RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LCK (Homo sapiens)

Ensembl gene IDs: ENSG00000182866

Ensembl transcript IDs: ENST00000333070.4, ENST00000336890.10, ENST00000355928.7, ENST00000373557.6, ENST00000373562.7, ENST00000373564.7, ENST00000461712.6, ENST00000469765.5, ENST00000469956.1, ENST00000476457.5, ENST00000477031.6, ENST00000482949.5, ENST00000495610.6, ENST00000619559.4

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATaGACAGGCTACACATGTACAAGACATGTGCAGAGTCCACGCAAC +
Preference number: 1 (lower is better)
Translates to: GRARKGYLVQCPRHT*TGYTCTRHVQSPRN
Trigger: GTTGCGTGGACTCTGCACATGTCTTGTACATGTGTAGCCTGTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR GCA 90 bp TGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTaGATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATA +
Preference number: 1 (lower is better)
Translates to: CAESTQLQDTCTDTR*ICVTCGWDSCAESI
Trigger: TATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR GCA 90 bp CATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTaGATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAAG +
Preference number: 1 (lower is better)
Translates to: HMCHMWVGFMCRVHM*IGHVTMAQELHLPK
Trigger: CTTGGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR GCA 90 bp TACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTaGAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAA +
Preference number: 1 (lower is better)
Translates to: YRHKVHMCHMWVGFM*RVHMCIGHVTMAQE
Trigger: TTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR-3UTR CCA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCCCCAAGTCAGGCTaGAGAGAAAGGGGGAGAACC +
Preference number: 2 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPLPKSG*RERGRT
Trigger: GGTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAG...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR-3UTR CCA 90 bp ACTCCTGATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATCTCCCCTCTCTCTGTaGTCTCAGGAAATGGGAGAG +
Preference number: 2 (lower is better)
Translates to: TPDVCQARHQGGAHRGIRSPLSL*SQEMGE
Trigger: CTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGA...TCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACATCAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR-3UTR CCA 90 bp GGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATCTCCCCAAGTCAGGCTaGAGAGAAAGGGGGAGAACC +
Preference number: 2 (lower is better)
Translates to: GAYVSHVGGIHVQSPYVHLPKSG*RERGRT
Trigger: GGTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAG...ATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR-3UTR CCA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGCTCCCCAAGTCAGGCTaGAGAGAAAGGGGGAGAACC +
Preference number: 2 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMLPKSG*RERGRT
Trigger: GGTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAG...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR-3UTR CCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCTCTCCCCTCTCTCTGTaGTCTCAGGAAATGGGAGAG +
Preference number: 2 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVSPLSL*SQEMGE
Trigger: CTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGA...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR-3UTR GCA 90 bp ACTCCTGATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATGCAGAGTCCATATGTaGATAGGCCATGTGACTATG +
Preference number: 2 (lower is better)
Translates to: TPDVCQARHQGGAHRGIRCRVHM*IGHVTM
Trigger: CATAGTCACATGGCCTATGCACATATGGACTCTGCA...TCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACATCAGGAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR-3UTR GCA 90 bp TCAATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGACATGTACAAGACATGTaGAGAGTCCACGCAACTACA +
Preference number: 2 (lower is better)
Translates to: SIPGFSPLSVVSGNGRARHVQDM*RVHATT
Trigger: TGTAGTTGCGTGGACTCTGCACATGTCTTGTACATG...TCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR-3UTR GCA 90 bp AGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCTGGCCCTTTGGGTGGGATTCATGTaGAGAGTCCATATGTGCATA +
Preference number: 2 (lower is better)
Translates to: RPGTKEEHTEVLDKVLALWVGFM*RVHMCI
Trigger: TATGCACATATGGACTCTGCACATGAATCCCACCCA...AAGGGCCAGGACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR-3UTR CCA 90 bp GGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACAGGCCATATGTGTCACATGTaGGTGGGATTCATGTGCAGA +
Preference number: 2 (lower is better)
Translates to: GRARKGYLVQCPRHTCTGHMCHM*VGFMCR
Trigger: TCTGCACATGAATCCCACCCACATGTGACACATATG...GCCTGTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR-3UTR GCA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTTGCAGAGTCCATATGTaGATAGGCCATGTGACTATG +
Preference number: 2 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPCRVHM*IGHVTM
Trigger: CATAGTCACATGGCCTATGCACATATGGACTCTGCA...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR-3UTR GCA 90 bp GAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCTGGGTGGGATTCATGTaGAGAGTCCATATGTGCATA +
Preference number: 2 (lower is better)
Translates to: ERKVGGQKLLSIPGFSPLWVGFM*RVHMCI
Trigger: TATGCACATATGGACTCTGCACATGAATCCCACCCA...GAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR-3UTR GCA 90 bp GACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATTGGGTGGGATTCATGTaGAGAGTCCATATGTGCATA +
Preference number: 2 (lower is better)
Translates to: DMCRVHATTGHVYRHKVHWVGFM*RVHMCI
Trigger: TATGCACATATGGACTCTGCACATGAATCCCACCCA...ATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR-3UTR CCA 90 bp AAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACTGTGTCACATGTGGGTaGGATTCATGTGCAGAGTCC +
Preference number: 2 (lower is better)
Translates to: KWESQKGVPCTVSKTYMHCVTCG*DSCAES
Trigger: GGACTCTGCACATGAATCCCACCCACATGTGACACA...GTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR GCA 72 bp CACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTaGATAGGCCATGTGACTATGGCACAAGAACTCCAT +
Preference number: 3 (lower is better)
Translates to: HMWVGFMCRVHM*IGHVTMAQELH
Trigger: ATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR TCA 72 bp ATAAAGTCCTGGCCCTTGAGGAACTTCTGGATGATCTaGGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTC +
Preference number: 3 (lower is better)
Translates to: IKSWPLRNFWMI*GKKSRWAEASV
Trigger: GACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTCAGATCATCCAGAAGTTCCTCAAGGGCCAGGACTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR GCA 72 bp AAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTaGAGAGTCCATATGTGCATAGGCCATGTGACTATG +
Preference number: 3 (lower is better)
Translates to: KVHMCHMWVGFM*RVHMCIGHVTM
Trigger: CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
3UTR GCA 72 bp AGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATaGACAGGCTACACATGTACAAGACATGTGCAGAGT +
Preference number: 3 (lower is better)
Translates to: RKGYLVQCPRHT*TGYTCTRHVQS
Trigger: ACTCTGCACATGTCTTGTACATGTGTAGCCTGTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp TCAATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAACAGCCCATGGTCCCTaGCCAGCCCGGGAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SIPGFSPLSVVSGNGRARTAHGP*PAREPS
Trigger: AGAGGGCTCCCGGGCTGGGCAGGGACCATGGGCTGT...TCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336890.10
ENST00000373564.7
CDS-3UTR CCA 90 bp TCAATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGATGCAGCCACAGCCCATaGTCCCTGCCCAGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: SIPGFSPLSVVSGNGRARCSHSP*SLPSPG
Trigger: TCCCGGGCTGGGCAGGGACCATGGGCTGTGGCTGCA...TCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336890.10
ENST00000373564.7
CDS-3UTR CCA 90 bp AGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCTGGCCCTTTGCAGCCACAGCCCATaGTCCCTGCCCAGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: RPGTKEEHTEVLDKVLALCSHSP*SLPSPG
Trigger: TCCCGGGCTGGGCAGGGACCATGGGCTGTGGCTGCA...AAGGGCCAGGACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336890.10
ENST00000373564.7
CDS-3UTR CCA 90 bp TCAATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGATGGGGCTTCTGGGTCTaGCAGGGGCGGCTCAACCGT +
Preference number: 4 (lower is better)
Translates to: SIPGFSPLSVVSGNGRARWGFWV*QGRLNR
Trigger: ACGGTTGAGCCGCCCCTGCCAGACCCAGAAGCCCCA...TCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp AGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCTGGCCCTTGGCTTCTGGGGCTTCTaGGTCTGGCAGGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: RPGTKEEHTEVLDKVLALGFWGF*VWQGRL
Trigger: GAGCCGCCCCTGCCAGACCCAGAAGCCCCAGAAGCC...AAGGGCCAGGACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR TCA 90 bp TATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACATGAGGAAGGAGCCGTaGGTGTTCCCGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: YGTRTPSPQVRLERKGENMRKEP*VFPGAR
Trigger: CCTGGCGCCCGGGAACACTCACGGCTCCTTCCTCAT...GTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp TCAATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAGTCCCGGACCGACAGTaGAAACGATCCCGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: SIPGFSPLSVVSGNGRARVPDRQ*KRSRGA
Trigger: AGCACCGCGGGATCGTTTTCACTGTCGGTCCGGGAC...TCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCCCGTGGTCAGGGACTaGGCCTTCCACCACTCGCCG +
Preference number: 4 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVPVVRD*AFHHSP
Trigger: CGGCGAGTGGTGGAAGGCGCAGTCCCTGACCACGGG...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp AGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCTGGCCCTTTGCCTGGGGTCACCTTaGAGTGGGGAAGCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: RPGTKEEHTEVLDKVLALCLGSP*SGEAGG
Trigger: TCCGCCGGCTTCCCCACTGCAAGGTGACCCCAGGCA...AAGGGCCAGGACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373564.7
CDS-3UTR CCA 90 bp ACTCCTGATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGAAGCCCGGGAGCCCTCTaGCCCCATTCACATGGTCCT +
Preference number: 4 (lower is better)
Translates to: TPDVCQARHQGGAHRGIRSPGAL*PHSHGP
Trigger: AGGACCATGTGAATGGGGCCAGAGGGCTCCCGGGCT...TCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACATCAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336890.10
ENST00000373564.7
CDS-3UTR CCA 90 bp AATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAAAAGCCTTCCTGGCCCGTaGTCAGGGACTGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: NPRLLPSLCGLRKWESQKSLPGP*SGTAPS
Trigger: GGAAGGCGCAGTCCCTGACCACGGGCCAGGAAGGCT...TTTCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ACTCCTGATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGAGGGATGAAGCCTTCCTaGCCCGTGGTCAGGGACTGC +
Preference number: 4 (lower is better)
Translates to: TPDVCQARHQGGAHRGIRGMKPS*PVVRDC
Trigger: GCAGTCCCTGACCACGGGCCAGGAAGGCTTCATCCC...TCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACATCAGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp TCAATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAGGGATGAAGCCTTCCTaGCCCGTGGTCAGGGACTGC +
Preference number: 4 (lower is better)
Translates to: SIPGFSPLSVVSGNGRARGMKPS*PVVRDC
Trigger: GCAGTCCCTGACCACGGGCCAGGAAGGCTTCATCCC...TCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCGGCTTCTGGGGCTTCTaGGTCTGGCAGGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: ERKVGGQKLLSIPGFSPLGFWGF*VWQGRL
Trigger: GAGCCGCCCCTGCCAGACCCAGAAGCCCCAGAAGCC...GAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp ACTCCTGATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGAGGGGTCACCTTGCAGTaGGGAAGCCGGCGGATTGGA +
Preference number: 4 (lower is better)
Translates to: TPDVCQARHQGGAHRGIRGVTLQ*GSRRIG
Trigger: TCCAATCCGCCGGCTTCCCCACTGCAAGGTGACCCC...TCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACATCAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373564.7
CDS-3UTR TCA 90 bp TCAATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAGGATGCGGCCGTGGGTaGCAATTTCCGTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SIPGFSPLSVVSGNGRARGCGRG*QFPSAG
