Pregenerated sensors for LCE3E (Homo sapiens)
Ensembl gene IDs: ENSG00000185966Ensembl transcript IDs: ENST00000368789.2
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS-3UTR TCA 90 bp | GGGTATATGGGAAGGCATGCGTCAGATGGGGCTGTTCTTGGCCTCTTGGGATTCCATCTTGGCAGGAGTTaGGATGTCCAGGTGCAGAGA | + |
Preference number: 4 (lower is better) Translates to: GYMGRHASDGAVLGLLGFHLGRS*DVQVQR Trigger: TCTCTGCACCTGGACATCTCAACTCCTGCCAAGATG...GAATCCCAAGAGGCCAAGAACAGCCCCATCTGACGCATGCCTTCCCATATACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368789.2 |
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CDS-3UTR CCA 90 bp | AAGAGGGTATATGGGAAGGCATGCGTCAGATGGGGCTGTTCTTGGCCTCTTGGGAAGGCATGCGTCAGATaGGGCTGTTCTTGGCCTCTT | + |
Preference number: 4 (lower is better) Translates to: KRVYGKACVRWGCSWPLGKACVR*GCSWPL Trigger: AAGAGGCCAAGAACAGCCCCATCTGACGCATGCCTT...CCCAAGAGGCCAAGAACAGCCCCATCTGACGCATGCCTTCCCATATACCCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368789.2 |
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CDS-3UTR GCA 90 bp | GGGTATATGGGAAGGCATGCGTCAGATGGGGCTGTTCTTGGCCTCTTGGGATTCGTATATGGGAAGGCATaGGTCAGATGGGGCTGTTCT | + |
Preference number: 4 (lower is better) Translates to: GYMGRHASDGAVLGLLGFVYGKA*VRWGCS Trigger: AGAACAGCCCCATCTGACGCATGCCTTCCCATATAC...GAATCCCAAGAGGCCAAGAACAGCCCCATCTGACGCATGCCTTCCCATATACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368789.2 |