RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LANCL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000132434

Ensembl transcript IDs: ENST00000254770.3, ENST00000452107.6, ENST00000466041.1, ENST00000476479.1, ENST00000486376.1

Found 349 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCAGACACCTGGCTGCACCCGCTGCCTCCTCGTCTGAGAGGGGCTaGCCTGGAGAGCACCGTGCTGGCTGTGTTGCCTACTGGCTTCCC +
Preference number: 1 (lower is better)
Translates to: CRHLAAPAASSSERG*PGEHRAGCVAYWLP
Trigger: GGGAAGCCAGTAGGCAACACAGCCAGCACGGTGCTCTCCAGGGCAGCCCCTCTCAGACGAGGAGGCAGCGGGTGCAGCCAGGTGTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 90 bp CACCTGGGGAGACACCCGCATCCTAGGCCACCTTTGTGGCTGCTCTaGAGACACCTGGCTGCACCCGCTGCCTCCTCGTCTGAGAGGGGC +
Preference number: 1 (lower is better)
Translates to: HLGRHPHPRPPLWLL*RHLAAPAASSSERG
Trigger: GCCCCTCTCAGACGAGGAGGCAGCGGGTGCAGCCAGGTGTCTGCAGAGCAGCCACAAAGGTGGCCTAGGATGCGGGTGTCTCCCCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 90 bp GGGAAGCGTTCAGCTGTGCACTCCCAAACCACCCCAGCACGCCCCTaGAGAACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTC +
Preference number: 1 (lower is better)
Translates to: GKRSAVHSQTTPARP*RTAGPVRPWSGRSL
Trigger: GAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGGGTGGTTTGGGAGTGCACAGCTGAACGCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 90 bp GGACTCACCTGGGGAGACACCCGCATCCTAGGCCACCTTTGTGGCTaGTCTGCAGACACCTGGCTGCACCCGCTGCCTCCTCGTCTGAGA +
Preference number: 1 (lower is better)
Translates to: GLTWGDTRILGHLCG*SADTWLHPLPPRLR
Trigger: TCTCAGACGAGGAGGCAGCGGGTGCAGCCAGGTGTCTGCAGAGCAGCCACAAAGGTGGCCTAGGATGCGGGTGTCTCCCCAGGTGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 90 bp GGATGGACTCACCTGGGGAGACACCCGCATCCTAGGCCACCTTTGTaGCTGCTCTGCAGACACCTGGCTGCACCCGCTGCCTCCTCGTCT +
Preference number: 1 (lower is better)
Translates to: GWTHLGRHPHPRPPL*LLCRHLAAPAASSS
Trigger: AGACGAGGAGGCAGCGGGTGCAGCCAGGTGTCTGCAGAGCAGCCACAAAGGTGGCCTAGGATGCGGGTGTCTCCCCAGGTGAGTCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 90 bp TACCCTCAGCTCATTGACGACAGCATCCTGCCTGCAGGTGTGGGCTaGTGGACTGCCTGCAAAGCCCATCAACAGGCCCTGGAGGCCAGG +
Preference number: 1 (lower is better)
Translates to: YPQLIDDSILPAGVG*WTACKAHQQALEAR
Trigger: CCTGGCCTCCAGGGCCTGTTGATGGGCTTTGCAGGCAGTCCAGCAGCCCACACCTGCAGGCAGGATGCTGTCGTCAATGAGCTGAGGGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 90 bp AGCTGTGCACTCCCAAACCACCCCAGCACGCCCCTGCAGAACTGCTaGTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTG +
Preference number: 1 (lower is better)
Translates to: SCALPNHPSTPLQNC*SCPSLEWSLPHSHL
Trigger: CAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGGGTGGTTTGGGAGTGCACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 90 bp GAGAGGGGCTGCCCTGGAGAGCACCGTGCTGGCTGTGTTGCCTACTaGCTTCCCTTGAGAAATGGGGAGGCAGGACCTCTACTGAGTGCT +
Preference number: 1 (lower is better)
Translates to: ERGCPGEHRAGCVAY*LPLRNGEAGPLLSA
Trigger: AGCACTCAGTAGAGGTCCTGCCTCCCCATTTCTCAAGGGAAGCCAGTAGGCAACACAGCCAGCACGGTGCTCTCCAGGGCAGCCCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 90 bp CCCAGCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTTGGAGTaGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACAGAAAAGGCT +
Preference number: 1 (lower is better)
Translates to: PSTPLQNCWSCPSLE*SLPHSHLEGATEKA
Trigger: AGCCTTTTCTGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 90 bp ACCACCCCAGCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTTaGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACAGAAA +
Preference number: 1 (lower is better)
Translates to: TTPARPCRTAGPVRP*SGRSLILIWKVPQK
Trigger: TTTCTGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR TCA 90 bp CTCCCCAACAAAGCTCCAGCTGCCCTGGACTCTACACAAAGCACCTaGAGCCTCTGCTGGGAATGGGGCCCTGACAGAGCTGCAATGCAC +
Preference number: 1 (lower is better)
Translates to: LPNKAPAALDSTQST*SLCWEWGPDRAAMH
Trigger: GTGCATTGCAGCTCTGTCAGGGCCCCATTCCCAGCAGAGGCTTCAGGTGCTTTGTGTAGAGTCCAGGGCAGCTGGAGCTTTGTTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 90 bp CTCCCTTTGGGTCCAGAAGTCTCCCCAACAAAGCTCCAGCTGCCCTaGACTCTACACAAAGCACCTGAAGCCTCTGCTGGGAATGGGGCC +
Preference number: 1 (lower is better)
Translates to: LPLGPEVSPTKLQLP*TLHKAPEASAGNGA
Trigger: GGCCCCATTCCCAGCAGAGGCTTCAGGTGCTTTGTGTAGAGTCCAGGGCAGCTGGAGCTTTGTTGGGGAGACTTCTGGACCCAAAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 90 bp CCAGCCATGCCATGGGCTGCTCCAACGTACTGCTTCCGGTGCCACTaGTACAACAGCGGGCAGCGCTCCGTTTTTCTTTCTTCCCTTGAC +
Preference number: 1 (lower is better)
Translates to: PAMPWAAPTYCFRCH*YNSGQRSVFLSSLD
Trigger: GTCAAGGGAAGAAAGAAAAACGGAGCGCTGCCCGCTGTTGTACCAGTGGCACCGGAAGCAGTACGTTGGAGCAGCCCATGGCATGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR GCA 90 bp GTCTTCAGCAAAGCAGCTACCCTCAGCTCATTGACGACAGCATCCTaGCTGCAGGTGTGGGCTGCTGGACTGCCTGCAAAGCCCATCAAC +
Preference number: 1 (lower is better)
Translates to: VFSKAATLSSLTTAS*LQVWAAGLPAKPIN
Trigger: GTTGATGGGCTTTGCAGGCAGTCCAGCAGCCCACACCTGCAGGCAGGATGCTGTCGTCAATGAGCTGAGGGTAGCTGCTTTGCTGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 90 bp CTGCCTACAGTGTGGCCATCAAAGGCTTCTTGGGAAAGCTCCCTTTaGGTCCAGAAGTCTCCCCAACAAAGCTCCAGCTGCCCTGGACTC +
Preference number: 1 (lower is better)
Translates to: LPTVWPSKASWESSL*VQKSPQQSSSCPGL
Trigger: GAGTCCAGGGCAGCTGGAGCTTTGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGCCACACTGTAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 90 bp GAAAGCTCCCTTTGGGTCCAGAAGTCTCCCCAACAAAGCTCCAGCTaGCCTGGACTCTACACAAAGCACCTGAAGCCTCTGCTGGGAATG +
Preference number: 1 (lower is better)
Translates to: ESSLWVQKSPQQSSS*PGLYTKHLKPLLGM
Trigger: CATTCCCAGCAGAGGCTTCAGGTGCTTTGTGTAGAGTCCAGGGCAGCTGGAGCTTTGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR TCA 90 bp ACTCTGCAAACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGTaGGACGGTAAAGGGACAGGAAGGAATAGCCGTTGCCAGCAGTCC +
Preference number: 1 (lower is better)
Translates to: TLQTCKLGRGTSYPA*DGKGTGRNSRCQQS
Trigger: GGACTGCTGGCAACGGCTATTCCTTCCTGTCCCTTTACCGTCTCACGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGTTTGCAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR CCA 90 bp AGAGCACCGTGCTGGCTGTGTTGCCTACTGGCTTCCCTTGAGAAATaGGGAGGCAGGACCTCTACTGAGTGCTGTGATGTGTTATGTTTT +
Preference number: 1 (lower is better)
Translates to: RAPCWLCCLLASLEK*GGRTSTECCDVLCF
Trigger: AAAACATAACACATCACAGCACTCAGTAGAGGTCCTGCCTCCCCATTTCTCAAGGGAAGCCAGTAGGCAACACAGCCAGCACGGTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR TCA 90 bp AAGGGTGTCTGCAGCAAACAGACTCTCCAGGCATCGTTTAGAAGCTaGATGTCACACATTTCGGGTGCCAGCCCCACACATAACCACACA +
Preference number: 1 (lower is better)
Translates to: KGVCSKQTLQASFRS*MSHISGASPTHNHT
Trigger: TGTGTGGTTATGTGTGGGGCTGGCACCCGAAATGTGTGACATTCAGCTTCTAAACGATGCCTGGAGAGTCTGTTTGCTGCAGACACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR TCA 90 bp TTTTTACGTAATCCAGGGATCGGAGCAGGTAGGTTTGGTCACATGTaGCCCGGTACAACTGCAGGTACAAAAGGGCTATGCCTGTCCAGC +
Preference number: 1 (lower is better)
Translates to: FLRNPGIGAGRFGHM*PGTTAGTKGLCLSS
Trigger: GCTGGACAGGCATAGCCCTTTTGTACCTGCAGTTGTACCGGGTCACATGTGACCAAACCTACCTGCTCCGATCCCTGGATTACGTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR CCA 90 bp AGAAAGACTAATAGTGTTTTTCAAACGTGTGTGGATGGACTCACCTaGGGAGACACCCGCATCCTAGGCCACCTTTGTGGCTGCTCTGCA +
Preference number: 1 (lower is better)
Translates to: RKTNSVFQTCVDGLT*GDTRILGHLCGCSA
Trigger: TGCAGAGCAGCCACAAAGGTGGCCTAGGATGCGGGTGTCTCCCCAGGTGAGTCCATCCACACACGTTTGAAAAACACTATTAGTCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR TCA 90 bp GGGGAGGATGGGAACAATGTTATTTGGATGAGATTGGACATCGTGTaGGGTCTTCAGCAAAGCAGCTACCCTCAGCTCATTGACGACAGC +
Preference number: 1 (lower is better)
Translates to: GEDGNNVIWMRLDIV*GLQQSSYPQLIDDS
Trigger: GCTGTCGTCAATGAGCTGAGGGTAGCTGCTTTGCTGAAGACCTCACACGATGTCCAATCTCATCCAAATAACATTGTTCCCATCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 90 bp ACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTaGTGCCTACAGTGTGGCCATCAAAGGCTTCTTGGGAAAGCTCCC +
Preference number: 1 (lower is better)
Translates to: TYTWVNVLELPVLSH*CLQCGHQRLLGKAP
Trigger: GGGAGCTTTCCCAAGAAGCCTTTGATGGCCACACTGTAGGCAGCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR TCA 90 bp CTTTTAATCCCTCTTCGAAGAGTCAAGTTCAAATGCTGGAAACCGTaGTGTCTCTGGTCCCAGGACATCAGAGAGAAAGTGAATAGCGCC +
Preference number: 1 (lower is better)
Translates to: LLIPLRRVKFKCWKP*CLWSQDIREKVNSA
Trigger: GGCGCTATTCACTTTCTCTCTGATGTCCTGGGACCAGAGACATCACGGTTTCCAGCATTTGAACTTGACTCTTCGAAGAGGGATTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR TCA 90 bp CCACTGGTACAACAGCGGGCAGCGCTCCGTTTTTCTTTCTTCCCTTaGCAAAGTCTTACCCGATTCAATAATAGCATTGACTACCTCTTT +
Preference number: 1 (lower is better)
Translates to: PLVQQRAALRFSFFP*QSLTRFNNSIDYLF
Trigger: AAAGAGGTAGTCAATGCTATTATTGAATCGGGTAAGACTTTGTCAAGGGAAGAAAGAAAAACGGAGCGCTGCCCGCTGTTGTACCAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR GCA 90 bp GCAGAGCAGTCATGGGGATCAGCTGTCTTCAGCCCTTCTTCCATTTaGTGCAGAAGATCTTTAATTTTGGTCTGGATCCGTCTTATGAAA +
Preference number: 1 (lower is better)
Translates to: AEQSWGSAVFSPSSI*CRRSLILVWIRLMK
Trigger: TTTCATAAGACGGATCCAGACCAAAATTAAAGATCTTCTGCAGCAAATGGAAGAAGGGCTGAAGACAGCTGATCCCCATGACTGCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR GCA 90 bp GAGCAGTCATGGGGATCAGCTGTCTTCAGCCCTTCTTCCATTTGCTaGAGAAGATCTTTAATTTTGGTCTGGATCCGTCTTATGAAATTA +
Preference number: 1 (lower is better)
Translates to: EQSWGSAVFSPSSIC*RRSLILVWIRLMKL
Trigger: TAATTTCATAAGACGGATCCAGACCAAAATTAAAGATCTTCTGCAGCAAATGGAAGAAGGGCTGAAGACAGCTGATCCCCATGACTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR GCA 90 bp ACTTTATACATTTTATACAGAAAAGTGGACACTGCCATACATTCATaGATGGTCAGCTCTGAGCCCTCAGGAATAGAAGGGCCTTCCATT +
Preference number: 1 (lower is better)
Translates to: TLYILYRKVDTAIHS*MVSSEPSGIEGPSI
Trigger: AATGGAAGGCCCTTCTATTCCTGAGGGCTCAGAGCTGACCATGCATGAATGTATGGCAGTGTCCACTTTTCTGTATAAAATGTATAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CAA 90 bp AACCACCCCAGCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTaGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACAGAA +
Preference number: 2 (lower is better)
Translates to: NHPSTPLQNCWSCPS*EWSLPHSHLEGATE
Trigger: TTCTGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGGGTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR CCA 90 bp CCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTTGCCTGGAGGGACCGAGCTGCCCCTGCAGAACTGCTaGTCCTGTCCGTCCTTGGAG +
Preference number: 2 (lower is better)
Translates to: PLSCEVSPVSPLPGGTELPLQNC*SCPSLE
Trigger: CTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGG...CAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR CCA 90 bp CCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTTGCCTGGAGGGACCGAGCTGAGCCTCTGCTGGGAATaGGGCCCTGACAGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: PLSCEVSPVSPLPGGTELSLCWE*GPDRAA
Trigger: TGCAGCTCTGTCAGGGCCCCATTCCCAGCAGAGGCT...CAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CAA 90 bp TGCCCTGGAGAGCACCGTGCTGGCTGTGTTGCCTACTGGCTTCCCTaGAGAAATGGGGAGGCAGGACCTCTACTGAGTGCTGTGATGTGT +
Preference number: 2 (lower is better)
Translates to: CPGEHRAGCVAYWLP*RNGEAGPLLSAVMC
Trigger: ACACATCACAGCACTCAGTAGAGGTCCTGCCTCCCCATTTCTCAAGGGAAGCCAGTAGGCAACACAGCCAGCACGGTGCTCTCCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR TCA 90 bp TGCGGCACCCGTGTGCTCCGTAATCTAGACACCACTCTGCAAACTTGCAAGCTCCCCCACAGAGGAAGGTaGCCCTGCGGCCATTCAGAT +
Preference number: 2 (lower is better)
Translates to: CGTRVLRNLDTTLQTCKLPHRGR*PCGHSD
Trigger: ATCTGAATGGCCGCAGGGTCACCTTCCTCTGTGGGG...GAGCTTGCAAGTTTGCAGAGTGGTGTCTAGATTACGGAGCACACGGGTGCCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR CAA 90 bp GCTGCCTACAGTGTGGCCATCAAAGGCTTCTTGGGAAAGCTCCCTTaGGGTCCAGAAGTCTCCCCAACAAAGCTCCAGCTGCCCTGGACT +
Preference number: 2 (lower is better)
Translates to: AAYSVAIKGFLGKLP*GPEVSPTKLQLPWT
Trigger: AGTCCAGGGCAGCTGGAGCTTTGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGCCACACTGTAGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR GCA 90 bp GTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACGCCTGTGACGGTGTCTaGTTCTCTTTCAGGATTCCC +
Preference number: 2 (lower is better)
Translates to: VLSVLGVVAPSFSSGRCHACDGV*FSFRIP
Trigger: GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGC...GTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR GCA 90 bp AGACATGAGGCAGGGGTTAATGCAGAACCACGGAACAGCACCTCTGATGACATCACCCCAGCACGCCCCTaGAGAACTGCTGGTCCTGTC +
Preference number: 2 (lower is better)
Translates to: RHEAGVNAEPRNSTSDDITPARP*RTAGPV
Trigger: GACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGGGT...GATGTCATCAGAGGTGCTGTTCCGTGGTTCTGCATTAACCCCTGCCTCATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR TCA 90 bp CCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACAGAAAAGAACCAGAGGGGCCTGTaGCGGTGTCTGCTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: PSLEWSLPHSHLEGATEKNQRGL*RCLLLF
Trigger: AAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTT...CTTTTCTGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR TCA 90 bp GGCTGTGTTGCCTACTGGCTTCCCTTGAGAAATGGGGAGGCAGGACCTCTACTGATGCATGGTCAGCTCTaGGCCCTCAGGAATAGAAGG +
Preference number: 2 (lower is better)
Translates to: GCVAYWLPLRNGEAGPLLMHGQL*ALRNRR
Trigger: CCTTCTATTCCTGAGGGCTCAGAGCTGACCATGCAT...CAGTAGAGGTCCTGCCTCCCCATTTCTCAAGGGAAGCCAGTAGGCAACACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR GCA 90 bp CCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTTGCCTGGAGGGACCGAGCTGCCAGTGCTTAGTCACTaGTGCCTACAGTGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: PLSCEVSPVSPLPGGTELPVLSH*CLQCGH