Trigger: TCCTGCTGACGGAAATTGTCACCCACGGCCGCATCC...TCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ACTCCTGATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGACGCTCTGCTCCAGGATaGGGAGCTGTTCCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TPDVCQARHQGGAHRGIRRSAPG*GAVPPS
Trigger: AGAAGGGGGAACAGCTCCGCATCCTGGAGCAGAGCG...TCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACATCAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTTGGGGCTTCTGGGTCTaGCAGGGGCGGCTCAACCGT +
Preference number: 4 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPWGFWV*QGRLNR
Trigger: ACGGTTGAGCCGCCCCTGCCAGACCCAGAAGCCCCA...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp AATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAAATCCCACCACGGCTTCTaGGGCTTCTGGGTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: NPRLLPSLCGLRKWESQKSHHGF*GFWVWQ
Trigger: CTGCCAGACCCAGAAGCCCCAGAAGCCGTGGTGGGA...TTTCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp AGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCTGGCCCTTCGGGTTGGTCATCCCTaGGTAAGGGATGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RPGTKEEHTEVLDKVLALRVGHP*VRDAAV
Trigger: CACGGCCGCATCCCTTACCCAGGGATGACCAACCCG...AAGGGCCAGGACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAAACGGGTTGGTCATCCCTaGGTAAGGGATGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: NPRLLPSLCGLRKWESQKRVGHP*VRDAAV
Trigger: CACGGCCGCATCCCTTACCCAGGGATGACCAACCCG...TTTCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp TGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGGTGGGCCGGTCCTCTaGGCGCTCCTTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: CAESTQLQDTCTDTRCICGGPVL*ALLPAQ
Trigger: CTGTGCTGGAAGGAGCGCCCAGAGGACCGGCCCACC...ACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCATGAGGAAGGAGCCGTaGGTGTTCCCGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPMRKEP*VFPGAR
Trigger: CCTGGCGCCCGGGAACACTCACGGCTCCTTCCTCAT...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp TGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTATGAGGAAGGAGCCGTaGGTGTTCCCGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: CAESTQLQDTCTDTRCICMRKEP*VFPGAR
Trigger: CCTGGCGCCCGGGAACACTCACGGCTCCTTCCTCAT...ACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp TATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACCCTCGCTCCAGGTTCTaGATCACCTCCGGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: YGTRTPSPQVRLERKGENPRSRF*ITSGLV
Trigger: GACCAACCCGGAGGTGATTCAGAACCTGGAGCGAGG...GTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTACAGCCCATGGTCCCTaGCCAGCCCGGGAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: VQSPYVHRPCDYGTRTPSTAHGP*PAREPS
Trigger: AGAGGGCTCCCGGGCTGGGCAGGGACCATGGGCTGT...AGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336890.10
ENST00000373564.7
CDS-3UTR GCA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTTCCGGGTGTGAGCTaGAGCCACAGCCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPLPGVS*SHSPWS
Trigger: GGACCATGGGCTGTGGCTGCAGCTCACACCCGGAAG...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCCTTCCGGGTGTGAGCTaGAGCCACAGCCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: ERKVGGQKLLSIPGFSPLLPGVS*SHSPWS
Trigger: GGACCATGGGCTGTGGCTGCAGCTCACACCCGGAAG...GAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATCCCGTGGTCAGGGACTaGGCCTTCCACCACTCGCCG +
Preference number: 4 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHPVVRD*AFHHSP
Trigger: CGGCGAGTGGTGGAAGGCGCAGTCCCTGACCACGGG...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCACCCGTGGTCAGGGACTaGGCCTTCCACCACTCGCCG +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICAPVVRD*AFHHSP
Trigger: CGGCGAGTGGTGGAAGGCGCAGTCCCTGACCACGGG...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp AATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAAACGTCCGGGGACATGCTaGCCTGCTTCAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: NPRLLPSLCGLRKWESQKRPGTC*PASGSS
Trigger: TGAAGAGCCTGAAGCAGGGCAGCATGTCCCCGGACG...TTTCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCAGGCGTCCGGGGACATaGTGCCCTGCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ERKVGGQKLLSIPGFSPLRRPGT*CPASGS
Trigger: AGAGCCTGAAGCAGGGCAGCATGTCCCCGGACGCCT...GAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp TGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCGTTGCTGGCCCAAGTTaGCCCAGGGGGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: CRVHMCIGHVTMAQELHLVAGPS*PRGRPP
Trigger: TGGGGGCCTCCCCCTGGGGCAACTTGGGCCAGCAAC...GAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333070.4
CDS-3UTR CCA 90 bp TCAATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGATTCGTAGGTAACCAGTaGGTCCCGCACCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SIPGFSPLSVVSGNGRARFVGNQ*VPHLRA
Trigger: GGCTCTGAGGTGCGGGACCCACTGGTTACCTACGAA...TCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAGCCTTCCTGGCCCGTaGTCAGGGACTGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPSLPGP*SGTAPS
Trigger: GGAAGGCGCAGTCCCTGACCACGGGCCAGGAAGGCT...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp CGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGCCTTCCTGGCCCGTaGTCAGGGACTGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RVQTQGAYVSHVGGIHVQSLPGP*SGTAPS
Trigger: GGAAGGCGCAGTCCCTGACCACGGGCCAGGAAGGCT...CTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGGCTTCTGGGGCTTCTaGGTCTGGCAGGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMGFWGF*VWQGRL
Trigger: GAGCCGCCCCTGCCAGACCCAGAAGCCCCAGAAGCC...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCTCCCACCACGGCTTCTaGGGCTTCTGGGTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVSHHGF*GFWVWQ
Trigger: CTGCCAGACCCAGAAGCCCCAGAAGCCGTGGTGGGA...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp TATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACGCTTCAGCGTCTCCCTaGGAACCTCCCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: YGTRTPSPQVRLERKGENASASP*EPPTRP
Trigger: AGGACGAGTGGGAGGTTCCCAGGGAGACGCTGAAGC...GTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp GGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACAGGCGCTTCAGCGTCTCCCTaGGAACCTCCCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: GRARKGYLVQCPRHTCTGASASP*EPPTRP
Trigger: AGGACGAGTGGGAGGTTCCCAGGGAGACGCTGAAGC...GCCTGTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCGGGTTGGTCATCCCTaGGTAAGGGATGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVRVGHP*VRDAAV
Trigger: CACGGCCGCATCCCTTACCCAGGGATGACCAACCCG...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGGTGGGCCGGTCCTCTaGGCGCTCCTTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHGGPVL*ALLPAQ
Trigger: CTGTGCTGGAAGGAGCGCCCAGAGGACCGGCCCACC...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGGTGGGCCGGTCCTCTaGGCGCTCCTTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMGGPVL*ALLPAQ
Trigger: CTGTGCTGGAAGGAGCGCCCAGAGGACCGGCCCACC...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCGCAGGTAGTCAAAGGTaGGCCGGTCCTCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVAGSQR*AGPLGA
Trigger: AGCGCCCAGAGGACCGGCCCACCTTTGACTACCTGC...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTGCAGGTAGTCAAAGGTaGGCCGGTCCTCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPAGSQR*AGPLGA
Trigger: AGCGCCCAGAGGACCGGCCCACCTTTGACTACCTGC...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCAGGGAGAACCGAGCTaGGATCGGCAGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPQGEPS*DRQEAW
Trigger: CCAGGCTTCCTGCCGATCCCAGCTCGGTTCTCCCTG...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373564.7
CDS-3UTR TCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCGTCATCTTCCGGGTGTaGGCTGCAGCCACAGCCCAT +
Preference number: 4 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVVIFRV*AAATAH
Trigger: ATGGGCTGTGGCTGCAGCTCACACCCGGAAGATGAC...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCGTCATCTTCCGGGTGTaGGCTGCAGCCACAGCCCAT +
Preference number: 4 (lower is better)
Translates to: ERKVGGQKLLSIPGFSPLVIFRV*AAATAH
Trigger: ATGGGCTGTGGCTGCAGCTCACACCCGGAAGATGAC...GAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCTCTCGCTCTCCCGGATaGGGAAGGAGCCGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVSRSPG*GRSREC
Trigger: ACACTCACGGCTCCTTCCTCATCCGGGAGAGCGAGA...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCTCTCGCTCTCCCGGATaGGGAAGGAGCCGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: ERKVGGQKLLSIPGFSPLSRSPG*GRSREC
Trigger: ACACTCACGGCTCCTTCCTCATCCGGGAGAGCGAGA...GAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCCCTCGCTCCAGGTTCTaGATCACCTCCGGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: ERKVGGQKLLSIPGFSPLPRSRF*ITSGLV
Trigger: GACCAACCCGGAGGTGATTCAGAACCTGGAGCGAGG...GAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATCCTCGCTCCAGGTTCTaGATCACCTCCGGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: DMCRVHATTGHVYRHKVHPRSRF*ITSGLV
Trigger: GACCAACCCGGAGGTGATTCAGAACCTGGAGCGAGG...ATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCAAGGCCTCTCAAGGCTaGGGCTGGTACTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: ERKVGGQKLLSIPGFSPLKASQG*GWYWPS
Trigger: AGAGGGCCAGTACCAGCCTCAGCCTTGAGAGGCCTT...GAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCCTTCCGGGTGTGAGCTaGAGCCACAGCCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPLPGVS*SHSPWS
Trigger: GGACCATGGGCTGTGGCTGCAGCTCACACCCGGAAG...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp TGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTAGGCGTCCGGGGACATaGTGCCCTGCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CAESTQLQDTCTDTRCICRRPGT*CPASGS
Trigger: AGAGCCTGAAGCAGGGCAGCATGTCCCCGGACGCCT...ACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAGGCGTCCGGGGACATaGTGCCCTGCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPRRPGT*CPASGS
Trigger: AGAGCCTGAAGCAGGGCAGCATGTCCCCGGACGCCT...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCTGTCAGGGCGCACCATaGGGTAGCCTCGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPCQGAP*GSLAPG
Trigger: ACCTGGAGCGAGGCTACCGCATGGTGCGCCCTGACA...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAAACAGGTTGTCTTGCAGTaGGGAAGCCGGCGGATTGGA +
Preference number: 4 (lower is better)
Translates to: NPRLLPSLCGLRKWESQKQVVLQ*GSRRIG
Trigger: TCCAATCCGCCGGCTTCCCCACTGCAAGACAACCTG...TTTCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp AAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACAGCCTTCCTGGCCCGTaGTCAGGGACTGCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: KWESQKGVPCTVSKTYMHSLPGP*SGTAPS
Trigger: GGAAGGCGCAGTCCCTGACCACGGGCCAGGAAGGCT...GTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCGGGATGAAGCCTTCCTaGCCCGTGGTCAGGGACTGC +
Preference number: 4 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPGMKPS*PVVRDC
Trigger: GCAGTCCCTGACCACGGGCCAGGAAGGCTTCATCCC...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp TGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTTCCCACCACGGCTTCTaGGGCTTCTGGGTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CAESTQLQDTCTDTRCICSHHGF*GFWVWQ
Trigger: CTGCCAGACCCAGAAGCCCCAGAAGCCGTGGTGGGA...ACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp ACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGGTGGGCCGGTCCTCTaGGCGCTCCTTCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: TRCICVTCGWDSCAESICGGPVL*ALLPAQ
Trigger: CTGTGCTGGAAGGAGCGCCCAGAGGACCGGCCCACC...ACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp CGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGGCAGGTAGTCAAAGGTaGGCCGGTCCTCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: RVQTQGAYVSHVGGIHVQAGSQR*AGPLGA
Trigger: AGCGCCCAGAGGACCGGCCCACCTTTGACTACCTGC...CTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp TGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCTCAGGCCCTGCTGCCTaGGGTCACCTTGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: CRVHMCIGHVTMAQELHLSGPAA*GHLAVG
Trigger: CCCCACTGCAAGGTGACCCCAGGCAGCAGGGCCTGA...GAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373564.7
CDS-3UTR TCA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCGTCATCTTCCGGGTGTaGGCTGCAGCCACAGCCCAT +
