTTTTCTTTCATTGGGCAACAGCTAAGAGGGCC...ACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp ACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAGGCCCTCTTAGCTGTTaGCCAATGAAAGAAAACATA +
Preference number: 4 (lower is better)
Translates to: TTGSSLNVGGRDAYLISTGPLSC*PMKENI
Trigger: TATGTTTTCTTTCATTGGGCAACAGCTAAGAGGGCC...TGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR GCA 90 bp TTTCTGATTTGGTCTCTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTAACCATAAATTACCTTaGTGGGCCCTCTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: FLIWSLEWREVYCSTGCCNHKLP*WALLAV
Trigger: AACAGCTAAGAGGGCCCAGCAAGGTAATTTATGGTT...ACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGCACACGGAGCCACTGTaGCTTTACATGTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEHTEPL*LYMCGG
Trigger: TCCTCCACACATGTAAAGGCACAGTGGCTCCGTGTG...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CTGTACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTGGCTGTACCATGTATaGTGTATGCCTCCTATAAAA +
Preference number: 4 (lower is better)
Translates to: LYNGVKSQCRGPRRIFDFWLYHV*CMPPIK
Trigger: TTTTATAGGAGGCATACACCATACATGGTACAGCCA...GAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTGTGACCATGGTACACTaGTCGCAGTCCACCGTGATG +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFVTMVH*SQSTVM
Trigger: CATCACGGTGGACTGCGACCAGTGTACCATGGTCAC...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAGATCTTGTGCATGCATaGCTAGGATGCTTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRDLVHA*LGCFSG
Trigger: TCCCGAGAAGCATCCTAGCCATGCATGCACAAGATC...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTCCTTGTGGGTTCTGCTaGCGGAGCCACCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVPCGFC*RSHHPL
Trigger: CAGAGGATGGTGGCTCCGCCAGCAGAACCCACAAGG...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAACCTTGTGGGTTCTGCTaGCGGAGCCACCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQEPCGFC*RSHHPL
Trigger: CAGAGGATGGTGGCTCCGCCAGCAGAACCCACAAGG...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGATCTCCGTTTGGTTGTTaGTTGCCTTGTGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRSPFGC*LPCGFC
Trigger: GCAGAACCCACAAGGCAACCAACAACCAAACGGAGA...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGTCCTTTTTCTCCGTTTaGTTGTTGGTTGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWSFFSV*LLVALW
Trigger: CCACAAGGCAACCAACAACCAAACGGAGAAAAAGGA...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTCCTTTTTCTCCGTTTaGTTGTTGGTTGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEASFFSV*LLVALW
Trigger: CCACAAGGCAACCAACAACCAAACGGAGAAAAAGGA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGGGGGGTTTTCTGATTTaGTCTCTTGAGTGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEGGFLI*SLEWRE
Trigger: CTCCCGCCACTCAAGAGACCAAATCAGAAAACCCCC...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAACATAAATTACCTTGCTaGGCCCTCTTAGCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMEHKLPC*ALLAVA
Trigger: GGCAACAGCTAAGAGGGCCCAGCAAGGTAATTTATG...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCTGCTTCTCCTTAAATTaGCCAGAAGGGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: PLAASYCVFSNLVISLSSCFSLN*PEGVTA
Trigger: AGCAGTGACCCCTTCTGGCCAATTTAAGGAGAAGCA...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCGGCCAACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS-3UTR CCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTTGTTGGTTGCCTTGTaGGTTCTGGCGGAGCCACCA +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFLLVAL*VLAEPP
Trigger: TGGTGGCTCCGCCAGAACCCACAAGGCAACCAACAA...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507464.5
CDS-3UTR CCA 90 bp AGTTTTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTTCCATCACAGGCATCTaGTTCCGAATCCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: SFMSRHQFLHWLQYYTQPSITGI*FRIPEL
Trigger: CAGCTCGGGGATTCGGAACCAGATGCCTGTGATGGA...AGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR TCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGACTCTTTCGAGTGTTTaGGAATGTAATACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWTLSSV*ECNTGR
Trigger: CCGACCTGTATTACATTCTCAAACACTCGAAAGAGT...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGATTAGCCCCATCCTGGTaGTGTTTTTGGACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRLAPSW*CFWTAD
Trigger: ATCAGCTGTCCAAAAACATCACCAGGATGGGGCTAA...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTGGCAGTCTCGGGGACTaGGGTTGTAAGTTTTATGTC +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIGSLGD*GCKFYV
Trigger: GACATAAAACTTACAACCTCAGTCCCCGAGACTGCC...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAATCACATCAGGTACCTaGCTGGACAGACTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRITSGT*LDRLRF
Trigger: AAACCTGAGTCTGTCCAGTCAGGTACCTGATGTGAT...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304523.10
ENST00000507464.5
CDS-3UTR TCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTGCGCGGGTGAATTGTTaGAGTCCTCCTCGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVARVNC*SPPRRP
Trigger: TGGACGACGAGGAGGACTTCAACAATTCACCCGCGC...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR TCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTGTTCCCCAGCGCGGGTaGATTGTTGAAGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVVPQRG*IVEVLL
Trigger: GAGGAGGACTTCAACAATTCACCCGCGCTGGGGAAC...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR TCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAATATCTGTATTACCTGTaGAGGCCTCCAAGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMEYLYYL*RPPRKG
Trigger: ACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATA...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp CCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCGCACTTGGGCTAAATTaGGTCGACTCAAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: PLAASYCVFSNLVISLSSALGLN*VDSRQE
Trigger: TTCTTGTCTTGAGTCGACTCAATTTAGCCCAAGTGC...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCGGCCAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR TCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCACTTGGGCTAAATTaGGTCGACTCAAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMEALGLN*VDSRQE
Trigger: TTCTTGTCTTGAGTCGACTCAATTTAGCCCAAGTGC...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR TCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTAGGGGTCACTGCTGTTaGATGACACAGGTCTCCATC +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFRGHCC*MTQVSI
Trigger: GATGGAGACCTGTGTCATTCAACAGCAGTGACCCCT...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS-3UTR GCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTGCTGGACATCTTGCCTaGTTTTCGAAAATCAAGCTA +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAAGHLA*FSKIKL
Trigger: TAGCTTGATTTTCGAAAAGCAGGCAAGATGTCCAGC...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGGCTGGACATCTTGCCTaGTTTTCGAAAATCAAGCTA +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWAGHLA*FSKIKL
Trigger: TAGCTTGATTTTCGAAAAGCAGGCAAGATGTCCAGC...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTGTGTGCTGGACATCTTaGCTGCTTTTCGAAAATCAA +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAVCWTS*LLFENQ
Trigger: TTGATTTTCGAAAAGCAGGCAAGATGTCCAGCACAC...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp AGTTTTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTAGGGGTCATGTGGTGTaGTGGACATCTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SFMSRHQFLHWLQYYTQPRGHVV*WTSCLL
Trigger: AAGCAGGCAAGATGTCCAGCACACCACATGACCCCT...AGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGATCCTCTGTGCGAGACTaGAGTCTCTTGTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRSSVRD*SLLFIS
Trigger: TGAGATGAACAAGAGACTGCAGTCTCGCACAGAGGA...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGAAGCTCAGCTTAAAATCCTCTGTGCGAGACTaGAGTCTCTTGTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: QQLTLLQGNLGREKLSLKSSVRD*SLLFIS
Trigger: TGAGATGAACAAGAGACTGCAGTCTCGCACAGAGGA...TTTTAAGCTGAGCTTCTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR GCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAACTCCAAGATCAGTCTaGCTTCTGTACATACCTTGG +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMETPRSV*LLYIPW
Trigger: CCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGT...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp TCGTGTACTGTACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGTCTAATGGTAAAGTaGCATGTTTTGATTCTCATG +
Preference number: 4 (lower is better)
Translates to: SCTVQRGQVSMSGAETHICLMVK*HVLILM
Trigger: CATGAGAATCAAAACATGGCACTTTACCATTAGACA...AATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGTACAGTACACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR GCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAATTGCCTTGTGGGTTCTaGTGGCGGAGCCACCATCCT +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQELPCGF*WRSHHP
Trigger: AGGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAA...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp ATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGGTAAACGTTTGGTTGTTGGTTaGCTTGTGGGTTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: IIKGELQDQSAFCTYLGKRLVVG*LVGSAG
Trigger: GCCAGCAGAACCCACAAGGCAACCAACAACCAAACG...TTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR GCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGCGCTGCTGTTGGAAGTaGTGCTGGTGGAATTTTTCC +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALERCCWK*CWWNFS
Trigger: GGAAAAATTCCACCAGCAGCACTTCCAACAGCAGCG...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTGGCCCTCTTAGCTGTTaGCCAATGAAAGAAAACATA +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAGPLSC*PMKENI
Trigger: TATGTTTTCTTTCATTGGGCAACAGCTAAGAGGGCC...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTAACCATAAATTACCTTaGTGGGCCCTCTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEANHKLP*WALLAV
Trigger: AACAGCTAAGAGGGCCCAGCAAGGTAATTTATGGTT...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTCACACGGAGCCACTGTaGCTTTACATGTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFHTEPL*LYMCGG
Trigger: TCCTCCACACATGTAAAGGCACAGTGGCTCCGTGTG...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CTCGGGACTAACTCTCGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCGGTCATGTGGTGTGCTaGACATCTTGCCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LGTNSRYCLMVKCHVLILGHVVC*TSCLLF
Trigger: GAAAAGCAGGCAAGATGTCCAGCACACCACATGACC...GAGAATCAAAACATGGCACTTTACCATTAGACAATACCGAGAGTTAGTCCCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGATAGAAGGGGTCATGTaGTGTGCTGGACATCTTGCC +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEIEGVM*CAGHLA
Trigger: GGCAAGATGTCCAGCACACCACATGACCCCTTCTAT...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CTCGGGACTAACTCTCGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCATAGAAGGGGTCATGTaGTGTGCTGGACATCTTGCC +
Preference number: 4 (lower is better)
Translates to: LGTNSRYCLMVKCHVLILIEGVM*CAGHLA
Trigger: GGCAAGATGTCCAGCACACCACATGACCCCTTCTAT...GAGAATCAAAACATGGCACTTTACCATTAGACAATACCGAGAGTTAGTCCCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp GCAGGTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTCGACATATGCCTCCTATAAAATaGGCCGAAAGGAGAAGAATA +
Preference number: 4 (lower is better)
Translates to: AGLQAVSGTEVVSFMSRHMPPIK*AERRRI
Trigger: TATTCTTCTCCTTTCGGCCCATTTTATAGGAGGCAT...ATGTCGAGACATAAAACTTACAACCTCAGTCCCCGAGACTGCCTGAAGACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGATAGATTCGGTACTCTaGCTGTACCATGTATGGTGT +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWIDSVL*LYHVWC
Trigger: ACACCATACATGGTACAGCCAGAGTACCGAATCTAT...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGGTGATGGATGAGTTGTaGTATGACTCTTTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWVMDEL*YDSFEC