Trigger: ATGGCCACACTGTAGGCAGCAGTGACTAAGCACTGG...CAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR GCA 90 bp CCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTTGCCTGGAGGGACCGAGCTGAGGAGCAAGGGTGTCTaGAGCAAACAGACTCTCCAG +
Preference number: 2 (lower is better)
Translates to: PLSCEVSPVSPLPGGTELRSKGV*SKQTLQ
Trigger: CTGGAGAGTCTGTTTGCTGCAGACACCCTTGCTCCT...CAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR GCA 90 bp CACTCCATGGCCTCTTTCAAGTACTTCTCCTCCTTAAAGACCTTGTACGCCTGCGCGCCGTGGCACCAGTaGACCAGCCGGTCTGTTTCA +
Preference number: 2 (lower is better)
Translates to: HSMASFKYFSSLKTLYACAPWHQ*TSRSVS
Trigger: TGAAACAGACCGGCTGGTGCACTGGTGCCACGGCGC...GCAGGCGTACAAGGTCTTTAAGGAGGAGAAGTACTTGAAAGAGGCCATGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR CCA 90 bp AGACATGAGGCAGGGGTTAATGCAGAACCACGGAACAGCACCTCTGATGACATCTGTGGACACTGGGGCTaGGAAATGCTCAGGCCTCCC +
Preference number: 2 (lower is better)
Translates to: RHEAGVNAEPRNSTSDDICGHWG*EMLRPP
Trigger: GGGAGGCCTGAGCATTTCCCAGCCCCAGTGTCCACA...GATGTCATCAGAGGTGCTGTTCCGTGGTTCTGCATTAACCCCTGCCTCATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR GCA 90 bp CCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTTGCCTGGAGGGACCGAGCTGCAACAAAGCTCCAGCTaGCCTGGACTCTACACAAAG +
Preference number: 2 (lower is better)
Translates to: PLSCEVSPVSPLPGGTELQQSSS*PGLYTK
Trigger: CTTTGTGTAGAGTCCAGGGCAGCTGGAGCTTTGTTG...CAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR GCA 90 bp CATGGGCTGCTCCAACGTACTGCTTCCGGTGCCACTGGTACAACAGCGGGCAGCACCGATCTCTGGAGCTaGAAAAGTTTTGTGACACAT +
Preference number: 2 (lower is better)
Translates to: HGLLQRTASGATGTTAGSTDLWS*KSFVTH
Trigger: ATGTGTCACAAAACTTTTGCAGCTCCAGAGATCGGT...GCTGCCCGCTGTTGTACCAGTGGCACCGGAAGCAGTACGTTGGAGCAGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp CCACTCTGCAAACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGTGAGACGGCTGCTCCAACGTACTaGTTCCGGTGCCACTGGTAC +
Preference number: 2 (lower is better)
Translates to: PLCKLASSVEVLLILRETAAPTY*FRCHWY
Trigger: GTACCAGTGGCACCGGAAGCAGTACGTTGGAGCAGC...CGTCTCACGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGTTTGCAGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR CCA 90 bp AGACATGAGGCAGGGGTTAATGCAGAACCACGGAACAGCACCTCTGATGACATCCCTAGGCCACCTTTGTaGCTGCTCTGCAGACACCTG +
Preference number: 2 (lower is better)
Translates to: RHEAGVNAEPRNSTSDDIPRPPL*LLCRHL
Trigger: CAGGTGTCTGCAGAGCAGCCACAAAGGTGGCCTAGG...GATGTCATCAGAGGTGCTGTTCCGTGGTTCTGCATTAACCCCTGCCTCATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CAA 90 bp AGGCCTCCCCCTGCAGACAAGGACTGGGCTGTTAAGAGAGGCCTCTaGTCTTTCATGACACAAGCCTTAGCTCACAAGACGAGAAGTACC +
Preference number: 2 (lower is better)
Translates to: RPPPADKDWAVKRGL*SFMTQALAHKTRST
Trigger: GGTACTTCTCGTCTTGTGAGCTAAGGCTTGTGTCATGAAAGACAAGAGGCCTCTCTTAACAGCCCAGTCCTTGTCTGCAGGGGGAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR GCA 90 bp GACTGGGCTGTTAAGAGAGGCCTCTTGTCTTTCATGACACAAGCCTTAGCTCACGGAAGCGTTCAGCTGTaGACTCCCAAACCACCCCAG +
Preference number: 2 (lower is better)
Translates to: DWAVKRGLLSFMTQALAHGSVQL*TPKPPQ
Trigger: CTGGGGTGGTTTGGGAGTGCACAGCTGAACGCTTCC...GTGAGCTAAGGCTTGTGTCATGAAAGACAAGAGGCCTCTCTTAACAGCCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR GCA 90 bp ACACCACTCTGCAAACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGTGAGACGTACTGCTTCCGGTaGCACTGGTACAACAGCGGG +
Preference number: 2 (lower is better)
Translates to: TPLCKLASSVEVLLILRETYCFR*HWYNSG
Trigger: CCCGCTGTTGTACCAGTGGCACCGGAAGCAGTACGT...CTCACGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGTTTGCAGAGTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp ACACCACTCTGCAAACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGTGAGAGCCATGCCATGGGCTaGTCCAACGTACTGCTTCCG +
Preference number: 2 (lower is better)
Translates to: TPLCKLASSVEVLLILRESHAMG*SNVLLP
Trigger: CGGAAGCAGTACGTTGGAGCAGCCCATGGCATGGCT...CTCACGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGTTTGCAGAGTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp CTTCAAAGAGCGAATAGGGTCTGTCAGGAATGCGGCACCCGTGTGCTCCGTAATGGAAGGAATAGCCGTTaGCAGCAGTCCCATGGCATA +
Preference number: 2 (lower is better)
Translates to: LQRANRVCQECGTRVLRNGRNSR*QQSHGI
Trigger: TATGCCATGGGACTGCTGGCAACGGCTATTCCTTCC...ATTACGGAGCACACGGGTGCCGCATTCCTGACAGACCCTATTCGCTCTTTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR CCA 90 bp ATATCCCGTAGCCCTTCCGCAGCAAACCTCGCTGCCAAATCACATCGCTACACTCTCACACACGGTGCCTaGACCTATCTCTGTGTTCAG +
Preference number: 2 (lower is better)
Translates to: ISRSPSAANLAAKSHRYTLTHGA*TYLCVQ
Trigger: CTGAACACAGAGATAGGTCCAGGCACCGTGTGTGAG...AGTGTAGCGATGTGATTTGGCAGCGAGGTTTGCTGCGGAAGGGCTACGGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR TCA 90 bp TTAATAGCTGACTCACACACGGTGCCTGGACCTATCTCTGTGTTCAGGTACAGTAACCAGAGGGGCCTGTaGCGGTGTCTGCTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: LIADSHTVPGPISVFRYSNQRGL*RCLLLF
Trigger: AAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTT...ACTGTACCTGAACACAGAGATAGGTCCAGGCACCGTGTGTGAGTCAGCTATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR TCA 90 bp CCACTCTGCAAACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGTGAGACGCTCATCAGGAAGGTCTaGTTCTTGGCAGACAACCGA +
Preference number: 2 (lower is better)
Translates to: PLCKLASSVEVLLILRETLIRKV*FLADNR
Trigger: TCGGTTGTCTGCCAAGAATCAGACCTTCCTGATGAG...CGTCTCACGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGTTTGCAGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp AGACATGAGGCAGGGGTTAATGCAGAACCACGGAACAGCACCTCTGATGACATCACTGCCATACATTCATaGATGGTCAGCTCTGAGCCC +
Preference number: 2 (lower is better)
Translates to: RHEAGVNAEPRNSTSDDITAIHS*MVSSEP
Trigger: GGGCTCAGAGCTGACCATGCATGAATGTATGGCAGT...GATGTCATCAGAGGTGCTGTTCCGTGGTTCTGCATTAACCCCTGCCTCATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR GCA 90 bp ACACCACTCTGCAAACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGTGAGCGCAGCAAACCTCGCTaGCAAATCACATCGCTACAC +
Preference number: 2 (lower is better)
Translates to: TPLCKLASSVEVLLILRERSKPR*QITSLH
Trigger: GTGTAGCGATGTGATTTGGCAGCGAGGTTTGCTGCG...CTCACGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGTTTGCAGAGTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR CCA 90 bp CCAGCCATGCCATGGGCTGCTCCAACGTACTGCTTCCGGTGCCACTGGTACAACATTAGCAATGCTTTCTaGATTTGCCATTCCCTATTG +
Preference number: 2 (lower is better)
Translates to: PAMPWAAPTYCFRCHWYNISNAF*ICHSLL
Trigger: CAATAGGGAATGGCAAATCCAGAAAGCATTGCTAAT...GTTGTACCAGTGGCACCGGAAGCAGTACGTTGGAGCAGCCCATGGCATGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR CAA 90 bp ACTTCTGTCAATCCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTaGCCTGGAGGGACCGAGCTGGAATTACTGTCACATGTTACAGAC +
Preference number: 2 (lower is better)
Translates to: TSVNPLSCEVSPVSP*PGGTELELLSHVTD
Trigger: GTCTGTAACATGTGACAGTAATTCCAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGGATTGACAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CAA 90 bp CCGAAGTGTTCTTTTTACGTAATCCAGGGATCGGAGCAGGTAGGTTaGGTCACATGTGACCCGGTACAACTGCAGGTACAAAAGGGCTAT +
Preference number: 2 (lower is better)
Translates to: PKCSFYVIQGSEQVG*VTCDPVQLQVQKGY
Trigger: ATAGCCCTTTTGTACCTGCAGTTGTACCGGGTCACATGTGACCAAACCTACCTGCTCCGATCCCTGGATTACGTAAAAAGAACACTTCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR TCA 90 bp AGACATGAGGCAGGGGTTAATGCAGAACCACGGAACAGCACCTCTGATGACATCGCTGTTAGAAAATGTTaGTGGATGGCTTCGGTCACT +
Preference number: 2 (lower is better)
Translates to: RHEAGVNAEPRNSTSDDIAVRKC*WMASVT
Trigger: AGTGACCGAAGCCATCCATCAACATTTTCTAACAGC...GATGTCATCAGAGGTGCTGTTCCGTGGTTCTGCATTAACCCCTGCCTCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR TCA 90 bp ACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTGCTGCCTATCTACACAAAGCACCTaGAGCCTCTGCTGGGAATGG +
Preference number: 2 (lower is better)
Translates to: TYTWVNVLELPVLSHCCLSTQST*SLCWEW
Trigger: CCATTCCCAGCAGAGGCTTCAGGTGCTTTGTGTAGA...TAGGCAGCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR TCA 90 bp TCCCTCTTCGAAGAGTCAAGTTCAAATGCTGGAAACCGTGATGTCTCTGGTCCCGCTGCAAAAGTTTTGTaGCACATTCCTGGGACTCAC +
Preference number: 2 (lower is better)
Translates to: SLFEESSSNAGNRDVSGPAAKVL*HIPGTH
Trigger: GTGAGTCCCAGGAATGTGTCACAAAACTTTTGCAGC...GGGACCAGAGACATCACGGTTTCCAGCATTTGAACTTGACTCTTCGAAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp TTAATAGCTGACTCACACACGGTGCCTGGACCTATCTCTGTGTTCAGGTACAGTGGCATACAGATAACCTaGCCGTCCATAAAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: LIADSHTVPGPISVFRYSGIQIT*PSIKQL
Trigger: GAGCTGCTTTATGGACGGGCAGGTTATCTGTATGCC...ACTGTACCTGAACACAGAGATAGGTCCAGGCACCGTGTGTGAGTCAGCTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR CCA 90 bp CCAGCCGGTCTGTTTCATTGCTTAATGATGATGGGTAATTCCCAGATCGGAATTATTCCAGCCATGCCATaGGCTGCTCCAACGTACTGC +
Preference number: 2 (lower is better)
Translates to: PAGLFHCLMMMGNSQIGIIPAMP*AAPTYC
Trigger: GCAGTACGTTGGAGCAGCCCATGGCATGGCTGGAAT...AATTCCGATCTGGGAATTACCCATCATCATTAAGCAATGAAACAGACCGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp ATATCCCGTAGCCCTTCCGCAGCAAACCTCGCTGCCAAATCACATCGCTACACTGCCGGTCTGTTTCATTaGTTAATGATGATGGGTAAT +
Preference number: 2 (lower is better)
Translates to: ISRSPSAANLAAKSHRYTAGLFH*LMMMGN
Trigger: ATTACCCATCATCATTAAGCAATGAAACAGACCGGC...AGTGTAGCGATGTGATTTGGCAGCGAGGTTTGCTGCGGAAGGGCTACGGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR CCA 90 bp CCACTCTGCAAACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGTGAGACGGAAAATGTTGATGGATaGCTTCGGTCACTCATGCTA +
Preference number: 2 (lower is better)
Translates to: PLCKLASSVEVLLILRETENVDG*LRSLML
Trigger: TAGCATGAGTGACCGAAGCCATCCATCAACATTTTC...CGTCTCACGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGTTTGCAGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR TCA 90 bp TTAATAGCTGACTCACACACGGTGCCTGGACCTATCTCTGTGTTCAGGTACAGTGCTGTTAGAAAATGTTaGTGGATGGCTTCGGTCACT +
Preference number: 2 (lower is better)
Translates to: LIADSHTVPGPISVFRYSAVRKC*WMASVT
Trigger: AGTGACCGAAGCCATCCATCAACATTTTCTAACAGC...ACTGTACCTGAACACAGAGATAGGTCCAGGCACCGTGTGTGAGTCAGCTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR TCA 90 bp AGACATGAGGCAGGGGTTAATGCAGAACCACGGAACAGCACCTCTGATGACATCACAATGTTATTTGGATaGGATTGGACATCGTGTGAG +
Preference number: 2 (lower is better)
Translates to: RHEAGVNAEPRNSTSDDITMLFG*DWTSCE
Trigger: CTCACACGATGTCCAATCTCATCCAAATAACATTGT...GATGTCATCAGAGGTGCTGTTCCGTGGTTCTGCATTAACCCCTGCCTCATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR CCA 90 bp TTAATAGCTGACTCACACACGGTGCCTGGACCTATCTCTGTGTTCAGGTACAGTCAGACAACCGATCTCTaGAGCTGCAAAAGTTTTGTG +
Preference number: 2 (lower is better)
Translates to: LIADSHTVPGPISVFRYSQTTDL*SCKSFV
Trigger: CACAAAACTTTTGCAGCTCCAGAGATCGGTTGTCTG...ACTGTACCTGAACACAGAGATAGGTCCAGGCACCGTGTGTGAGTCAGCTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp GTTGTCTTTTTGCACCTTTTAATCCCTCTTCGAAGAGTCAAGTTCAAATGCTGGGCCTGTGACGGTGTCTaGTTCTCTTTCAGGATTCCC +
Preference number: 2 (lower is better)
Translates to: VVFLHLLIPLRRVKFKCWACDGV*FSFRIP
Trigger: GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGC...CCAGCATTTGAACTTGACTCTTCGAAGAGGGATTAAAAGGTGCAAAAAGACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp CCAGCCGGTCTGTTTCATTGCTTAATGATGATGGGTAATTCCCAGATCGGAATTGGTACAAAAGGGCTATaGCTGTCCAGCCAGTATAAG +
Preference number: 2 (lower is better)
Translates to: PAGLFHCLMMMGNSQIGIGTKGL*LSSQYK
Trigger: CTTATACTGGCTGGACAGGCATAGCCCTTTTGTACC...AATTCCGATCTGGGAATTACCCATCATCATTAAGCAATGAAACAGACCGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR TCA 90 bp GGAGCCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTAGCTGCAATGCACTCTaGGGCTTCTTTAAAACACGA +
Preference number: 2 (lower is better)
Translates to: GACFSNIYLGKCSGTASASCNAL*GFFKTR
Trigger: TCGTGTTTTAAAGAAGCCTCAGAGTGCATTGCAGCT...AGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR TCA 90 bp TTAATAGCTGACTCACACACGGTGCCTGGACCTATCTCTGTGTTCAGGTACAGTACTCACAGTCACTTCTaGGTTTGTGATAAATCACAG +
Preference number: 2 (lower is better)
Translates to: LIADSHTVPGPISVFRYSTHSHF*VCDKSQ
Trigger: CTGTGATTTATCACAAACTCAGAAGTGACTGTGAGT...ACTGTACCTGAACACAGAGATAGGTCCAGGCACCGTGTGTGAGTCAGCTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp ACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTGCTGCCTACAGAAAAGTGGACACTaGCATACATTCATGCATGGT +
Preference number: 2 (lower is better)
Translates to: TYTWVNVLELPVLSHCCLQKSGH*HTFMHG
Trigger: ACCATGCATGAATGTATGGCAGTGTCCACTTTTCTG...TAGGCAGCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR GCA 90 bp CACTCCATGGCCTCTTTCAAGTACTTCTCCTCCTTAAAGACCTTGTACGCCTGCGCTTCTGTTACTGAATaGACCAAAAAGAGTAACTGT +
Preference number: 2 (lower is better)
Translates to: HSMASFKYFSSLKTLYACASVTE*TKKSNC
Trigger: ACAGTTACTCTTTTTGGTGCATTCAGTAACAGAAGC...GCAGGCGTACAAGGTCTTTAAGGAGGAGAAGTACTTGAAAGAGGCCATGGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp GCTGCCAAATCACATCGCTACACTCCATGGCCTCTTTCAAGTACTTCTCCTCCTAGCCCTTCTTCCATTTaGTGCAGAAGATCTTTAATT +
Preference number: 2 (lower is better)
Translates to: AAKSHRYTPWPLSSTSPPSPSSI*CRRSLI
Trigger: AATTAAAGATCTTCTGCAGCAAATGGAAGAAGGGCT...AGGAGGAGAAGTACTTGAAAGAGGCCATGGAGTGTAGCGATGTGATTTGGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp GTTGTCTTTTTGCACCTTTTAATCCCTCTTCGAAGAGTCAAGTTCAAATGCTGGGTGACCCGGTACAACTaGAGGTACAAAAGGGCTATG +
Preference number: 2 (lower is better)
Translates to: VVFLHLLIPLRRVKFKCWVTRYN*RYKRAM
