Pregenerated sensors for LCE2A (Homo sapiens)
Ensembl gene IDs: ENSG00000187173Ensembl transcript IDs: ENST00000368779.2
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGCCATGACAACAGACAAAACACCTCACAAGGTGTGTCAGCCCAAGGAAAGGAGGGAGAAGCATCACTCTaGGACAGGTCCTGGTTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GHDNRQNTSQGVSAQGKEGEASL*DRSWLQ Trigger: TTGCAACCAGGACCTGTCCCAGAGTGATGCTTCTCC...CTCCTTTCCTTGGGCTGACACACCTTGTGAGGTGTTTTGTCTGTTGTCATGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCCATGACAACAGACAAAACACCTCACAAGGTGTGTCAGCCCAAGGAAAGGAGGGGACAGGTCCTGGTTaGAAGTTTCTCCATAAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: GHDNRQNTSQGVSAQGKEGTGPG*KFLHKG Trigger: ACCCTTATGGAGAAACTTGCAACCAGGACCTGTCCC...CTCCTTTCCTTGGGCTGACACACCTTGTGAGGTGTTTTGTCTGTTGTCATGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| 3UTR CAA 90 bp | TATGAGGTAAAGTGGGAAGGTAAGATCAGGATCCAGGATGGGCTCTaGGGCCATGACAACAGACAAAACACCTCACAAGGTGTGTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: YEVKWEGKIRIQDGL*GHDNRQNTSQGVSA Trigger: GGCTGACACACCTTGTGAGGTGTTTTGTCTGTTGTCATGGCCCAAGAGCCCATCCTGGATCCTGATCTTACCTTCCCACTTTACCTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGACAACAGACAAAACACCTCACAAGGTGTGTCAGCCCAAGGAAAGGAGAAAATTTCTCCATAAGGGTTaGTCTGTGATGTTCGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: MTTDKTPHKVCQPKERRKFLHKG*SVMFEV Trigger: GACCTCGAACATCACAGAGCAACCCTTATGGAGAAA...TTTTCTCCTTTCCTTGGGCTGACACACCTTGTGAGGTGTTTTGTCTGTTGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR TCA 90 bp | AGCATCACTCTGGGACAGGTCCTGGTTGCAAGTTTCTCCATAAGGGTTGCTCTGCATGGGGCTGGGCACTaGGGTCGGCACTTTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SITLGQVLVASFSIRVALHGAGH*GRHFGG Trigger: TCCTCCAAAGTGCCGACCTCAGTGCCCAGCCCCATG...CAGAGCAACCCTTATGGAGAAACTTGCAACCAGGACCTGTCCCAGAGTGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR CCA 90 bp | AGCATCACTCTGGGACAGGTCCTGGTTGCAAGTTTCTCCATAAGGGTTGCTCTGCTGAGGTCGGCACTTTaGAGGACACTTGGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SITLGQVLVASFSIRVALLRSAL*RTLGWA Trigger: TGCCCACCCAAGTGTCCTCCAAAGTGCCGACCTCAG...CAGAGCAACCCTTATGGAGAAACTTGCAACCAGGACCTGTCCCAGAGTGATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCCATGACAACAGACAAAACACCTCACAAGGTGTGTCAGCCCAAGGAAAGGTGGGCTCTTGGGCCATaGCAACAGACAAAACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: WAMTTDKTPHKVCQPKERWALGP*QQTKHL Trigger: GAGGTGTTTTGTCTGTTGTCATGGCCCAAGAGCCCA...CCTTTCCTTGGGCTGACACACCTTGTGAGGTGTTTTGTCTGTTGTCATGGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR CCA 90 bp | GATGGGCTCTTGGGCCATGACAACAGACAAAACACCTCACAAGGTGTGTCAGCCCGACTTTTTCAACCCTaGTCACACACAGGAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DGLLGHDNRQNTSQGVSARLFQP*SHTGAQ Trigger: CTGTGCTCCTGTGTGTGACCAGGGTTGAAAAAGTCG...GGCTGACACACCTTGTGAGGTGTTTTGTCTGTTGTCATGGCCCAAGAGCCCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGTCCTGGTTGCAAGTTTCTCCATAAGGGTTGCTCTGTGATGTTCGAGGTCGTGATGTTCGAGGTCTaGTCAGCAGCAGTCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGPGCKFLHKGCSVMFEVVMFEV*SAAVPR Trigger: TCTGGGGACTGCTGCTGACCAGACCTCGAACATCAC...GACCTCGAACATCACAGAGCAACCCTTATGGAGAAACTTGCAACCAGGACCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAGCATCACTCTGGGACAGGTCCTGGTTGCAAGTTTCTCCATAAGGGTTGCGGCAGGACATCTCAGTaGGACTTTTTCAACCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EKHHSGTGPGCKFLHKGCGRTSQ*DFFNPG Trigger: ACCAGGGTTGAAAAAGTCGCACTGAGATGTCCTGCC...GCAACCCTTATGGAGAAACTTGCAACCAGGACCTGTCCCAGAGTGATGCTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCCATGACAACAGACAAAACACCTCACAAGGTGTGTCAGCCCAAGGAAAGGGGGACAGGTCCTGGTTaGAAGTTTCTCCATAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WAMTTDKTPHKVCQPKERGTGPG*KFLHKG