Trigger: ACACTCGAAAGAGTCATACCACAACTCATCCATCAC...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTGTGATGGATGAGTTGTaGTATGACTCTTTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAVMDEL*YDSFEC
Trigger: ACACTCGAAAGAGTCATACCACAACTCATCCATCAC...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp TTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGGTGAACCTTGTGGGTTCTGCTaGCGGAGCCACCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSNGKVPCFDSHEIIKGEPCGFC*RSHHPL
Trigger: CAGAGGATGGTGGCTCCGCCAGCAGAACCCACAAGG...TTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTCTCCGTTTGGTTGTTaGTTGCCTTGTGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALESPFGC*LPCGFC
Trigger: GCAGAACCCACAAGGCAACCAACAACCAAACGGAGA...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAATCCTTTTTCTCCGTTTaGTTGTTGGTTGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMESFFSV*LLVALW
Trigger: CCACAAGGCAACCAACAACCAAACGGAGAAAAAGGA...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTCAGGTTTGCAGCTGTaGTCTTCTTCTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLISGLQL*SSSCCQ
Trigger: CTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGA...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAATTTGGTCTCTTGAGTaGCGGGAGGTTTACTGTTCC +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRIWSLE*REVYCS
Trigger: GGAACAGTAAACCTCCCGCCACTCAAGAGACCAAAT...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGAAGCTCAGCTTAAAAATTTGGTCTCTTGAGTaGCGGGAGGTTTACTGTTCC +
Preference number: 4 (lower is better)
Translates to: QQLTLLQGNLGREKLSLKIWSLE*REVYCS
Trigger: GGAACAGTAAACCTCCCGCCACTCAAGAGACCAAAT...TTTTAAGCTGAGCTTCTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR CCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTATTGACAGTGGATTCTaGTGCCGATCATCTTATTGG +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAIDSGF*CRSSYW
Trigger: CCAATAAGATGATCGGCACCAGAATCCACTGTCAAT...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGTCTTGTTTCAGCACTTaGGCTAAATTGAGTCGACTC +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWSCFST*AKLSRL
Trigger: GAGTCGACTCAATTTAGCCCAAGTGCTGAAACAAGA...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTCTTGTTTCAGCACTTaGGCTAAATTGAGTCGACTC +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEASCFST*AKLSRL
Trigger: GAGTCGACTCAATTTAGCCCAAGTGCTGAAACAAGA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAGGGTGCCTTTACATGTGTaGAGGAACATATTAATATGC +
Preference number: 4 (lower is better)
Translates to: NGVKSQCRGPRRIFDFYRVPLHV*RNILIC
Trigger: GCATATTAATATGTTCCTCCACACATGTAAAGGCAC...CCTGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR CCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTCTCCGTTTGGTTGTTaGTTGCCTTGTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLISPFGC*LPCGFW
Trigger: CCAGAACCCACAAGGCAACCAACAACCAAACGGAGA...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507464.5
CDS-3UTR CCA 90 bp AAGTTTTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCGGTTGCAGTTTCCTCTaGCATCTGCCGCTGAATGCA +
Preference number: 4 (lower is better)
Translates to: KFYVSTSVPALAPILHTTGCSFL*HLPLNA
Trigger: TGCATTCAGCGGCAGATGCCAGAGGAAACTGCAACC...GGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR TCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAGGTCGCAGTCCACCGTaGTGGATGAGTTGTGGTATG +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQEGRSPP*WMSCGM
Trigger: CATACCACAACTCATCCATCACGGTGGACTGCGACC...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTAGCCCCATCCTGGTaGTGTTTTTGGACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALELAPSW*CFWTAD
Trigger: ATCAGCTGTCCAAAAACATCACCAGGATGGGGCTAA...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp CTCGGGACTAACTCTCGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCTTAGCCCCATCCTGGTaGTGTTTTTGGACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LGTNSRYCLMVKCHVLILLAPSW*CFWTAD
Trigger: ATCAGCTGTCCAAAAACATCACCAGGATGGGGCTAA...GAGAATCAAAACATGGCACTTTACCATTAGACAATACCGAGAGTTAGTCCCGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR TCA 90 bp CAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGAAGCTCAGCTTAAAATATCTGTATTACCTGTaGAGGCCTCCAAGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: QQLTLLQGNLGREKLSLKYLYYL*RPPRKG
Trigger: ACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATA...TTTTAAGCTGAGCTTCTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR GCA 90 bp CATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGGGTGCTGGACATCTTGCCTaGTTTTCGAAAATCAAGCTA +
Preference number: 4 (lower is better)
Translates to: HQFLHWLQYYTQPEVVEGAGHLA*FSKIKL
Trigger: TAGCTTGATTTTCGAAAAGCAGGCAAGATGTCCAGC...ACCCTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp CCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCGTGTGCTGGACATCTTaGCTGCTTTTCGAAAATCAA +
Preference number: 4 (lower is better)
Translates to: PLAASYCVFSNLVISLSSVCWTS*LLFENQ
Trigger: TTGATTTTCGAAAAGCAGGCAAGATGTCCAGCACAC...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCGGCCAACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp ATGAGATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGTCCTCTGTGCGAGACTaGAGTCTCTTGTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: MRSSKVNSKISLPSVHTLSSVRD*SLLFIS
Trigger: TGAGATGAACAAGAGACTGCAGTCTCGCACAGAGGA...CAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGATCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTGTCACTATCCTCTGTaGGAGACTGCAGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLICHYPL*ETAVSC
Trigger: ACAAGAGACTGCAGTCTCGCACAGAGGATAGTGACA...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTGTCACTATCCTCTGTaGGAGACTGCAGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALECHYPL*ETAVSC
Trigger: ACAAGAGACTGCAGTCTCGCACAGAGGATAGTGACA...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp TCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGGTGAACTCAACATGGGCTTCCCGTaGTGGGTGACCATGGTACAC +
Preference number: 4 (lower is better)
Translates to: SNGKVPCFDSHEIIKGELNMGFP*WVTMVH
Trigger: GTGTACCATGGTCACCCAGCACGGGAAGCCCATGTT...GAGTTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTCATGCATGGCTAGGATaGTTCTCGGGACTAACTCTC +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFHAWLG*FSGLTL
Trigger: GAGAGTTAGTCCCGAGAAGCATCCTAGCCATGCATG...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCCTCGACATCAGTTCCTaGATTGGCTCCAATATTACA +
Preference number: 4 (lower is better)
Translates to: PLAASYCVFSNLVISLSSLDISS*IGSNIT
Trigger: TGTAATATTGGAGCCAATGCAGGAACTGATGTCGAG...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCGGCCAACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAACTCGACATCAGTTCCTaGATTGGCTCCAATATTACA +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMELDISS*IGSNIT
Trigger: TGTAATATTGGAGCCAATGCAGGAACTGATGTCGAG...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTCTTCTTGCTGCCAGTaGTGTTTGCATTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLISSCCQ*CLHCSQ
Trigger: CTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGA...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp ATGAGATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGTCTTCTTGCTGCCAGTaGTGTTTGCATTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: MRSSKVNSKISLPSVHTLSSCCQ*CLHCSQ
Trigger: CTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGA...CAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGATCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR GCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTCCTCCTCGTCGTCCATaGCGTTGGCCGCATCATATT +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVPPRRP*RWPHHI
Trigger: AATATGATGCGGCCAACGGCATGGACGACGAGGAGG...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGGCCCTCTTAGCTGTTaGCCAATGAAAGAAAACATA +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMEGPLSC*PMKENI
Trigger: TATGTTTTCTTTCATTGGGCAACAGCTAAGAGGGCC...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAAACCATAAATTACCTTaGTGGGCCCTCTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMENHKLP*WALLAV
Trigger: AACAGCTAAGAGGGCCCAGCAAGGTAATTTATGGTT...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGATGCCTCCTATAAAATaGGCCGAAAGGAGAAGAATA +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWMPPIK*AERRRI
Trigger: TATTCTTCTCCTTTCGGCCCATTTTATAGGAGGCAT...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGTGGCTGTACCATGTATaGTGTATGCCTCCTATAAAA +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWWLYHV*CMPPIK
Trigger: TTTTATAGGAGGCATACACCATACATGGTACAGCCA...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCATAGATTCGGTACTCTaGCTGTACCATGTATGGTGT +
Preference number: 4 (lower is better)
Translates to: PLAASYCVFSNLVISLSSIDSVL*LYHVWC
Trigger: ACACCATACATGGTACAGCCAGAGTACCGAATCTAT...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCGGCCAACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CCA 90 bp GCTAGGATGCTTCTCGGGACTAACTCTCGGTATTGTCTAATGGTAAAGTGCCATATAGATTCGGTACTCTaGCTGTACCATGTATGGTGT +
Preference number: 4 (lower is better)
Translates to: ARMLLGTNSRYCLMVKCHIDSVL*LYHVWC
Trigger: ACACCATACATGGTACAGCCAGAGTACCGAATCTAT...ATGGCACTTTACCATTAGACAATACCGAGAGTTAGTCCCGAGAAGCATCCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAGTGACCATGGTACACTaGTCGCAGTCCACCGTGATG +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQEVTMVH*SQSTVM
Trigger: CATCACGGTGGACTGCGACCAGTGTACCATGGTCAC...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp TTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGGTGAAATGGGCTTCCCGTGCTaGGTGACCATGGTACACTGG +
Preference number: 4 (lower is better)
Translates to: LSNGKVPCFDSHEIIKGEMGFPC*VTMVHW
Trigger: CCAGTGTACCATGGTCACCCAGCACGGGAAGCCCAT...TTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTGATCTTGTGCATGCATaGCTAGGATGCTTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFDLVHA*LGCFSG
Trigger: TCCCGAGAAGCATCCTAGCCATGCATGCACAAGATC...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTTCCCAGCGCTGCTGTTaGAAGTGCTGCTGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVSQRCC*KCCWWN
Trigger: ATTCCACCAGCAGCACTTCCAACAGCAGCGCTGGGA...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAACGTCGTCCATGCCGTTaGCCGCATCATATTGCGTGT +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQERRPCR*PHHIAC
Trigger: ACACGCAATATGATGCGGCCAACGGCATGGACGACG...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGAGAAGCTCAGCTTAAAATAACAGTGGGAGGAGTCGGGGAATCTAGGACAGACAGCACTGAGCATTTATaGACAATATGGCCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: REAQLKITVGGVGESRTDSTEHL*TIWPSF
Trigger: AAACGAAGGCCATATTGTCCATAAATGCTCAGTGCT...GTCTGTCCTAGATTCCCCGACTCCTCCCACTGTTATTTTAAGCTGAGCTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR CCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAGCACTGAGCATTTATaGACAATATGGCCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWSTEHL*TIWPSF
Trigger: AAACGAAGGCCATATTGTCCATAAATGCTCAGTGCT...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTCATAAATTACCTTGCTaGGCCCTCTTAGCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIHKLPC*ALLAVA
Trigger: GGCAACAGCTAAGAGGGCCCAGCAAGGTAATTTATG...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp TTGATTTCTACAGGAAATAAACATCGCCTCCTGATGTGTAACAACCACGCGAGTCATAAATTACCTTGCTaGGCCCTCTTAGCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: LISTGNKHRLLMCNNHASHKLPC*ALLAVA
Trigger: GGCAACAGCTAAGAGGGCCCAGCAAGGTAATTTATG...ACTCGCGTGGTTGTTACACATCAGGAGGCGATGTTTATTTCCTGTAGAAATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR TCA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTAAGACAAGAACCAATTaGCATCAGCTCAACCATAAA +
Preference number: 4 (lower is better)
Translates to: SASICITCEGLQERVMEAKTRTN*HQLNHK