Trigger: CATAGCCCTTTTGTACCTGCAGTTGTACCGGGTCAC...CCAGCATTTGAACTTGACTCTTCGAAGAGGGATTAAAAGGTGCAAAAAGACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp GTCTTTTTGCACCTTTTAATCCCTCTTCGAAGAGTCAAGTTCAAATGCTGGAAACTGACTCACACACGGTaGCTGGACCTATCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: VFLHLLIPLRRVKFKCWKLTHTR*LDLSLC
Trigger: ACACAGAGATAGGTCCAGGCACCGTGTGTGAGTCAG...TTTCCAGCATTTGAACTTGACTCTTCGAAGAGGGATTAAAAGGTGCAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR CCA 90 bp CCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCCATACATTCATGCATaGTCAGCTCTGAGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: PVLVTYTWVNVLELPVLSPYIHA*SALSPQ
Trigger: CTGAGGGCTCAGAGCTGACCATGCATGAATGTATGG...ACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR CCA 90 bp AGACATGAGGCAGGGGTTAATGCAGAACCACGGAACAGCACCTCTGATGACATCCCTCATTTGTCAATATaGAAGAAACCCCACTTTATA +
Preference number: 2 (lower is better)
Translates to: RHEAGVNAEPRNSTSDDIPHLSI*KKPHFI
Trigger: TATAAAGTGGGGTTTCTTCCATATTGACAAATGAGG...GATGTCATCAGAGGTGCTGTTCCGTGGTTCTGCATTAACCCCTGCCTCATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR GCA 90 bp CTCTGGAGCTGCAAAAGTTTTGTGACACATTCCTGGGACTCACAGTCACTTCTGAATGCTTTCTGGATTTaGCATTCCCTATTGTTTTGG +
Preference number: 2 (lower is better)
Translates to: LWSCKSFVTHSWDSQSLLNAFWI*HSLLFW
Trigger: CCAAAACAATAGGGAATGGCAAATCCAGAAAGCATT...CAGAAGTGACTGTGAGTCCCAGGAATGTGTCACAAAACTTTTGCAGCTCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp TTAATAGCTGACTCACACACGGTGCCTGGACCTATCTCTGTGTTCAGGTACAGTCCTTCTTCCATTTGCTaGAGAAGATCTTTAATTTTG +
Preference number: 2 (lower is better)
Translates to: LIADSHTVPGPISVFRYSPSSIC*RRSLIL
Trigger: CAAAATTAAAGATCTTCTGCAGCAAATGGAAGAAGG...ACTGTACCTGAACACAGAGATAGGTCCAGGCACCGTGTGTGAGTCAGCTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR GCA 90 bp ACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTGCTGCCTAAAACACCAAGAAACATaGAAACACTACAGAGAATCT +
Preference number: 2 (lower is better)
Translates to: TYTWVNVLELPVLSHCCLKHQET*KHYRES
Trigger: AGATTCTCTGTAGTGTTTGCATGTTTCTTGGTGTTT...TAGGCAGCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR TCA 90 bp GTTGTCTTTTTGCACCTTTTAATCCCTCTTCGAAGAGTCAAGTTCAAATGCTGGTTTTCTTTCTTCCCTTaGCAAAGTCTTACCCGATTC +
Preference number: 2 (lower is better)
Translates to: VVFLHLLIPLRRVKFKCWFSFFP*QSLTRF
Trigger: GAATCGGGTAAGACTTTGTCAAGGGAAGAAAGAAAA...CCAGCATTTGAACTTGACTCTTCGAAGAGGGATTAAAAGGTGCAAAAAGACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR GCA 72 bp CTGGCTGCACCCGCTGCCTCCTCGTCTGAGAGGGGCTaGCCTGGAGAGCACCGTGCTGGCTGTGTTGCCTAC +
Preference number: 3 (lower is better)
Translates to: LAAPAASSSERG*PGEHRAGCVAY
Trigger: GTAGGCAACACAGCCAGCACGGTGCTCTCCAGGGCAGCCCCTCTCAGACGAGGAGGCAGCGGGTGCAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 72 bp TGGGGAGACACCCGCATCCTAGGCCACCTTTGTGGCTaGTCTGCAGACACCTGGCTGCACCCGCTGCCTCCT +
Preference number: 3 (lower is better)
Translates to: WGDTRILGHLCG*SADTWLHPLPP
Trigger: AGGAGGCAGCGGGTGCAGCCAGGTGTCTGCAGAGCAGCCACAAAGGTGGCCTAGGATGCGGGTGTCTCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 72 bp GAGGGGCTGCCCTGGAGAGCACCGTGCTGGCTGTGTTaGCTACTGGCTTCCCTTGAGAAATGGGGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: EGLPWRAPCWLC*LLASLEKWGGR
Trigger: CCTGCCTCCCCATTTCTCAAGGGAAGCCAGTAGGCAACACAGCCAGCACGGTGCTCTCCAGGGCAGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 72 bp CTCCCAAACCACCCCAGCACGCCCCTGCAGAACTGCTaGTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCAT +
Preference number: 3 (lower is better)
Translates to: LPNHPSTPLQNC*SCPSLEWSLPH
Trigger: ATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGGGTGGTTTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 72 bp ATCCTAGGCCACCTTTGTGGCTGCTCTGCAGACACCTaGCTGCACCCGCTGCCTCCTCGTCTGAGAGGGGCT +
Preference number: 3 (lower is better)
Translates to: ILGHLCGCSADT*LHPLPPRLRGA
Trigger: AGCCCCTCTCAGACGAGGAGGCAGCGGGTGCAGCCAGGTGTCTGCAGAGCAGCCACAAAGGTGGCCTAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 72 bp GCCATGCCATGGGCTGCTCCAACGTACTGCTTCCGGTaGCACTGGTACAACAGCGGGCAGCGCTCCGTTTTT +
Preference number: 3 (lower is better)
Translates to: AMPWAAPTYCFR*HWYNSGQRSVF
Trigger: AAAAACGGAGCGCTGCCCGCTGTTGTACCAGTGGCACCGGAAGCAGTACGTTGGAGCAGCCCATGGCATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR CCA 72 bp GCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTTaGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTG +
Preference number: 3 (lower is better)
Translates to: ARPCRTAGPVRP*SGRSLILIWKV
Trigger: CACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 72 bp CCCCTGCAGAACTGCTGGTCCTGTCCGTCCTTGGAGTaGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACA +
Preference number: 3 (lower is better)
Translates to: PLQNCWSCPSLE*SLPHSHLEGAT
Trigger: TGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 72 bp TGCCCTGGAGAGCACCGTGCTGGCTGTGTTGCCTACTaGCTTCCCTTGAGAAATGGGGAGGCAGGACCTCTA +
Preference number: 3 (lower is better)
Translates to: CPGEHRAGCVAY*LPLRNGEAGPL
Trigger: TAGAGGTCCTGCCTCCCCATTTCTCAAGGGAAGCCAGTAGGCAACACAGCCAGCACGGTGCTCTCCAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR CAA 90 bp GCTAGTCTAACCAGAGGGGCCTGTGACGGTGTCTGCTTCTCTTTCAGGATTCCCTGGTCCTGTCCGTCCTaGGAGTGGTCGCTCCCTCAT +
Preference number: 3 (lower is better)
Translates to: ASLTRGACDGVCFSFRIPWSCPS*EWSLPH
Trigger: ATGAGGGAGCGACCACTCCAAGGACGGACAGGACCA...GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTTAGACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR TCA 72 bp AAAGCTCCAGCTGCCCTGGACTCTACACAAAGCACCTaGAGCCTCTGCTGGGAATGGGGCCCTGACAGAGCT +
Preference number: 3 (lower is better)
Translates to: KAPAALDSTQST*SLCWEWGPDRA
Trigger: AGCTCTGTCAGGGCCCCATTCCCAGCAGAGGCTTCAGGTGCTTTGTGTAGAGTCCAGGGCAGCTGGAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR TCA 72 bp GTGAGGTCTTCAGCAAAGCAGCTACCCTCAGCTCATTaGCGACAGCATCCTGCCTGCAGGTGTGGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: VRSSAKQLPSAH*RQHPACRCGLL
Trigger: CAGCAGCCCACACCTGCAGGCAGGATGCTGTCGTCAATGAGCTGAGGGTAGCTGCTTTGCTGAAGACCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 72 bp AAAGCAGCTACCCTCAGCTCATTGACGACAGCATCCTaGCTGCAGGTGTGGGCTGCTGGACTGCCTGCAAAG +
Preference number: 3 (lower is better)
Translates to: KAATLSSLTTAS*LQVWAAGLPAK
Trigger: CTTTGCAGGCAGTCCAGCAGCCCACACCTGCAGGCAGGATGCTGTCGTCAATGAGCTGAGGGTAGCTGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 72 bp AGCATGTGGATGACCCCCGGGGCGCCGTGGCACCAGTaGACCAGCCGGTCTGTTTCATTGCTTAATGATGAT +
Preference number: 3 (lower is better)
Translates to: SMWMTPGAPWHQ*TSRSVSLLNDD
Trigger: ATCATCATTAAGCAATGAAACAGACCGGCTGGTGCACTGGTGCCACGGCGCCCCGGGGGTCATCCACATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR CCA 72 bp CCATGGGCTGCTCCAACGTACTGCTTCCGGTGCCACTaGTACAACAGCGGGCAGCGCTCCGTTTTTCTTTCT +
Preference number: 3 (lower is better)
Translates to: PWAAPTYCFRCH*YNSGQRSVFLS
Trigger: AGAAAGAAAAACGGAGCGCTGCCCGCTGTTGTACCAGTGGCACCGGAAGCAGTACGTTGGAGCAGCCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR CAA 90 bp TGCTTCCGGTGCCACTGGTACAACAGCGGGCAGCGCTCCGTTTTTCTTTCTTCCTCGGAGCAGGTAGGTTaGGTCACATGTGACCCGGTA +
Preference number: 3 (lower is better)
Translates to: CFRCHWYNSGQRSVFLSSSEQVG*VTCDPV
Trigger: TACCGGGTCACATGTGACCAAACCTACCTGCTCCGA...GGAAGAAAGAAAAACGGAGCGCTGCCCGCTGTTGTACCAGTGGCACCGGAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR GCA 72 bp CTTTGGGTCCAGAAGTCTCCCCAACAAAGCTCCAGCTaGCCTGGACTCTACACAAAGCACCTGAAGCCTCTG +
Preference number: 3 (lower is better)
Translates to: LWVQKSPQQSSS*PGLYTKHLKPL
Trigger: CAGAGGCTTCAGGTGCTTTGTGTAGAGTCCAGGGCAGCTGGAGCTTTGTTGGGGAGACTTCTGGACCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 72 bp GTGTGGCCATCAAAGGCTTCTTGGGAAAGCTCCCTTTaGGTCCAGAAGTCTCCCCAACAAAGCTCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: VWPSKASWESSL*VQKSPQQSSSC
Trigger: GCAGCTGGAGCTTTGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 72 bp CTGCCGGCTGCATTAACATATAGTAAATTCCAGCCATaGCATGGGCTGCTCCAACGTACTGCTTCCGGTGCC +
Preference number: 3 (lower is better)
Translates to: LPAALTYSKFQP*HGLLQRTASGA
Trigger: GGCACCGGAAGCAGTACGTTGGAGCAGCCCATGGCATGGCTGGAATTTACTATATGTTAATGCAGCCGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR GCA 72 bp CCATGCCTTCAAAGAGCGAATAGGGTCTGTCAGGAATaGGGCACCCGTGTGCTCCGTAATCTAGACACCACT +
Preference number: 3 (lower is better)
Translates to: PCLQRANRVCQE*GTRVLRNLDTT
Trigger: AGTGGTGTCTAGATTACGGAGCACACGGGTGCCGCATTCCTGACAGACCCTATTCGCTCTTTGAAGGCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR CAA 90 bp TGCGGCACCCGTGTGCTCCGTAATCTAGACACCACTCTGCAAACTTGCAAGCTCTTCTGTCAAGGTTTCTaGGTCCACTTTTGCTGCCGG +
Preference number: 3 (lower is better)
Translates to: CGTRVLRNLDTTLQTCKLFCQGF*VHFCCR
Trigger: CCGGCAGCAAAAGTGGACCAAGAAACCTTGACAGAA...GAGCTTGCAAGTTTGCAGAGTGGTGTCTAGATTACGGAGCACACGGGTGCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR TCA 72 bp AATCCAGGGATCGGAGCAGGTAGGTTTGGTCACATGTaGCCCGGTACAACTGCAGGTACAAAAGGGCTATGC +
Preference number: 3 (lower is better)
Translates to: NPGIGAGRFGHM*PGTTAGTKGLC
Trigger: GCATAGCCCTTTTGTACCTGCAGTTGTACCGGGTCACATGTGACCAAACCTACCTGCTCCGATCCCTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR TCA 72 bp ACCTGCCCGTCCATAAAGCAGCTCATCAGGAAGGTCTaGTTCTTGGCAGACAACCGATCTCTGGAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: TCPSIKQLIRKV*FLADNRSLELQ
Trigger: TTGCAGCTCCAGAGATCGGTTGTCTGCCAAGAATCAGACCTTCCTGATGAGCTGCTTTATGGACGGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR CCA 72 bp AATAGTGTTTTTCAAACGTGTGTGGATGGACTCACCTaGGGAGACACCCGCATCCTAGGCCACCTTTGTGGC +
Preference number: 3 (lower is better)
Translates to: NSVFQTCVDGLT*GDTRILGHLCG
Trigger: GCCACAAAGGTGGCCTAGGATGCGGGTGTCTCCCCAGGTGAGTCCATCCACACACGTTTGAAAAACACTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR TCA 72 bp TGCAGCAAACAGACTCTCCAGGCATCGTTTAGAAGCTaGATGTCACACATTTCGGGTGCCAGCCCCACACAT +
Preference number: 3 (lower is better)
Translates to: CSKQTLQASFRS*MSHISGASPTH
Trigger: ATGTGTGGGGCTGGCACCCGAAATGTGTGACATTCAGCTTCTAAACGATGCCTGGAGAGTCTGTTTGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR TCA 72 bp ACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGTaGGACGGTAAAGGGACAGGAAGGAATAGCCGTTGC +
Preference number: 3 (lower is better)
Translates to: TCKLGRGTSYPA*DGKGTGRNSRC
Trigger: GCAACGGCTATTCCTTCCTGTCCCTTTACCGTCTCACGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR GCA 72 bp TGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTaGTGCCTACAGTGTGGCCATCAAAGGCTTCTTGGG +
Preference number: 3 (lower is better)
Translates to: WVNVLELPVLSH*CLQCGHQRLLG
Trigger: CCCAAGAAGCCTTTGATGGCCACACTGTAGGCAGCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 72 bp TCCCTTGAGAAATGGGGAGGCAGGACCTCTACTGAGTaGTGTGATGTGTTATGTTTTGATGTGGTGGGTGGG +
Preference number: 3 (lower is better)
Translates to: SLEKWGGRTSTE*CDVLCFDVVGG
Trigger: CCCACCCACCACATCAAAACATAACACATCACAGCACTCAGTAGAGGTCCTGCCTCCCCATTTCTCAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR GCA 72 bp CGCCGTGGCACCAGTGCACCAGCCGGTCTGTTTCATTaGTTAATGATGATGGGTAATTCCCAGATCGGAATT +
Preference number: 3 (lower is better)
Translates to: RRGTSAPAGLFH*LMMMGNSQIGI
Trigger: AATTCCGATCTGGGAATTACCCATCATCATTAAGCAATGAAACAGACCGGCTGGTGCACTGGTGCCACGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR CAA 90 bp AACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGCAATCTGGTGGCTTTaGGTCCAAATGGGTATTTTA +
Preference number: 3 (lower is better)
Translates to: NCWSCPSLEWSLPHSHLEAIWWL*VQMGIL
Trigger: TAAAATACCCATTTGGACCAAAAGCCACCAGATTGC...TTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CCA 72 bp GTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTaGAAGGTGCCACAGAAAAGGCTGACAATGTATTAT +
Preference number: 3 (lower is better)
Translates to: VRPWSGRSLILI*KVPQKRLTMYY
Trigger: ATAATACATTGTCAGCCTTTTCTGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR CAA 90 bp GCAGGTACAAAAGGGCTATGCCTGTCCAGCCAGTATAAGCAGAGCAGTCATGGGGCAATCTGGTGGCTTTaGGTCCAAATGGGTATTTTA +
Preference number: 3 (lower is better)
Translates to: AGTKGLCLSSQYKQSSHGAIWWL*VQMGIL
Trigger: TAAAATACCCATTTGGACCAAAAGCCACCAGATTGC...CCCATGACTGCTCTGCTTATACTGGCTGGACAGGCATAGCCCTTTTGTACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR TCA 72 bp CCTCTTCGAAGAGTCAAGTTCAAATGCTGGAAACCGTaGTGTCTCTGGTCCCAGGACATCAGAGAGAAAGTG +
Preference number: 3 (lower is better)
Translates to: PLRRVKFKCWKP*CLWSQDIREKV
Trigger: CACTTTCTCTCTGATGTCCTGGGACCAGAGACATCACGGTTTCCAGCATTTGAACTTGACTCTTCGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR CCA 72 bp TCAGGAAGGTCTGATTCTTGGCAGACAACCGATCTCTaGAGCTGCAAAAGTTTTGTGACACATTCCTGGGAC +
Preference number: 3 (lower is better)
Translates to: SGRSDSWQTTDL*SCKSFVTHSWD
Trigger: GTCCCAGGAATGTGTCACAAAACTTTTGCAGCTCCAGAGATCGGTTGTCTGCCAAGAATCAGACCTTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR CAA 90 bp GCAGGTACAAAAGGGCTATGCCTGTCCAGCCAGTATAAGCAGAGCAGTCATGGGAGAAGATCTTTAATTTaGGTCTGGATCCGTCTTATG +
Preference number: 3 (lower is better)
Translates to: AGTKGLCLSSQYKQSSHGRRSLI*VWIRLM
Trigger: CATAAGACGGATCCAGACCAAAATTAAAGATCTTCT...CCCATGACTGCTCTGCTTATACTGGCTGGACAGGCATAGCCCTTTTGTACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR TCA 72 bp GGGAACAATGTTATTTGGATGAGATTGGACATCGTGTaGGGTCTTCAGCAAAGCAGCTACCCTCAGCTCATT +
Preference number: 3 (lower is better)
Translates to: GNNVIWMRLDIV*GLQQSSYPQLI
Trigger: AATGAGCTGAGGGTAGCTGCTTTGCTGAAGACCTCACACGATGTCCAATCTCATCCAAATAACATTGTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR TCA 72 bp CAACAGCGGGCAGCGCTCCGTTTTTCTTTCTTCCCTTaGCAAAGTCTTACCCGATTCAATAATAGCATTGAC +