Preference number: 4 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPVIFRV*AAATAH
Trigger: ATGGGCTGTGGCTGCAGCTCACACCCGGAAGATGAC...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATTGCGGCTCAGGTTCTTaGAGAACCAGGGTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: DMCRVHATTGHVYRHKVHCGSGS*RTRVRA
Trigger: AGCCCGAACCCTGGTTCTTCAAGAACCTGAGCCGCA...ATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp ACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTATGAGGAAGGAGCCGTaGGTGTTCCCGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: TRCICVTCGWDSCAESICMRKEP*VFPGAR
Trigger: CCTGGCGCCCGGGAACACTCACGGCTCCTTCCTCAT...ACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp TCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGTCCCGGACCGACAGTaGAAACGATCCCGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: STQLQDTCTDTRCICVTCVPDRQ*KRSRGA
Trigger: AGCACCGCGGGATCGTTTTCACTGTCGGTCCGGGAC...ACATGTGACACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGTCCCGGACCGACAGTaGAAACGATCCCGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMVPDRQ*KRSRGA
Trigger: AGCACCGCGGGATCGTTTTCACTGTCGGTCCGGGAC...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp AAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACGTCCCGGACCGACAGTaGAAACGATCCCGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: KWESQKGVPCTVSKTYMHVPDRQ*KRSRGA
Trigger: AGCACCGCGGGATCGTTTTCACTGTCGGTCCGGGAC...GTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp TATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACACAGCCCATGGTCCCTaGGATTGTGAGATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: YGTRTPSPQVRLERKGENTAHGP*DCEILG
Trigger: TCCCAGGATCTCACAATCTCAGGGACCATGGGCTGT...GTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333070.4
ENST00000619559.4
CDS-3UTR GCA 90 bp CGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGCGTCCGGGGACATGCTaGCCTGCTTCAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RVQTQGAYVSHVGGIHVQRPGTC*PASGSS
Trigger: TGAAGAGCCTGAAGCAGGGCAGCATGTCCCCGGACG...CTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGAGGCGTCCGGGGACATaGTGCCCTGCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TRVQTQGAYVSHVGGIHVRRPGT*CPASGS
Trigger: AGAGCCTGAAGCAGGGCAGCATGTCCCCGGACGCCT...CACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp TATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACACCAGCCGCTGGTGTTaGAGCTGCTTCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: YGTRTPSPQVRLERKGENTSRWC*SCFMRL
Trigger: CAACCTCATGAAGCAGCTGCAACACCAGCGGCTGGT...GTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp AATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAAAACCAGCCGCTGGTGTTaGAGCTGCTTCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: NPRLLPSLCGLRKWESQKTSRWC*SCFMRL
Trigger: CAACCTCATGAAGCAGCTGCAACACCAGCGGCTGGT...TTTCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATTGTCAGGGCGCACCATaGGGTAGCCTCGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHCQGAP*GSLAPG
Trigger: ACCTGGAGCGAGGCTACCGCATGGTGCGCCCTGACA...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGTGTCAGGGCGCACCATaGGGTAGCCTCGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TRVQTQGAYVSHVGGIHVCQGAP*GSLAPG
Trigger: ACCTGGAGCGAGGCTACCGCATGGTGCGCCCTGACA...CACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGTGTCAGGGCGCACCATaGGGTAGCCTCGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMCQGAP*GSLAPG
Trigger: ACCTGGAGCGAGGCTACCGCATGGTGCGCCCTGACA...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCTGGCCCCATTCACATaGTCCTCCTGGCCTAACCTG +
Preference number: 4 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVLAPFT*SSWPNL
Trigger: CAGGTTAGGCCAGGAGGACCATGTGAATGGGGCCAG...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336890.10
ENST00000373564.7
CDS-3UTR CCA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTTTCGTAGGTAACCAGTaGGTCCCGCACCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPFVGNQ*VPHLRA
Trigger: GGCTCTGAGGTGCGGGACCCACTGGTTACCTACGAA...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCAGGTTGTCTTGCAGTaGGGAAGCCGGCGGATTGGA +
Preference number: 4 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVQVVLQ*GSRRIG
Trigger: TCCAATCCGCCGGCTTCCCCACTGCAAGACAACCTG...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp ACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGGGGATGAAGCCTTCCTaGCCCGTGGTCAGGGACTGC +
Preference number: 4 (lower is better)
Translates to: TRVQTQGAYVSHVGGIHVGMKPS*PVVRDC
Trigger: GCAGTCCCTGACCACGGGCCAGGAAGGCTTCATCCC...CACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp TGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTACCTCTCCCTGGTTCTaGTCGAAGTCCCGGACCGAC +
Preference number: 4 (lower is better)
Translates to: CAESTQLQDTCTDTRCICTSPWF*SKSRTD
Trigger: GTCGGTCCGGGACTTCGACCAGAACCAGGGAGAGGT...ACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCTTCACCACCTCTCCCTaGTTCTGGTCGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVFTTSP*FWSKSR
Trigger: CCGGGACTTCGACCAGAACCAGGGAGAGGTGGTGAA...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGCGGGTTGGTCATCCCTaGGTAAGGGATGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMRVGHP*VRDAAV
Trigger: CACGGCCGCATCCCTTACCCAGGGATGACCAACCCG...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACAGGCGAATCACCTCCGGGTTaGTCATCCCTGGGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: GRARKGYLVQCPRHTCTGESPPG*SSLGKG
Trigger: TCCCTTACCCAGGGATGACCAACCCGGAGGTGATTC...GCCTGTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp TATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACTTGGTACAGCTCCTCTaGACAGTTGTCAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: YGTRTPSPQVRLERKGENLVQLL*TVVRAH
Trigger: GTGCGCCCTGACAACTGTCCAGAGGAGCTGTACCAA...GTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp TGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGATCGGCAGGAAGCCTaGAGTTACAGGGTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: CAESTQLQDTCTDTRCICDRQEA*SYRVGD
Trigger: GTCCCCCACCCTGTAACTCCAGGCTTCCTGCCGATC...ACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373564.7
CDS-3UTR TCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCAGTCATCTTCCGGGTGTaGGCTGCAGCCACAGCCCAT +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICAVIFRV*AAATAH
Trigger: ATGGGCTGTGGCTGCAGCTCACACCCGGAAGATGAC...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATTCTCGCTCTCCCGGATaGGGAAGGAGCCGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: GAYVSHVGGIHVQSPYVHSRSPG*GRSREC
Trigger: ACACTCACGGCTCCTTCCTCATCCGGGAGAGCGAGA...ATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTGCAGGCCGGGAAAAGTaGTTCGAGGGGAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPAGREK*FEGRCR
Trigger: TCTACATCTCCCCTCGAATCACTTTTCCCGGCCTGC...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGGATGCGGCCGTGGGTaGCAATTTCCGTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMGCGRG*QFPSAG
Trigger: TCCTGCTGACGGAAATTGTCACCCACGGCCGCATCC...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp ACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGGGATGCGGCCGTGGGTaGCAATTTCCGTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TRVQTQGAYVSHVGGIHVGCGRG*QFPSAG
Trigger: TCCTGCTGACGGAAATTGTCACCCACGGCCGCATCC...CACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp AAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACGGATGCGGCCGTGGGTaGCAATTTCCGTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: KWESQKGVPCTVSKTYMHGCGRG*QFPSAG
Trigger: TCCTGCTGACGGAAATTGTCACCCACGGCCGCATCC...GTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATCCTCGCTCCAGGTTCTaGATCACCTCCGGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHPRSRF*ITSGLV
Trigger: GACCAACCCGGAGGTGATTCAGAACCTGGAGCGAGG...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAAGGCCTCTCAAGGCTaGGGCTGGTACTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GAYVSHVGGIHVQSPYVHKASQG*GWYWPS
Trigger: AGAGGGCCAGTACCAGCCTCAGCCTTGAGAGGCCTT...ATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCAAAGGCCTCTCAAGGCTaGGGCTGGTACTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICAKASQG*GWYWPS
Trigger: AGAGGGCCAGTACCAGCCTCAGCCTTGAGAGGCCTT...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp ACTCCTGATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGACATTTATTGAACTCCTaGTGTGTGCCAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TPDVCQARHQGGAHRGIRHLLNS*CVPGQA
Trigger: TGCCTGGCCTGGCACACATCAGGAGTTCAATAAATG...TCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACATCAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp AAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACCGCTCTGCTCCAGGATaGGGAGCTGTTCCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KWESQKGVPCTVSKTYMHRSAPG*GAVPPS
Trigger: AGAAGGGGGAACAGCTCCGCATCCTGGAGCAGAGCG...GTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp TCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGTCACATGTCGCTCTGCTCCAGGATaGGGAGCTGTTCCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: STQLQDTCTDTRCICVTCRSAPG*GAVPPS
Trigger: AGAAGGGGGAACAGCTCCGCATCCTGGAGCAGAGCG...ACATGTGACACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCGCTCTGCTCCAGGATaGGGAGCTGTTCCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VQSPYVHRPCDYGTRTPSRSAPG*GAVPPS
Trigger: AGAAGGGGGAACAGCTCCGCATCCTGGAGCAGAGCG...AGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACAGGCTGGCGGACCAGTTCATaGAGGCCGGGAAAAGTGATT +
Preference number: 4 (lower is better)
Translates to: GRARKGYLVQCPRHTCTGWRTSS*RPGKVI
Trigger: AATCACTTTTCCCGGCCTGCATGAACTGGTCCGCCA...GCCTGTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp AAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACCGTCCGGGGACATGCTaGCCTGCTTCAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KWESQKGVPCTVSKTYMHRPGTC*PASGSS
Trigger: TGAAGAGCCTGAAGCAGGGCAGCATGTCCCCGGACG...GTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATCGTCCGGGGACATGCTaGCCTGCTTCAGGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHRPGTC*PASGSS
Trigger: TGAAGAGCCTGAAGCAGGGCAGCATGTCCCCGGACG...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCAGTCCTCCAGCACACTaGGCAGGTAGTCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: ERKVGGQKLLSIPGFSPLSPPAH*AGSQRW
Trigger: CCACCTTTGACTACCTGCGCAGTGTGCTGGAGGACT...GAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp TGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGGCAGAAGCAAGAGTTaGTGGCCCAAGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: CAESTQLQDTCTDTRCICGRSKS*WPKLPQ
Trigger: CTGGGGCAACTTGGGCCAGCAACTCTTGCTTCTGCC...ACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333070.4
CDS-3UTR CCA 90 bp GTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTACCTCTCCCTGGTTCTaGTCGAAGTCCCGGACCGAC +
Preference number: 4 (lower is better)
Translates to: VQSPYVHRPCDYGTRTPSTSPWF*SKSRTD
Trigger: GTCGGTCCGGGACTTCGACCAGAACCAGGGAGAGGT...AGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATACCTCTCCCTGGTTCTaGTCGAAGTCCCGGACCGAC +
Preference number: 4 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHTSPWF*SKSRTD
Trigger: GTCGGTCCGGGACTTCGACCAGAACCAGGGAGAGGT...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCAACCTCTCCCTGGTTCTaGTCGAAGTCCCGGACCGAC +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICATSPWF*SKSRTD
Trigger: GTCGGTCCGGGACTTCGACCAGAACCAGGGAGAGGT...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCTTCAGCGTCTCCCTaGGAACCTCCCACTCGTCCT +
Preference number: 4 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMASASP*EPPTRP
Trigger: AGGACGAGTGGGAGGTTCCCAGGGAGACGCTGAAGC...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTGAATCACCTCCGGGTTaGTCATCCCTGGGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPESPPG*SSLGKG
Trigger: TCCCTTACCCAGGGATGACCAACCCGGAGGTGATTC...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATTTGGTACAGCTCCTCTaGACAGTTGTCAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: DMCRVHATTGHVYRHKVHLVQLL*TVVRAH