Trigger: TTTATGGTTGAGCTGATGTCAATTGGTTCTTGTCTT...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR TCA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGACAAGAACCAATTaGCATCAGCTCAACCATAAA +
Preference number: 4 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWKTRTN*HQLNHK
Trigger: TTTATGGTTGAGCTGATGTCAATTGGTTCTTGTCTT...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR TCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTGCACTTGGGCTAAATTaGGTCGACTCAAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIALGLN*VDSRQE
Trigger: TTCTTGTCTTGAGTCGACTCAATTTAGCCCAAGTGC...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp TTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGGCTGGACATCTTGCCTaGTTTTCGAAAATCAAGCTA +
Preference number: 4 (lower is better)
Translates to: LCLDISSCIGSNITHNLRAGHLA*FSKIKL
Trigger: TAGCTTGATTTTCGAAAAGCAGGCAAGATGTCCAGC...CCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp GAGATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGGTGTGTGCTGGACATCTTaGCTGCTTTTCGAAAATCAA +
Preference number: 4 (lower is better)
Translates to: EIIKGELQDQSAFCTYLGVCWTS*LLFENQ
Trigger: TTGATTTTCGAAAAGCAGGCAAGATGTCCAGCACAC...ACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGGTCATGTGGTGTaGTGGACATCTTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQERGHVV*WTSCLL
Trigger: AAGCAGGCAAGATGTCCAGCACACCACATGACCCCT...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp ATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGGTAAATGTCACTATCCTCTGTaGGAGACTGCAGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: IIKGELQDQSAFCTYLGKCHYPL*ETAVSC
Trigger: ACAAGAGACTGCAGTCTCGCACAGAGGATAGTGACA...TTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp ATGAGATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGACTCCAAGATCAGTCTaGCTTCTGTACATACCTTGG +
Preference number: 4 (lower is better)
Translates to: MRSSKVNSKISLPSVHTLTPRSV*LLYIPW
Trigger: CCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGT...CAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGATCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp GCAGGTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTCGACATTGTCTAATGGTAAAGTaGCATGTTTTGATTCTCATG +
Preference number: 4 (lower is better)
Translates to: AGLQAVSGTEVVSFMSRHCLMVK*HVLILM
Trigger: CATGAGAATCAAAACATGGCACTTTACCATTAGACA...ATGTCGAGACATAAAACTTACAACCTCAGTCCCCGAGACTGCCTGAAGACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAACGTTTGGTTGTTGGTTaGCTTGTGGGTTCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQERLVVG*LVGSAG
Trigger: GCCAGCAGAACCCACAAGGCAACCAACAACCAAACG...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTTCTTGCTGCCAGTaGTGTTTGCATTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFSSCCQ*CLHCSQ
Trigger: CTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGA...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCTTGGCCGCATCATATTaGGTGTTTTCTAATCTAGTG +
Preference number: 4 (lower is better)
Translates to: PLAASYCVFSNLVISLSSLAASY*VFSNLV
Trigger: CACTAGATTAGAAAACACGCAATATGATGCGGCCAA...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCGGCCAACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR GCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAGGCCCTCTTAGCTGTTaGCCAATGAAAGAAAACATA +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRGPLSC*PMKENI
Trigger: TATGTTTTCTTTCATTGGGCAACAGCTAAGAGGGCC...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAAACCATAAATTACCTTaGTGGGCCCTCTTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRNHKLP*WALLAV
Trigger: AACAGCTAAGAGGGCCCAGCAAGGTAATTTATGGTT...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTCACACGGAGCCACTGTaGCTTTACATGTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVHTEPL*LYMCGG
Trigger: TCCTCCACACATGTAAAGGCACAGTGGCTCCGTGTG...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAATAGATTCGGTACTCTaGCTGTACCATGTATGGTGT +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRIDSVL*LYHVWC
Trigger: ACACCATACATGGTACAGCCAGAGTACCGAATCTAT...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGAAGCTCAGCTTAAAAATAGATTCGGTACTCTaGCTGTACCATGTATGGTGT +
Preference number: 4 (lower is better)
Translates to: QQLTLLQGNLGREKLSLKIDSVL*LYHVWC
Trigger: ACACCATACATGGTACAGCCAGAGTACCGAATCTAT...TTTTAAGCTGAGCTTCTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CCA 90 bp TTTCGAGTGTTTGAGAATGTAATACAGGTCGGTCACCCCTCCTTCAAACACAGTATAGATTCGGTACTCTaGCTGTACCATGTATGGTGT +
Preference number: 4 (lower is better)
Translates to: FRVFENVIQVGHPSFKHSIDSVL*LYHVWC
Trigger: ACACCATACATGGTACAGCCAGAGTACCGAATCTAT...ACTGTGTTTGAAGGAGGGGTGACCGACCTGTATTACATTCTCAAACACTCGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAGTGATGGATGAGTTGTaGTATGACTCTTTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRVMDEL*YDSFEC
Trigger: ACACTCGAAAGAGTCATACCACAACTCATCCATCAC...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp TTGATTTCTACAGGAAATAAACATCGCCTCCTGATGTGTAACAACCACGCGAGTTCCTTTTTCTCCGTTTaGTTGTTGGTTGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LISTGNKHRLLMCNNHASSFFSV*LLVALW
Trigger: CCACAAGGCAACCAACAACCAAACGGAGAAAAAGGA...ACTCGCGTGGTTGTTACACATCAGGAGGCGATGTTTATTTCCTGTAGAAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTCCTTTTTCTCCGTTTaGTTGTTGGTTGCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALESFFSV*LLVALW
Trigger: CCACAAGGCAACCAACAACCAAACGGAGAAAAAGGA...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAATCCAAGAAAGGGTCATaGAAGCTTACTGGGAATAAT +
Preference number: 4 (lower is better)
Translates to: ISASICITCEGLQERVMESKKGS*KLTGNN
Trigger: ATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGA...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGATCTTGTTTCAGCACTTaGGCTAAATTGAGTCGACTC +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRSCFST*AKLSRL
Trigger: GAGTCGACTCAATTTAGCCCAAGTGCTGAAACAAGA...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR TCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAGGCAGTCTCGGGGACTaGGGTTGTAAGTTTTATGTC +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQEGSLGD*GCKFYV
Trigger: GACATAAAACTTACAACCTCAGTCCCCGAGACTGCC...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTTCTGATTTGGTCTCTTaGGTGGCGGGAGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVSDLVS*VAGGLL
Trigger: CAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGA...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTGTGTGCTGGACATCTTaGCTGCTTTTCGAAAATCAA +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIVCWTS*LLFENQ
Trigger: TTGATTTTCGAAAAGCAGGCAAGATGTCCAGCACAC...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp GGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGGTGAACTCCAAGATTGTCACTATCCTCTGTaGGAGACTGCAGTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GKVPCFDSHEIIKGELQDCHYPL*ETAVSC
Trigger: ACAAGAGACTGCAGTCTCGCACAGAGGATAGTGACA...ATCTTGGAGTTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp ATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGGTAAAACTCCAAGATCAGTCTaGCTTCTGTACATACCTTGG +
Preference number: 4 (lower is better)
Translates to: IIKGELQDQSAFCTYLGKTPRSV*LLYIPW
Trigger: CCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGT...TTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAACATGCATGGCTAGGATaGTTCTCGGGACTAACTCTC +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQEHAWLG*FSGLTL
Trigger: GAGAGTTAGTCCCGAGAAGCATCCTAGCCATGCATG...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTCTCGACATCAGTTCCTaGATTGGCTCCAATATTACA +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLILDISS*IGSNIT
Trigger: TGTAATATTGGAGCCAATGCAGGAACTGATGTCGAG...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CCATGTTTTGATTCTCATGAGATCATCAAAGGTGAACTCCAAGATCAGTCTGCCCTCGACATCAGTTCCTaGATTGGCTCCAATATTACA +
Preference number: 4 (lower is better)
Translates to: PCFDSHEIIKGELQDQSALDISS*IGSNIT
Trigger: TGTAATATTGGAGCCAATGCAGGAACTGATGTCGAG...GGCAGACTGATCTTGGAGTTCACCTTTGATGATCTCATGAGAATCAAAACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp CGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGCGCTGCTGTTGGAAGTaGTGCTGGTGGAATTTTTCC +
Preference number: 4 (lower is better)
Translates to: RYCLMVKCHVLILMRSSKRCCWK*CWWNFS
Trigger: GGAAAAATTCCACCAGCAGCACTTCCAACAGCAGCG...CTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAATACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR GCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGATTGGCCGCATCATATTaGGTGTTTTCTAATCTAGTG +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRLAASY*VFSNLV
Trigger: CACTAGATTAGAAAACACGCAATATGATGCGGCCAA...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTAACCGTGCCAGAAGATaGGCTAGAGTTTTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFNRARR*ARVFSH
Trigger: ATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTT...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTGGTCATGTGGTGTGCTaGACATCTTGCCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVGHVVC*TSCLLF
Trigger: GAAAAGCAGGCAAGATGTCCAGCACACCACATGACC...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAGGTCATGTGGTGTGCTaGACATCTTGCCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQEGHVVC*TSCLLF
Trigger: GAAAAGCAGGCAAGATGTCCAGCACACCACATGACC...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTATAGAAGGGGTCATGTaGTGTGCTGGACATCTTGCC +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVIEGVM*CAGHLA
Trigger: GGCAAGATGTCCAGCACACCACATGACCCCTTCTAT...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAATGCCTCCTATAAAATaGGCCGAAAGGAGAAGAATA +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRMPPIK*AERRRI
Trigger: TATTCTTCTCCTTTCGGCCCATTTTATAGGAGGCAT...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGATGGCTGTACCATGTATaGTGTATGCCTCCTATAAAA +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRWLYHV*CMPPIK
Trigger: TTTTATAGGAGGCATACACCATACATGGTACAGCCA...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTTCAGGTTTGCAGCTGTaGTCTTCTTCTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVSGLQL*SSSCCQ
Trigger: CTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGA...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAACATCAGGTACCTGACTaGACAGACTCAGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQEHQVPD*TDSGLQ
Trigger: CTGCAAACCTGAGTCTGTCCAGTCAGGTACCTGATG...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304523.10
ENST00000507464.5
CDS-3UTR CCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGATTGACAGTGGATTCTaGTGCCGATCATCTTATTGG +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEIDSGF*CRSSYW
Trigger: CCAATAAGATGATCGGCACCAGAATCCACTGTCAAT...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAAGCACTGAGCATTTATaGACAATATGGCCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRSTEHL*TIWPSF
Trigger: AAACGAAGGCCATATTGTCCATAAATGCTCAGTGCT...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTCCATCACATCCTGACTaGACAGACTCAGGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVPSHPD*TDSGLQ
Trigger: CTGCAAACCTGAGTCTGTCCAGTCAGGATGTGATGG...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515064.5
CDS-3UTR TCA 90 bp GGTTGTAAGTTTTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACTCTTTCGAGTGTTTaGGAATGTAATACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: GCKFYVSTSVPALAPILHTLSSV*ECNTGR
Trigger: CCGACCTGTATTACATTCTCAAACACTCGAAAGAGT...GTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACTTACAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp AAGTTTTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCGTGTGCTGGACATCTTaGCTGCTTTTCGAAAATCAA +
Preference number: 4 (lower is better)
Translates to: KFYVSTSVPALAPILHTTVCWTS*LLFENQ
Trigger: TTGATTTTCGAAAAGCAGGCAAGATGTCCAGCACAC...GGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAATCTTCTTGCTGCCAGTaGTGTTTGCATTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQESSCCQ*CLHCSQ