Preference number: 3 (lower is better)
Translates to: QQRAALRFSFFP*QSLTRFNNSID
Trigger: GTCAATGCTATTATTGAATCGGGTAAGACTTTGTCAAGGGAAGAAAGAAAAACGGAGCGCTGCCCGCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR GCA 72 bp TCATGGGGATCAGCTGTCTTCAGCCCTTCTTCCATTTaGTGCAGAAGATCTTTAATTTTGGTCTGGATCCGT +
Preference number: 3 (lower is better)
Translates to: SWGSAVFSPSSI*CRRSLILVWIR
Trigger: ACGGATCCAGACCAAAATTAAAGATCTTCTGCAGCAAATGGAAGAAGGGCTGAAGACAGCTGATCCCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR CCA 72 bp CCTCTACTGAGTGCTGTGATGTGTTATGTTTTGATGTaGTGGGTGGGGAGGATGGGAACAATGTTATTTGGA +
Preference number: 3 (lower is better)
Translates to: PLLSAVMCYVLM*WVGRMGTMLFG
Trigger: TCCAAATAACATTGTTCCCATCCTCCCCACCCACCACATCAAAACATAACACATCACAGCACTCAGTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR CAA 90 bp GGAGCCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTTTCAGGATTCCCAGTaGTTTCTGTGTCAGGCACTA +
Preference number: 3 (lower is better)
Translates to: GACFSNIYLGKCSGTASAFQDSQ*FLCQAL
Trigger: TAGTGCCTGACACAGAAACAACTGGGAATCCTGAAA...AGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR CAA 90 bp CTAGACACCACTCTGCAAACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGTTTTTCTTTCTTCCCTaGACAAAGTCTTACCCGATT +
Preference number: 3 (lower is better)
Translates to: LDTTLQTCKLGRGTSYPAFFFLP*TKSYPI
Trigger: AATCGGGTAAGACTTTGTCAAGGGAAGAAAGAAAAA...CGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGTTTGCAGAGTGGTGTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR GCA 72 bp ATTTTATACAGAAAAGTGGACACTGCCATACATTCATaGATGGTCAGCTCTGAGCCCTCAGGAATAGAAGGG +
Preference number: 3 (lower is better)
Translates to: ILYRKVDTAIHS*MVSSEPSGIEG
Trigger: CCCTTCTATTCCTGAGGGCTCAGAGCTGACCATGCATGAATGTATGGCAGTGTCCACTTTTCTGTATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR CAA 90 bp GTTGTCTTTTTGCACCTTTTAATCCCTCTTCGAAGAGTCAAGTTCAAATGCTGGTTTCAGGATTCCCAGTaGTTTCTGTGTCAGGCACTA +
Preference number: 3 (lower is better)
Translates to: VVFLHLLIPLRRVKFKCWFQDSQ*FLCQAL
Trigger: TAGTGCCTGACACAGAAACAACTGGGAATCCTGAAA...CCAGCATTTGAACTTGACTCTTCGAAGAGGGATTAAAAGGTGCAAAAAGACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR-3UTR CAA 90 bp CCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACCTGTTCCCTCATTaGTCAATATGGAAGAAACCC +
Preference number: 3 (lower is better)
Translates to: PVLVTYTWVNVLELPVLSHLFPH*SIWKKP
Trigger: GGGTTTCTTCCATATTGACAAATGAGGGAACAGGTG...ACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR-3UTR CAA 90 bp CTGCAAAAGTTTTGTGACACATTCCTGGGACTCACAGTCACTTCTGAGTTTGTGCAATGCTTTCTGGATTaGCCATTCCCTATTGTTTTG +
Preference number: 3 (lower is better)
Translates to: LQKFCDTFLGLTVTSEFVQCFLD*PFPIVL
Trigger: CAAAACAATAGGGAATGGCAAATCCAGAAAGCATTG...CACAAACTCAGAAGTGACTGTGAGTCCCAGGAATGTGTCACAAAACTTTTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452107.6
3UTR GCA 72 bp CTTGTAAATGTATTTAACTTTGCTTCTGTTACTGAATaGACCAAAAAGAGTAACTGTCTGGTTCTCCATCCA +
Preference number: 3 (lower is better)
Translates to: LVNVFNFASVTE*TKKSNCLVLHP
Trigger: TGGATGGAGAACCAGACAGTTACTCTTTTTGGTGCATTCAGTAACAGAAGCAAAGTTAAATACATTTACAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR TCA 90 bp CCCAGCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCGAGGAGCGGGGCGTCTaGGCGTGCACTGCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: PSTPLQNCWSCPSLEWSLEERGV*ACTASS
Trigger: CGACGAGGCAGTGCACGCTCAGACGCCCCGCTCCTC...GAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CCCAGCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCTGCTTCCGGTGCCACTaGTACAACAGCGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: PSTPLQNCWSCPSLEWSLCFRCH*YNSGQR
Trigger: GCGCTGCCCGCTGTTGTACCAGTGGCACCGGAAGCA...GAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACCGTCTGAGCGTGCACTaGCTCGTCGCGGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VLSVLGVVAPSFSSGRCHRLSVH*LVAGCS
Trigger: CGAGCAGCCCGCGACGAGGCAGTGCACGCTCAGACG...GTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp AACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGCGAGCTCAGCCCCTaGCGCGCCGTCGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NCWSCPSLEWSLPHSHLEGELSP*RAVVSL
Trigger: CAGGCTGACGACGGCGCGCCAGGGGCTGAGCTCGCC...TTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp AACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAACGGCCGCAGAGGCGGTaGGCGCTGTGCCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: NCWSCPSLEWSLPHSHLERPQRR*ALCLCP
Trigger: AGGGCAGAGGCACAGCGCCCACCGCCTCTGCGGCCG...TTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp GGCTGTGTTGCCTACTGGCTTCCCTTGAGAAATGGGGAGGCAGGACCTCTACTGGGCCGGGCTCATCCGTaGTCGCCGGGGGACGAACAC +
Preference number: 4 (lower is better)
Translates to: GCVAYWLPLRNGEAGPLLGRAHP*SPGDEH
Trigger: GTGTTCGTCCCCCGGCGACCACGGATGAGCCCGGCC...CAGTAGAGGTCCTGCCTCCCCATTTCTCAAGGGAAGCCAGTAGGCAACACAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp CCCAGCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCAGGTTTGGTCACATGTaGCCCGGTACAACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSTPLQNCWSCPSLEWSLRFGHM*PGTTAG
Trigger: ACCTGCAGTTGTACCGGGTCACATGTGACCAAACCT...GAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp CCAGCCATGCCATGGGCTGCTCCAACGTACTGCTTCCGGTGCCACTGGTACAACCCCCACAGAGGAAGGTaGCCCTGCGGCCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: PAMPWAAPTYCFRCHWYNPHRGR*PCGHSD
Trigger: ATCTGAATGGCCGCAGGGTCACCTTCCTCTGTGGGG...GTTGTACCAGTGGCACCGGAAGCAGTACGTTGGAGCAGCCCATGGCATGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR TCA 90 bp CCCAGCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCTCTACACAAAGCACCTaGAGCCTCTGCTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: PSTPLQNCWSCPSLEWSLSTQST*SLCWEW
Trigger: CCATTCCCAGCAGAGGCTTCAGGTGCTTTGTGTAGA...GAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GGCTGTGTTGCCTACTGGCTTCCCTTGAGAAATGGGGAGGCAGGACCTCTACTGGCGCCGTCGTCAGCCTaGATTTCACCGGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GCVAYWLPLRNGEAGPLLAPSSA*ISPAPA
Trigger: AGCAGGGGCCGGTGAAATGCAGGCTGACGACGGCGC...CAGTAGAGGTCCTGCCTCCCCATTTCTCAAGGGAAGCCAGTAGGCAACACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GCTAGTCTAACCAGAGGGGCCTGTGACGGTGTCTGCTTCTCTTTCAGGATTCCCCAGCGGCTCACAGCCTaGTCGCGCCTCCTCGCACCT +
Preference number: 4 (lower is better)
Translates to: ASLTRGACDGVCFSFRIPQRLTA*SRLLAP
Trigger: AGGTGCGAGGAGGCGCGAGCAGGCTGTGAGCCGCTG...GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTTAGACTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CCCAGCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCTGTCCGTCCTTGGAGTaGTCGCTCCCTCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: PSTPLQNCWSCPSLEWSLCPSLE*SLPHSH
Trigger: ATGAGAATGAGGGAGCGACCACTCCAAGGACGGACA...GAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GCCATCAAAGGCTTCTTGGGAAAGCTCCCTTTGGGTCCAGAAGTCTCCCCAACAGTCACTCAAGGTGTGTaGGCGTCGCCGACCGGGGCG +
Preference number: 4 (lower is better)
Translates to: AIKGFLGKLPLGPEVSPTVTQGV*ASPTGA
Trigger: CGCCCCGGTCGGCGACGCGCACACACCTTGAGTGAC...TGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp AGACATGAGGCAGGGGTTAATGCAGAACCACGGAACAGCACCTCTGATGACATCTGCCTCGTCGCGGGCTaGTCGCACATCAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: RHEAGVNAEPRNSTSDDICLVAG*SHIRRP
Trigger: CGGCCGCCTGATGTGCGAGCAGCCCGCGACGAGGCA...GATGTCATCAGAGGTGCTGTTCCGTGGTTCTGCATTAACCCCTGCCTCATGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACCCTTTGTGGCTGCTCTaGAGACACCTGGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: VLSVLGVVAPSFSSGRCHPLWLL*RHLAAP
Trigger: GGGTGCAGCCAGGTGTCTGCAGAGCAGCCACAAAGG...GTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CAA 72 bp AGCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTaGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: STPLQNCWSCPS*EWSLPHSHLEG
Trigger: ACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp CCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACAGAAAAGGCTGTGGGCGCTGTGCCTCTaGCCTGTTCCTGGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: PWSGRSLILIWKVPQKRLWALCL*PVPGAF
Trigger: AAAGGCGCCAGGAACAGGGCAGAGGCACAGCGCCCA...CAGCCTTTTCTGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp CCCAGCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCGGTACAAAAGGGCTATaGCTGTCCAGCCAGTATAAG +
Preference number: 4 (lower is better)
Translates to: PSTPLQNCWSCPSLEWSLGTKGL*LSSQYK
Trigger: CTTATACTGGCTGGACAGGCATAGCCCTTTTGTACC...GAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp CCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTTGCCTGGAGGGACCGAGCTGACGCCCCTGCAGAACTaGTGGTCCTGTCCGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PLSCEVSPVSPLPGGTELTPLQN*WSCPSL
Trigger: CAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGT...CAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp GTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACTCAGCCTCTTTGACATaGTCTCGCCCATCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: VLSVLGVVAPSFSSGRCHSASLT*SRPSPP
Trigger: CGGCGGAGATGGGCGAGACCATGTCAAAGAGGCTGA...GTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp GGCTGTGTTGCCTACTGGCTTCCCTTGAGAAATGGGGAGGCAGGACCTCTACTGAGCCTCTGCTGGGAATaGGGCCCTGACAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GCVAYWLPLRNGEAGPLLSLCWE*GPDRAA
Trigger: TGCAGCTCTGTCAGGGCCCCATTCCCAGCAGAGGCT...CAGTAGAGGTCCTGCCTCCCCATTTCTCAAGGGAAGCCAGTAGGCAACACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GGCTGTGTTGCCTACTGGCTTCCCTTGAGAAATGGGGAGGCAGGACCTCTACTGAGCCATGCCATGGGCTaGTCCAACGTACTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GCVAYWLPLRNGEAGPLLSHAMG*SNVLLP
Trigger: CGGAAGCAGTACGTTGGAGCAGCCCATGGCATGGCT...CAGTAGAGGTCCTGCCTCCCCATTTCTCAAGGGAAGCCAGTAGGCAACACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp AACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGCTGCTGGACTGCCTaGAAAGCCCATCAACAGGCC +
Preference number: 4 (lower is better)
Translates to: NCWSCPSLEWSLPHSHLEGCWTA*KAHQQA
Trigger: GGCCTGTTGATGGGCTTTGCAGGCAGTCCAGCAGCC...TTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GCTAGTCTAACCAGAGGGGCCTGTGACGGTGTCTGCTTCTCTTTCAGGATTCCCGTCCCGTTTCTCCTTTaGCTGGAGGGACCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ASLTRGACDGVCFSFRIPVPFLL*LEGPSW
Trigger: CCAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGAC...GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTTAGACTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CCCAGCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCCAGACAACCGATCTCTaGAGCTGCAAAAGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: PSTPLQNCWSCPSLEWSLQTTDL*SCKSFV
Trigger: CACAAAACTTTTGCAGCTCCAGAGATCGGTTGTCTG...GAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp GCAGGTACAAAAGGGCTATGCCTGTCCAGCCAGTATAAGCAGAGCAGTCATGGGTGCTTCCGGTGCCACTaGTACAACAGCGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: AGTKGLCLSSQYKQSSHGCFRCH*YNSGQR
Trigger: GCGCTGCCCGCTGTTGTACCAGTGGCACCGGAAGCA...CCCATGACTGCTCTGCTTATACTGGCTGGACAGGCATAGCCCTTTTGTACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CCA 90 bp GGCTGTGTTGCCTACTGGCTTCCCTTGAGAAATGGGGAGGCAGGACCTCTACTGGGTCCTGTCCGTCCTTaGAGTGGTCGCTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: GCVAYWLPLRNGEAGPLLGPVRP*SGRSLI
Trigger: AATGAGGGAGCGACCACTCCAAGGACGGACAGGACC...CAGTAGAGGTCCTGCCTCCCCATTTCTCAAGGGAAGCCAGTAGGCAACACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp AACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAACGTACTGCTTCCGGTaGCACTGGTACAACAGCGGG +
Preference number: 4 (lower is better)
Translates to: NCWSCPSLEWSLPHSHLETYCFR*HWYNSG
Trigger: CCCGCTGTTGTACCAGTGGCACCGGAAGCAGTACGT...TTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GCTAGTCTAACCAGAGGGGCCTGTGACGGTGTCTGCTTCTCTTTCAGGATTCCCGCTGCTCCAACGTACTaGTTCCGGTGCCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: ASLTRGACDGVCFSFRIPAAPTY*FRCHWY
Trigger: GTACCAGTGGCACCGGAAGCAGTACGTTGGAGCAGC...GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTTAGACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254770.3
ENST00000452107.6
CDS-3UTR GCA 90 bp GCTAGTCTAACCAGAGGGGCCTGTGACGGTGTCTGCTTCTCTTTCAGGATTCCCGGAAGCGTTCAGCTGTaGACTCCCAAACCACCCCAG +
Preference number: 4 (lower is better)
Translates to: ASLTRGACDGVCFSFRIPGSVQL*TPKPPQ
Trigger: CTGGGGTGGTTTGGGAGTGCACAGCTGAACGCTTCC...GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTTAGACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACAGGAGCAAGGGTGTCTaGAGCAAACAGACTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VLSVLGVVAPSFSSGRCHRSKGV*SKQTLQ
Trigger: CTGGAGAGTCTGTTTGCTGCAGACACCCTTGCTCCT...GTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CCCAGCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCGAAAATGTTGATGGATaGCTTCGGTCACTCATGCTA +
Preference number: 4 (lower is better)
Translates to: PSTPLQNCWSCPSLEWSLENVDG*LRSLML
Trigger: TAGCATGAGTGACCGAAGCCATCCATCAACATTTTC...GAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CAA 72 bp TGTGAGGTCTTCAGCAAAGCAGCTACCCTCAGCTCATaGACGACAGCATCCTGCCTGCAGGTGTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CEVFSKAATLSS*TTASCLQVWAA
Trigger: AGCAGCCCACACCTGCAGGCAGGATGCTGTCGTCAATGAGCTGAGGGTAGCTGCTTTGCTGAAGACCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp AGACATGAGGCAGGGGTTAATGCAGAACCACGGAACAGCACCTCTGATGACATCCATTTCACCGGCCCCTaGTGCGCCAGCCCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: RHEAGVNAEPRNSTSDDIHFTGP*CASPKE