Trigger: GTGCGCCCTGACAACTGTCCAGAGGAGCTGTACCAA...ATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAAACACAGCCTCATGAGTTaGTACAGCTCCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: NPRLLPSLCGLRKWESQKHSLMS*YSSSGQ
Trigger: CTGTCCAGAGGAGCTGTACCAACTCATGAGGCTGTG...TTTCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCAGGTAGTCAAAGGTaGGCCGGTCCTCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: TRCICVTCGWDSCAESICAGSQR*AGPLGA
Trigger: AGCGCCCAGAGGACCGGCCCACCTTTGACTACCTGC...ACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp TGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTAGAAGCAAGAGTTGCTaGCCCAAGTTGCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CAESTQLQDTCTDTRCICRSKSC*PKLPQG
Trigger: CCCCTGGGGCAACTTGGGCCAGCAACTCTTGCTTCT...ACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333070.4
CDS-3UTR TCA 90 bp ACTCCTGATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGAGGTCAACTTGATGCCTaGAGGGGTCTTGAGAAAATC +
Preference number: 4 (lower is better)
Translates to: TPDVCQARHQGGAHRGIRGQLDA*RGLEKI
Trigger: GATTTTCTCAAGACCCCTTCAGGCATCAAGTTGACC...TCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACATCAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp ACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTAAGGCCTCTCAAGGCTaGGGCTGGTACTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TRCICVTCGWDSCAESICKASQG*GWYWPS
Trigger: AGAGGGCCAGTACCAGCCTCAGCCTTGAGAGGCCTT...ACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp CGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGACAGCCCATGGTCCCTaGGATTGTGAGATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RVQTQGAYVSHVGGIHVQTAHGP*DCEILG
Trigger: TCCCAGGATCTCACAATCTCAGGGACCATGGGCTGT...CTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333070.4
ENST00000619559.4
CDS-3UTR TCA 90 bp GGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAACCGGTGCTCCCTCTaGGCCCTCAGGCTACAAGTA +
Preference number: 4 (lower is better)
Translates to: GAYVSHVGGIHVQSPYVHNRCSL*ALRLQV
Trigger: TACTTGTAGCCTGAGGGCTCAGAGGGAGCACCGGTT...ATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619559.4
CDS-3UTR GCA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATCGCTGGTGTTGCAGCTaGTTCATGAGGTTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHRWCCS*FMRLAS
Trigger: CGAGGCCAACCTCATGAAGCAGCTGCAACACCAGCG...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCGCTGGTGTTGCAGCTaGTTCATGAGGTTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VQTQGAYVSHVGGIHVQSRWCCS*FMRLAS
Trigger: CGAGGCCAACCTCATGAAGCAGCTGCAACACCAGCG...ACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTTCTTTCAGGCCCTGCTaGCTGGGGTCACCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: VQTQGAYVSHVGGIHVQSSFRPC*LGSPCS
Trigger: ACTGCAAGGTGACCCCAGGCAGCAGGGCCTGAAAGA...ACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373564.7
CDS-3UTR CCA 90 bp AGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAACCTAACCTGGCTGCCTaGACAGTCTCAGCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SPYVHRPCDYGTRTPSPQPNLAA*TVSAPF
Trigger: GAAGGGAGCTGAGACTGTCCAGGCAGCCAGGTTAGG...TTGGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336890.10
ENST00000373564.7
CDS-3UTR CCA 90 bp AAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACCCTAACCTGGCTGCCTaGACAGTCTCAGCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: KWESQKGVPCTVSKTYMHPNLAA*TVSAPF
Trigger: GAAGGGAGCTGAGACTGTCCAGGCAGCCAGGTTAGG...GTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336890.10
ENST00000373564.7
CDS-3UTR CCA 90 bp GGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATCTGGCCCCATTCACATaGTCCTCCTGGCCTAACCTG +
Preference number: 4 (lower is better)
Translates to: GAYVSHVGGIHVQSPYVHLAPFT*SSWPNL
Trigger: CAGGTTAGGCCAGGAGGACCATGTGAATGGGGCCAG...ATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336890.10
ENST00000373564.7
CDS-3UTR CCA 90 bp GGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATTTCGTAGGTAACCAGTaGGTCCCGCACCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GAYVSHVGGIHVQSPYVHFVGNQ*VPHLRA
Trigger: GGCTCTGAGGTGCGGGACCCACTGGTTACCTACGAA...ATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCAGGTTGTCTTGCAGTaGGGAAGCCGGCGGATTGGA +
Preference number: 4 (lower is better)
Translates to: VQSPYVHRPCDYGTRTPSQVVLQ*GSRRIG
Trigger: TCCAATCCGCCGGCTTCCCCACTGCAAGACAACCTG...AGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATTTCACCACCTCTCCCTaGTTCTGGTCGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHFTTSP*FWSKSR
Trigger: CCGGGACTTCGACCAGAACCAGGGAGAGGTGGTGAA...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATTCACCACCTCTCCCTaGTTCTGGTCGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICAFTTSP*FWSKSR
Trigger: CCGGGACTTCGACCAGAACCAGGGAGAGGTGGTGAA...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTAGCCGAACCAGCCGCTaGTGTTGCAGCTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: DTCTDTRCICVTCGWDSCSRTSR*CCSCFM
Trigger: CATGAAGCAGCTGCAACACCAGCGGCTGGTTCGGCT...ACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAAAGCCGAACCAGCCGCTaGTGTTGCAGCTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: SPYVHRPCDYGTRTPSPQSRTSR*CCSCFM
Trigger: CATGAAGCAGCTGCAACACCAGCGGCTGGTTCGGCT...TTGGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCAAGCCGAACCAGCCGCTaGTGTTGCAGCTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICASRTSR*CCSCFM
Trigger: CATGAAGCAGCTGCAACACCAGCGGCTGGTTCGGCT...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACAGCCGAACCAGCCGCTaGTGTTGCAGCTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: KWESQKGVPCTVSKTYMHSRTSR*CCSCFM
Trigger: CATGAAGCAGCTGCAACACCAGCGGCTGGTTCGGCT...GTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTCTCCCCAAGTCAGGCTaGAGAGAAAGGGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: DTCTDTRCICVTCGWDSCLPKSG*RERGRT
Trigger: GGTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAG...ACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCACTCCCCAAGTCAGGCTaGAGAGAAAGGGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICALPKSG*RERGRT
Trigger: GGTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAG...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATTCTCCCCTCTCTCTGTaGTCTCAGGAAATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: DMCRVHATTGHVYRHKVHSPLSL*SQEMGE
Trigger: CTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGA...ATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCGAGATTGTGAGATCCTaGGATCCCCATTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: ERKVGGQKLLSIPGFSPLEIVRS*DPHSPA
Trigger: GGCTGGTGAATGGGGATCCCAGGATCTCACAATCTC...GAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333070.4
ENST00000619559.4
CDS-3UTR CCA 90 bp GTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCGGGGAGAAAGTAGGTaGGGGAGAGGTGGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: VQTQGAYVSHVGGIHVQSRGESR*GRGGSQ
Trigger: TTGGCTTCCACCTCTCCCCCACCTACTTTCTCCCCG...ACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373564.7
CDS-3UTR TCA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGCAGGCCGGGAAAAGTaGTTCGAGGGGAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHAGREK*FEGRCR
Trigger: TCTACATCTCCCCTCGAATCACTTTTCCCGGCCTGC...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTGCAGGCCGGGAAAAGTaGTTCGAGGGGAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: VQTQGAYVSHVGGIHVQSAGREK*FEGRCR
Trigger: TCTACATCTCCCCTCGAATCACTTTTCCCGGCCTGC...ACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATTGCCTGAAGGGGTCTTaGGAAAATCCACTAGACTCC +
Preference number: 4 (lower is better)
Translates to: DMCRVHATTGHVYRHKVHCLKGS*ENPLDS
Trigger: GGAGTCTAGTGGATTTTCTCAAGACCCCTTCAGGCA...ATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp TATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACGGTCAACTTGATGCCTaGAGGGGTCTTGAGAAAATC +
Preference number: 4 (lower is better)
Translates to: YGTRTPSPQVRLERKGENGQLDA*RGLEKI
Trigger: GATTTTCTCAAGACCCCTTCAGGCATCAAGTTGACC...GTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCATTTATTGAACTCCTaGTGTGTGCCAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPHLLNS*CVPGQA
Trigger: TGCCTGGCCTGGCACACATCAGGAGTTCAATAAATG...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp TCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGTCACATGTATAACCAGGTTGTCTTaGAGTGGGGAAGCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: STQLQDTCTDTRCICVTCITRLS*SGEAGG
Trigger: TCCGCCGGCTTCCCCACTGCAAGACAACCTGGTTAT...ACATGTGACACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR GCA 90 bp GTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTATAACCAGGTTGTCTTaGAGTGGGGAAGCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: VQSPYVHRPCDYGTRTPSITRLS*SGEAGG
Trigger: TCCGCCGGCTTCCCCACTGCAAGACAACCTGGTTAT...AGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR GCA 90 bp AAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACATAACCAGGTTGTCTTaGAGTGGGGAAGCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: KWESQKGVPCTVSKTYMHITRLS*SGEAGG
Trigger: TCCGCCGGCTTCCCCACTGCAAGACAACCTGGTTAT...GTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR GCA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCTGGCGGACCAGTTCATaGAGGCCGGGAAAAGTGATT +
Preference number: 4 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPWRTSS*RPGKVI
Trigger: AATCACTTTTCCCGGCCTGCATGAACTGGTCCGCCA...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTACCAGCCGCTGGTGTTaGAGCTGCTTCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VQSPYVHRPCDYGTRTPSTSRWC*SCFMRL
Trigger: CAACCTCATGAAGCAGCTGCAACACCAGCGGCTGGT...AGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp TCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGTCACATGTAGTCCTCCAGCACACTaGGCAGGTAGTCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: STQLQDTCTDTRCICVTCSPPAH*AGSQRW
Trigger: CCACCTTTGACTACCTGCGCAGTGTGCTGGAGGACT...ACATGTGACACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGTCCTCCAGCACACTaGGCAGGTAGTCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GAYVSHVGGIHVQSPYVHSPPAH*AGSQRW
Trigger: CCACCTTTGACTACCTGCGCAGTGTGCTGGAGGACT...ATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCAAGTCCTCCAGCACACTaGGCAGGTAGTCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICASPPAH*AGSQRW
Trigger: CCACCTTTGACTACCTGCGCAGTGTGCTGGAGGACT...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTTTCACCACCTCTCCCTaGTTCTGGTCGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: TRCICVTCGWDSCAESICFTTSP*FWSKSR
Trigger: CCGGGACTTCGACCAGAACCAGGGAGAGGTGGTGAA...ACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTATGCCTTCTGCAATTTaGGCTGCCATGTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPMPSAI*AAMSRS
Trigger: ACTCCTGGACATGGCAGCCCAAATTGCAGAAGGCAT...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGAATCACCTCCGGGTTaGTCATCCCTGGGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: DTCTDTRCICVTCGWDSCESPPG*SSLGKG
Trigger: TCCCTTACCCAGGGATGACCAACCCGGAGGTGATTC...ACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACTTGGTACAGCTCCTCTaGACAGTTGTCAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: KWESQKGVPCTVSKTYMHLVQLL*TVVRAH
Trigger: GTGCGCCCTGACAACTGTCCAGAGGAGCTGTACCAA...GTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTTTGGTACAGCTCCTCTaGACAGTTGTCAGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: DTCTDTRCICVTCGWDSCLVQLL*TVVRAH
Trigger: GTGCGCCCTGACAACTGTCCAGAGGAGCTGTACCAA...ACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATTGTGTCACATGTGGGTaGGATTCATGTGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: DMCRVHATTGHVYRHKVHCVTCG*DSCAES
Trigger: GGACTCTGCACATGAATCCCACCCACATGTGACACA...ATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp TGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTTGCCTGAAGGGGTCTTaGGAAAATCCACTAGACTCC +
Preference number: 4 (lower is better)
Translates to: CAESTQLQDTCTDTRCICCLKGS*ENPLDS
Trigger: GGAGTCTAGTGGATTTTCTCAAGACCCCTTCAGGCA...ACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp CGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGTGCCTGAAGGGGTCTTaGGAAAATCCACTAGACTCC +