Trigger: CTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGA...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTTCTTCTTGCTGCCAGTaGTGTTTGCATTGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVSSCCQ*CLHCSQ
Trigger: CTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGA...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTTGGCCGCATCATATTaGGTGTTTTCTAATCTAGTG +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLILAASY*VFSNLV
Trigger: CACTAGATTAGAAAACACGCAATATGATGCGGCCAA...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTGGCCGCATCATATTaGGTGTTTTCTAATCTAGTG +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALELAASY*VFSNLV
Trigger: CACTAGATTAGAAAACACGCAATATGATGCGGCCAA...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGGCATCTGCCGCTGAATaGACAATGTATCGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: RYCLMVKCHVLILMRSSKASAAE*TMYRFG
Trigger: ACCAAAGCGATACATTGTGCATTCAGCGGCAGATGC...CTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAATACCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CCA 90 bp AGTTTTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGTGATGGATGAGTTGTaGTATGACTCTTTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: SFMSRHQFLHWLQYYTQPVMDEL*YDSFEC
Trigger: ACACTCGAAAGAGTCATACCACAACTCATCCATCAC...AGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAATTTGGTCTCTTGAGTaGCGGGAGGTTTACTGTTCC +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQEIWSLE*REVYCS
Trigger: GGAACAGTAAACCTCCCGCCACTCAAGAGACCAAAT...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTATTGACAGTGGATTCTaGTGCCGATCATCTTATTGG +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFIDSGF*CRSSYW
Trigger: CCAATAAGATGATCGGCACCAGAATCCACTGTCAAT...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTCCAAGAAAGGGTCATaGAAGCTTACTGGGAATAAT +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLISKKGS*KLTGNN
Trigger: ATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGA...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGAGCACTGAGCATTTATaGACAATATGGCCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALESTEHL*TIWPSF
Trigger: AAACGAAGGCCATATTGTCCATAAATGCTCAGTGCT...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAATATCTGTATTACCTGTaGAGGCCTCCAAGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQEYLYYL*RPPRKG
Trigger: ACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATA...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTGCCGAGACGCATATTTaGTTTCTACAGGAAATAAAC +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFAETHI*FLQEIN
Trigger: GTTTATTTCCTGTAGAAATCAAATATGCGTCTCGGC...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR TCA 90 bp AGTTTTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGCCGAGACGCATATTTaGTTTCTACAGGAAATAAAC +
Preference number: 4 (lower is better)
Translates to: SFMSRHQFLHWLQYYTQPAETHI*FLQEIN
Trigger: GTTTATTTCCTGTAGAAATCAAATATGCGTCTCGGC...AGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR TCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAACACCATCACATCCTGTaGACAGCAGCTGACATTATT +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQEHHHIL*TAADII
Trigger: AATAATGTCAGCTGCTGTTCACAGGATGTGATGGTG...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR GCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAACTCCAAGATCAGTCTaGCTTCTGTACATACCTTGG +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQETPRSV*LLYIPW
Trigger: CCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGT...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp TTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTGTCTAATGGTAAAGTaGCATGTTTTGATTCTCATG +
Preference number: 4 (lower is better)
Translates to: LCLDISSCIGSNITHNLRCLMVK*HVLILM
Trigger: CATGAGAATCAAAACATGGCACTTTACCATTAGACA...CCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp GGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGGTGAACTCCAAGATGTGATGGATGAGTTGTaGTATGACTCTTTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: GKVPCFDSHEIIKGELQDVMDEL*YDSFEC
Trigger: ACACTCGAAAGAGTCATACCACAACTCATCCATCAC...ATCTTGGAGTTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGGTGCCTTTACATGTGTaGAGGAACATATTAATATGC +
Preference number: 4 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEVPLHV*RNILIC
Trigger: GCATATTAATATGTTCCTCCACACATGTAAAGGCAC...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTGTCTAATGGTAAAGTaGCATGTTTTGATTCTCATG +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLICLMVK*HVLILM
Trigger: CATGAGAATCAAAACATGGCACTTTACCATTAGACA...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTCAGGTTTATTAAACTaGCCACAAAACCAATGGATT +
Preference number: 4 (lower is better)
Translates to: HKHVVKTVPEDALEFSLISGLLN*PQNQWI
Trigger: AATCCATTGGTTTTGTGGGCAGTTTAATAAACCTGA...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTGTGCCTTTACATGTGTaGAGGAACATATTAATATGC +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFVPLHV*RNILIC
Trigger: GCATATTAATATGTTCCTCCACACATGTAAAGGCAC...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
3UTR CAA 72 bp AACTCTCGGTATTGTCTAATGGTAAAGTGCCATGTTTaGATTCTCATGAGATCATCAAAGGTGAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: NSRYCLMVKCHV*ILMRSSKVNSK
Trigger: CTTGGAGTTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAATACCGAGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR TCA 90 bp TTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGGTGAAACTCTTTCGAGTGTTTaGGAATGTAATACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: LSNGKVPCFDSHEIIKGETLSSV*ECNTGR
Trigger: CCGACCTGTATTACATTCTCAAACACTCGAAAGAGT...TTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR GCA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTGTCTAATGGTAAAGTaGCATGTTTTGATTCTCATG +
Preference number: 4 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFCLMVK*HVLILM
Trigger: CATGAGAATCAAAACATGGCACTTTACCATTAGACA...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR GCA 90 bp TTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGGTGAACTCGACATCAGTTCCTaGATTGGCTCCAATATTACA +
Preference number: 4 (lower is better)
Translates to: LSNGKVPCFDSHEIIKGELDISS*IGSNIT
Trigger: TGTAATATTGGAGCCAATGCAGGAACTGATGTCGAG...TTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTATGCCTCCTATAAAATaGGCCGAAAGGAGAAGAATA +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVMPPIK*AERRRI
Trigger: TATTCTTCTCCTTTCGGCCCATTTTATAGGAGGCAT...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp TCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGGTGAACTCTGGCTGTACCATGTATaGTGTATGCCTCCTATAAAA +
Preference number: 4 (lower is better)
Translates to: SNGKVPCFDSHEIIKGELWLYHV*CMPPIK
Trigger: TTTTATAGGAGGCATACACCATACATGGTACAGCCA...GAGTTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp CGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGTGGCTGTACCATGTATaGTGTATGCCTCCTATAAAA +
Preference number: 4 (lower is better)
Translates to: RYCLMVKCHVLILMRSSKWLYHV*CMPPIK
Trigger: TTTTATAGGAGGCATACACCATACATGGTACAGCCA...CTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAATACCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAATCCAAGAAAGGGTCATaGAAGCTTACTGGGAATAAT +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQESKKGS*KLTGNN
Trigger: ATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGA...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR TCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTAAGACAAGAACCAATTaGCATCAGCTCAACCATAAA +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVKTRTN*HQLNHK
Trigger: TTTATGGTTGAGCTGATGTCAATTGGTTCTTGTCTT...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CCA 90 bp CGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGTTGGTCTTAAATTCTTaGTTCTGTATCGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: RYCLMVKCHVLILMRSSKLVLNS*FCIALV
Trigger: GACCAAAGCGATACAGAACCAAGAATTTAAGACCAA...CTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAATACCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512345.5
CDS-3UTR GCA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTTGTCTAATGGTAAAGTaGCATGTTTTGATTCTCATG +
Preference number: 4 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVCLMVK*HVLILM
Trigger: CATGAGAATCAAAACATGGCACTTTACCATTAGACA...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR GCA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAATCAGGTTTATTAAACTaGCCACAAAACCAATGGATT +
Preference number: 4 (lower is better)
Translates to: ILITISASICITCEGLQESGLLN*PQNQWI
Trigger: AATCCATTGGTTTTGTGGGCAGTTTAATAAACCTGA...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS TCA 90 bp GGGTCACTGCTGTTGAATGACACAGGTCTCCATCCCTCCCAGGGTTaGGGCTGCAGTTCGGGATCGCTCCTAGCCCAGGTACCTGACTGG +
Preference number: 5 (lower is better)
Translates to: GSLLLNDTGLHPSQG*GCSSGSLLAQVPDW
Trigger: CCAGTCAGGTACCTGGGCTAGGAGCGATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCAGTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS TCA 90 bp GGGTCACTGCTGTTGAATGACACAGGTCTCCATCCCTCCCAGGGTTaGGGCTGCAGTTCGGGATCGCTCCTAGCCCCTGCTCATGGAGTG +
Preference number: 5 (lower is better)
Translates to: GSLLLNDTGLHPSQG*GCSSGSLLAPAHGV
Trigger: CACTCCATGAGCAGGGGCTAGGAGCGATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCAGTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509803.1
CDS-3UTR CAA 90 bp GCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTTGGTGCCGATCATCTTATaGGGAAGCCTGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: AGGLLFHGLLFPSAGELLVPIIL*GSLGWG
Trigger: CCCCCACCCCAGGCTTCCCAATAAGATGATCGGCAC...CAACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CAA 90 bp TTCTCCGTTTGGTTGTTGGTTGCCTTGTGGGTTCTGCTGGCGGAGCCACCATCCGCGTCCCACCAGAGGTaGTCACTATCCTCTGTGCGA +
Preference number: 5 (lower is better)
Translates to: FSVWLLVALWVLLAEPPSASHQR*SLSSVR
Trigger: TCGCACAGAGGATAGTGACAACCTCTGGTGGGACGC...GGATGGTGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CAA 90 bp GCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTTGCACCTCCCATCAGAGTaGGCTCTCCTACCACCATCA +
Preference number: 5 (lower is better)
Translates to: AGGLLFHGLLFPSAGELLHLPSE*ALLPPS
Trigger: TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTG...CAACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CAA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTGCTGTGGTCTTCTTCTaGCTGCCAGTGCTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: WREVYCSTGCCSPARVNCAVVFF*LPVLFA
Trigger: TGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGC...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS GCA 90 bp TGCCGCAGCAGCTACACAGACCACAGCTGTGGTCATAGTGGCACATaGCTTTGGACCAGACAGTGGATGCCTGCAGGTAGCATCTCTAGT +
Preference number: 5 (lower is better)
Translates to: CRSSYTDHSCGHSGT*LWTRQWMPAGSISS
Trigger: ACTAGAGATGCTACCTGCAGGCATCCACTGTCTGGTCCAAAGGCATGTGCCACTATGACCACAGCTGTGGTCTGTGTAGCTGCTGCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509803.1
CDS CCA 90 bp CTCCTAGCCCAGGTACCTGACTGGACAGACTCAGGTTTGCAGCTGTaGTCTTCTTCTTGCTGCCAGTGCTGTTTGCATTGTTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: LLAQVPDWTDSGLQL*SSSCCQCCLHCSQR
Trigger: GCGCTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCAGTCAGGTACCTGGGCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS-3UTR CAA 90 bp ACGGGCCTATTGACAGTGGATTCTGGTGCCGATCATCTTATTGGGAAGCCTGGGTGCTGCCAGTGCTGTTaGCATTGTTCCCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: TGLLTVDSGADHLIGKPGCCQCC*HCSQRC
Trigger: GCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCA...CCCAGGCTTCCCAATAAGATGATCGGCACCAGAATCCACTGTCAATAGGCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CAA 90 bp AACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAGGCCCAGCGCGGGTGAATaGTTGAAGTCCTCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: NGVKSQCRGPRRIFDFYRPSAGE*LKSSSS