Trigger: TTCCTTTGGGCTGGCGCAGCAGGGGCCGGTGAAATG...GATGTCATCAGAGGTGCTGTTCCGTGGTTCTGCATTAACCCCTGCCTCATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp CTTCAAAGAGCGAATAGGGTCTGTCAGGAATGCGGCACCCGTGTGCTCCGTAATACGTACTGCTTCCGGTaGCACTGGTACAACAGCGGG +
Preference number: 4 (lower is better)
Translates to: LQRANRVCQECGTRVLRNTYCFR*HWYNSG
Trigger: CCCGCTGTTGTACCAGTGGCACCGGAAGCAGTACGT...ATTACGGAGCACACGGGTGCCGCATTCCTGACAGACCCTATTCGCTCTTTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp GCGCCGTGGCACCAGTGCACCAGCCGGTCTGTTTCATTGCTTAATGATGATGGGGGAAGGAATAGCCGTTaGCAGCAGTCCCATGGCATA +
Preference number: 4 (lower is better)
Translates to: APWHQCTSRSVSLLNDDGGRNSR*QQSHGI
Trigger: TATGCCATGGGACTGCTGGCAACGGCTATTCCTTCC...CCCATCATCATTAAGCAATGAAACAGACCGGCTGGTGCACTGGTGCCACGGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp AGCCCTTCCGCAGCAAACCTCGCTGCCAAATCACATCGCTACACTCCATGGCCTGCCTGTGACGGTGTCTaGTTCTCTTTCAGGATTCCC +
Preference number: 4 (lower is better)
Translates to: SPSAANLAAKSHRYTPWPACDGV*FSFRIP
Trigger: GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGC...AGGCCATGGAGTGTAGCGATGTGATTTGGCAGCGAGGTTTGCTGCGGAAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp GACTGGGCTGTTAAGAGAGGCCTCTTGTCTTTCATGACACAAGCCTTAGCTCACACTGGGGCTGGGAAATaGTCAGGCCTCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DWAVKRGLLSFMTQALAHTGAGK*SGLPLQ
Trigger: CTGCAGGGGGAGGCCTGAGCATTTCCCAGCCCCAGT...GTGAGCTAAGGCTTGTGTCATGAAAGACAAGAGGCCTCTCTTAACAGCCCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GCTAGTCTAACCAGAGGGGCCTGTGACGGTGTCTGCTTCTCTTTCAGGATTCCCTGTGGGCTGCTGGACTaGCTGCAAAGCCCATCAACA +
Preference number: 4 (lower is better)
Translates to: ASLTRGACDGVCFSFRIPCGLLD*LQSPST
Trigger: TGTTGATGGGCTTTGCAGGCAGTCCAGCAGCCCACA...GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTTAGACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTTGCCTGGAGGGACCGAGCTGGGCTGTGTTGCCTACTaGCTTCCCTTGAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: PLSCEVSPVSPLPGGTELGCVAY*LPLRNG
Trigger: CCCATTTCTCAAGGGAAGCCAGTAGGCAACACAGCC...CAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTAGTCCGGGAAGGGGTTaGCGAACGCCCGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGSPGRG*RTPVPP
Trigger: TGGAGGAACGGGCGTTCGTCAACCCCTTCCCGGACT...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp GCGCCGTGGCACCAGTGCACCAGCCGGTCTGTTTCATTGCTTAATGATGATGGGAGGCCTCCTGTGTCTTaGCCTTTGGTTTCTACTTCC +
Preference number: 4 (lower is better)
Translates to: APWHQCTSRSVSLLNDDGRPPVS*PLVSTS
Trigger: GGAAGTAGAAACCAAAGGTCAAGACACAGGAGGCCT...CCCATCATCATTAAGCAATGAAACAGACCGGCTGGTGCACTGGTGCCACGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp GGAGCCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTCTGGCGCCTTTGCCCTaGTCCCGACGGAGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: GACFSNIYLGKCSGTASALAPLP*SRRRGA
Trigger: CGCTCCTCTCCGTCGGGAGCAGGGCAAAGGCGCCAG...AGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp CCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTTGCCTGGAGGGACCGAGCTGGGCATACAGATAACCTaGCCGTCCATAAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PLSCEVSPVSPLPGGTELGIQIT*PSIKQL
Trigger: GAGCTGCTTTATGGACGGGCAGGTTATCTGTATGCC...CAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp TTAATAGCTGACTCACACACGGTGCCTGGACCTATCTCTGTGTTCAGGTACAGTGCGCCGTGGCACCAGTaGACCAGCCGGTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: LIADSHTVPGPISVFRYSAPWHQ*TSRSVS
Trigger: TGAAACAGACCGGCTGGTGCACTGGTGCCACGGCGC...ACTGTACCTGAACACAGAGATAGGTCCAGGCACCGTGTGTGAGTCAGCTATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTACCCCAGCACGCCCCTaGAGAACTGCTGGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGTPARP*RTAGPV
Trigger: GACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGGGT...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp AACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAACCAGTGCTTAGTCACTaGTGCCTACAGTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: NCWSCPSLEWSLPHSHLEPVLSH*CLQCGH
Trigger: ATGGCCACACTGTAGGCAGCAGTGACTAAGCACTGG...TTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTGCTCAGGCCTCCCCCTaGAGACAAGGACTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGAQASP*RQGLGC
Trigger: ACAGCCCAGTCCTTGTCTGCAGGGGGAGGCCTGAGC...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTTCCTGCCTGCAGGTGTaGGCTGCTGGACTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGSCLQV*AAGLPA
Trigger: TGCAGGCAGTCCAGCAGCCCACACCTGCAGGCAGGA...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACAGAAAAGGCTTCCCTTGAGAAATaGGGAGGCAGGACCTCTACT +
Preference number: 4 (lower is better)
Translates to: PSLEWSLPHSHLEGATEKASLEK*GGRTST
Trigger: AGTAGAGGTCCTGCCTCCCCATTTCTCAAGGGAAGC...CTTTTCTGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CAA 72 bp AGTGTGGCCATCAAAGGCTTCTTGGGAAAGCTCCCTTaGGGTCCAGAAGTCTCCCCAACAAAGCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SVAIKGFLGKLP*GPEVSPTKLQL
Trigger: CAGCTGGAGCTTTGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGCCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp CATGGGCTGCTCCAACGTACTGCTTCCGGTGCCACTGGTACAACAGCGGGCAGCACTCACAGTCACTTCTaGGTTTGTGATAAATCACAG +
Preference number: 4 (lower is better)
Translates to: HGLLQRTASGATGTTAGSTHSHF*VCDKSQ
Trigger: CTGTGATTTATCACAAACTCAGAAGTGACTGTGAGT...GCTGCCCGCTGTTGTACCAGTGGCACCGGAAGCAGTACGTTGGAGCAGCCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR TCA 90 bp GCTAGTCTAACCAGAGGGGCCTGTGACGGTGTCTGCTTCTCTTTCAGGATTCCCACTTCTTATCCTGCGTaGGACGGTAAAGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: ASLTRGACDGVCFSFRIPTSYPA*DGKGTG
Trigger: TCCTGTCCCTTTACCGTCTCACGCAGGATAAGAAGT...GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTTAGACTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254770.3
ENST00000452107.6
CDS-3UTR TCA 90 bp CCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACAGAAAAGGCTGAGATTGGACATCGTGTaGGGTCTTCAGCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PWSGRSLILIWKVPQKRLRLDIV*GLQQSS
Trigger: GCTGCTTTGCTGAAGACCTCACACGATGTCCAATCT...CAGCCTTTTCTGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp GCTAGTCTAACCAGAGGGGCCTGTGACGGTGTCTGCTTCTCTTTCAGGATTCCCCAATCCTCTGTCCTGTaGAGTAAGTCCCGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASLTRGACDGVCFSFRIPQSSVL*SKSRFS
Trigger: GGAGAAACGGGACTTACTTCACAGGACAGAGGATTG...GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTTAGACTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp AGCCCTTCCGCAGCAAACCTCGCTGCCAAATCACATCGCTACACTCCATGGCCTGGTACAAAAGGGCTATaGCTGTCCAGCCAGTATAAG +
Preference number: 4 (lower is better)
Translates to: SPSAANLAAKSHRYTPWPGTKGL*LSSQYK
Trigger: CTTATACTGGCTGGACAGGCATAGCCCTTTTGTACC...AGGCCATGGAGTGTAGCGATGTGATTTGGCAGCGAGGTTTGCTGCGGAAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp GCAGGTACAAAAGGGCTATGCCTGTCCAGCCAGTATAAGCAGAGCAGTCATGGGCTGACTCACACACGGTaGCTGGACCTATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: AGTKGLCLSSQYKQSSHGLTHTR*LDLSLC
Trigger: ACACAGAGATAGGTCCAGGCACCGTGTGTGAGTCAG...CCCATGACTGCTCTGCTTATACTGGCTGGACAGGCATAGCCCTTTTGTACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp CTAGACACCACTCTGCAAACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGAGCCATGCCATGGGCTaGTCCAACGTACTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: LDTTLQTCKLGRGTSYPASHAMG*SNVLLP
Trigger: CGGAAGCAGTACGTTGGAGCAGCCCATGGCATGGCT...CGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGTTTGCAGAGTGGTGTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp CCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACAGAAAAGGCTGAGTAAATTCCAGCCATaGCATGGGCTGCTCCAACGT +
Preference number: 4 (lower is better)
Translates to: PWSGRSLILIWKVPQKRLSKFQP*HGLLQR
Trigger: ACGTTGGAGCAGCCCATGGCATGGCTGGAATTTACT...CAGCCTTTTCTGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GCCATCAAAGGCTTCTTGGGAAAGCTCCCTTTGGGTCCAGAAGTCTCCCCAACAGGAAGGAATAGCCGTTaGCAGCAGTCCCATGGCATA +
Preference number: 4 (lower is better)
Translates to: AIKGFLGKLPLGPEVSPTGRNSR*QQSHGI
Trigger: TATGCCATGGGACTGCTGGCAACGGCTATTCCTTCC...TGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GCTAGTCTAACCAGAGGGGCCTGTGACGGTGTCTGCTTCTCTTTCAGGATTCCCACTGCCATACATTCATaGATGGTCAGCTCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: ASLTRGACDGVCFSFRIPTAIHS*MVSSEP
Trigger: GGGCTCAGAGCTGACCATGCATGAATGTATGGCAGT...GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTTAGACTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp ACCCTAGATAATCTTTCTGATATACAAGATAGACACCACCTGTTCCCTCATTTGCTCGCACCTTCCCCGTaGCCCGCAGAGCCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: TLDNLSDIQDRHHLFPHLLAPSP*PAEPVR
Trigger: GCGGACGGGCTCTGCGGGCCACGGGGAAGGTGCGAG...CAAATGAGGGAACAGGTGGTGTCTATCTTGTATATCAGAAAGATTATCTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp GCTAGTCTAACCAGAGGGGCCTGTGACGGTGTCTGCTTCTCTTTCAGGATTCCCGGAAGGTCTGATTCTTaGCAGACAACCGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: ASLTRGACDGVCFSFRIPGRSDS*QTTDLW
Trigger: CCAGAGATCGGTTGTCTGCCAAGAATCAGACCTTCC...GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTTAGACTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254770.3
ENST00000452107.6
CDS-3UTR CCA 90 bp CCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACAGAAAAGGCTGTCTGTCAAGGTTTCTTaGTCCACTTTTGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: PWSGRSLILIWKVPQKRLSVKVS*STFAAG
Trigger: GCCGGCAGCAAAAGTGGACCAAGAAACCTTGACAGA...CAGCCTTTTCTGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp GACTGGGCTGTTAAGAGAGGCCTCTTGTCTTTCATGACACAAGCCTTAGCTCACTGGAGAGCACCGTGCTaGCTGTGTTGCCTACTGGCT +
Preference number: 4 (lower is better)
Translates to: DWAVKRGLLSFMTQALAHWRAPC*LCCLLA
Trigger: AGCCAGTAGGCAACACAGCCAGCACGGTGCTCTCCA...GTGAGCTAAGGCTTGTGTCATGAAAGACAAGAGGCCTCTCTTAACAGCCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp TTGGTCACATGTGACCCGGTACAACTGCAGGTACAAAAGGGCTATGCCTGTCCAAGGTTTGGTCACATGTaGCCCGGTACAACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LVTCDPVQLQVQKGYACPRFGHM*PGTTAG
Trigger: ACCTGCAGTTGTACCGGGTCACATGTGACCAAACCT...TGGACAGGCATAGCCCTTTTGTACCTGCAGTTGTACCGGGTCACATGTGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR TCA 90 bp CACTCCATGGCCTCTTTCAAGTACTTCTCCTCCTTAAAGACCTTGTACGCCTGCAACCAGAGGGGCCTGTaGCGGTGTCTGCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: HSMASFKYFSSLKTLYACNQRGL*RCLLLF
Trigger: AAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTT...GCAGGCGTACAAGGTCTTTAAGGAGGAGAAGTACTTGAAAGAGGCCATGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR TCA 90 bp AGACATGAGGCAGGGGTTAATGCAGAACCACGGAACAGCACCTCTGATGACATCATGCATGGTCAGCTCTaGGCCCTCAGGAATAGAAGG +
Preference number: 4 (lower is better)
Translates to: RHEAGVNAEPRNSTSDDIMHGQL*ALRNRR
Trigger: CCTTCTATTCCTGAGGGCTCAGAGCTGACCATGCAT...GATGTCATCAGAGGTGCTGTTCCGTGGTTCTGCATTAACCCCTGCCTCATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp CTTCAAAGAGCGAATAGGGTCTGTCAGGAATGCGGCACCCGTGTGCTCCGTAATGTGACCCGGTACAACTaGAGGTACAAAAGGGCTATG +
Preference number: 4 (lower is better)
Translates to: LQRANRVCQECGTRVLRNVTRYN*RYKRAM
Trigger: CATAGCCCTTTTGTACCTGCAGTTGTACCGGGTCAC...ATTACGGAGCACACGGGTGCCGCATTCCTGACAGACCCTATTCGCTCTTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTGCTGCTCCAACGTACTaGTTCCGGTGCCACTGGTAC +
Preference number: 4 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGAAPTY*FRCHWY
Trigger: GTACCAGTGGCACCGGAAGCAGTACGTTGGAGCAGC...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254770.3
ENST00000452107.6
CDS-3UTR GCA 90 bp ACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTGCTGCCTACCCTGGAGAGCACCGTaGTGGCTGTGTTGCCTACTG +
Preference number: 4 (lower is better)
Translates to: TYTWVNVLELPVLSHCCLPWRAP*WLCCLL
Trigger: CAGTAGGCAACACAGCCAGCACGGTGCTCTCCAGGG...TAGGCAGCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp AGACATGAGGCAGGGGTTAATGCAGAACCACGGAACAGCACCTCTGATGACATCCTCACACACGGTGCCTaGACCTATCTCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RHEAGVNAEPRNSTSDDILTHGA*TYLCVQ
Trigger: CTGAACACAGAGATAGGTCCAGGCACCGTGTGTGAG...GATGTCATCAGAGGTGCTGTTCCGTGGTTCTGCATTAACCCCTGCCTCATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp ATATCCCGTAGCCCTTCCGCAGCAAACCTCGCTGCCAAATCACATCGCTACACTTCTGTCAAGGTTTCTTaGTCCACTTTTGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: ISRSPSAANLAAKSHRYTSVKVS*STFAAG
Trigger: GCCGGCAGCAAAAGTGGACCAAGAAACCTTGACAGA...AGTGTAGCGATGTGATTTGGCAGCGAGGTTTGCTGCGGAAGGGCTACGGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CCA 90 bp CCCGTAGCCCTTCCGCAGCAAACCTCGCTGCCAAATCACATCGCTACACTCCATCATCGCTACACTCCATaGCCTCTTTCAAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: PVALPQQTSLPNHIATLHHRYTP*PLSSTS
Trigger: AGAAGTACTTGAAAGAGGCCATGGAGTGTAGCGATG...ATGGAGTGTAGCGATGTGATTTGGCAGCGAGGTTTGCTGCGGAAGGGCTACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CCA 90 bp CCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACAGAAAAGGCTGTCCCTCATTCTCATCTaGAAGGTGCCACAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: PWSGRSLILIWKVPQKRLSLILI*KVPQKR
Trigger: CCTTTTCTGTGGCACCTTCCAGATGAGAATGAGGGA...CAGCCTTTTCTGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTGAGAGGTGTGGACACTaGGGCTGGGAAATGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGERCGH*GWEMLR
Trigger: CCTGAGCATTTCCCAGCCCCAGTGTCCACACCTCTC...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp AACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAACTGGAGGGACCGAGCTaGAATTACTGTCACATGTTA +
Preference number: 4 (lower is better)
Translates to: NCWSCPSLEWSLPHSHLELEGPS*NYCHML