Preference number: 4 (lower is better)
Translates to: RVQTQGAYVSHVGGIHVQCLKGS*ENPLDS
Trigger: GGAGTCTAGTGGATTTTCTCAAGACCCCTTCAGGCA...CTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGTGGCGGACCAGTTCATaGAGGCCGGGAAAAGTGATT +
Preference number: 4 (lower is better)
Translates to: TRVQTQGAYVSHVGGIHVWRTSS*RPGKVI
Trigger: AATCACTTTTCCCGGCCTGCATGAACTGGTCCGCCA...CACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATTGGCGGACCAGTTCATaGAGGCCGGGAAAAGTGATT +
Preference number: 4 (lower is better)
Translates to: GAYVSHVGGIHVQSPYVHWRTSS*RPGKVI
Trigger: AATCACTTTTCCCGGCCTGCATGAACTGGTCCGCCA...ATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTACCAGCCGCTGGTGTTaGAGCTGCTTCATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TRCICVTCGWDSCAESICTSRWC*SCFMRL
Trigger: CAACCTCATGAAGCAGCTGCAACACCAGCGGCTGGT...ACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACAGGCTTCTGCAATTTGGGCTaGCATGTCCAGGAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: GRARKGYLVQCPRHTCTGFCNLG*HVQEFV
Trigger: AACAAACTCCTGGACATGGCAGCCCAAATTGCAGAA...GCCTGTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCAAAGTCTGCAATCTTaGAGCTCAGGGTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVQSLQS*SSGCQT
Trigger: TGTCTGACACCCTGAGCTGCAAGATTGCAGACTTTG...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp TATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACTGCAGAGTCCATATGTaGATAGGCCATGTGACTATG +
Preference number: 4 (lower is better)
Translates to: YGTRTPSPQVRLERKGENCRVHM*IGHVTM
Trigger: CATAGTCACATGGCCTATGCACATATGGACTCTGCA...GTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp AATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAAATGGGTGGGATTCATGTaGAGAGTCCATATGTGCATA +
Preference number: 4 (lower is better)
Translates to: NPRLLPSLCGLRKWESQKWVGFM*RVHMCI
Trigger: TATGCACATATGGACTCTGCACATGAATCCCACCCA...TTTCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp AATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAAACATGTACAAGACATGTaGAGAGTCCACGCAACTACA +
Preference number: 4 (lower is better)
Translates to: NPRLLPSLCGLRKWESQKHVQDM*RVHATT
Trigger: TGTAGTTGCGTGGACTCTGCACATGTCTTGTACATG...TTTCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTGCCCTTGCCATCCAGTaGGACTATGGGATAATGGCA +
Preference number: 4 (lower is better)
Translates to: VQSPYVHRPCDYGTRTPSALAIQ*DYGIMA
Trigger: TGCCATTATCCCATAGTCCCACTGGATGGCAAGGGC...AGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGCCCTTGCCATCCAGTaGGACTATGGGATAATGGCA +
Preference number: 4 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHALAIQ*DYGIMA
Trigger: TGCCATTATCCCATAGTCCCACTGGATGGCAAGGGC...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTGCCCTTGCCATCCAGTaGGACTATGGGATAATGGCA +
Preference number: 4 (lower is better)
Translates to: VQTQGAYVSHVGGIHVQSALAIQ*DYGIMA
Trigger: TGCCATTATCCCATAGTCCCACTGGATGGCAAGGGC...ACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCATGCCTTCTGCAATTTaGGCTGCCATGTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPMPSAI*AAMSRS
Trigger: ACTCCTGGACATGGCAGCCCAAATTGCAGAAGGCAT...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACCACAGCCTCATGAGTTaGTACAGCTCCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: KWESQKGVPCTVSKTYMHHSLMS*YSSSGQ
Trigger: CTGTCCAGAGGAGCTGTACCAACTCATGAGGCTGTG...GTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCACACAGCCTCATGAGTTaGTACAGCTCCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICAHSLMS*YSSSGQ
Trigger: CTGTCCAGAGGAGCTGTACCAACTCATGAGGCTGTG...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGCACAGCCTCATGAGTTaGTACAGCTCCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMHSLMS*YSSSGQ
Trigger: CTGTCCAGAGGAGCTGTACCAACTCATGAGGCTGTG...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp TGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTTGTGTCACATGTGGGTaGGATTCATGTGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: CAESTQLQDTCTDTRCICCVTCG*DSCAES
Trigger: GGACTCTGCACATGAATCCCACCCACATGTGACACA...ACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATTCTCCCCTCTCTCTGTaGTCTCAGGAAATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHSPLSL*SQEMGE
Trigger: CTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGA...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATCTCCCCTCTCTCTGTaGTCTCAGGAAATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICASPLSL*SQEMGE
Trigger: CTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGA...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACTCTCCCCTCTCTCTGTaGTCTCAGGAAATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KWESQKGVPCTVSKTYMHSPLSL*SQEMGE
Trigger: CTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGA...GTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ACTCCTGATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGAGGAAAGAAAAGTAGGTaGGCAGAAGCTTCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: TPDVCQARHQGGAHRGIRGKKSR*AEASVN
Trigger: ATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCC...TCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACATCAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAAGAGATTGTGAGATCCTaGGATCCCCATTCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SPYVHRPCDYGTRTPSPQEIVRS*DPHSPA
Trigger: GGCTGGTGAATGGGGATCCCAGGATCTCACAATCTC...TTGGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333070.4
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCCTTTCTCCTCCAACTaGGAGTCTAGAAGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVPFSSN*ESRSVS
Trigger: TGACACACTTCTAGACTCCCAGTTGGAGGAGAAAGG...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333070.4
CDS-3UTR CCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCAGCCCGTTGTAGTACCTaGTGTAATGGCGGACCAGTT +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICAARCST*CNGGPV
Trigger: AACTGGTCCGCCATTACACCAGGTACTACAACGGGC...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373564.7
CDS-3UTR TCA 90 bp AGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAATGCCTGAAGGGGTCTTaGGAAAATCCACTAGACTCC +
Preference number: 4 (lower is better)
Translates to: SPYVHRPCDYGTRTPSPQCLKGS*ENPLDS
Trigger: GGAGTCTAGTGGATTTTCTCAAGACCCCTTCAGGCA...TTGGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCAATTCCGCTCTTCAATaGATGCCATGCCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVNSALQ*MPCLLQ
Trigger: TTGCAGAAGGCATGGCATTCATTGAAGAGCGGAATT...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp AGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAACATTTATTGAACTCCTaGTGTGTGCCAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPYVHRPCDYGTRTPSPQHLLNS*CVPGQA
Trigger: TGCCTGGCCTGGCACACATCAGGAGTTCAATAAATG...TTGGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp TCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGTCACATGTCATTTATTGAACTCCTaGTGTGTGCCAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: STQLQDTCTDTRCICVTCHLLNS*CVPGQA
Trigger: TGCCTGGCCTGGCACACATCAGGAGTTCAATAAATG...ACATGTGACACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp AATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAAATCAACAGACATTTATTaGACTCCTGATGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: NPRLLPSLCGLRKWESQKSTDIY*TPDVCQ
Trigger: CTGGCACACATCAGGAGTTCAATAAATGTCTGTTGA...TTTCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTTTCTGCAATTTGGGCTaGCATGTCCAGGAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPFCNLG*HVQEFV
Trigger: AACAAACTCCTGGACATGGCAGCCCAAATTGCAGAA...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCTGGGTGGGATTCATGTaGAGAGTCCATATGTGCATA +
Preference number: 4 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVWVGFM*RVHMCI
Trigger: TATGCACATATGGACTCTGCACATGAATCCCACCCA...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATCATGTACAAGACATGTaGAGAGTCCACGCAACTACA +
Preference number: 4 (lower is better)
Translates to: DMCRVHATTGHVYRHKVHHVQDM*RVHATT
Trigger: TGTAGTTGCGTGGACTCTGCACATGTCTTGTACATG...ATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTGCCCATCTGAAGCATTaGTGTAATGGCGGACCAGTT +
Preference number: 4 (lower is better)
Translates to: VQTQGAYVSHVGGIHVQSAHLKH*CNGGPV
Trigger: AACTGGTCCGCCATTACACCAATGCTTCAGATGGGC...ACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCCCATCTGAAGCATTaGTGTAATGGCGGACCAGTT +
Preference number: 4 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMAHLKH*CNGGPV
Trigger: AACTGGTCCGCCATTACACCAATGCTTCAGATGGGC...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp GACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCCCATCTGAAGCATTaGTGTAATGGCGGACCAGTT +
Preference number: 4 (lower is better)
Translates to: DTCTDTRCICVTCGWDSCAHLKH*CNGGPV
Trigger: AACTGGTCCGCCATTACACCAATGCTTCAGATGGGC...ACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CCA 90 bp GGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATATGCCTTCTGCAATTTaGGCTGCCATGTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GAYVSHVGGIHVQSPYVHMPSAI*AAMSRS
Trigger: ACTCCTGGACATGGCAGCCCAAATTGCAGAAGGCAT...ATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATTGTGTCACATGTGGGTaGGATTCATGTGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: GAYVSHVGGIHVQSPYVHCVTCG*DSCAES
Trigger: GGACTCTGCACATGAATCCCACCCACATGTGACACA...ATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTTGTGTCACATGTGGGTaGGATTCATGTGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: VQTQGAYVSHVGGIHVQSCVTCG*DSCAES
Trigger: GGACTCTGCACATGAATCCCACCCACATGTGACACA...ACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTCCACTAGACTCCCTGTaGGCAGAAGCAAGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: TRCICVTCGWDSCAESICPLDSL*AEARVA
Trigger: AGCAACTCTTGCTTCTGCCCACAGGGAGTCTAGTGG...ACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333070.4
CDS-3UTR TCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCAGGTCAACTTGATGCCTaGAGGGGTCTTGAGAAAATC +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICAGQLDA*RGLEKI
Trigger: GATTTTCTCAAGACCCCTTCAGGCATCAAGTTGACC...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATTCAACAGACATTTATTaGACTCCTGATGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: DMCRVHATTGHVYRHKVHSTDIY*TPDVCQ
Trigger: CTGGCACACATCAGGAGTTCAATAAATGTCTGTTGA...ATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAAAGTCTGCAATCTTaGAGCTCAGGGTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: TRVQTQGAYVSHVGGIHVQSLQS*SSGCQT
Trigger: TGTCTGACACCCTGAGCTGCAAGATTGCAGACTTTG...CACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp TCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGTCACATGTCAAAGTCTGCAATCTTaGAGCTCAGGGTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: STQLQDTCTDTRCICVTCQSLQS*SSGCQT
Trigger: TGTCTGACACCCTGAGCTGCAAGATTGCAGACTTTG...ACATGTGACACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGCAAAGTCTGCAATCTTaGAGCTCAGGGTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMQSLQS*SSGCQT
Trigger: TGTCTGACACCCTGAGCTGCAAGATTGCAGACTTTG...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp CGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGTGCAGAGTCCATATGTaGATAGGCCATGTGACTATG +
Preference number: 4 (lower is better)
Translates to: RVQTQGAYVSHVGGIHVQCRVHM*IGHVTM
Trigger: CATAGTCACATGGCCTATGCACATATGGACTCTGCA...CTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp CGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGTGTACAGACACAAGGTaGATATGTGTCACATGTGGG +
Preference number: 4 (lower is better)
Translates to: RVQTQGAYVSHVGGIHVQCTDTR*ICVTCG
Trigger: CCCACATGTGACACATATGCACCTTGTGTCTGTACA...CTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp TGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTTGTACAGACACAAGGTaGATATGTGTCACATGTGGG +
Preference number: 4 (lower is better)
Translates to: CAESTQLQDTCTDTRCICCTDTR*ICVTCG
Trigger: CCCACATGTGACACATATGCACCTTGTGTCTGTACA...ACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTATGCCTTCTGCAATTTaGGCTGCCATGTCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: TRCICVTCGWDSCAESICMPSAI*AAMSRS