Trigger: CGACGAGGAGGACTTCAACAATTCACCCGCGCTGGG...CCTGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR CAA 90 bp GCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTTGATGCTTCTCCTTAAATaGGCCAGAAGGGGTCACTGC +
Preference number: 5 (lower is better)
Translates to: AGGLLFHGLLFPSAGELLMLLLK*ARRGHC
Trigger: GCAGTGACCCCTTCTGGCCAATTTAAGGAGAAGCAT...CAACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS TCA 90 bp CAATGCTTCTCCTTAAATTGGCCAGAAGGGGTCACTGCTGTTGAATaGCACAGGTCTCCATCCCTCCCAGGGTTGAGGCTGCAGTTCGGG +
Preference number: 5 (lower is better)
Translates to: QCFSLNWPEGVTAVE*HRSPSLPGLRLQFG
Trigger: CCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCAGTGACCCCTTCTGGCCAATTTAAGGAGAAGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000509803.1
CDS CCA 90 bp CTGCCGATAGCTCGAGGGACTTGGGCTCATTCCAGTGGACAAGAATaGGAGCCAGACAGCTTTGTTGCTTTGCTGGGTGCACCACGATTT +
Preference number: 5 (lower is better)
Translates to: LPIARGTWAHSSGQE*EPDSFVALLGAPRF
Trigger: AAATCGTGGTGCACCCAGCAAAGCAACAAAGCTGTCTGGCTCCCATTCTTGTCCACTGGAATGAGCCCAAGTCCCTCGAGCTATCGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503153.5
CDS-3UTR CAA 90 bp GCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTTGGGTGTGCTGGACATCTaGCCTGCTTTTCGAAAATCA +
Preference number: 5 (lower is better)
Translates to: AGGLLFHGLLFPSAGELLGVLDI*PAFRKS
Trigger: TGATTTTCGAAAAGCAGGCAAGATGTCCAGCACACC...CAACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CAA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTGGTGTGCTGGACATCTaGCCTGCTTTTCGAAAATCA +
Preference number: 5 (lower is better)
Translates to: WREVYCSTGCCSPARVNCGVLDI*PAFRKS
Trigger: TGATTTTCGAAAAGCAGGCAAGATGTCCAGCACACC...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CAA 90 bp ACGGGCCTATTGACAGTGGATTCTGGTGCCGATCATCTTATTGGGAAGCCTGGGCCAGTGCTGTTTGCATaGTTCCCAGCGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: TGLLTVDSGADHLIGKPGPVLFA*FPALLL
Trigger: CAACAGCAGCGCTGGGAACAATGCAAACAGCACTGG...CCCAGGCTTCCCAATAAGATGATCGGCACCAGAATCCACTGTCAATAGGCCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CAA 90 bp TTTTCTCCGTTTGGTTGTTGGTTGCCTTGTGGGTTCTGCTGGCGGAGCCACCATCACCTCCCATCAGAGTaGGCTCTCCTACCACCATCA +
Preference number: 5 (lower is better)
Translates to: FSPFGCWLPCGFCWRSHHHLPSE*ALLPPS
Trigger: TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTG...ATGGTGGCTCCGCCAGCAGAACCCACAAGGCAACCAACAACCAAACGGAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CAA 90 bp AACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAGGTCGTCGTCCATGCCGTaGGCCGCATCATATTGCGTG +
Preference number: 5 (lower is better)
Translates to: NGVKSQCRGPRRIFDFYRSSSMP*AASYCV
Trigger: CACGCAATATGATGCGGCCAACGGCATGGACGACGA...CCTGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502640.5
CDS-3UTR CAA 90 bp TTTCTGATTTGGTCTCTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTCCCAGCGCGGGTGAATaGTTGAAGTCCTCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: FLIWSLEWREVYCSTGCCPSAGE*LKSSSS
Trigger: CGACGAGGAGGACTTCAACAATTCACCCGCGCTGGG...ACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CAA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTCTGTTCCACGGGCTGTaGTTCCCCAGCGCGGGTGAA +
Preference number: 5 (lower is better)
Translates to: SASICITCEGLQERVMEALFHGL*FPSAGE
Trigger: TTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAG...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGCTGTTCCACGGGCTGTaGTTCCCCAGCGCGGGTGAA +
Preference number: 5 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWLFHGL*FPSAGE
Trigger: TTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAG...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS TCA 90 bp CCCTCAATGCTTCTCCTTAAATTGGCCAGAAGGGGTCACTGCTGTTaGATGACACAGGTCTCCATCCCTCCCAGGGTTGAGGCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: PSMLLLKLARRGHCC*MTQVSIPPRVEAAV
Trigger: AACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCAGTGACCCCTTCTGGCCAATTTAAGGAGAAGCATTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000509803.1
CDS CCA 90 bp CCATCACATCAGGTACCTGACTGGACAGACTCAGGTTTGCAGCTGTaGTCTTCTTCTTGCTGCCAGTGCTGTTTGCATTGTTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: PSHQVPDWTDSGLQL*SSSCCQCCLHCSQR
Trigger: GCGCTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCAGTCAGGTACCTGATGTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304523.10
ENST00000507464.5
CDS CCA 90 bp CTACCACCATCACATCCTGACTGGACAGACTCAGGTTTGCAGCTGTaGTCTTCTTCTTGCTGCCAGTGCTGTTTGCATTGTTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: LPPSHPDWTDSGLQL*SSSCCQCCLHCSQR
Trigger: GCGCTGGGAACAATGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCAGTCAGGATGTGATGGTGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515064.5
CDS-3UTR CAA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAACTGTTCCACGGGCTGTaGTTCCCCAGCGCGGGTGAA +
Preference number: 5 (lower is better)
Translates to: ISASICITCEGLQERVMELFHGL*FPSAGE
Trigger: TTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAG...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTGTGCCGATCATCTTATaGGGAAGCCTGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: SASICITCEGLQERVMEAVPIIL*GSLGWG
Trigger: CCCCCACCCCAGGCTTCCCAATAAGATGATCGGCAC...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGAGAAGCTCAGCTTAAAATAACAGTGGGAGGAGTCGGGGAATCTAGGACAGACGCGTCCCACCAGAGGTaGTCACTATCCTCTGTGCGA +
Preference number: 5 (lower is better)
Translates to: REAQLKITVGGVGESRTDASHQR*SLSSVR
Trigger: TCGCACAGAGGATAGTGACAACCTCTGGTGGGACGC...GTCTGTCCTAGATTCCCCGACTCCTCCCACTGTTATTTTAAGCTGAGCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CAA 90 bp AGAGAAGCTCAGCTTAAAATAACAGTGGGAGGAGTCGGGGAATCTAGGACAGACTGGTTGTTGGTTGCCTaGTGGGTTCTGCTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: REAQLKITVGGVGESRTDWLLVA*WVLLAE
Trigger: CTCCGCCAGCAGAACCCACAAGGCAACCAACAACCA...GTCTGTCCTAGATTCCCCGACTCCTCCCACTGTTATTTTAAGCTGAGCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CAA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGTGCTGCCAGTGCTGTTaGCATTGTTCCCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWCCQCC*HCSQRC
Trigger: GCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCA...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTCGTCGTCCATGCCGTaGGCCGCATCATATTGCGTG +
Preference number: 5 (lower is better)
Translates to: SASICITCEGLQERVMEASSSMP*AASYCV
Trigger: CACGCAATATGATGCGGCCAACGGCATGGACGACGA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTAGCGCGGGTGAATTGTaGAAGTCCTCCTCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: SASICITCEGLQERVMEASAGEL*KSSSSS
Trigger: GGACGACGAGGAGGACTTCAACAATTCACCCGCGCT...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGACTGTTCCACGGGCTGTaGTTCCCCAGCGCGGGTGAA +
Preference number: 5 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRLFHGL*FPSAGE
Trigger: TTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAG...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGTGCCGATCATCTTATaGGGAAGCCTGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: ISASICITCEGLQERVMEVPIIL*GSLGWG
Trigger: CCCCCACCCCAGGCTTCCCAATAAGATGATCGGCAC...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTCACCCACGGGCCTATaGACAGTGGATTCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: SASICITCEGLQERVMEASPTGL*TVDSGA
Trigger: GGCACCAGAATCCACTGTCAATAGGCCCGTGGGTGA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGTCACCCACGGGCCTATaGACAGTGGATTCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWSPTGL*TVDSGA
Trigger: GGCACCAGAATCCACTGTCAATAGGCCCGTGGGTGA...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp TGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTCCCCAGCGCGGGTGAATTGTTTCAACACAAACACGTaGTTAAAACCGTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: WREVYCSTGCCSPARVNCFNTNT*LKPCQK
Trigger: CTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAA...ACAATTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAGTAAACCTCCCGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS GCA 90 bp ATGAGCCTCGGCAGCAAGCCTCTCCTACTGCTTACTGTGAAAGGATaGCAACACCTGGATGGAAACGCTGCAGAAGACAGATCCATTAGA +
Preference number: 5 (lower is better)
Translates to: MSLGSKPLLLLTVKG*QHLDGNAAEDRSIR
Trigger: TCTAATGGATCTGTCTTCTGCAGCGTTTCCATCCAGGTGTTGGCATCCTTTCACAGTAAGCAGTAGGAGAGGCTTGCTGCCGAGGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503829.5
CDS-3UTR CAA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAATGCTGCCAGTGCTGTTaGCATTGTTCCCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: ISASICITCEGLQERVMECCQCC*HCSQRC
Trigger: GCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCA...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp TTTCTGATTTGGTCTCTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTGCTGTGGTCTTCTTCTaGCTGCCAGTGCTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: FLIWSLEWREVYCSTGCCAVVFF*LPVLFA
Trigger: TGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGC...ACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CAA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGCACCTCCCATCAGAGTaGGCTCTCCTACCACCATCA +
Preference number: 5 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWHLPSE*ALLPPS
Trigger: TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTG...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCAGCGCGGGTGAATTGTaGAAGTCCTCCTCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: PLAASYCVFSNLVISLSSSAGEL*KSSSSS
Trigger: GGACGACGAGGAGGACTTCAACAATTCACCCGCGCT...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCGGCCAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CAA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAAGCGCGGGTGAATTGTaGAAGTCCTCCTCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: ISASICITCEGLQERVMESAGEL*KSSSSS
Trigger: GGACGACGAGGAGGACTTCAACAATTCACCCGCGCT...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAACCAGTGCTGTTTGCATaGTTCCCAGCGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: ISASICITCEGLQERVMEPVLFA*FPALLL
Trigger: CAACAGCAGCGCTGGGAACAATGCAAACAGCACTGG...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGATGCTGCCAGTGCTGTTaGCATTGTTCCCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRCCQCC*HCSQRC
Trigger: GCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCA...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGGTGCCGATCATCTTATaGGGAAGCCTGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEVPIIL*GSLGWG
Trigger: CCCCCACCCCAGGCTTCCCAATAAGATGATCGGCAC...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGACCGTTTGGTTGTTGGTaGCCTTGTGGGTTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRPFGCW*PCGFWR
Trigger: CCGCCAGAACCCACAAGGCAACCAACAACCAAACGG...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507464.5
CDS CCA 90 bp TCGGTACTCTGGCTGTACCATGTATGGTGTATGCCTCCTATAAAATaGGCCGAAAGGAGAAGAATAGAAGGGGTCATGTGGTGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: SVLWLYHVWCMPPIK*AERRRIEGVMWCAG
Trigger: TCCAGCACACCACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGGCATACACCATACATGGTACAGCCAGAGTACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000508918.5
ENST00000510825.5
ENST00000512345.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTGCGTCCCACCAGAGGTaGTCACTATCCTCTGTGCGA +
Preference number: 5 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIASHQR*SLSSVR
Trigger: TCGCACAGAGGATAGTGACAACCTCTGGTGGGACGC...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTCCTTCTGTACATACCTaGGTAAACATGGGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: SASICITCEGLQERVMEAPSVHT*VNMGFP