Trigger: TAACATGTGACAGTAATTCCAGCTCGGTCCCTCCAG...TTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp GGAGCCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTCCCCACAGAGGAAGGTaGCCCTGCGGCCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: GACFSNIYLGKCSGTASAPHRGR*PCGHSD
Trigger: ATCTGAATGGCCGCAGGGTCACCTTCCTCTGTGGGG...AGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp GTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACTTTTCTTTCTTCCCTTaGCAAAGTCTTACCCGATTC +
Preference number: 4 (lower is better)
Translates to: VLSVLGVVAPSFSSGRCHFSFFP*QSLTRF
Trigger: GAATCGGGTAAGACTTTGTCAAGGGAAGAAAGAAAA...GTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp GCTGCCAAATCACATCGCTACACTCCATGGCCTCTTTCAAGTACTTCTCCTCCTAAATGCTGGAAACCGTaGTGTCTCTGGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AAKSHRYTPWPLSSTSPPKCWKP*CLWSQD
Trigger: GTCCTGGGACCAGAGACATCACGGTTTCCAGCATTT...AGGAGGAGAAGTACTTGAAAGAGGCCATGGAGTGTAGCGATGTGATTTGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR TCA 90 bp GGCTGTGTTGCCTACTGGCTTCCCTTGAGAAATGGGGAGGCAGGACCTCTACTGTGCCACAGAAAAGGCTaGCAATGTATTATCACTAGG +
Preference number: 4 (lower is better)
Translates to: GCVAYWLPLRNGEAGPLLCHRKG*QCIITR
Trigger: CCTAGTGATAATACATTGTCAGCCTTTTCTGTGGCA...CAGTAGAGGTCCTGCCTCCCCATTTCTCAAGGGAAGCCAGTAGGCAACACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp GCTAGTCTAACCAGAGGGGCCTGTGACGGTGTCTGCTTCTCTTTCAGGATTCCCAGCTGCAATGCACTCTaGGGCTTCTTTAAAACACGA +
Preference number: 4 (lower is better)
Translates to: ASLTRGACDGVCFSFRIPSCNAL*GFFKTR
Trigger: TCGTGTTTTAAAGAAGCCTCAGAGTGCATTGCAGCT...GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTTAGACTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp TTGGTCACATGTGACCCGGTACAACTGCAGGTACAAAAGGGCTATGCCTGTCCAGGCATACAGATAACCTaGCCGTCCATAAAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LVTCDPVQLQVQKGYACPGIQIT*PSIKQL
Trigger: GAGCTGCTTTATGGACGGGCAGGTTATCTGTATGCC...TGGACAGGCATAGCCCTTTTGTACCTGCAGTTGTACCGGGTCACATGTGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp CCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTTGCCTGGAGGGACCGAGCTGCAGAAAAGTGGACACTaGCATACATTCATGCATGGT +
Preference number: 4 (lower is better)
Translates to: PLSCEVSPVSPLPGGTELQKSGH*HTFMHG
Trigger: ACCATGCATGAATGTATGGCAGTGTCCACTTTTCTG...CAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp AGACATGAGGCAGGGGTTAATGCAGAACCACGGAACAGCACCTCTGATGACATCCAACAAAGCTCCAGCTaGCCTGGACTCTACACAAAG +
Preference number: 4 (lower is better)
Translates to: RHEAGVNAEPRNSTSDDIQQSSS*PGLYTK
Trigger: CTTTGTGTAGAGTCCAGGGCAGCTGGAGCTTTGTTG...GATGTCATCAGAGGTGCTGTTCCGTGGTTCTGCATTAACCCCTGCCTCATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp CTTGTCTTTCATGACACAAGCCTTAGCTCACAAGACGAGAAGTACCTAGTCCCACCGTGCTGGCTGTGTTaGCTACTGGCTTCCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LVFHDTSLSSQDEKYLVPPCWLC*LLASLE
Trigger: CTCAAGGGAAGCCAGTAGGCAACACAGCCAGCACGG...TGGGACTAGGTACTTCTCGTCTTGTGAGCTAAGGCTTGTGTCATGAAAGACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp ACACCACTCTGCAAACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGTGAGCTCACACACGGTGCCTaGACCTATCTCTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: TPLCKLASSVEVLLILRELTHGA*TYLCVQ
Trigger: CTGAACACAGAGATAGGTCCAGGCACCGTGTGTGAG...CTCACGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGTTTGCAGAGTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CCA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTATTCCAGCCATGCCATaGGCTGCTCCAACGTACTGC +
Preference number: 4 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGIPAMP*AAPTYC
Trigger: GCAGTACGTTGGAGCAGCCCATGGCATGGCTGGAAT...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254770.3
ENST00000452107.6
CDS-3UTR CCA 90 bp TTAATAGCTGACTCACACACGGTGCCTGGACCTATCTCTGTGTTCAGGTACAGTATTCCAGCCATGCCATaGGCTGCTCCAACGTACTGC +
Preference number: 4 (lower is better)
Translates to: LIADSHTVPGPISVFRYSIPAMP*AAPTYC
Trigger: GCAGTACGTTGGAGCAGCCCATGGCATGGCTGGAAT...ACTGTACCTGAACACAGAGATAGGTCCAGGCACCGTGTGTGAGTCAGCTATTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CCA 90 bp GACTGGGCTGTTAAGAGAGGCCTCTTGTCTTTCATGACACAAGCCTTAGCTCACCCCATCAACAGGCCCTaGAGGCCAGGTAAAATAGGA +
Preference number: 4 (lower is better)
Translates to: DWAVKRGLLSFMTQALAHPINRP*RPGKIG
Trigger: TCCTATTTTACCTGGCCTCCAGGGCCTGTTGATGGG...GTGAGCTAAGGCTTGTGTCATGAAAGACAAGAGGCCTCTCTTAACAGCCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CAA 72 bp CCTGCAGACAAGGACTGGGCTGTTAAGAGAGGCCTCTaGTCTTTCATGACACAAGCCTTAGCTCACAAGACG +
Preference number: 4 (lower is better)
Translates to: PADKDWAVKRGL*SFMTQALAHKT
Trigger: CGTCTTGTGAGCTAAGGCTTGTGTCATGAAAGACAAGAGGCCTCTCTTAACAGCCCAGTCCTTGTCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp ACACCACTCTGCAAACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGTGAGACATCAGAGAGAAAGTaGATAGCGCCAGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: TPLCKLASSVEVLLILRETSERK*IAPAMP
Trigger: AGGCATGGCTGGCGCTATTCACTTTCTCTCTGATGT...CTCACGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGTTTGCAGAGTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR TCA 90 bp GCCATCAAAGGCTTCTTGGGAAAGCTCCCTTTGGGTCCAGAAGTCTCCCCAACAGCTGTTAGAAAATGTTaGTGGATGGCTTCGGTCACT +
Preference number: 4 (lower is better)
Translates to: AIKGFLGKLPLGPEVSPTAVRKC*WMASVT
Trigger: AGTGACCGAAGCCATCCATCAACATTTTCTAACAGC...TGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp GCCATCAAAGGCTTCTTGGGAAAGCTCCCTTTGGGTCCAGAAGTCTCCCCAACAGCATCGTTTAGAAGCTaGATGTCACACATTTCGGGT +
Preference number: 4 (lower is better)
Translates to: AIKGFLGKLPLGPEVSPTASFRS*MSHISG
Trigger: ACCCGAAATGTGTGACATTCAGCTTCTAAACGATGC...TGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp CCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTTGTTCCTGGCGCCTTTaGCCTGCTCCCGACGGAGAG +
Preference number: 4 (lower is better)
Translates to: PVLVTYTWVNVLELPVLSCSWRL*PAPDGE
Trigger: CTCTCCGTCGGGAGCAGGGCAAAGGCGCCAGGAACA...ACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp TTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTGCCCGTTCCTCCATTTCTaGCTCCCCTCCCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LVTYTWVNVLELPVLSHCPFLHF*LPSQVE
Trigger: CTCCACCTGGGAGGGGAGGCAGAAATGGAGGAACGG...GCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp TGCTTCCGGTGCCACTGGTACAACAGCGGGCAGCGCTCCGTTTTTCTTTCTTCCGCCGGTCTGTTTCATTaGTTAATGATGATGGGTAAT +
Preference number: 4 (lower is better)
Translates to: CFRCHWYNSGQRSVFLSSAGLFH*LMMMGN
Trigger: ATTACCCATCATCATTAAGCAATGAAACAGACCGGC...GGAAGAAAGAAAAACGGAGCGCTGCCCGCTGTTGTACCAGTGGCACCGGAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CCA 90 bp CCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTTGCTCTGCAGACACCTaGCTGCACCCGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PVLVTYTWVNVLELPVLSCSADT*LHPLPP
Trigger: AGGAGGCAGCGGGTGCAGCCAGGTGTCTGCAGAGCA...ACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp GGAGCCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTCCTAGGCCACCTTTGTaGCTGCTCTGCAGACACCTG +
Preference number: 4 (lower is better)
Translates to: GACFSNIYLGKCSGTASAPRPPL*LLCRHL
Trigger: CAGGTGTCTGCAGAGCAGCCACAAAGGTGGCCTAGG...AGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp GGAGCCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTGTGGATGGACTCACCTaGGGAGACACCCGCATCCTA +
Preference number: 4 (lower is better)
Translates to: GACFSNIYLGKCSGTASAVDGLT*GDTRIL
Trigger: TAGGATGCGGGTGTCTCCCCAGGTGAGTCCATCCAC...AGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CAA 72 bp AATCCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTaGCCTGGAGGGACCGAGCTGGAATTACTGTCACAT +
Preference number: 4 (lower is better)
Translates to: NPLSCEVSPVSP*PGGTELELLSH
Trigger: ATGTGACAGTAATTCCAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp GGAGCCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTGAGCTTCAGCCTCTTTaGCATGGTCTCGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: GACFSNIYLGKCSGTASAELQPL*HGLAHL
Trigger: GAGATGGGCGAGACCATGTCAAAGAGGCTGAAGCTC...AGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp GACTGGGCTGTTAAGAGAGGCCTCTTGTCTTTCATGACACAAGCCTTAGCTCACGCTGCAAAAGTTTTGTaGCACATTCCTGGGACTCAC +
Preference number: 4 (lower is better)
Translates to: DWAVKRGLLSFMTQALAHAAKVL*HIPGTH
Trigger: GTGAGTCCCAGGAATGTGTCACAAAACTTTTGCAGC...GTGAGCTAAGGCTTGTGTCATGAAAGACAAGAGGCCTCTCTTAACAGCCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp CTAGACACCACTCTGCAAACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGGCTGCAAAAGTTTTGTaGCACATTCCTGGGACTCAC +
Preference number: 4 (lower is better)
Translates to: LDTTLQTCKLGRGTSYPAAAKVL*HIPGTH
Trigger: GTGAGTCCCAGGAATGTGTCACAAAACTTTTGCAGC...CGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGTTTGCAGAGTGGTGTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR TCA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTCTCATCAGGAAGGTCTaGTTCTTGGCAGACAACCGA +
Preference number: 4 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGLIRKV*FLADNR
Trigger: TCGGTTGTCTGCCAAGAATCAGACCTTCCTGATGAG...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254770.3
ENST00000452107.6
CDS-3UTR TCA 90 bp CTTGTCTTTCATGACACAAGCCTTAGCTCACAAGACGAGAAGTACCTAGTCCCAAAATGCTGGAAACCGTaGTGTCTCTGGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LVFHDTSLSSQDEKYLVPKCWKP*CLWSQD
Trigger: GTCCTGGGACCAGAGACATCACGGTTTCCAGCATTT...TGGGACTAGGTACTTCTCGTCTTGTGAGCTAAGGCTTGTGTCATGAAAGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp GCTAGTCTAACCAGAGGGGCCTGTGACGGTGTCTGCTTCTCTTTCAGGATTCCCACAATGTTATTTGGATaGGATTGGACATCGTGTGAG +
Preference number: 4 (lower is better)
Translates to: ASLTRGACDGVCFSFRIPTMLFG*DWTSCE
Trigger: CTCACACGATGTCCAATCTCATCCAAATAACATTGT...GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTTAGACTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp TTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTGCCCTACTGGCTTCCCTTaGGAAATGGGGAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LVTYTWVNVLELPVLSHCPTGFP*EMGRQD
Trigger: GTCCTGCCTCCCCATTTCTCAAGGGAAGCCAGTAGG...GCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GACTGGGCTGTTAAGAGAGGCCTCTTGTCTTTCATGACACAAGCCTTAGCTCACAACAGTCTAAAACACTaGAAGGCTAGTCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: DWAVKRGLLSFMTQALAHNSLKH*KASLRG
Trigger: CCCTCGGAGACTAGCCTTGCAGTGTTTTAGACTGTT...GTGAGCTAAGGCTTGTGTCATGAAAGACAAGAGGCCTCTCTTAACAGCCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp TGCTTCCGGTGCCACTGGTACAACAGCGGGCAGCGCTCCGTTTTTCTTTCTTCCAGCCCTTCTTCCATTTaGTGCAGAAGATCTTTAATT +
Preference number: 4 (lower is better)
Translates to: CFRCHWYNSGQRSVFLSSSPSSI*CRRSLI
Trigger: AATTAAAGATCTTCTGCAGCAAATGGAAGAAGGGCT...GGAAGAAAGAAAAACGGAGCGCTGCCCGCTGTTGTACCAGTGGCACCGGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp ACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTGCTGCCTACTGACTCACACACGGTaGCTGGACCTATCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TYTWVNVLELPVLSHCCLLTHTR*LDLSLC
Trigger: ACACAGAGATAGGTCCAGGCACCGTGTGTGAGTCAG...TAGGCAGCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp TTAATAGCTGACTCACACACGGTGCCTGGACCTATCTCTGTGTTCAGGTACAGTAGTAAATTCCAGCCATaGCATGGGCTGCTCCAACGT +
Preference number: 4 (lower is better)
Translates to: LIADSHTVPGPISVFRYSSKFQP*HGLLQR
Trigger: ACGTTGGAGCAGCCCATGGCATGGCTGGAATTTACT...ACTGTACCTGAACACAGAGATAGGTCCAGGCACCGTGTGTGAGTCAGCTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp AACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGCCGGTCTGTTTCATTaGTTAATGATGATGGGTAAT +
Preference number: 4 (lower is better)
Translates to: NCWSCPSLEWSLPHSHLEAGLFH*LMMMGN
Trigger: ATTACCCATCATCATTAAGCAATGAAACAGACCGGC...TTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp ACCCTAGATAATCTTTCTGATATACAAGATAGACACCACCTGTTCCCTCATTTGGCGCCGTGGCACCAGTaGACCAGCCGGTCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: TLDNLSDIQDRHHLFPHLAPWHQ*TSRSVS
Trigger: TGAAACAGACCGGCTGGTGCACTGGTGCCACGGCGC...CAAATGAGGGAACAGGTGGTGTCTATCTTGTATATCAGAAAGATTATCTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp CTTGTCTTTCATGACACAAGCCTTAGCTCACAAGACGAGAAGTACCTAGTCCCAGCCTGTGACGGTGTCTaGTTCTCTTTCAGGATTCCC +
Preference number: 4 (lower is better)
Translates to: LVFHDTSLSSQDEKYLVPACDGV*FSFRIP
Trigger: GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGC...TGGGACTAGGTACTTCTCGTCTTGTGAGCTAAGGCTTGTGTCATGAAAGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTCCATCAAAGGCTTCTTaGGAAAGCTCCCTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGPSKAS*ESSLWV
Trigger: GACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGG...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp GGAGCCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTCCTGCAGACAAGGACTaGGCTGTTAAGAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GACFSNIYLGKCSGTASAPADKD*AVKRGL
Trigger: GAGGCCTCTCTTAACAGCCCAGTCCTTGTCTGCAGG...AGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTTGTGGACACTGGGGCTaGGAAATGCTCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PVLVTYTWVNVLELPVLSCGHWG*EMLRPP
Trigger: GGGAGGCCTGAGCATTTCCCAGCCCCAGTGTCCACA...ACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CTTGTCTTTCATGACACAAGCCTTAGCTCACAAGACGAGAAGTACCTAGTCCCATCAAACGTGTGTGGATaGACTCACCTGGGGAGACAC +
Preference number: 4 (lower is better)
Translates to: LVFHDTSLSSQDEKYLVPSNVCG*THLGRH
Trigger: GTGTCTCCCCAGGTGAGTCCATCCACACACGTTTGA...TGGGACTAGGTACTTCTCGTCTTGTGAGCTAAGGCTTGTGTCATGAAAGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CAA 72 bp TCTTTTTACGTAATCCAGGGATCGGAGCAGGTAGGTTaGGTCACATGTGACCCGGTACAACTGCAGGTACAA +