Trigger: ACTCCTGGACATGGCAGCCCAAATTGCAGAAGGCAT...ACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCCATATGTGTCACATGTaGGTGGGATTCATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPHMCHM*VGFMCR
Trigger: TCTGCACATGAATCCCACCCACATGTGACACATATG...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp GACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTAATTCCGCTCTTCAATaGATGCCATGCCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: DTCTDTRCICVTCGWDSCNSALQ*MPCLLQ
Trigger: TTGCAGAAGGCATGGCATTCATTGAAGAGCGGAATT...ACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCAAATTCCGCTCTTCAATaGATGCCATGCCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICANSALQ*MPCLLQ
Trigger: TTGCAGAAGGCATGGCATTCATTGAAGAGCGGAATT...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATAATTCCGCTCTTCAATaGATGCCATGCCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHNSALQ*MPCLLQ
Trigger: TTGCAGAAGGCATGGCATTCATTGAAGAGCGGAATT...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGTTCTGCAATTTGGGCTaGCATGTCCAGGAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMFCNLG*HVQEFV
Trigger: AACAAACTCCTGGACATGGCAGCCCAAATTGCAGAA...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTTGCAGAGTCCATATGTaGATAGGCCATGTGACTATG +
Preference number: 4 (lower is better)
Translates to: VQSPYVHRPCDYGTRTPSCRVHM*IGHVTM
Trigger: CATAGTCACATGGCCTATGCACATATGGACTCTGCA...AGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATTGGGTGGGATTCATGTaGAGAGTCCATATGTGCATA +
Preference number: 4 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHWVGFM*RVHMCI
Trigger: TATGCACATATGGACTCTGCACATGAATCCCACCCA...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp GGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATTGGGTGGGATTCATGTaGAGAGTCCATATGTGCATA +
Preference number: 4 (lower is better)
Translates to: GAYVSHVGGIHVQSPYVHWVGFM*RVHMCI
Trigger: TATGCACATATGGACTCTGCACATGAATCCCACCCA...ATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp AAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACTGTACAGACACAAGGTaGATATGTGTCACATGTGGG +
Preference number: 4 (lower is better)
Translates to: KWESQKGVPCTVSKTYMHCTDTR*ICVTCG
Trigger: CCCACATGTGACACATATGCACCTTGTGTCTGTACA...GTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp TGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCATGTACAAGACATGTaGAGAGTCCACGCAACTACA +
Preference number: 4 (lower is better)
Translates to: CRVHMCIGHVTMAQELHLHVQDM*RVHATT
Trigger: TGTAGTTGCGTGGACTCTGCACATGTCTTGTACATG...GAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp GTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCATATGTGTCACATGTaGGTGGGATTCATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VQTQGAYVSHVGGIHVQSHMCHM*VGFMCR
Trigger: TCTGCACATGAATCCCACCCACATGTGACACATATG...ACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp ACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCATATGTGTCACATGTaGGTGGGATTCATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: TRVQTQGAYVSHVGGIHVHMCHM*VGFMCR
Trigger: TCTGCACATGAATCCCACCCACATGTGACACATATG...CACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp CGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGGGAAAGAAAAGTAGGTaGGCAGAAGCTTCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: RVQTQGAYVSHVGGIHVQGKKSR*AEASVN
Trigger: ATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCC...CTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CCA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCGGAAAGAAAAGTAGGTaGGCAGAAGCTTCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPGKKSR*AEASVN
Trigger: ATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCC...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp AGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAATCAACAGACATTTATTaGACTCCTGATGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SPYVHRPCDYGTRTPSPQSTDIY*TPDVCQ
Trigger: CTGGCACACATCAGGAGTTCAATAAATGTCTGTTGA...TTGGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR TCA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATCAACAGACATTTATTaGACTCCTGATGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RCICVTCGWDSCAESICASTDIY*TPDVCQ
Trigger: CTGGCACACATCAGGAGTTCAATAAATGTCTGTTGA...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR GCA 90 bp ACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTTTCTGCAATTTGGGCTaGCATGTCCAGGAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: TRCICVTCGWDSCAESICFCNLG*HVQEFV
Trigger: AACAAACTCCTGGACATGGCAGCCCAAATTGCAGAA...ACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS GCA 90 bp TCCCAAGGGCGGCCACCCCGAGCTGGTCAAGGGCCGCAGGAGGGCTaGGGGTCGCGGAGATCGCCGCTCCCTCACGGACTCCGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: SQGRPPRAGQGPQEG*GSRRSPLPHGLRQS
Trigger: GCTCTGGCGGAGTCCGTGAGGGAGCGGCGATCTCCGCGACCCGCAGCCCTCCTGCGGCCCTTGACCAGCTCGGGGTGGCCGCCCTTGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355928.7
ENST00000476457.5
CDS CCA 90 bp CAGGGACTGCGCCTTCCACCACTCGCCGCTCCTGCGCCACGGAGGTaGGTCAGTGTGGCTCGCTCAGCCGTCGACCTGAGACCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: QGLRLPPLAAPAPRR*VSVARSAVDLRPSL
Trigger: GAGGGAGGGTCTCAGGTCGACGGCTGAGCGAGCCACACTGACCCACCTCCGTGGCGCAGGAGCGGCGAGTGGTGGAAGGCGCAGTCCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476457.5
CDS CCA 90 bp AGCGTCTCCCTGGGAACCTCCCACTCGTCCTCCCACCACGGCTTCTaGGGCTTCTGGGTCTGGCAGGGGCGGCTCAACCGTGTGCACAGC +
Preference number: 5 (lower is better)
Translates to: SVSLGTSHSSSHHGF*GFWVWQGRLNRVHS
Trigger: GCTGTGCACACGGTTGAGCCGCCCCTGCCAGACCCAGAAGCCCCAGAAGCCGTGGTGGGAGGACGAGTGGGAGGTTCCCAGGGAGACGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000469765.5
ENST00000469956.1
ENST00000619559.4
CDS TCA 90 bp GGACCGACAGTGAAAACGATCCCGCGGTGCTCTCGCTCTCCCGGATaGGGAAGGAGCCGTGAGTGTTCCCGGGCGCCAGGAGCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: GPTVKTIPRCSRSPG*GRSRECSRAPGAAA
Trigger: AGCGGCAGCTCCTGGCGCCCGGGAACACTCACGGCTCCTTCCTCATCCGGGAGAGCGAGAGCACCGCGGGATCGTTTTCACTGTCGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373557.6
ENST00000373564.7
ENST00000469765.5
ENST00000495610.6
ENST00000619559.4
CDS TCA 90 bp CTGCGCCACGGAGGTGGGTCAGTGTGGCTCGCTCAGCCGTCGACCTaGGACCCTCCCTCAAAGACCCCTCCACCCCTTAAGCCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: LRHGGGSVWLAQPST*DPPSKTPPPLKPAS
Trigger: GGAGGCTGGCTTAAGGGGTGGAGGGGTCTTTGAGGGAGGGTCTCAGGTCGACGGCTGAGCGAGCCACACTGACCCACCTCCGTGGCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476457.5
CDS CCA 90 bp GGTCGCGGAGATCGCCGCTCCCTCACGGACTCCGCCAGAGCAAGGTaGAGAGGGACTCACTGCTCCAGGATGCGGAGCTGTTCCCCCTTC +
Preference number: 5 (lower is better)
Translates to: GRGDRRSLTDSARAR*RGTHCSRMRSCSPF
Trigger: GAAGGGGGAACAGCTCCGCATCCTGGAGCAGTGAGTCCCTCTCCACCTTGCTCTGGCGGAGTCCGTGAGGGAGCGGCGATCTCCGCGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355928.7
ENST00000476457.5
CDS GCA 90 bp AAGCCAACAGCCAGGGATCCGCAGGCCTTGTCTTTCAGGCCCTGCTaGCTGGGGTCACCTTGCAGTGGGGAAGCCGGCGGATTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: KPTARDPQALSFRPC*LGSPCSGEAGGLEP
Trigger: AGGCTCCAATCCGCCGGCTTCCCCACTGCAAGGTGACCCCAGGCAGCAGGGCCTGAAAGACAAGGCCTGCGGATCCCTGGCTGTTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355928.7
ENST00000373564.7
ENST00000461712.6
ENST00000477031.6
ENST00000482949.5
CDS CCA 90 bp CAACAGCCAGGGATCCGCAGGCCTTGTCTTTCAGGCCCTGCTGCCTaGGGTCACCTTGCAGTGGGGAAGCCGGCGGATTGGAGCCTTCGT +
Preference number: 5 (lower is better)
Translates to: QQPGIRRPCLSGPAA*GHLAVGKPADWSLR
Trigger: ACGAAGGCTCCAATCCGCCGGCTTCCCCACTGCAAGGTGACCCCAGGCAGCAGGGCCTGAAAGACAAGGCCTGCGGATCCCTGGCTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355928.7
ENST00000373564.7
ENST00000461712.6
ENST00000477031.6
ENST00000482949.5
CDS GCA 90 bp CGCTCCCTCACGGACTCCGCCAGAGCAAGGTGGAGAGGGACTCACTaGTCCAGGATGCGGAGCTGTTCCCCCTTCTCAAAGCCCAGATCT +
Preference number: 5 (lower is better)
Translates to: RSLTDSARARWRGTH*SRMRSCSPFSKPRS
Trigger: AGATCTGGGCTTTGAGAAGGGGGAACAGCTCCGCATCCTGGAGCAGTGAGTCCCTCTCCACCTTGCTCTGGCGGAGTCCGTGAGGGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355928.7
ENST00000476457.5
CDS CCA 90 bp TTGCAGTGGGGAAGCCGGCGGATTGGAGCCTTCGTAGGTAACCAGTaGGTCCCGCACCTCAGAGCCATTTCGGATGAGCAGCGTGCCCTT +
Preference number: 5 (lower is better)
Translates to: LQWGSRRIGAFVGNQ*VPHLRAISDEQRAL
Trigger: AAGGGCACGCTGCTCATCCGAAATGGCTCTGAGGTGCGGGACCCACTGGTTACCTACGAAGGCTCCAATCCGCCGGCTTCCCCACTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000355928.7
ENST00000373557.6
ENST00000373562.7
ENST00000373564.7
ENST00000461712.6
ENST00000469765.5
ENST00000476457.5
ENST00000477031.6
ENST00000482949.5
ENST00000495610.6
ENST00000619559.4
CDS-3UTR CAA 90 bp GAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCCTGCCTGGGGTCACCTaGCAGTGGGGAAGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: ERKVGGQKLLSIPGFSPLLPGVT*QWGSRR
Trigger: CCGCCGGCTTCCCCACTGCAAGGTGACCCCAGGCAG...GAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373564.7
CDS GCA 90 bp CACACACATCGATGTTTTCCATCCAGTCATCTTCCGGGTGTGAGCTaGAGCCACAGCCCATGGTCCCTGAGGGAATGGAAGAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: HTHRCFPSSHLPGVS*SHSPWSLREWKRGL
Trigger: CAGCCCCCTCTTCCATTCCCTCAGGGACCATGGGCTGTGGCTGCAGCTCACACCCGGAAGATGACTGGATGGAAAACATCGATGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373557.6
ENST00000373562.7
ENST00000477031.6
CDS-3UTR CAA 90 bp TATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACGATAACCAGGTTGTCTaGCAGTGGGGAAGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: YGTRTPSPQVRLERKGENDNQVV*QWGSRR
Trigger: CCGCCGGCTTCCCCACTGCAAGACAACCTGGTTATC...GTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CAA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCTGCCGCTCCGCGTCCTaGCGGCTCAGGTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPCRSAS*RLRFLK
Trigger: CTTCAAGAACCTGAGCCGCAAGGACGCGGAGCGGCA...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp TCAATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGACATGCCTTCTGCAATTaGGGCTGCCATGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: SIPGFSPLSVVSGNGRARHAFCN*GCHVQE
Trigger: CTCCTGGACATGGCAGCCCAAATTGCAGAAGGCATG...TCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCTGGCCCTTCACTTAATGGGAAACTaGGCCCCCTCCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: RPGTKEEHTEVLDKVLALHLMGN*APSLAV
Trigger: CACAGCCAGGGAGGGGGCCAAGTTTCCCATTAAGTG...AAGGGCCAGGACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp GACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATGGGCAGAAGCAAGAGTaGCTGGCCCAAGTTGCCCCA +
Preference number: 5 (lower is better)
Translates to: DMCRVHATTGHVYRHKVHGQKQE*LAQVAP
Trigger: TGGGGCAACTTGGGCCAGCAACTCTTGCTTCTGCCC...ATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333070.4
CDS-3UTR CAA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTATGAGCAGCGTGCCCTaGCCATCCAGTGGGACTATG +
Preference number: 5 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPMSSVP*PSSGTM
Trigger: CATAGTCCCACTGGATGGCAAGGGCACGCTGCTCAT...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCTGGCCCTTAGAGCGATAACCAGGTaGTCTTGCAGTGGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: RPGTKEEHTEVLDKVLALRAITR*SCSGEA
Trigger: GGCTTCCCCACTGCAAGACAACCTGGTTATCGCTCT...AAGGGCCAGGACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CAA 90 bp GACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATTTGCGGCTCAGGTTCTaGAAGAACCAGGGTTCGGGC +
Preference number: 5 (lower is better)
Translates to: DMCRVHATTGHVYRHKVHLRLRF*KNQGSG
Trigger: GCCCGAACCCTGGTTCTTCAAGAACCTGAGCCGCAA...ATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTTTGCGGCTCAGGTTCTaGAAGAACCAGGGTTCGGGC +
Preference number: 5 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPLRLRF*KNQGSG
Trigger: GCCCGAACCCTGGTTCTTCAAGAACCTGAGCCGCAA...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp GAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCTTGCGGCTCAGGTTCTaGAAGAACCAGGGTTCGGGC +
Preference number: 5 (lower is better)
Translates to: ERKVGGQKLLSIPGFSPLLRLRF*KNQGSG