Trigger: CGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGG...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGCCTTCTGTACATACCTaGGTAAACATGGGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWPSVHT*VNMGFP
Trigger: CGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGG...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTGGTTGTTGGTTGCCTaGTGGGTTCTGCTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEWLLVA*WVLLAE
Trigger: CTCCGCCAGCAGAACCCACAAGGCAACCAACAACCA...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTTCTCCGTTTGGTTGTaGGTTGCCTTGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: SASICITCEGLQERVMEAFSVWL*VALWVL
Trigger: CAGAACCCACAAGGCAACCAACAACCAAACGGAGAA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGAGAAGCTCAGCTTAAAATAACAGTGGGAGGAGTCGGGGAATCTAGGACAGACTTCTCCGTTTGGTTGTaGGTTGCCTTGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: REAQLKITVGGVGESRTDFSVWL*VALWVL
Trigger: CAGAACCCACAAGGCAACCAACAACCAAACGGAGAA...GTCTGTCCTAGATTCCCCGACTCCTCCCACTGTTATTTTAAGCTGAGCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CAA 90 bp GAGATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGGTCCAGTGCTGTTTGCATaGTTCCCAGCGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: EIIKGELQDQSAFCTYLGPVLFA*FPALLL
Trigger: CAACAGCAGCGCTGGGAACAATGCAAACAGCACTGG...ACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CAA 90 bp CTCGGGACTAACTCTCGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCTGCTGCCAGTGCTGTTaGCATTGTTCCCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: LGTNSRYCLMVKCHVLILCCQCC*HCSQRC
Trigger: GCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCA...GAGAATCAAAACATGGCACTTTACCATTAGACAATACCGAGAGTTAGTCCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CAA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTGGACAGACTCAGGTTaGCAGCTGTGGTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SASICITCEGLQERVMEAWTDSG*QLWSSS
Trigger: AGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTCCCAGCGCGGGTGAATaGTTGAAGTCCTCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFPSAGE*LKSSSS
Trigger: CGACGAGGAGGACTTCAACAATTCACCCGCGCTGGG...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTGGTTGTTGGTTGCCTaGTGGGTTCTGGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEWLLVA*WVLAEP
Trigger: TGGCTCCGCCAGAACCCACAAGGCAACCAACAACCA...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507464.5
CDS CCA 90 bp AATTGTAATAATCCATCACAGGCATCTGGTTCCGAATCCCCGAGCTaGTTGCAGTTTCCTCTGGCATCTGCCGCTGAATGCACAATGTAT +
Preference number: 5 (lower is better)
Translates to: NCNNPSQASGSESPS*LQFPLASAAECTMY
Trigger: ATACATTGTGCATTCAGCGGCAGATGCCAGAGGAAACTGCAACCAGCTCGGGGATTCGGAACCAGATGCCTGTGATGGATTATTACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CAA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTGCGTCCCACCAGAGGTaGTCACTATCCTCTGTGCGA +
Preference number: 5 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFASHQR*SLSSVR
Trigger: TCGCACAGAGGATAGTGACAACCTCTGGTGGGACGC...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CAA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAACCTTCTGTACATACCTaGGTAAACATGGGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: ISASICITCEGLQERVMEPSVHT*VNMGFP
Trigger: CGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGG...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp GGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGGTAAACATGGGCTTCCTTCTGTACATACCTaGGTAAACATGGGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: GELQDQSAFCTYLGKHGLPSVHT*VNMGFP
Trigger: CGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGG...AAGCCCATGTTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CAA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTGGTTGTTGGTTGCCTaGTGGGTTCTGCTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFWLLVA*WVLLAE
Trigger: CTCCGCCAGCAGAACCCACAAGGCAACCAACAACCA...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CAA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAATTCTCCGTTTGGTTGTaGGTTGCCTTGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: ISASICITCEGLQERVMEFSVWL*VALWVL
Trigger: CAGAACCCACAAGGCAACCAACAACCAAACGGAGAA...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGCCAGTGCTGTTTGCATaGTTCCCAGCGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEPVLFA*FPALLL
Trigger: CAACAGCAGCGCTGGGAACAATGCAAACAGCACTGG...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAGCTGTGGTCTTCTTCTaGCTGCCAGTGCTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRAVVFF*LPVLFA
Trigger: TGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGC...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp TTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGGCTGTGGTCTTCTTCTaGCTGCCAGTGCTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: LCLDISSCIGSNITHNLRAVVFF*LPVLFA
Trigger: TGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGC...CCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CAA 90 bp AAACAAGCAGGTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTTGGACAGACTCAGGTTaGCAGCTGTGGTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: KQAGLQAVSGTEVVSFMSWTDSG*QLWSSS
Trigger: AGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCA...AGACATAAAACTTACAACCTCAGTCCCCGAGACTGCCTGAAGACCTGCTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CAA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGCACCTCCCATCAGAGTaGGCTCTCCTACCACCATCA +
Preference number: 5 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEHLPSE*ALLPPS
Trigger: TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTG...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTCACCTCCCATCAGAGTaGGCTCTCCTACCACCATCA +
Preference number: 5 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIHLPSE*ALLPPS
Trigger: TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTG...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAACTGTTCCACGGGCTGTaGTTCCCCAGCGCGGGTGAA +
Preference number: 5 (lower is better)
Translates to: ILITISASICITCEGLQELFHGL*FPSAGE
Trigger: TTCACCCGCGCTGGGGAACAACAGCCCGTGGAACAG...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTCCATCCCTCCCAGGGTaGAGGCTGCAGTTCGGGATC +
Preference number: 5 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVPSLPG*RLQFGI
Trigger: GATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGG...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS-3UTR CAA 90 bp AACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTTGATTTCTACAGGGCACAATGTATCGCTTaGGTCCATCTTCCAAACAAA +
Preference number: 5 (lower is better)
Translates to: NGVKSQCRGPRRIFDFYRAQCIA*VHLPNK
Trigger: TTTGTTTGGAAGATGGACCAAAGCGATACATTGTGC...CCTGTAGAAATCAAATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS TCA 90 bp AAAGTAACGGGGGATGAGGGTCCTGCCGATAGCTCAAGTGGCTACTaGTTAGATATGGTAACATGTAATGTCCTCATCAGAGTGACTCTC +
Preference number: 5 (lower is better)
Translates to: KVTGDEGPADSSSGY*LDMVTCNVLIRVTL
Trigger: GAGAGTCACTCTGATGAGGACATTACATGTTACCATATCTAATCAGTAGCCACTTGAGCTATCGGCAGGACCCTCATCCCCCGTTACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503829.5
CDS CCA 90 bp TGTGCGAGACTGCAGTCTCTTGTTCATCTCATAGATTCGGTACTCTaGCTGTACCATGTATGGTGTATGCCTCCTATAAAATGGGCCGAA +
Preference number: 5 (lower is better)
Translates to: CARLQSLVHLIDSVL*LYHVWCMPPIKWAE
Trigger: TTCGGCCCATTTTATAGGAGGCATACACCATACATGGTACAGCCAGAGTACCGAATCTATGAGATGAACAAGAGACTGCAGTCTCGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000508918.5
ENST00000510825.5
ENST00000512345.5
ENST00000515064.5
CDS CCA 90 bp CTGCTACTCTCAACTTCTACAACCATGTCAGACATCACTAATGGATaGCCCACCAAACCCAGACTAGACCTTAGAATCCTCCTCAATACC +
Preference number: 5 (lower is better)
Translates to: LLLSTSTTMSDITNG*PTKPRLDLRILLNT
Trigger: GGTATTGAGGAGGATTCTAAGGTCTAGTCTGGGTTTGGTGGGCCATCCATTAGTGATGTCTGACATGGTTGTAGAAGTTGAGAGTAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509803.1
CDS-3UTR CAA 90 bp AAACAAGCAGGTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTGGTGTGCTGGACATCTaGCCTGCTTTTCGAAAATCA +
Preference number: 5 (lower is better)
Translates to: KQAGLQAVSGTEVVSFMSGVLDI*PAFRKS
Trigger: TGATTTTCGAAAAGCAGGCAAGATGTCCAGCACACC...AGACATAAAACTTACAACCTCAGTCCCCGAGACTGCCTGAAGACCTGCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CAA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAACCGTGATGGATGAGTaGTGGTATGACTCTTTCGAG +
Preference number: 5 (lower is better)
Translates to: ISASICITCEGLQERVMETVMDE*WYDSFE
Trigger: CTCGAAAGAGTCATACCACAACTCATCCATCACGGT...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp ATCACATCCTGTGAACAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGACCGTGATGGATGAGTaGTGGTATGACTCTTTCGAG +
Preference number: 5 (lower is better)
Translates to: ITSCEQQLTLLQGNLGRETVMDE*WYDSFE
Trigger: CTCGAAAGAGTCATACCACAACTCATCCATCACGGT...CTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTGTTCACAGGATGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CAA 90 bp AAACAAGCAGGTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTACCGTGATGGATGAGTaGTGGTATGACTCTTTCGAG +
Preference number: 5 (lower is better)
Translates to: KQAGLQAVSGTEVVSFMSTVMDE*WYDSFE
Trigger: CTCGAAAGAGTCATACCACAACTCATCCATCACGGT...AGACATAAAACTTACAACCTCAGTCCCCGAGACTGCCTGAAGACCTGCTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CAA 90 bp TCGTGTACTGTACAACGGGGTCAAGTCTCAATGTCGGGGGCCGAGACGCATATTGTAAAGTGCCATGTTTaGATTCTCATGAGATCATCA +
Preference number: 5 (lower is better)
Translates to: SCTVQRGQVSMSGAETHIVKCHV*ILMRSS
Trigger: TGATGATCTCATGAGAATCAAAACATGGCACTTTAC...AATATGCGTCTCGGCCCCCGACATTGAGACTTGACCCCGTTGTACAGTACACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CAA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTTTTTTCTCCGTTTGGTaGTTGGTTGCCTTGTGGGTT +
Preference number: 5 (lower is better)
Translates to: SASICITCEGLQERVMEAFFSVW*LVALWV
Trigger: AACCCACAAGGCAACCAACAACCAAACGGAGAAAAA...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGTTTTTCTCCGTTTGGTaGTTGGTTGCCTTGTGGGTT +
Preference number: 5 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWFFSVW*LVALWV
Trigger: AACCCACAAGGCAACCAACAACCAAACGGAGAAAAA...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGTTCCTTTTTCTCCGTTaGGTTGTTGGTTGCCTTGTG +
Preference number: 5 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWFLFLR*VVGCLV
Trigger: CACAAGGCAACCAACAACCAAACGGAGAAAAAGGAA...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTCCAGTGCTGTTTGCATaGTTCCCAGCGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFPVLFA*FPALLL
Trigger: CAACAGCAGCGCTGGGAACAATGCAAACAGCACTGG...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGATGGACAGACTCAGGTTaGCAGCTGTGGTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRWTDSG*QLWSSS
Trigger: AGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCA...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAACCCAGCGCGGGTGAATaGTTGAAGTCCTCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: ILITISASICITCEGLQEPSAGE*LKSSSS
Trigger: CGACGAGGAGGACTTCAACAATTCACCCGCGCTGGG...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTGTGCCGATCATCTTATaGGGAAGCCTGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVVPIIL*GSLGWG
Trigger: CCCCCACCCCAGGCTTCCCAATAAGATGATCGGCAC...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CAA 90 bp TTTCTGATTTGGTCTCTTGAGTGGCGGGAGGTTTACTGTTCCACGGGCTGTTGTTTCAACACAAACACGTaGTTAAAACCGTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: FLIWSLEWREVYCSTGCCFNTNT*LKPCQK
Trigger: CTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAA...ACAACAGCCCGTGGAACAGTAAACCTCCCGCCACTCAAGAGACCAAATCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CAA 90 bp AGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAGCTAGCACTTGGGCTAAATaGAGTCGACTCAAGACAAGA +
Preference number: 5 (lower is better)
Translates to: SASICITCEGLQERVMEASTWAK*SRLKTR