Preference number: 4 (lower is better)
Translates to: SFYVIQGSEQVG*VTCDPVQLQVQ
Trigger: TTGTACCTGCAGTTGTACCGGGTCACATGTGACCAAACCTACCTGCTCCGATCCCTGGATTACGTAAAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR TCA 90 bp GCCATCAAAGGCTTCTTGGGAAAGCTCCCTTTGGGTCCAGAAGTCTCCCCAACAACTCACAGTCACTTCTaGGTTTGTGATAAATCACAG +
Preference number: 4 (lower is better)
Translates to: AIKGFLGKLPLGPEVSPTTHSHF*VCDKSQ
Trigger: CTGTGATTTATCACAAACTCAGAAGTGACTGTGAGT...TGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp CTTGTCTTTCATGACACAAGCCTTAGCTCACAAGACGAGAAGTACCTAGTCCCAACTTCTTATCCTGCGTaGGACGGTAAAGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: LVFHDTSLSSQDEKYLVPTSYPA*DGKGTG
Trigger: TCCTGTCCCTTTACCGTCTCACGCAGGATAAGAAGT...TGGGACTAGGTACTTCTCGTCTTGTGAGCTAAGGCTTGTGTCATGAAAGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp ACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTGCTGCCTAACATCAGAGAGAAAGTaGATAGCGCCAGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: TYTWVNVLELPVLSHCCLTSERK*IAPAMP
Trigger: AGGCATGGCTGGCGCTATTCACTTTCTCTCTGATGT...TAGGCAGCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp TCCCTCTTCGAAGAGTCAAGTTCAAATGCTGGAAACCGTGATGTCTCTGGTCCCGCTGTTAGAAAATGTTaGTGGATGGCTTCGGTCACT +
Preference number: 4 (lower is better)
Translates to: SLFEESSSNAGNRDVSGPAVRKC*WMASVT
Trigger: AGTGACCGAAGCCATCCATCAACATTTTCTAACAGC...GGGACCAGAGACATCACGGTTTCCAGCATTTGAACTTGACTCTTCGAAGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR TCA 90 bp AACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAATAATGTTGATAAACTaGGGTGGAGCCTGTTTTAGT +
Preference number: 4 (lower is better)
Translates to: NCWSCPSLEWSLPHSHLEIMLIN*GGACFS
Trigger: ACTAAAACAGGCTCCACCTCAGTTTATCAACATTAT...TTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGGACAGGACCAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp AAGTGTTCTTTTTACGTAATCCAGGGATCGGAGCAGGTAGGTTTGGTCACATGTCGCAGCAAACCTCGCTaGCAAATCACATCGCTACAC +
Preference number: 4 (lower is better)
Translates to: KCSFYVIQGSEQVGLVTCRSKPR*QITSLH
Trigger: GTGTAGCGATGTGATTTGGCAGCGAGGTTTGCTGCG...ACATGTGACCAAACCTACCTGCTCCGATCCCTGGATTACGTAAAAAGAACACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp CCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACAGAAAAGGCTGGTCTTTCTGTTAATCTaGAATAACCCATCTGGAACT +
Preference number: 4 (lower is better)
Translates to: PWSGRSLILIWKVPQKRLVFLLI*NNPSGT
Trigger: AGTTCCAGATGGGTTATTGCAGATTAACAGAAAGAC...CAGCCTTTTCTGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CTTGTCTTTCATGACACAAGCCTTAGCTCACAAGACGAGAAGTACCTAGTCCCAGGAAGGTCTGATTCTTaGCAGACAACCGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: LVFHDTSLSSQDEKYLVPGRSDS*QTTDLW
Trigger: CCAGAGATCGGTTGTCTGCCAAGAATCAGACCTTCC...TGGGACTAGGTACTTCTCGTCTTGTGAGCTAAGGCTTGTGTCATGAAAGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CTTGTCTTTCATGACACAAGCCTTAGCTCACAAGACGAGAAGTACCTAGTCCCACCATACATTCATGCATaGTCAGCTCTGAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LVFHDTSLSSQDEKYLVPPYIHA*SALSPQ
Trigger: CTGAGGGCTCAGAGCTGACCATGCATGAATGTATGG...TGGGACTAGGTACTTCTCGTCTTGTGAGCTAAGGCTTGTGTCATGAAAGACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp CCAGCCGGTCTGTTTCATTGCTTAATGATGATGGGTAATTCCCAGATCGGAATTTACCTCTTTAATAGCTaGCTCACACACGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PAGLFHCLMMMGNSQIGIYLFNS*LTHGAW
Trigger: CCAGGCACCGTGTGTGAGTCAGCTATTAAAGAGGTA...AATTCCGATCTGGGAATTACCCATCATCATTAAGCAATGAAACAGACCGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR TCA 90 bp ACCCTAGATAATCTTTCTGATATACAAGATAGACACCACCTGTTCCCTCATTTGCTACCCTCAGCTCATTaGCGACAGCATCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: TLDNLSDIQDRHHLFPHLLPSAH*RQHPAC
Trigger: GCAGGCAGGATGCTGTCGTCAATGAGCTGAGGGTAG...CAAATGAGGGAACAGGTGGTGTCTATCTTGTATATCAGAAAGATTATCTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GGAGCCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTGTGACCCGGTACAACTaGAGGTACAAAAGGGCTATG +
Preference number: 4 (lower is better)
Translates to: GACFSNIYLGKCSGTASAVTRYN*RYKRAM
Trigger: CATAGCCCTTTTGTACCTGCAGTTGTACCGGGTCAC...AGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp TTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTGCCGCAGCAAACCTCGCTaGCAAATCACATCGCTACAC +
Preference number: 4 (lower is better)
Translates to: LVTYTWVNVLELPVLSHCRSKPR*QITSLH
Trigger: GTGTAGCGATGTGATTTGGCAGCGAGGTTTGCTGCG...GCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp AAACACCAAGAAACATGCAAACACTACAGAGAATCTGTATGTGAAGAAGTCATACCTGCAGGTGTGGGCTaGTGGACTGCCTGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: KHQETCKHYRESVCEEVIPAGVG*WTACKA
Trigger: GGCTTTGCAGGCAGTCCAGCAGCCCACACCTGCAGG...TATGACTTCTTCACATACAGATTCTCTGTAGTGTTTGCATGTTTCTTGGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp TTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTGCTGGGAAAGCTCCCTTTaGGTCCAGAAGTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LVTYTWVNVLELPVLSHCWESSL*VQKSPQ
Trigger: TTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCA...GCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CTTGTCTTTCATGACACAAGCCTTAGCTCACAAGACGAGAAGTACCTAGTCCCATGTTATGTTTTGATGTaGTGGGTGGGGAGGATGGGA +
Preference number: 4 (lower is better)
Translates to: LVFHDTSLSSQDEKYLVPCYVLM*WVGRMG
Trigger: TCCCATCCTCCCCACCCACCACATCAAAACATAACA...TGGGACTAGGTACTTCTCGTCTTGTGAGCTAAGGCTTGTGTCATGAAAGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CTTGTCTTTCATGACACAAGCCTTAGCTCACAAGACGAGAAGTACCTAGTCCCATTTTTCAAACGTGTGTaGATGGACTCACCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LVFHDTSLSSQDEKYLVPFFKRV*MDSPGE
Trigger: CTCCCCAGGTGAGTCCATCCACACACGTTTGAAAAA...TGGGACTAGGTACTTCTCGTCTTGTGAGCTAAGGCTTGTGTCATGAAAGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp ACCCTAGATAATCTTTCTGATATACAAGATAGACACCACCTGTTCCCTCATTTGAACCAGAGGGGCCTGTaGCGGTGTCTGCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: TLDNLSDIQDRHHLFPHLNQRGL*RCLLLF
Trigger: AAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTT...CAAATGAGGGAACAGGTGGTGTCTATCTTGTATATCAGAAAGATTATCTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GCCATCAAAGGCTTCTTGGGAAAGCTCCCTTTGGGTCCAGAAGTCTCCCCAACACCTTCTTCCATTTGCTaGAGAAGATCTTTAATTTTG +
Preference number: 4 (lower is better)
Translates to: AIKGFLGKLPLGPEVSPTPSSIC*RRSLIL
Trigger: CAAAATTAAAGATCTTCTGCAGCAAATGGAAGAAGG...TGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GCCATCAAAGGCTTCTTGGGAAAGCTCCCTTTGGGTCCAGAAGTCTCCCCAACAAAACACCAAGAAACATaGAAACACTACAGAGAATCT +
Preference number: 4 (lower is better)
Translates to: AIKGFLGKLPLGPEVSPTKHQET*KHYRES
Trigger: AGATTCTCTGTAGTGTTTGCATGTTTCTTGGTGTTT...TGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTGAAAATGTTGATGGATaGCTTCGGTCACTCATGCTA +
Preference number: 4 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGENVDG*LRSLML
Trigger: TAGCATGAGTGACCGAAGCCATCCATCAACATTTTC...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254770.3
ENST00000452107.6
CDS-3UTR CCA 90 bp GCCATCAAAGGCTTCTTGGGAAAGCTCCCTTTGGGTCCAGAAGTCTCCCCAACATTAGTAACATATACCTaGGTAAATGTTCTGGAACTG +
Preference number: 4 (lower is better)
Translates to: AIKGFLGKLPLGPEVSPTLVTYT*VNVLEL
Trigger: CAGTTCCAGAACATTTACCCAGGTATATGTTACTAA...TGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp CCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTTACCTCTTTAATAGCTaGCTCACACACGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PVLVTYTWVNVLELPVLSYLFNS*LTHGAW
Trigger: CCAGGCACCGTGTGTGAGTCAGCTATTAAAGAGGTA...ACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp CCACTCTGCAAACTTGCAAGCTCGGTAGAGGTACTTCTTATCCTGCGTGAGACGCCTTCTTCCATTTGCTaGAGAAGATCTTTAATTTTG +
Preference number: 4 (lower is better)
Translates to: PLCKLASSVEVLLILRETPSSIC*RRSLIL
Trigger: CAAAATTAAAGATCTTCTGCAGCAAATGGAAGAAGG...CGTCTCACGCAGGATAAGAAGTACCTCTACCGAGCTTGCAAGTTTGCAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp CTTGTCTTTCATGACACAAGCCTTAGCTCACAAGACGAGAAGTACCTAGTCCCAACCGATCTCTGGAGCTaGAAAAGTTTTGTGACACAT +
Preference number: 4 (lower is better)
Translates to: LVFHDTSLSSQDEKYLVPTDLWS*KSFVTH
Trigger: ATGTGTCACAAAACTTTTGCAGCTCCAGAGATCGGT...TGGGACTAGGTACTTCTCGTCTTGTGAGCTAAGGCTTGTGTCATGAAAGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp CCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTTTCTGGAACTGCCAGTaGTTAGTCACTGCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: PVLVTYTWVNVLELPVLSFWNCQ*LVTAAY
Trigger: GTAGGCAGCAGTGACTAAGCACTGGCAGTTCCAGAA...ACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp TTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTGCTATGTTTTGATGTGGTaGGTGGGGAGGATGGGAACA +
Preference number: 4 (lower is better)
Translates to: LVTYTWVNVLELPVLSHCYVLMW*VGRMGT
Trigger: TGTTCCCATCCTCCCCACCCACCACATCAAAACATA...GCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp GTCTTTTTGCACCTTTTAATCCCTCTTCGAAGAGTCAAGTTCAAATGCTGGAAACTCATCAGGAAGGTCTaGTTCTTGGCAGACAACCGA +
Preference number: 4 (lower is better)
Translates to: VFLHLLIPLRRVKFKCWKLIRKV*FLADNR
Trigger: TCGGTTGTCTGCCAAGAATCAGACCTTCCTGATGAG...TTTCCAGCATTTGAACTTGACTCTTCGAAGAGGGATTAAAAGGTGCAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp CCAGCCGGTCTGTTTCATTGCTTAATGATGATGGGTAATTCCCAGATCGGAATTACCGATCTCTGGAGCTaGAAAAGTTTTGTGACACAT +
Preference number: 4 (lower is better)
Translates to: PAGLFHCLMMMGNSQIGITDLWS*KSFVTH
Trigger: ATGTGTCACAAAACTTTTGCAGCTCCAGAGATCGGT...AATTCCGATCTGGGAATTACCCATCATCATTAAGCAATGAAACAGACCGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR GCA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTAATGCTTTCTGGATTTaGCATTCCCTATTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGNAFWI*HSLLFW
Trigger: CCAAAACAATAGGGAATGGCAAATCCAGAAAGCATT...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CCA 90 bp GACTGGGCTGTTAAGAGAGGCCTCTTGTCTTTCATGACACAAGCCTTAGCTCACCCTCATTTGTCAATATaGAAGAAACCCCACTTTATA +
Preference number: 4 (lower is better)
Translates to: DWAVKRGLLSFMTQALAHPHLSI*KKPHFI
Trigger: TATAAAGTGGGGTTTCTTCCATATTGACAAATGAGG...GTGAGCTAAGGCTTGTGTCATGAAAGACAAGAGGCCTCTCTTAACAGCCCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTTCATCACCACAGAACTaGCTTTTACTAACAAAACCA +
Preference number: 4 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGSSPQN*LLLTKP
Trigger: TGGTTTTGTTAGTAAAAGCCAGTTCTGTGGTGATGA...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR TCA 90 bp AAGTGTTCTTTTTACGTAATCCAGGGATCGGAGCAGGTAGGTTTGGTCACATGTTTTTCTTTCTTCCCTTaGCAAAGTCTTACCCGATTC +
Preference number: 4 (lower is better)
Translates to: KCSFYVIQGSEQVGLVTCFSFFP*QSLTRF
Trigger: GAATCGGGTAAGACTTTGTCAAGGGAAGAAAGAAAA...ACATGTGACCAAACCTACCTGCTCCGATCCCTGGATTACGTAAAAAGAACACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CCA 90 bp AAACACCAAGAAACATGCAAACACTACAGAGAATCTGTATGTGAAGAAGTCATACTGCTGCCTACAGTGTaGCCATCAAAGGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KHQETCKHYRESVCEEVILLPTV*PSKASW
Trigger: CCAAGAAGCCTTTGATGGCCACACTGTAGGCAGCAG...TATGACTTCTTCACATACAGATTCTCTGTAGTGTTTGCATGTTTCTTGGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp AAACACCAAGAAACATGCAAACACTACAGAGAATCTGTATGTGAAGAAGTCATACGTTTCTCCTTTGCCTaGAGGGACCGAGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: KHQETCKHYRESVCEEVIRFSFA*RDRAGI
Trigger: AATTCCAGCTCGGTCCCTCCAGGCAAAGGAGAAACG...TATGACTTCTTCACATACAGATTCTCTGTAGTGTTTGCATGTTTCTTGGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp TTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTGCGGGAACAATGTTATTTaGATGAGATTGGACATCGTG +
Preference number: 4 (lower is better)
Translates to: LVTYTWVNVLELPVLSHCGNNVI*MRLDIV
Trigger: CACGATGTCCAATCTCATCCAAATAACATTGTTCCC...GCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp CCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTAGCCCTTCTTCCATTTaGTGCAGAAGATCTTTAATT +
Preference number: 4 (lower is better)
Translates to: PVLVTYTWVNVLELPVLSSPSSI*CRRSLI
Trigger: AATTAAAGATCTTCTGCAGCAAATGGAAGAAGGGCT...ACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR GCA 90 bp GTTGTCTTTTTGCACCTTTTAATCCCTCTTCGAAGAGTCAAGTTCAAATGCTGGGCTTCTGTTACTGAATaGACCAAAAAGAGTAACTGT +
Preference number: 4 (lower is better)
Translates to: VVFLHLLIPLRRVKFKCWASVTE*TKKSNC
Trigger: ACAGTTACTCTTTTTGGTGCATTCAGTAACAGAAGC...CCAGCATTTGAACTTGACTCTTCGAAGAGGGATTAAAAGGTGCAAAAAGACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CCA 90 bp AAACACCAAGAAACATGCAAACACTACAGAGAATCTGTATGTGAAGAAGTCATACATCGCTACACTCCATaGCCTCTTTCAAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: KHQETCKHYRESVCEEVIHRYTP*PLSSTS
Trigger: AGAAGTACTTGAAAGAGGCCATGGAGTGTAGCGATG...TATGACTTCTTCACATACAGATTCTCTGTAGTGTTTGCATGTTTCTTGGTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CCA 90 bp GTTGTCTTTTTGCACCTTTTAATCCCTCTTCGAAGAGTCAAGTTCAAATGCTGGATTAGCAATGCTTTCTaGATTTGCCATTCCCTATTG +
Preference number: 4 (lower is better)
Translates to: VVFLHLLIPLRRVKFKCWISNAF*ICHSLL
Trigger: CAATAGGGAATGGCAAATCCAGAAAGCATTGCTAAT...CCAGCATTTGAACTTGACTCTTCGAAGAGGGATTAAAAGGTGCAAAAAGACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR TCA 90 bp AAACACCAAGAAACATGCAAACACTACAGAGAATCTGTATGTGAAGAAGTCATAACACTTATCTTAAACTaGCTTCTGTCAATCCTCTGT +
Preference number: 4 (lower is better)
Translates to: KHQETCKHYRESVCEEVITLILN*LLSILC
Trigger: ACAGAGGATTGACAGAAGTCAGTTTAAGATAAGTGT...TATGACTTCTTCACATACAGATTCTCTGTAGTGTTTGCATGTTTCTTGGTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
3UTR CAA 72 bp TCTGATATACAAGATAGACACCACCTGTTCCCTCATTaGTCAATATGGAAGAAACCCCACTTTATACATTTT +