Trigger: ACCCTTATGGAGAAACTTGCAACCAGGACCTGTCCC...CCTTTCCTTGGGCTGACACACCTTGTGAGGTGTTTTGTCTGTTGTCATGGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCATCACTCTGGGACAGGTCCTGGTTGCAAGTTTCTCCATAAGGGTTGCTGGAGAAGCATCACTCTaGGACAGGTCCTGGTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RSITLGQVLVASFSIRVAGEASL*DRSWLQ Trigger: TTGCAACCAGGACCTGTCCCAGAGTGATGCTTCTCC...AGCAACCCTTATGGAGAAACTTGCAACCAGGACCTGTCCCAGAGTGATGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR GCA 90 bp | GGCCATGACAACAGACAAAACACCTCACAAGGTGTGTCAGCCCAAGGAAAGGAGTTTCTCCATAAGGGTTaGTCTGTGATGTTCGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GHDNRQNTSQGVSAQGKEFLHKG*SVMFEV Trigger: GACCTCGAACATCACAGAGCAACCCTTATGGAGAAA...CTCCTTTCCTTGGGCTGACACACCTTGTGAGGTGTTTTGTCTGTTGTCATGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR TCA 90 bp | ATGACAACAGACAAAACACCTCACAAGGTGTGTCAGCCCAAGGAAAGGAGAAAAATAAGGGTTGCTCTGTaGTGTTCGAGGTCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MTTDKTPHKVCQPKERRKIRVAL*CSRSGQ Trigger: CTGACCAGACCTCGAACATCACAGAGCAACCCTTAT...TTTTCTCCTTTCCTTGGGCTGACACACCTTGTGAGGTGTTTTGTCTGTTGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR CCA 90 bp | ATGACAACAGACAAAACACCTCACAAGGTGTGTCAGCCCAAGGAAAGGAGAAAATCCAGGATGGGCTCTTaGGCCATGACAACAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: MTTDKTPHKVCQPKERRKSRMGS*AMTTDK Trigger: TTTGTCTGTTGTCATGGCCCAAGAGCCCATCCTGGA...TTTTCTCCTTTCCTTGGGCTGACACACCTTGTGAGGTGTTTTGTCTGTTGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR CCA 90 bp | ATGACAACAGACAAAACACCTCACAAGGTGTGTCAGCCCAAGGAAAGGAGAAAATTGTATGAGGTAAAGTaGGAAGGTAAGATCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: MTTDKTPHKVCQPKERRKLYEVK*EGKIRI Trigger: GATCCTGATCTTACCTTCCCACTTTACCTCATACAA...TTTTCTCCTTTCCTTGGGCTGACACACCTTGTGAGGTGTTTTGTCTGTTGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS GCA 90 bp | CATCACTCTGGGACAGGTCCTGGTTGCAAGTTTCTCCATAAGGGTTaGTCTGTGATGTTCGAGGTCTGGTCAGCAGCAGTCCCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HHSGTGPGCKFLHKG*SVMFEVWSAAVPRA Trigger: AGCTCTGGGGACTGCTGCTGACCAGACCTCGAACATCACAGAGCAACCCTTATGGAGAAACTTGCAACCAGGACCTGTCCCAGAGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR CAA 90 bp | GATGGGCTCTTGGGCCATGACAACAGACAAAACACCTCACAAGGTGTGTCAGCCATCCAGGATGGGCTCTaGGGCCATGACAACAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: DGLLGHDNRQNTSQGVSAIQDGL*GHDNRQ Trigger: TTGTCTGTTGTCATGGCCCAAGAGCCCATCCTGGAT...GGCTGACACACCTTGTGAGGTGTTTTGTCTGTTGTCATGGCCCAAGAGCCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS-3UTR CAA 90 bp | ATGACAACAGACAAAACACCTCACAAGGTGTGTCAGCCCAAGGAAAGGAGAAAAGGCAAAAGAGCTTTATaGTTGTATGAGGTAAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MTTDKTPHKVCQPKERRKGKRAL*LYEVKW Trigger: CCACTTTACCTCATACAACAATAAAGCTCTTTTGCC...TTTTCTCCTTTCCTTGGGCTGACACACCTTGTGAGGTGTTTTGTCTGTTGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS TCA 72 bp | GTCCTGGTTGCAAGTTTCTCCATAAGGGTTGCTCTGTaGTGTTCGAGGTCTGGTCAGCAGCAGTCCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLVASFSIRVAL*CSRSGQQQSPE Trigger: CTCTGGGGACTGCTGCTGACCAGACCTCGAACATCACAGAGCAACCCTTATGGAGAAACTTGCAACCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||
| CDS GCA 72 bp | GGGACAGGTCCTGGTTGCAAGTTTCTCCATAAGGGTTaGTCTGTGATGTTCGAGGTCTGGTCAGCAGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GTGPGCKFLHKG*SVMFEVWSAAV Trigger: GACTGCTGCTGACCAGACCTCGAACATCACAGAGCAACCCTTATGGAGAAACTTGCAACCAGGACCTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368779.2 |
||