Trigger: TCTTGTCTTGAGTCGACTCAATTTAGCCCAAGTGCT...AGCTTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGTTTTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAATCCCCGAGCTGGTaGCAGTTTCCTCTGGCATCT +
Preference number: 5 (lower is better)
Translates to: SFMSRHQFLHWLQYYTQPESPSW*QFPLAS
Trigger: AGATGCCAGAGGAAACTGCAACCAGCTCGGGGATTC...AGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CAA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAGGTGTGCTGGACATCTaGCCTGCTTTTCGAAAATCA +
Preference number: 5 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRGVLDI*PAFRKS
Trigger: TGATTTTCGAAAAGCAGGCAAGATGTCCAGCACACC...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGAACCGTGATGGATGAGTaGTGGTATGACTCTTTCGAG +
Preference number: 5 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRTVMDE*WYDSFE
Trigger: CTCGAAAGAGTCATACCACAACTCATCCATCACGGT...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CTCGGGACTAACTCTCGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCCCTTCTGTACATACCTaGGTAAACATGGGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: LGTNSRYCLMVKCHVLILPSVHT*VNMGFP
Trigger: CGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGG...GAGAATCAAAACATGGCACTTTACCATTAGACAATACCGAGAGTTAGTCCCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CAA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAATGGTTGTTGGTTGCCTaGTGGGTTCTGCTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: ILITISASICITCEGLQEWLLVA*WVLLAE
Trigger: CTCCGCCAGCAGAACCCACAAGGCAACCAACAACCA...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CGGTATTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGTGGTTGTTGGTTGCCTaGTGGGTTCTGCTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: RYCLMVKCHVLILMRSSKWLLVA*WVLLAE
Trigger: CTCCGCCAGCAGAACCCACAAGGCAACCAACAACCA...CTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAATACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CAA 90 bp ATCACATCCTGTGAACAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGTTTTTCTCCGTTTGGTaGTTGGTTGCCTTGTGGGTT +
Preference number: 5 (lower is better)
Translates to: ITSCEQQLTLLQGNLGREFFSVW*LVALWV
Trigger: AACCCACAAGGCAACCAACAACCAAACGGAGAAAAA...CTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTGTTCACAGGATGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CAA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAATGCTGCCAGTGCTGTTaGCATTGTTCCCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: ILITISASICITCEGLQECCQCC*HCSQRC
Trigger: GCAGCGCTGGGAACAATGCAAACAGCACTGGCAGCA...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTGCTGTGGTCTTCTTCTaGCTGCCAGTGCTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFAVVFF*LPVLFA
Trigger: TGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGC...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAATCGTCGTCCATGCCGTaGGCCGCATCATATTGCGTG +
Preference number: 5 (lower is better)
Translates to: ILITISASICITCEGLQESSSMP*AASYCV
Trigger: CACGCAATATGATGCGGCCAACGGCATGGACGACGA...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTTCGTCGTCCATGCCGTaGGCCGCATCATATTGCGTG +
Preference number: 5 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVSSSMP*AASYCV
Trigger: CACGCAATATGATGCGGCCAACGGCATGGACGACGA...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CAA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAATCACCCACGGGCCTATaGACAGTGGATTCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: ILITISASICITCEGLQESPTGL*TVDSGA
Trigger: GGCACCAGAATCCACTGTCAATAGGCCCGTGGGTGA...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CCGTTGGCCGCATCATATTGCGTGTTTTCTAATCTAGTGATTAGCCTTTCGTCCAGCACTTGGGCTAAATaGAGTCGACTCAAGACAAGA +
Preference number: 5 (lower is better)
Translates to: PLAASYCVFSNLVISLSSSTWAK*SRLKTR
Trigger: TCTTGTCTTGAGTCGACTCAATTTAGCCCAAGTGCT...GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCGGCCAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000502640.5
CDS-3UTR CAA 90 bp ATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGAAAGCACTTGGGCTAAATaGAGTCGACTCAAGACAAGA +
Preference number: 5 (lower is better)
Translates to: ISASICITCEGLQERVMESTWAK*SRLKTR
Trigger: TCTTGTCTTGAGTCGACTCAATTTAGCCCAAGTGCT...TTCCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTAAGGGGTCACTGCTGTaGAATGACACAGGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIKGSLL*NDTGLH
Trigger: ATGGAGACCTGTGTCATTCAACAGCAGTGACCCCTT...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS-3UTR CAA 90 bp AAACAAGCAGGTCTTCAGGCAGTCTCGGGGACTGAGGTTGTAAGTTTTATGTCTGTCCTGCCGATAGCTTaGGTCAAACAGAAAAGCAAT +
Preference number: 5 (lower is better)
Translates to: KQAGLQAVSGTEVVSFMSVLPIA*VKQKSN
Trigger: ATTGCTTTTCTGTTTGACCAAAGCTATCGGCAGGAC...AGACATAAAACTTACAACCTCAGTCCCCGAGACTGCCTGAAGACCTGCTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CAA 90 bp TTGTCTAATGGTAAAGTGCCATGTTTTGATTCTCATGAGATCATCAAAGGTGAAGCGTCCCACCAGAGGTaGTCACTATCCTCTGTGCGA +
Preference number: 5 (lower is better)
Translates to: LSNGKVPCFDSHEIIKGEASHQR*SLSSVR
Trigger: TCGCACAGAGGATAGTGACAACCTCTGGTGGGACGC...TTCACCTTTGATGATCTCATGAGAATCAAAACATGGCACTTTACCATTAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CAA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGACCGTGATGGATGAGTaGTGGTATGACTCTTTCGAG +
Preference number: 5 (lower is better)
Translates to: KEIQHKHVVKTVPEDALETVMDE*WYDSFE
Trigger: CTCGAAAGAGTCATACCACAACTCATCCATCACGGT...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AAGTTTTATGTCTCGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTTCTCCGTTTGGTTGTaGGTTGCCTTGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: KFYVSTSVPALAPILHTTFSVWL*VALWVL
Trigger: CAGAACCCACAAGGCAACCAACAACCAAACGGAGAA...GGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS-3UTR CAA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGATTCCTTTTTCTCCGTTaGGTTGTTGGTTGCCTTGTG +
Preference number: 5 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRFLFLR*VVGCLV
Trigger: CACAAGGCAACCAACAACCAAACGGAGAAAAAGGAA...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTGGACAGACTCAGGTTaGCAGCTGTGGTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFWTDSG*QLWSSS
Trigger: AGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCA...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAACACCTCCCATCAGAGTaGGCTCTCCTACCACCATCA +
Preference number: 5 (lower is better)
Translates to: ILITISASICITCEGLQEHLPSE*ALLPPS
Trigger: TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTG...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp GGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGGTAAACATGGGCTTTGGTTCTGTATCGCTTaGGTCCATCTTCCAAACAAA +
Preference number: 5 (lower is better)
Translates to: GELQDQSAFCTYLGKHGLWFCIA*VHLPNK
Trigger: TTTGTTTGGAAGATGGACCAAAGCGATACAGAACCA...AAGCCCATGTTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512345.5
CDS-3UTR CAA 90 bp ATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGGTAAAGGTGTGCTGGACATCTaGCCTGCTTTTCGAAAATCA +
Preference number: 5 (lower is better)
Translates to: IIKGELQDQSAFCTYLGKGVLDI*PAFRKS
Trigger: TGATTTTCGAAAAGCAGGCAAGATGTCCAGCACACC...TTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CAA 90 bp CAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAAAGGGTCATGGGTAAAGTGCCATGTTTaGATTCTCATGAGATCATCA +
Preference number: 5 (lower is better)
Translates to: QSVPVSVLPVKASKKGSWVKCHV*ILMRSS
Trigger: TGATGATCTCATGAGAATCAAAACATGGCACTTTAC...CCATGACCCTTTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTTTTTCTCCGTTTGGTaGTTGGTTGCCTTGTGGGTT +
Preference number: 5 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIFFSVW*LVALWV
Trigger: AACCCACAAGGCAACCAACAACCAAACGGAGAAAAA...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTTTCCTTTTTCTCCGTTaGGTTGTTGGTTGCCTTGTG +
Preference number: 5 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIFLFLR*VVGCLV
Trigger: CACAAGGCAACCAACAACCAAACGGAGAAAAAGGAA...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp TTGATTTCTACAGGAAATAAACATCGCCTCCTGATGTGTAACAACCACGCGAGTTTCCTTTTTCTCCGTTaGGTTGTTGGTTGCCTTGTG +
Preference number: 5 (lower is better)
Translates to: LISTGNKHRLLMCNNHASFLFLR*VVGCLV
Trigger: CACAAGGCAACCAACAACCAAACGGAGAAAAAGGAA...ACTCGCGTGGTTGTTACACATCAGGAGGCGATGTTTATTTCCTGTAGAAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CAA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTGCTGTGGTCTTCTTCTaGCTGCCAGTGCTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVAVVFF*LPVLFA
Trigger: TGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGC...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AGGCCTCCAAGAAAGGGTCATGGAAGCTTACTGGGAATAATCCTCTCAATTAGATTCAACACAAACACGTaGTTAAAACCGTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: RPPRKGHGSLLGIILSIRFNTNT*LKPCQK
Trigger: CTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAA...TCTAATTGAGAGGATTATTCCCAGTAAGCTTCCATGACCCTTTCTTGGAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp ATCACATCCTGTGAACAGCAGCTGACATTATTACAGGGAAACCTTGGGAGAGAGGGCCGAGACGCATATTaGATTTCTACAGGAAATAAA +
Preference number: 5 (lower is better)
Translates to: ITSCEQQLTLLQGNLGREGRDAY*ISTGNK
Trigger: TTTATTTCCTGTAGAAATCAAATATGCGTCTCGGCC...CTCTCTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTGTTCACAGGATGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502640.5
ENST00000508918.5
CDS-3UTR CAA 90 bp CATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGGGTGGCCGAGACGCATATTaGATTTCTACAGGAAATAAA +
Preference number: 5 (lower is better)
Translates to: HQFLHWLQYYTQPEVVEGGRDAY*ISTGNK
Trigger: TTTATTTCCTGTAGAAATCAAATATGCGTCTCGGCC...ACCCTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS CCA 90 bp TCTCTTGTTCATCTCATAGATTCGGTACTCTGGCTGTACCATGTATaGTGTATGCCTCCTATAAAATGGGCCGAAAGGAGAAGAATAGAA +
Preference number: 5 (lower is better)
Translates to: SLVHLIDSVLWLYHV*CMPPIKWAERRRIE
Trigger: TTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGGCATACACCATACATGGTACAGCCAGAGTACCGAATCTATGAGATGAACAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000508918.5
ENST00000510825.5
ENST00000512345.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTCCTTCTGTACATACCTaGGTAAACATGGGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVPSVHT*VNMGFP
Trigger: CGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGG...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CGACATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGGTAAAGTGCCATGTTTaGATTCTCATGAGATCATCA +
Preference number: 5 (lower is better)
Translates to: RHQFLHWLQYYTQPEVVEVKCHV*ILMRSS
Trigger: TGATGATCTCATGAGAATCAAAACATGGCACTTTAC...CTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATGTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS-3UTR CAA 90 bp ATTTTAATTACAATCAGTGCCAGTATCTGTATTACCTGTGAAGGCCTCCAAGAATTCTCCGTTTGGTTGTaGGTTGCCTTGTGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: ILITISASICITCEGLQEFSVWL*VALWVL
Trigger: CAGAACCCACAAGGCAACCAACAACCAAACGGAGAA...TTCTTGGAGGCCTTCACAGGTAATACAGATACTGGCACTGATTGTAATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp GAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTTCCTTTTTCTCCGTTaGGTTGTTGGTTGCCTTGTG +
Preference number: 5 (lower is better)
Translates to: EIQHKHVVKTVPEDALEFFLFLR*VVGCLV
Trigger: CACAAGGCAACCAACAACCAAACGGAGAAAAAGGAA...AAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CATCAGTTCCTGCATTGGCTCCAATATTACACACAACCTGAGGTAGTTGAGGGTATTGGTCTTAAATTCTaGGTTCTGTATCGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: HQFLHWLQYYTQPEVVEGIGLKF*VLYRFG
Trigger: ACCAAAGCGATACAGAACCAAGAATTTAAGACCAAT...ACCCTCAACTACCTCAGGTTGTGTGTAATATTGGAGCCAATGCAGGAACTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512345.5