Trigger: GCCCGAACCCTGGTTCTTCAAGAACCTGAGCCGCAA...GAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATTGCCGCTCCGCGTCCTaGCGGCTCAGGTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHCRSAS*RLRFLK
Trigger: CTTCAAGAACCTGAGCCGCAAGGACGCGGAGCGGCA...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAAACATGCCTTCTGCAATTaGGGCTGCCATGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: NPRLLPSLCGLRKWESQKHAFCN*GCHVQE
Trigger: CTCCTGGACATGGCAGCCCAAATTGCAGAAGGCATG...TTTCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATAGCTCCTCTGGACAGTaGTCAGGGCGCACCATGCGG +
Preference number: 5 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHSSSGQ*SGRTMR
Trigger: CCGCATGGTGCGCCCTGACAACTGTCCAGAGGAGCT...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp GACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTAGCTCCTCTGGACAGTaGTCAGGGCGCACCATGCGG +
Preference number: 5 (lower is better)
Translates to: DTCTDTRCICVTCGWDSCSSSGQ*SGRTMR
Trigger: CCGCATGGTGCGCCCTGACAACTGTCCAGAGGAGCT...ACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCTGGCCCTTGCACAGCCTCATGAGTaGGTACAGCTCCTCTGGACA +
Preference number: 5 (lower is better)
Translates to: RPGTKEEHTEVLDKVLALAQPHE*VQLLWT
Trigger: TGTCCAGAGGAGCTGTACCAACTCATGAGGCTGTGC...AAGGGCCAGGACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCATGAGCAGCGTGCCCTaGCCATCCAGTGGGACTATG +
Preference number: 5 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPMSSVP*PSSGTM
Trigger: CATAGTCCCACTGGATGGCAAGGGCACGCTGCTCAT...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCAGATAACCAGGTTGTCTaGCAGTGGGGAAGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: RCICVTCGWDSCAESICADNQVV*QWGSRR
Trigger: CCGCCGGCTTCCCCACTGCAAGACAACCTGGTTATC...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CAA 90 bp CGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGTTGCGGCTCAGGTTCTaGAAGAACCAGGGTTCGGGC +
Preference number: 5 (lower is better)
Translates to: RVQTQGAYVSHVGGIHVQLRLRF*KNQGSG
Trigger: GCCCGAACCCTGGTTCTTCAAGAACCTGAGCCGCAA...CTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp ACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTTGCCGCTCCGCGTCCTaGCGGCTCAGGTTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: TRCICVTCGWDSCAESICCRSAS*RLRFLK
Trigger: CTTCAAGAACCTGAGCCGCAAGGACGCGGAGCGGCA...ACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp GAGGAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCATGCCTTCTGCAATTaGGGCTGCCATGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: EERKVGGQKLLSIPGFSPHAFCN*GCHVQE
Trigger: CTCCTGGACATGGCAGCCCAAATTGCAGAAGGCATG...AGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp TATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACCCAAAGTCTGCAATCTaGCAGCTCAGGGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: YGTRTPSPQVRLERKGENPKSAI*QLRVSD
Trigger: GTCTGACACCCTGAGCTGCAAGATTGCAGACTTTGG...GTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp ACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTAGCTCCTCTGGACAGTaGTCAGGGCGCACCATGCGG +
Preference number: 5 (lower is better)
Translates to: TRCICVTCGWDSCAESICSSSGQ*SGRTMR
Trigger: CCGCATGGTGCGCCCTGACAACTGTCCAGAGGAGCT...ACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp GAAAGAAAAGTAGGTGGGCAGAAGCTTCTGTCAATCCCAGGCTTCTCCCCTCTCGCACAGCCTCATGAGTaGGTACAGCTCCTCTGGACA +
Preference number: 5 (lower is better)
Translates to: ERKVGGQKLLSIPGFSPLAQPHE*VQLLWT
Trigger: TGTCCAGAGGAGCTGTACCAACTCATGAGGCTGTGC...GAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCACCTACTTTTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGATGAGCAGCGTGCCCTaGCCATCCAGTGGGACTATG +
Preference number: 5 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMMSSVP*PSSGTM
Trigger: CATAGTCCCACTGGATGGCAAGGGCACGCTGCTCAT...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp ATGTGTGCCAGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCTCCAGGCTGTTCGCTTaGGCCACAAAATTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: MCARPGTKEEHTEVLDKVSRLFA*ATKLKG
Trigger: CCCCTTCAATTTTGTGGCCAAAGCGAACAGCCTGGA...GACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCTGGCACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp CGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAACCAGCCGCTGGTGTaGCAGCTGCTTCATGAGGTT +
Preference number: 5 (lower is better)
Translates to: RVQTQGAYVSHVGGIHVQNQPLV*QLLHEV
Trigger: AACCTCATGAAGCAGCTGCAACACCAGCGGCTGGTT...CTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAACCAGCCGCTGGTGTaGCAGCTGCTTCATGAGGTT +
Preference number: 5 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPNQPLV*QLLHEV
Trigger: AACCTCATGAAGCAGCTGCAACACCAGCGGCTGGTT...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp TCAATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGATTGTTGATGGTCAACTaGATGCCTGAAGGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: SIPGFSPLSVVSGNGRARLLMVN*MPEGVL
Trigger: CAAGACCCCTTCAGGCATCAAGTTGACCATCAACAA...TCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCCATGCCTTCTGCAATTaGGGCTGCCATGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPHAFCN*GCHVQE
Trigger: CTCCTGGACATGGCAGCCCAAATTGCAGAAGGCATG...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp GACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATCCAAAGTCTGCAATCTaGCAGCTCAGGGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: DMCRVHATTGHVYRHKVHPKSAI*QLRVSD
Trigger: GTCTGACACCCTGAGCTGCAAGATTGCAGACTTTGG...ATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp CGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGCTGGCTGTGTACTCGTaGTCCTCAATGAGGCGTGCT +
Preference number: 5 (lower is better)
Translates to: RVQTQGAYVSHVGGIHVQLAVYS*SSMRRA
Trigger: AGCACGCCTCATTGAGGACAACGAGTACACAGCCAG...CTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp TCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGTCACATGTCACTTAATGGGAAACTaGGCCCCCTCCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: STQLQDTCTDTRCICVTCHLMGN*APSLAV
Trigger: CACAGCCAGGGAGGGGGCCAAGTTTCCCATTAAGTG...ACATGTGACACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp GTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCACTTAATGGGAAACTaGGCCCCCTCCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: VQTQGAYVSHVGGIHVQSHLMGN*APSLAV
Trigger: CACAGCCAGGGAGGGGGCCAAGTTTCCCATTAAGTG...ACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATCACTTAATGGGAAACTaGGCCCCCTCCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHHLMGN*APSLAV
Trigger: CACAGCCAGGGAGGGGGCCAAGTTTCCCATTAAGTG...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp TCAATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGACCAGAAAGGGGTACCTaGTACAGTGTCCAAGACATA +
Preference number: 5 (lower is better)
Translates to: SIPGFSPLSVVSGNGRARPERGT*YSVQDI
Trigger: TATGTCTTGGACACTGTACAAGGTACCCCTTTCTGG...TCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp TCAATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAATAAAGTCCTGGCCCTaGAGGAACTTCTGGATGATC +
Preference number: 5 (lower is better)
Translates to: SIPGFSPLSVVSGNGRARIKSWP*RNFWMI
Trigger: GATCATCCAGAAGTTCCTCAAGGGCCAGGACTTTAT...TCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATAGAGCGATAACCAGGTaGTCTTGCAGTGGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHRAITR*SCSGEA
Trigger: GGCTTCCCCACTGCAAGACAACCTGGTTATCGCTCT...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CAA 90 bp TCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGTCACATGTAGAGCGATAACCAGGTaGTCTTGCAGTGGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: STQLQDTCTDTRCICVTCRAITR*SCSGEA
Trigger: GGCTTCCCCACTGCAAGACAACCTGGTTATCGCTCT...ACATGTGACACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000619559.4
CDS-3UTR CAA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCTCCAGGCTGTTCGCTTaGGCCACAAAATTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPSRLFA*ATKLKG
Trigger: CCCCTTCAATTTTGTGGCCAAAGCGAACAGCCTGGA...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCAAACCAGCCGCTGGTGTaGCAGCTGCTTCATGAGGTT +
Preference number: 5 (lower is better)
Translates to: RCICVTCGWDSCAESICANQPLV*QLLHEV
Trigger: AACCTCATGAAGCAGCTGCAACACCAGCGGCTGGTT...TGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp TGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCAACCAGCCGCTGGTGTaGCAGCTGCTTCATGAGGTT +
Preference number: 5 (lower is better)
Translates to: CRVHMCIGHVTMAQELHLNQPLV*QLLHEV
Trigger: AACCTCATGAAGCAGCTGCAACACCAGCGGCTGGTT...GAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp TATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACTTGTTGATGGTCAACTaGATGCCTGAAGGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: YGTRTPSPQVRLERKGENLLMVN*MPEGVL
Trigger: CAAGACCCCTTCAGGCATCAAGTTGACCATCAACAA...GTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp GGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATCTGGCTGTGTACTCGTaGTCCTCAATGAGGCGTGCT +
Preference number: 5 (lower is better)
Translates to: GAYVSHVGGIHVQSPYVHLAVYS*SSMRRA
Trigger: AGCACGCCTCATTGAGGACAACGAGTACACAGCCAG...ATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp TGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCGCACAGCCTCATGAGTaGGTACAGCTCCTCTGGACA +
Preference number: 5 (lower is better)
Translates to: CRVHMCIGHVTMAQELHLAQPHE*VQLLWT
Trigger: TGTCCAGAGGAGCTGTACCAACTCATGAGGCTGTGC...GAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAAGCACAGCCTCATGAGTaGGTACAGCTCCTCTGGACA +
Preference number: 5 (lower is better)
Translates to: SPYVHRPCDYGTRTPSPQAQPHE*VQLLWT
Trigger: TGTCCAGAGGAGCTGTACCAACTCATGAGGCTGTGC...TTGGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp GGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACAGGCCCAGAAAGGGGTACCTaGTACAGTGTCCAAGACATA +
Preference number: 5 (lower is better)
Translates to: GRARKGYLVQCPRHTCTGPERGT*YSVQDI
Trigger: TATGTCTTGGACACTGTACAAGGTACCCCTTTCTGG...GCCTGTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp TCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGTCACATGTTCCAGGCTGTTCGCTTaGGCCACAAAATTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: STQLQDTCTDTRCICVTCSRLFA*ATKLKG
Trigger: CCCCTTCAATTTTGTGGCCAAAGCGAACAGCCTGGA...ACATGTGACACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp ATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATTCCAGGCTGTTCGCTTaGGCCACAAAATTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: MCHMWVGFMCRVHMCIGHSRLFA*ATKLKG
Trigger: CCCCTTCAATTTTGTGGCCAAAGCGAACAGCCTGGA...ATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp GACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATTTGTTGATGGTCAACTaGATGCCTGAAGGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: DMCRVHATTGHVYRHKVHLLMVN*MPEGVL
Trigger: CAAGACCCCTTCAGGCATCAAGTTGACCATCAACAA...ATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp TATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACATGTCCAGGAGTTTGTaGATGGTCAACTTGATGCCT +
Preference number: 5 (lower is better)
Translates to: YGTRTPSPQVRLERKGENMSRSL*MVNLMP
Trigger: AGGCATCAAGTTGACCATCAACAAACTCCTGGACAT...GTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AGGCCAGGCACCAAGGAGGAGCACACAGAGGTATTAGATAAAGTCCTGGCCCTTATGTCCAGGAGTTTGTaGATGGTCAACTTGATGCCT +
Preference number: 5 (lower is better)
Translates to: RPGTKEEHTEVLDKVLALMSRSL*MVNLMP
Trigger: AGGCATCAAGTTGACCATCAACAAACTCCTGGACAT...AAGGGCCAGGACTTTATCTAATACCTCTGTGTGCTCCTCCTTGGTGCCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAACCAAAGTCTGCAATCTaGCAGCTCAGGGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: SPYVHRPCDYGTRTPSPQPKSAI*QLRVSD
Trigger: GTCTGACACCCTGAGCTGCAAGATTGCAGACTTTGG...TTGGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGCCAAAGTCTGCAATCTaGCAGCTCAGGGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMPKSAI*QLRVSD
Trigger: GTCTGACACCCTGAGCTGCAAGATTGCAGACTTTGG...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCATAAAGTCCTGGCCCTaGAGGAACTTCTGGATGATC +
Preference number: 5 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPIKSWP*RNFWMI