CDS-3UTR CAA 90 bp AAGGAAATTCAACACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGGTAAAGTGCCATGTTTaGATTCTCATGAGATCATCA +
Preference number: 5 (lower is better)
Translates to: KEIQHKHVVKTVPEDALEVKCHV*ILMRSS
Trigger: TGATGATCTCATGAGAATCAAAACATGGCACTTTAC...CTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTGTTGAATTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp CACAAACACGTTGTTAAAACCGTGCCAGAAGATGCGCTAGAGTTTTCTCTCATTGTAAAGTGCCATGTTTaGATTCTCATGAGATCATCA +
Preference number: 5 (lower is better)
Translates to: HKHVVKTVPEDALEFSLIVKCHV*ILMRSS
Trigger: TGATGATCTCATGAGAATCAAAACATGGCACTTTAC...AATGAGAGAAAACTCTAGCGCATCTTCTGGCACGGTTTTAACAACGTGTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000507464.5
ENST00000515064.5
CDS-3UTR CAA 90 bp AAAGAAAGGATGGTCAACTCAGGTACAATTAGAAAACACACAAAGGTTCAGGTTTTCCTTTTTCTCCGTTaGGTTGTTGGTTGCCTTGTG +
Preference number: 5 (lower is better)
Translates to: KERMVNSGTIRKHTKVQVFLFLR*VVGCLV
Trigger: CACAAGGCAACCAACAACCAAACGGAGAAAAAGGAA...AACCTGAACCTTTGTGTGTTTTCTAATTGTACCTGAGTTGACCATCCTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000515064.5
CDS TCA 90 bp CTGAATACCAATGATAAATCCAAACTTGTAGAATTACAGTGCAGATaGAATTCAATGGTATTTATGCATGCACCAGATCCAGGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LNTNDKSKLVELQCR*NSMVFMHAPDPGRC
Trigger: GCACCTGCCTGGATCTGGTGCATGCATAAATACCATTGAATTTCATCTGCACTGTAATTCTACAAGTTTGGATTTATCATTGGTATTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504886.5
CDS-3UTR CAA 90 bp ATCATCAAAGGTGAACTCCAAGATCAGTCTGCCTTCTGTACATACCTTGGTAAAGTAAAGTGCCATGTTTaGATTCTCATGAGATCATCA +
Preference number: 5 (lower is better)
Translates to: IIKGELQDQSAFCTYLGKVKCHV*ILMRSS
Trigger: TGATGATCTCATGAGAATCAAAACATGGCACTTTAC...TTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508918.5
ENST00000512345.5
CDS TCA 72 bp CTGTTGAATGACACAGGTCTCCATCCCTCCCAGGGTTaGGGCTGCAGTTCGGGATCGCTCCTAGCCCCTGCT +
Preference number: 6 (lower is better)
Translates to: LLNDTGLHPSQG*GCSSGSLLAPA
Trigger: AGCAGGGGCTAGGAGCGATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509803.1
CDS TCA 72 bp CTGTTGAATGACACAGGTCTCCATCCCTCCCAGGGTTaGGGCTGCAGTTCGGGATCGCTCCTAGCCCAGGTA +
Preference number: 6 (lower is better)
Translates to: LLNDTGLHPSQG*GCSSGSLLAQV
Trigger: TACCTGGGCTAGGAGCGATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS CAA 72 bp CCATCACAGGCATCTGGTTCCGAATCCCCGAGCTGGTaGCAGTTTCCTCTGGCATCTGCCGCTGAATGCACA +
Preference number: 6 (lower is better)
Translates to: PSQASGSESPSW*QFPLASAAECT
Trigger: TGTGCATTCAGCGGCAGATGCCAGAGGAAACTGCAACCAGCTCGGGGATTCGGAACCAGATGCCTGTGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS CCA 72 bp AATCCATCACAGGCATCTGGTTCCGAATCCCCGAGCTaGTTGCAGTTTCCTCTGGCATCTGCCGCTGAATGC +
Preference number: 6 (lower is better)
Translates to: NPSQASGSESPS*LQFPLASAAEC
Trigger: GCATTCAGCGGCAGATGCCAGAGGAAACTGCAACCAGCTCGGGGATTCGGAACCAGATGCCTGTGATGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS CAA 72 bp CTCCTAGCCCAGGTACCTGACTGGACAGACTCAGGTTaGCAGCTGTGGTCTTCTTCTTGCTGCCAGTGCTGT +
Preference number: 6 (lower is better)
Translates to: LLAQVPDWTDSG*QLWSSSCCQCC
Trigger: ACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCAGTCAGGTACCTGGGCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS CAA 90 bp TCGGGATCGCTCCTAGCCCAGGTACCTGACTGGACAGACTCAGGTTaGCAGCTGTGGTCTTCTTCTTGCTGCCAGTGCTGTTTGCATTGT +
Preference number: 6 (lower is better)
Translates to: SGSLLAQVPDWTDSG*QLWSSSCCQCCLHC
Trigger: ACAATGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCAGTCAGGTACCTGGGCTAGGAGCGATCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441778.6
CDS TCA 72 bp TCCTTAAATTGGCCAGAAGGGGTCACTGCTGTTGAATaGCACAGGTCTCCATCCCTCCCAGGGTTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SLNWPEGVTAVE*HRSPSLPGLRL
Trigger: CAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCAGTGACCCCTTCTGGCCAATTTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000509803.1
CDS CCA 72 bp ACAGACCACAGCTGTGGTCATAGTGGCACATGCCTTTaGACCAGACAGTGGATGCCTGCAGGTAGCATCTCT +
Preference number: 6 (lower is better)
Translates to: TDHSCGHSGTCL*TRQWMPAGSIS
Trigger: AGAGATGCTACCTGCAGGCATCCACTGTCTGGTCCAAAGGCATGTGCCACTATGACCACAGCTGTGGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509803.1
CDS TCA 72 bp CTTCTCCTTAAATTGGCCAGAAGGGGTCACTGCTGTTaGATGACACAGGTCTCCATCCCTCCCAGGGTTGAG +
Preference number: 6 (lower is better)
Translates to: LLLKLARRGHCC*MTQVSIPPRVE
Trigger: CTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCAGTGACCCCTTCTGGCCAATTTAAGGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441778.6
ENST00000509803.1
CDS GCA 72 bp GGCAGCAAGCCTCTCCTACTGCTTACTGTGAAAGGATaGCAACACCTGGATGGAAACGCTGCAGAAGACAGA +
Preference number: 6 (lower is better)
Translates to: GSKPLLLLTVKG*QHLDGNAAEDR
Trigger: TCTGTCTTCTGCAGCGTTTCCATCCAGGTGTTGGCATCCTTTCACAGTAAGCAGTAGGAGAGGCTTGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503829.5
CDS CAA 72 bp CCATCACATCAGGTACCTGACTGGACAGACTCAGGTTaGCAGCTGTGGTCTTCTTCTTGCTGCCAGTGCTGT +
Preference number: 6 (lower is better)
Translates to: PSHQVPDWTDSG*QLWSSSCCQCC
Trigger: ACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCAGTCAGGTACCTGATGTGATGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304523.10
ENST00000507464.5
CDS CAA 90 bp CTCCTACCACCATCACATCAGGTACCTGACTGGACAGACTCAGGTTaGCAGCTGTGGTCTTCTTCTTGCTGCCAGTGCTGTTTGCATTGT +
Preference number: 6 (lower is better)
Translates to: LLPPSHQVPDWTDSG*QLWSSSCCQCCLHC
Trigger: ACAATGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCAGTCAGGTACCTGATGTGATGGTGGTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304523.10
ENST00000507464.5
CDS CAA 90 bp TGTAATAATCCATCACAGGCATCTGGTTCCGAATCCCCGAGCTGGTaGCAGTTTCCTCTGGCATCTGCCGCTGAATGCACAATGTATCGC +
Preference number: 6 (lower is better)
Translates to: CNNPSQASGSESPSW*QFPLASAAECTMYR
Trigger: GCGATACATTGTGCATTCAGCGGCAGATGCCAGAGGAAACTGCAACCAGCTCGGGGATTCGGAACCAGATGCCTGTGATGGATTATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508918.5
CDS GCA 72 bp GTGGAATTTTTCCTTTTTCTCCGTTTGGTTGTTGGTTaGCTTGTGGGTTCTGGCGGAGCCACCATCCTCTGC +
Preference number: 6 (lower is better)
Translates to: VEFFLFLRLVVG*LVGSGGATILC
Trigger: GCAGAGGATGGTGGCTCCGCCAGAACCCACAAGGCAACCAACAACCAAACGGAGAAAAAGGAAAAATTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507464.5
CDS CCA 72 bp CAGGTACCTGACTGGACAGACTCAGGTTTGCAGCTGTaGTCTTCTTCTTGCTGCCAGTGCTGTTTGCATTGT +
Preference number: 6 (lower is better)
Translates to: QVPDWTDSGLQL*SSSCCQCCLHC
Trigger: ACAATGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCAGTCAGGTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000507464.5
CDS CAA 72 bp GGTGGAATTTTTCCTTTTTCTCCGTTTGGTTGTTGGTaGCCTTGTGGGTTCTGGCGGAGCCACCATCCTCTG +
Preference number: 6 (lower is better)
Translates to: GGIFPFSPFGCW*PCGFWRSHHPL
Trigger: CAGAGGATGGTGGCTCCGCCAGAACCCACAAGGCAACCAACAACCAAACGGAGAAAAAGGAAAAATTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507464.5
CDS CAA 72 bp TGCTGCTGGTGGAATTTTTCCTTTTTCTCCGTTTGGTaGTTGGTTGCCTTGTGGGTTCTGGCGGAGCCACCA +
Preference number: 6 (lower is better)
Translates to: CCWWNFSFFSVW*LVALWVLAEPP
Trigger: TGGTGGCTCCGCCAGAACCCACAAGGCAACCAACAACCAAACGGAGAAAAAGGAAAAATTCCACCAGCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507464.5
CDS CCA 72 bp TCACATCCTGACTGGACAGACTCAGGTTTGCAGCTGTaGTCTTCTTCTTGCTGCCAGTGCTGTTTGCATTGT +
Preference number: 6 (lower is better)
Translates to: SHPDWTDSGLQL*SSSCCQCCLHC
Trigger: ACAATGCAAACAGCACTGGCAGCAAGAAGAAGACCACAGCTGCAAACCTGAGTCTGTCCAGTCAGGATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515064.5
CDS CAA 72 bp CTCATTCCAGTGGACAAGAATGGGAGCCAGACAGCTTaGTTGCTTTGCTGGGTGCACCACGATTTAGGAAAC +
Preference number: 6 (lower is better)
Translates to: LIPVDKNGSQTA*LLCWVHHDLGN
Trigger: GTTTCCTAAATCGTGGTGCACCCAGCAAAGCAACAAAGCTGTCTGGCTCCCATTCTTGTCCACTGGAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503153.5
CDS CCA 72 bp ACCTTAGAATCCTCCTCAATACCATACTCTGAGGGCTaGCAGGAGAGAGAAAATGTCCTTGCCATCCCTAGA +
Preference number: 6 (lower is better)
Translates to: TLESSSIPYSEG*QERENVLAIPR
Trigger: TCTAGGGATGGCAAGGACATTTTCTCTCTCCTGCCAGCCCTCAGAGTATGGTATTGAGGAGGATTCTAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509803.1
CDS TCA 72 bp GGGGATGAGGGTCCTGCCGATAGCTCAAGTGGCTACTaGTTAGATATGGTAACATGTAATGTCCTCATCAGA +
Preference number: 6 (lower is better)
Translates to: GDEGPADSSSGY*LDMVTCNVLIR
Trigger: TCTGATGAGGACATTACATGTTACCATATCTAATCAGTAGCCACTTGAGCTATCGGCAGGACCCTCATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503829.5
CDS CCA 72 bp TGGCTGTACCATGTATGGTGTATGCCTCCTATAAAATaGGCCGAAAGGAGAAGAATAGAAGGGGTCATGTGG +
Preference number: 6 (lower is better)
Translates to: WLYHVWCMPPIK*AERRRIEGVMW
Trigger: CCACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGGCATACACCATACATGGTACAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000508918.5
ENST00000510825.5
ENST00000512345.5
ENST00000515064.5
CDS CAA 72 bp ATTCCAGTGGACAAGAATGGGAGCCAGACAGCTTTGTaGCTTTGCTGGGTGCACCACGATTTAGGAAACAAA +
Preference number: 6 (lower is better)
Translates to: IPVDKNGSQTAL*LCWVHHDLGNK
Trigger: TTTGTTTCCTAAATCGTGGTGCACCCAGCAAAGCAACAAAGCTGTCTGGCTCCCATTCTTGTCCACTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503153.5
CDS CCA 72 bp CATCTCATAGATTCGGTACTCTGGCTGTACCATGTATaGTGTATGCCTCCTATAAAATGGGCCGAAAGGAGA +
Preference number: 6 (lower is better)
Translates to: HLIDSVLWLYHV*CMPPIKWAERR
Trigger: TCTCCTTTCGGCCCATTTTATAGGAGGCATACACCATACATGGTACAGCCAGAGTACCGAATCTATGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304523.10
ENST00000441778.6
ENST00000502640.5
ENST00000508918.5
ENST00000510825.5
ENST00000512345.5
ENST00000515064.5
CDS CAA 90 bp ATCCCTAGATTAGACAGTGAGCTCTTCAATGACAGGGCTTTGTTGTaGTTGTTTTTCACCTTGGTATTGCTAGTACCTGGCACAGTGTGG +
Preference number: 6 (lower is better)
Translates to: IPRLDSELFNDRALL*LFFTLVLLVPGTVW
Trigger: CCACACTGTGCCAGGTACTAGCAATACCAAGGTGAAAAACAACAACAACAAAGCCCTGTCATTGAAGAGCTCACTGTCTAATCTAGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509803.1
CDS CAA 90 bp CTTGCCATCCCTAGATTAGACAGTGAGCTCTTCAATGACAGGGCTTaGTTGTTGTTGTTTTTCACCTTGGTATTGCTAGTACCTGGCACA +
Preference number: 6 (lower is better)
Translates to: LAIPRLDSELFNDRA*LLLFFTLVLLVPGT
Trigger: TGTGCCAGGTACTAGCAATACCAAGGTGAAAAACAACAACAACAAAGCCCTGTCATTGAAGAGCTCACTGTCTAATCTAGGGATGGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509803.1
CDS CAA 72 bp AGTGATGGAATCCAACTCTCATTTCCTAACGGTGCCTaGCTCTTAATCACACAAAATGCAAAGGGTCTCTAC +
Preference number: 6 (lower is better)
Translates to: SDGIQLSFPNGA*LLITQNAKGLY
Trigger: GTAGAGACCCTTTGCATTTTGTGTGATTAAGAGCAAGGCACCGTTAGGAAATGAGAGTTGGATTCCATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509803.1
CDS CAA 90 bp AACGGTGCCTTGCTCTTAATCACACAAAATGCAAAGGGTCTCTACTaGTTACAAACCCTCTGGATACAGGTAACCTCCAGTAAAATACAG +
Preference number: 6 (lower is better)
Translates to: NGALLLITQNAKGLY*LQTLWIQVTSSKIQ
Trigger: CTGTATTTTACTGGAGGTTACCTGTATCCAGAGGGTTTGTAACAAGTAGAGACCCTTTGCATTTTGTGTGATTAAGAGCAAGGCACCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509803.1
CDS CAA 90 bp CCTAGCTCAGAAAGTGGAGGACCACCTGGAGACTATTTTCATTATTaGAAGACTGCAATTTGTAACCTTGTAAAATGTAACATGGCACCT +
Preference number: 6 (lower is better)
Translates to: PSSESGGPPGDYFHY*KTAICNLVKCNMAP
Trigger: AGGTGCCATGTTACATTTTACAAGGTTACAAATTGCAGTCTTCAAATAATGAAAATAGTCTCCAGGTGGTCCTCCACTTTCTGAGCTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509803.1
CDS CAA 72 bp GAAAGTGGAGGACCACCTGGAGACTATTTTCATTATTaGAAGACTGCAATTTGTAACCTTGTAAAATGTAAC +
Preference number: 6 (lower is better)
Translates to: ESGGPPGDYFHY*KTAICNLVKCN
Trigger: GTTACATTTTACAAGGTTACAAATTGCAGTCTTCAAATAATGAAAATAGTCTCCAGGTGGTCCTCCACTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509803.1