Trigger: GATCATCCAGAAGTTCCTCAAGGGCCAGGACTTTAT...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGAGAGCGATAACCAGGTaGTCTGTAAAGACAAGGGGC +
Preference number: 5 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMRAITR*SVKTRG
Trigger: GCCCCTTGTCTTTACAGACAACCTGGTTATCGCTCT...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373564.7
CDS-3UTR CAA 90 bp ATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGTTGTTGATGGTCAACTaGATGCCTGAAGGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: MWVGFMCRVHMCIGHVTMLLMVN*MPEGVL
Trigger: CAAGACCCCTTCAGGCATCAAGTTGACCATCAACAA...CATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp AGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCATGTCCAGGAGTTTGTaGATGGTCAACTTGATGCCT +
Preference number: 5 (lower is better)
Translates to: RVHMCIGHVTMAQELHLPMSRSL*MVNLMP
Trigger: AGGCATCAAGTTGACCATCAACAAACTCCTGGACAT...GGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp CGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGATGTCCAGGAGTTTGTaGATGGTCAACTTGATGCCT +
Preference number: 5 (lower is better)
Translates to: RVQTQGAYVSHVGGIHVQMSRSL*MVNLMP
Trigger: AGGCATCAAGTTGACCATCAACAAACTCCTGGACAT...CTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp TCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGTCACATGTCCAGAAAGGGGTACCTaGTACAGTGTCCAAGACATA +
Preference number: 5 (lower is better)
Translates to: STQLQDTCTDTRCICVTCPERGT*YSVQDI
Trigger: TATGTCTTGGACACTGTACAAGGTACCCCTTTCTGG...ACATGTGACACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp GTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTATAAAGTCCTGGCCCTaGAGGAACTTCTGGATGATC +
Preference number: 5 (lower is better)
Translates to: VQTQGAYVSHVGGIHVQSIKSWP*RNFWMI
Trigger: GATCATCCAGAAGTTCCTCAAGGGCCAGGACTTTAT...ACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS-3UTR CAA 90 bp TGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCATAAAGTCCTGGCCCTaGAGGAACTTCTGGATGATC +
Preference number: 5 (lower is better)
Translates to: CRVHMCIGHVTMAQELHLIKSWP*RNFWMI
Trigger: GATCATCCAGAAGTTCCTCAAGGGCCAGGACTTTAT...GAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373564.7
ENST00000619559.4
CDS GCA 72 bp CGGCCACCCCGAGCTGGTCAAGGGCCGCAGGAGGGCTaGGGGTCGCGGAGATCGCCGCTCCCTCACGGACTC +
Preference number: 6 (lower is better)
Translates to: RPPRAGQGPQEG*GSRRSPLPHGL
Trigger: GAGTCCGTGAGGGAGCGGCGATCTCCGCGACCCGCAGCCCTCCTGCGGCCCTTGACCAGCTCGGGGTGGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355928.7
ENST00000476457.5
CDS CCA 72 bp CGCCTTCCACCACTCGCCGCTCCTGCGCCACGGAGGTaGGTCAGTGTGGCTCGCTCAGCCGTCGACCTGAGA +
Preference number: 6 (lower is better)
Translates to: RLPPLAAPAPRR*VSVARSAVDLR
Trigger: TCTCAGGTCGACGGCTGAGCGAGCCACACTGACCCACCTCCGTGGCGCAGGAGCGGCGAGTGGTGGAAGGCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476457.5
CDS GCA 72 bp GCCAGGGATCCGCAGGCCTTGTCTTTCAGGCCCTGCTaGCTGGGGTCACCTTGCAGTGGGGAAGCCGGCGGA +
Preference number: 6 (lower is better)
Translates to: ARDPQALSFRPC*LGSPCSGEAGG
Trigger: TCCGCCGGCTTCCCCACTGCAAGGTGACCCCAGGCAGCAGGGCCTGAAAGACAAGGCCTGCGGATCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355928.7
ENST00000373564.7
ENST00000461712.6
ENST00000477031.6
ENST00000482949.5
CDS CCA 72 bp CCTGCCCAGCCCGGGAGCCCTCTGGCCCCATTCACATaGTCCTCCTGGCCTAACCTGGCTGCCTGGACAGTC +
Preference number: 6 (lower is better)
Translates to: PAQPGSPLAPFT*SSWPNLAAWTV
Trigger: GACTGTCCAGGCAGCCAGGTTAGGCCAGGAGGACCATGTGAATGGGGCCAGAGGGCTCCCGGGCTGGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336890.10
ENST00000355928.7
ENST00000373564.7
ENST00000476457.5
ENST00000482949.5
ENST00000495610.6
CDS CCA 72 bp CTGGGAACCTCCCACTCGTCCTCCCACCACGGCTTCTaGGGCTTCTGGGTCTGGCAGGGGCGGCTCAACCGT +
Preference number: 6 (lower is better)
Translates to: LGTSHSSSHHGF*GFWVWQGRLNR
Trigger: ACGGTTGAGCCGCCCCTGCCAGACCCAGAAGCCCCAGAAGCCGTGGTGGGAGGACGAGTGGGAGGTTCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000469765.5
ENST00000469956.1
ENST00000619559.4
CDS CAA 72 bp GTGTTCCCGGGCGCCAGGAGCTGCCGCTCCGCGTCCTaGCGGCTCAGGTTCTTGAAGAACCAGGGTTCGGGC +
Preference number: 6 (lower is better)
Translates to: VFPGARSCRSAS*RLRFLKNQGSG
Trigger: GCCCGAACCCTGGTTCTTCAAGAACCTGAGCCGCAAGGACGCGGAGCGGCAGCTCCTGGCGCCCGGGAACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373557.6
ENST00000373564.7
ENST00000469765.5
ENST00000495610.6
ENST00000619559.4
CDS CCA 72 bp GGGATCCGCAGGCCTTGTCTTTCAGGCCCTGCTGCCTaGGGTCACCTTGCAGTGGGGAAGCCGGCGGATTGG +
Preference number: 6 (lower is better)
Translates to: GIRRPCLSGPAA*GHLAVGKPADW
Trigger: CCAATCCGCCGGCTTCCCCACTGCAAGGTGACCCCAGGCAGCAGGGCCTGAAAGACAAGGCCTGCGGATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355928.7
ENST00000373564.7
ENST00000461712.6
ENST00000477031.6
ENST00000482949.5
CDS CAA 90 bp GCCAGCCTCCCCCAACCCTGGCTCAGCAATACTGAGCCTCGAATTTaGTCCCAAGGGCGGCCACCCCGAGCTGGTCAAGGGCCGCAGGAG +
Preference number: 6 (lower is better)
Translates to: ASLPQPWLSNTEPRI*SQGRPPRAGQGPQE
Trigger: CTCCTGCGGCCCTTGACCAGCTCGGGGTGGCCGCCCTTGGGACAAAATTCGAGGCTCAGTATTGCTGAGCCAGGGTTGGGGGAGGCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355928.7
ENST00000476457.5
CDS TCA 72 bp GTGAAAACGATCCCGCGGTGCTCTCGCTCTCCCGGATaGGGAAGGAGCCGTGAGTGTTCCCGGGCGCCAGGA +
Preference number: 6 (lower is better)
Translates to: VKTIPRCSRSPG*GRSRECSRAPG
Trigger: TCCTGGCGCCCGGGAACACTCACGGCTCCTTCCTCATCCGGGAGAGCGAGAGCACCGCGGGATCGTTTTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373557.6
ENST00000373564.7
ENST00000469765.5
ENST00000495610.6
ENST00000619559.4
CDS CAA 72 bp AGGAGCTGCCGCTCCGCGTCCTTGCGGCTCAGGTTCTaGAAGAACCAGGGTTCGGGCTCCAGGCTGTTCGCT +
Preference number: 6 (lower is better)
Translates to: RSCRSASLRLRF*KNQGSGSRLFA
Trigger: AGCGAACAGCCTGGAGCCCGAACCCTGGTTCTTCAAGAACCTGAGCCGCAAGGACGCGGAGCGGCAGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373557.6
ENST00000373564.7
ENST00000469765.5
ENST00000482949.5
ENST00000495610.6
ENST00000619559.4
CDS GCA 72 bp CGATGTTTTCCATCCAGTCATCTTCCGGGTGTGAGCTaGAGCCACAGCCCATGGTCCCTGCCCAGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: RCFPSSHLPGVS*SHSPWSLPSPG
Trigger: TCCCGGGCTGGGCAGGGACCATGGGCTGTGGCTGCAGCTCACACCCGGAAGATGACTGGATGGAAAACATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000336890.10
ENST00000355928.7
ENST00000373564.7
ENST00000469765.5
ENST00000476457.5
ENST00000482949.5
ENST00000495610.6
CDS GCA 72 bp GGGGCTTCTGGGTCTGGCAGGGGCGGCTCAACCGTGTaGACAGCCCATCTGAAGCATTGGTGTAATGGCGGA +
Preference number: 6 (lower is better)
Translates to: GASGSGRGGSTV*TAHLKHWCNGG
Trigger: TCCGCCATTACACCAATGCTTCAGATGGGCTGTGCACACGGTTGAGCCGCCCCTGCCAGACCCAGAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373557.6
ENST00000469765.5
ENST00000469956.1
ENST00000619559.4
CDS CCA 72 bp AGTCATCTTCCGGGTGTGAGCTGCAGCCACAGCCCATaGTCCCTGAGGGAATGGAAGAGGGGGCTGAAGGGG +
Preference number: 6 (lower is better)
Translates to: SHLPGVSCSHSP*SLREWKRGLKG
Trigger: CCCCTTCAGCCCCCTCTTCCATTCCCTCAGGGACCATGGGCTGTGGCTGCAGCTCACACCCGGAAGATGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373557.6
ENST00000477031.6
CDS CAA 72 bp CCCCAACCCTGGCTCAGCAATACTGAGCCTCGAATTTaGTCCCAAGGGCGGCCACCCCGAGCTGGTCAAGGG +
Preference number: 6 (lower is better)
Translates to: PQPWLSNTEPRI*SQGRPPRAGQG
Trigger: CCCTTGACCAGCTCGGGGTGGCCGCCCTTGGGACAAAATTCGAGGCTCAGTATTGCTGAGCCAGGGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355928.7
ENST00000476457.5
CDS GCA 72 bp ACGGACTCCGCCAGAGCAAGGTGGAGAGGGACTCACTaGTCCAGGATGCGGAGCTGTTCCCCCTTCTCAAAG +
Preference number: 6 (lower is better)
Translates to: TDSARARWRGTH*SRMRSCSPFSK
Trigger: CTTTGAGAAGGGGGAACAGCTCCGCATCCTGGAGCAGTGAGTCCCTCTCCACCTTGCTCTGGCGGAGTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355928.7
ENST00000476457.5
CDS CCA 72 bp GGAAGCCGGCGGATTGGAGCCTTCGTAGGTAACCAGTaGGTCCCGCACCTCAGAGCCATTTCGGATGAGCAG +
Preference number: 6 (lower is better)
Translates to: GSRRIGAFVGNQ*VPHLRAISDEQ
Trigger: CTGCTCATCCGAAATGGCTCTGAGGTGCGGGACCCACTGGTTACCTACGAAGGCTCCAATCCGCCGGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000355928.7
ENST00000373557.6
ENST00000373562.7
ENST00000373564.7
ENST00000461712.6
ENST00000469765.5
ENST00000476457.5
ENST00000477031.6
ENST00000482949.5
ENST00000495610.6
ENST00000619559.4
CDS CCA 72 bp GTCTGTAAAGACAAGGGGCATCAGGGAGAACCGAGCTaGGATCGGCAGGAAGCCTGGAGTTACAGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: VCKDKGHQGEPS*DRQEAWSYRVG
Trigger: CCCCACCCTGTAACTCCAGGCTTCCTGCCGATCCCAGCTCGGTTCTCCCTGATGCCCCTTGTCTTTACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355928.7
ENST00000373564.7
ENST00000461712.6
ENST00000477031.6
ENST00000482949.5
CDS CCA 72 bp AGTCATCTTCCGGGTGTGAGCTGCAGCCACAGCCCATaGTCCCTGAGGGAATGGAAGAGGGGGCTGAGATTG +
Preference number: 6 (lower is better)
Translates to: SHLPGVSCSHSP*SLREWKRGLRL
Trigger: CAATCTCAGCCCCCTCTTCCATTCCCTCAGGGACCATGGGCTGTGGCTGCAGCTCACACCCGGAAGATGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373562.7
CDS CAA 90 bp CTCAGGTTCTTGAAGAACCAGGGTTCGGGCTCCAGGCTGTTCGCTTaGGCCACAAAATTGAAGGGGATGAAGCCTTCCTGGCCCGTGGTC +
Preference number: 6 (lower is better)
Translates to: LRFLKNQGSGSRLFA*ATKLKGMKPSWPVV
Trigger: GACCACGGGCCAGGAAGGCTTCATCCCCTTCAATTTTGTGGCCAAAGCGAACAGCCTGGAGCCCGAACCCTGGTTCTTCAAGAACCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000373557.6
ENST00000373562.7
ENST00000373564.7
ENST00000469765.5
ENST00000482949.5
ENST00000495610.6
ENST00000619559.4
CDS GCA 72 bp CGATGTTTTCCATCCAGTCATCTTCCGGGTGTGAGCTaGAGCCACAGCCCATGGTCCCTGAGGGAATGGAAG +
Preference number: 6 (lower is better)
Translates to: RCFPSSHLPGVS*SHSPWSLREWK
Trigger: CTTCCATTCCCTCAGGGACCATGGGCTGTGGCTGCAGCTCACACCCGGAAGATGACTGGATGGAAAACATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373557.6
ENST00000373562.7
ENST00000477031.6
CDS CCA 72 bp GCTTTGGGCCAGAAGAAAAGGTGTATTTCCACCCTCTaGCAGGGACAGCAGGGAGAGCAGTATCCCCTGGTA +
Preference number: 6 (lower is better)
Translates to: ALGQKKRCISTL*QGQQGEQYPLV
Trigger: TACCAGGGGATACTGCTCTCCCTGCTGTCCCTGCCAGAGGGTGGAAATACACCTTTTCTTCTGGCCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469956.1
CDS TCA 72 bp TCTGCAATCTGCAGGCCAAACACAGATCAGCGGTCCTaGGCCAGATGTCTTCACGTCACTGGTCTGTTCCCT +
Preference number: 6 (lower is better)
Translates to: SAICRPNTDQRS*ARCLHVTGLFP
Trigger: AGGGAACAGACCAGTGACGTGAAGACATCTGGCTCAGGACCGCTGATCTGTGTTTGGCCTGCAGATTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469765.5
CDS CCA 72 bp GCCATTTCGGATGAGCAGCGTGCCCTTGCCATCCAGTaGGACTATGGGATAATGGCAGTTCTCACACACATC +
Preference number: 6 (lower is better)
Translates to: AISDEQRALAIQ*DYGIMAVLTHI
Trigger: GATGTGTGTGAGAACTGCCATTATCCCATAGTCCCACTGGATGGCAAGGGCACGCTGCTCATCCGAAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000333070.4
ENST00000336890.10
ENST00000355928.7
ENST00000373557.6
ENST00000373562.7
ENST00000373564.7
ENST00000461712.6
ENST00000469765.5
ENST00000476457.5
ENST00000477031.6
ENST00000482949.5
ENST00000495610.6
ENST00000619559.4
CDS CCA 72 bp GCAGGAAAGCTCAAGAAACCCTCCTTGCTTGAGCTTTaGGCCAGAAGAAAAGGTGTATTTCCACCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: AGKLKKPSLLEL*ARRKGVFPPSG
Trigger: GCCAGAGGGTGGAAATACACCTTTTCTTCTGGCCCAAAGCTCAAGCAAGGAGGGTTTCTTGAGCTTTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469956.1
CDS TCA 72 bp CCTTGCCCTGGAAAGTTCCAAAAGTACCTGAGATTGTaGGATCCTGGGATCCCCATTCACCAGCCACAGAAA +
Preference number: 6 (lower is better)
Translates to: PCPGKFQKYLRL*DPGIPIHQPQK
Trigger: TTTCTGTGGCTGGTGAATGGGGATCCCAGGATCTCACAATCTCAGGTACTTTTGGAACTTTCCAGGGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373557.6
ENST00000477031.6
CDS CAA 90 bp ATGTCCAGGAGTTTGTTGATGGTCAACTTGATGCCTGAAGGGGTCTaGAGAAAATCCACTAGACTCCCATTCTCCATGTATTCAGTGATG +
Preference number: 6 (lower is better)
Translates to: MSRSLLMVNLMPEGV*RKSTRLPFSMYSVM
Trigger: CATCACTGAATACATGGAGAATGGGAGTCTAGTGGATTTTCTCAAGACCCCTTCAGGCATCAAGTTGACCATCAACAAACTCCTGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336890.10
ENST00000373564.7
ENST00000469765.5
ENST00000495610.6
ENST00000619559.4