Preference number: 4 (lower is better)
Translates to: SDIQDRHHLFPH*SIWKKPHFIHF
Trigger: AAAATGTATAAAGTGGGGTTTCTTCCATATTGACAAATGAGGGAACAGGTGGTGTCTATCTTGTATATCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS CCA 90 bp GCCCAGCGGCTCACAGCCTGCTCGCGCCTCCTCGCACCTTCCCCGTaGCCCGCAGAGCCCGTCCGCGGCGACGCGCACGGCCGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: AQRLTACSRLLAPSP*PAEPVRGDAHGRGW
Trigger: CCAGCCCCGGCCGTGCGCGTCGCCGCGGACGGGCTCTGCGGGCCACGGGGAAGGTGCGAGGAGGCGCGAGCAGGCTGTGAGCCGCTGGGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS GCA 90 bp CGAGGCCGCGCGCTGGCGGGAGGAGCGGGGCGTCTGAGCGTGCACTaGCTCGTCGCGGGCTGCTCGCACATCAGGCGGCCGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: RGRALAGGAGRLSVH*LVAGCSHIRRPQRR
Trigger: CCGCCTCTGCGGCCGCCTGATGTGCGAGCAGCCCGCGACGAGGCAGTGCACGCTCAGACGCCCCGCTCCTCCCGCCAGCGCGCGGCCTCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS GCA 90 bp GCGGGAGGAGCGGGGCGTCTGAGCGTGCACTGCCTCGTCGCGGGCTaGTCGCACATCAGGCGGCCGCAGAGGCGGTGGGCGCTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: AGGAGRLSVHCLVAG*SHIRRPQRRWALCL
Trigger: GAGGCACAGCGCCCACCGCCTCTGCGGCCGCCTGATGTGCGAGCAGCCCGCGACGAGGCAGTGCACGCTCAGACGCCCCGCTCCTCCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS CCA 90 bp CAGGCGGCCGCAGAGGCGGTGGGCGCTGTGCCTCTGCCCTGTTCCTaGCGCCTTTGCCCTGCTCCCGACGGAGAGGAGCGGGCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: QAAAEAVGAVPLPCS*RLCPAPDGEERARG
Trigger: CCCGCGAGCCCGCTCCTCTCCGTCGGGAGCAGGGCAAAGGCGCCAGGAACAGGGCAGAGGCACAGCGCCCACCGCCTCTGCGGCCGCCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS TCA 90 bp TCTAGGAGGAGCGAGGCCGCGCGCTGGCGGGAGGAGCGGGGCGTCTaGGCGTGCACTGCCTCGTCGCGGGCTGCTCGCACATCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: SRRSEAARWREERGV*ACTASSRAARTSGG
Trigger: GCCGCCTGATGTGCGAGCAGCCCGCGACGAGGCAGTGCACGCTCAGACGCCCCGCTCCTCCCGCCAGCGCGCGGCCTCGCTCCTCCTAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS GCA 90 bp TGCTCGCACATCAGGCGGCCGCAGAGGCGGTGGGCGCTGTGCCTCTaGCCTGTTCCTGGCGCCTTTGCCCTGCTCCCGACGGAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: CSHIRRPQRRWALCL*PVPGAFALLPTERS
Trigger: GCTCCTCTCCGTCGGGAGCAGGGCAAAGGCGCCAGGAACAGGGCAGAGGCACAGCGCCCACCGCCTCTGCGGCCGCCTGATGTGCGAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS CCA 90 bp GTTTCTACTTCCCGTCCTGATGAAAAGGGAGGCCGGGCTCATCCGTaGTCGCCGGGGGACGAACACAGCCTGTCTCTTCGGCCGCTCCGG +
Preference number: 5 (lower is better)
Translates to: VSTSRPDEKGGRAHP*SPGDEHSLSLRPLR
Trigger: CCGGAGCGGCCGAAGAGACAGGCTGTGTTCGTCCCCCGGCGACCACGGATGAGCCCGGCCTCCCTTTTCATCAGGACGGGAAGTAGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS GCA 90 bp CTGCTTGCGGCTGCCTCAGCTGTAGAGTGGGGTCTGCCTTACAGCTaGTGGGAAGTCCGAGGTGAAAACCGAACGGCTCAACGACACTCT +
Preference number: 5 (lower is better)
Translates to: LLAAASAVEWGLPYS*WEVRGENRTAQRHS
Trigger: AGAGTGTCGTTGAGCCGTTCGGTTTTCACCTCGGACTTCCCAGCAGCTGTAAGGCAGACCCCACTCTACAGCTGAGGCAGCCGCAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466041.1
CDS CCA 90 bp CTTGCGGCTGCCTCAGCTGTAGAGTGGGGTCTGCCTTACAGCTGCTaGGAAGTCCGAGGTGAAAACCGAACGGCTCAACGACACTCTGTT +
Preference number: 5 (lower is better)
Translates to: LAAASAVEWGLPYSC*EVRGENRTAQRHSV
Trigger: AACAGAGTGTCGTTGAGCCGTTCGGTTTTCACCTCGGACTTCCCAGCAGCTGTAAGGCAGACCCCACTCTACAGCTGAGGCAGCCGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466041.1
CDS TCA 90 bp AGCTGTAGAGTGGGGTCTGCCTTACAGCTGCTGGGAAGTCCGAGGTaGAAACCGAACGGCTCAACGACACTCTGTTCTCCCTGGCACCTT +
Preference number: 5 (lower is better)
Translates to: SCRVGSALQLLGSPR*KPNGSTTLCSPWHL
Trigger: AAGGTGCCAGGGAGAACAGAGTGTCGTTGAGCCGTTCGGTTTTCACCTCGGACTTCCCAGCAGCTGTAAGGCAGACCCCACTCTACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466041.1
CDS-3UTR CAA 90 bp CCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTTGCCTGGAGGGACCGAGCTGGGAGCTTCAGCCTCTTaGACATGGTCTCGCCCATCT +
Preference number: 5 (lower is better)
Translates to: PLSCEVSPVSPLPGGTELGASAS*TWSRPS
Trigger: AGATGGGCGAGACCATGTCAAAGAGGCTGAAGCTCC...CAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp CCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTTGCCTGGAGGGACCGAGCTGGCCATCAAAGGCTTCTaGGGAAAGCTCCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: PLSCEVSPVSPLPGGTELAIKGF*GKLPLG
Trigger: ACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGC...CAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp CCCAGCACGCCCCTGCAGAACTGCTGGTCCTGTCCGTCCTTGGAGTGGTCGCTCAGAAGATCTTTAATTTaGGTCTGGATCCGTCTTATG +
Preference number: 5 (lower is better)
Translates to: PSTPLQNCWSCPSLEWSLRRSLI*VWIRLM
Trigger: CATAAGACGGATCCAGACCAAAATTAAAGATCTTCT...GAGCGACCACTCCAAGGACGGACAGGACCAGCAGTTCTGCAGGGGCGTGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp GCCATCAAAGGCTTCTTGGGAAAGCTCCCTTTGGGTCCAGAAGTCTCCCCAACATTGGGAAAGCTCCCTTaGGGTCCAGAAGTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: AIKGFLGKLPLGPEVSPTLGKLP*GPEVSP
Trigger: TGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAA...TGTTGGGGAGACTTCTGGACCCAAAGGGAGCTTTCCCAAGAAGCCTTTGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS CCA 90 bp AAGGCAATAAATGAGAATGCAATGTCTTCACAGGCATCAGGGAAGTaGACCCCCAGCTGTAGGGCATTCAGCGTGGGCTCCATGGGCTAC +
Preference number: 5 (lower is better)
Translates to: KAINENAMSSQASGK*TPSCRAFSVGSMGY
Trigger: GTAGCCCATGGAGCCCACGCTGAATGCCCTACAGCTGGGGGTCCACTTCCCTGATGCCTGTGAAGACATTGCATTCTCATTTATTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466041.1
CDS-3UTR CAA 90 bp CCGTCCTTGGAGTGGTCGCTCCCTCATTCTCATCTGGAAGGTGCCACAGAAAAGTTTCTTGGTCCACTTTaGCTGCCGGCTGCATTAACA +
Preference number: 5 (lower is better)
Translates to: PSLEWSLPHSHLEGATEKFLGPL*LPAALT
Trigger: TGTTAATGCAGCCGGCAGCAAAAGTGGACCAAGAAA...CTTTTCTGTGGCACCTTCCAGATGAGAATGAGGGAGCGACCACTCCAAGGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp GCTAGTCTAACCAGAGGGGCCTGTGACGGTGTCTGCTTCTCTTTCAGGATTCCCGTTAAGAGAGGCCTCTaGTCTTTCATGACACAAGCC +
Preference number: 5 (lower is better)
Translates to: ASLTRGACDGVCFSFRIPVKRGL*SFMTQA
Trigger: GGCTTGTGTCATGAAAGACAAGAGGCCTCTCTTAAC...GGGAATCCTGAAAGAGAAGCAGACACCGTCACAGGCCCCTCTGGTTAGACTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTGCTACCCTCAGCTCATaGACGACAGCATCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGATLSS*TTASCL
Trigger: CAGGCAGGATGCTGTCGTCAATGAGCTGAGGGTAGC...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp CTTGTCTTTCATGACACAAGCCTTAGCTCACAAGACGAGAAGTACCTAGTCCCAAGTCCCGTTTCTCCTTaGCCTGGAGGGACCGAGCTG +
Preference number: 5 (lower is better)
Translates to: LVFHDTSLSSQDEKYLVPSPVSP*PGGTEL
Trigger: CAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACT...TGGGACTAGGTACTTCTCGTCTTGTGAGCTAAGGCTTGTGTCATGAAAGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS TCA 90 bp TTTTTACGTAATCCAGGGATCGGAGCAGGTAGGTTTGGTCACATGTaGCCCGGTACAACTGCAGGTACAAAAGGGCTATGCCTTGGCCTC +
Preference number: 5 (lower is better)
Translates to: FLRNPGIGAGRFGHM*PGTTAGTKGLCLGL
Trigger: GAGGCCAAGGCATAGCCCTTTTGTACCTGCAGTTGTACCGGGTCACATGTGACCAAACCTACCTGCTCCGATCCCTGGATTACGTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486376.1
CDS-3UTR CAA 90 bp GGAGCCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTGGTCCTGTCCGTCCTaGGAGTGGTCGCTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: GACFSNIYLGKCSGTASAWSCPS*EWSLPH
Trigger: ATGAGGGAGCGACCACTCCAAGGACGGACAGGACCA...AGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp GCAGGTACAAAAGGGCTATGCCTGTCCAGCCAGTATAAGCAGAGCAGTCATGGGTTTCAGGATTCCCAGTaGTTTCTGTGTCAGGCACTA +
Preference number: 5 (lower is better)
Translates to: AGTKGLCLSSQYKQSSHGFQDSQ*FLCQAL
Trigger: TAGTGCCTGACACAGAAACAACTGGGAATCCTGAAA...CCCATGACTGCTCTGCTTATACTGGCTGGACAGGCATAGCCCTTTTGTACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CAA 90 bp CCCGTAGCCCTTCCGCAGCAAACCTCGCTGCCAAATCACATCGCTACACTCCATAGAAGATCTTTAATTTaGGTCTGGATCCGTCTTATG +
Preference number: 5 (lower is better)
Translates to: PVALPQQTSLPNHIATLHRRSLI*VWIRLM
Trigger: CATAAGACGGATCCAGACCAAAATTAAAGATCTTCT...ATGGAGTGTAGCGATGTGATTTGGCAGCGAGGTTTGCTGCGGAAGGGCTACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CAA 90 bp AAGTGTTCTTTTTACGTAATCCAGGGATCGGAGCAGGTAGGTTTGGTCACATGTTCGGAGCAGGTAGGTTaGGTCACATGTGACCCGGTA +
Preference number: 5 (lower is better)
Translates to: KCSFYVIQGSEQVGLVTCSEQVG*VTCDPV
Trigger: TACCGGGTCACATGTGACCAAACCTACCTGCTCCGA...ACATGTGACCAAACCTACCTGCTCCGATCCCTGGATTACGTAAAAAGAACACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CAA 90 bp CCTCTGTCCTGTGAAGTAAGTCCCGTTTCTCCTTTGCCTGGAGGGACCGAGCTGTTTTTCTTTCTTCCCTaGACAAAGTCTTACCCGATT +
Preference number: 5 (lower is better)
Translates to: PLSCEVSPVSPLPGGTELFFFLP*TKSYPI
Trigger: AATCGGGTAAGACTTTGTCAAGGGAAGAAAGAAAAA...CAGCTCGGTCCCTCCAGGCAAAGGAGAAACGGGACTTACTTCACAGGACAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp CTCTGGAGCTGCAAAAGTTTTGTGACACATTCCTGGGACTCACAGTCACTTCTGTTTCTTGGTCCACTTTaGCTGCCGGCTGCATTAACA +
Preference number: 5 (lower is better)
Translates to: LWSCKSFVTHSWDSQSLLFLGPL*LPAALT
Trigger: TGTTAATGCAGCCGGCAGCAAAAGTGGACCAAGAAA...CAGAAGTGACTGTGAGTCCCAGGAATGTGTCACAAAACTTTTGCAGCTCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CAA 90 bp ACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCACTGCTGCCTATTCTGTCAAGGTTTCTaGGTCCACTTTTGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: TYTWVNVLELPVLSHCCLFCQGF*VHFCCR
Trigger: CCGGCAGCAAAAGTGGACCAAGAAACCTTGACAGAA...TAGGCAGCAGTGACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp GACTGGGCTGTTAAGAGAGGCCTCTTGTCTTTCATGACACAAGCCTTAGCTCACCACCTGTTCCCTCATTaGTCAATATGGAAGAAACCC +
Preference number: 5 (lower is better)
Translates to: DWAVKRGLLSFMTQALAHHLFPH*SIWKKP
Trigger: GGGTTTCTTCCATATTGACAAATGAGGGAACAGGTG...GTGAGCTAAGGCTTGTGTCATGAAAGACAAGAGGCCTCTCTTAACAGCCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp CCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTCATCCTAGGCCACCTTaGTGGCTGCTCTGCAGACAC +
Preference number: 5 (lower is better)
Translates to: PVLVTYTWVNVLELPVLSHPRPP*WLLCRH
Trigger: GTGTCTGCAGAGCAGCCACAAAGGTGGCCTAGGATG...ACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp GGAGCCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTCCTCCTTAAAGACCTaGTACGCCTGCATGAGCATG +
Preference number: 5 (lower is better)
Translates to: GACFSNIYLGKCSGTASASSLKT*YACMSM
Trigger: CATGCTCATGCAGGCGTACAAGGTCTTTAAGGAGGA...AGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp CTGCAAAAGTTTTGTGACACATTCCTGGGACTCACAGTCACTTCTGAGTTTGTGTCCTCCTTAAAGACCTaGTACGCCTGCATGAGCATG +
Preference number: 5 (lower is better)
Translates to: LQKFCDTFLGLTVTSEFVSSLKT*YACMSM
Trigger: CATGCTCATGCAGGCGTACAAGGTCTTTAAGGAGGA...CACAAACTCAGAAGTGACTGTGAGTCCCAGGAATGTGTCACAAAACTTTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CAA 90 bp CAGGATTCCCAGTTGTTTCTGTGTCAGGCACTAAGCAATCTGGTGGCTTTTGGTGCAATCTGGTGGCTTTaGGTCCAAATGGGTATTTTA +
Preference number: 5 (lower is better)
Translates to: QDSQLFLCQALSNLVAFGAIWWL*VQMGIL
Trigger: TAAAATACCCATTTGGACCAAAAGCCACCAGATTGC...ACCAAAAGCCACCAGATTGCTTAGTGCCTGACACAGAAACAACTGGGAATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254770.3
ENST00000452107.6
CDS-3UTR CAA 90 bp ATTCCGAAGTGTTCTTTTTACGTAATCCAGGGATCGGAGCAGGTAGGTTTGGTCGCAATCTGGTGGCTTTaGGTCCAAATGGGTATTTTA +
Preference number: 5 (lower is better)
Translates to: IPKCSFYVIQGSEQVGLVAIWWL*VQMGIL
Trigger: TAAAATACCCATTTGGACCAAAAGCCACCAGATTGC...GACCAAACCTACCTGCTCCGATCCCTGGATTACGTAAAAAGAACACTTCGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CAA 90 bp TCATCAGGAAGGTCTGATTCTTGGCAGACAACCGATCTCTGGAGCTGCAAAAGTCAATGCTTTCTGGATTaGCCATTCCCTATTGTTTTG +
Preference number: 5 (lower is better)
Translates to: SSGRSDSWQTTDLWSCKSQCFLD*PFPIVL
Trigger: CAAAACAATAGGGAATGGCAAATCCAGAAAGCATTG...ACTTTTGCAGCTCCAGAGATCGGTTGTCTGCCAAGAATCAGACCTTCCTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CAA 90 bp AAACACCAAGAAACATGCAAACACTACAGAGAATCTGTATGTGAAGAAGTCATATCGGAGCAGGTAGGTTaGGTCACATGTGACCCGGTA +
Preference number: 5 (lower is better)
Translates to: KHQETCKHYRESVCEEVISEQVG*VTCDPV
Trigger: TACCGGGTCACATGTGACCAAACCTACCTGCTCCGA...TATGACTTCTTCACATACAGATTCTCTGTAGTGTTTGCATGTTTCTTGGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp TTAATAGCTGACTCACACACGGTGCCTGGACCTATCTCTGTGTTCAGGTACAGTTTTTTCTTTCTTCCCTaGACAAAGTCTTACCCGATT +
Preference number: 5 (lower is better)
Translates to: LIADSHTVPGPISVFRYSFFFLP*TKSYPI
Trigger: AATCGGGTAAGACTTTGTCAAGGGAAGAAAGAAAAA...ACTGTACCTGAACACAGAGATAGGTCCAGGCACCGTGTGTGAGTCAGCTATTAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CAA 90 bp GTCTTTTTGCACCTTTTAATCCCTCTTCGAAGAGTCAAGTTCAAATGCTGGAAATTCTGTCAAGGTTTCTaGGTCCACTTTTGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: VFLHLLIPLRRVKFKCWKFCQGF*VHFCCR
Trigger: CCGGCAGCAAAAGTGGACCAAGAAACCTTGACAGAA...TTTCCAGCATTTGAACTTGACTCTTCGAAGAGGGATTAAAAGGTGCAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452107.6
CDS-3UTR CAA 90 bp ACCCTAGATAATCTTTCTGATATACAAGATAGACACCACCTGTTCCCTCATTTGGTGATGTGTTATGTTTaGATGTGGTGGGTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: TLDNLSDIQDRHHLFPHLVMCYV*MWWVGR
Trigger: CCTCCCCACCCACCACATCAAAACATAACACATCAC...CAAATGAGGGAACAGGTGGTGTCTATCTTGTATATCAGAAAGATTATCTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp CCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTTTTCAGGATTCCCAGTaGTTTCTGTGTCAGGCACTA +
Preference number: 5 (lower is better)
Translates to: PVLVTYTWVNVLELPVLSFQDSQ*FLCQAL
Trigger: TAGTGCCTGACACAGAAACAACTGGGAATCCTGAAA...ACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS-3UTR CAA 90 bp CCTGTTTTAGTAACATATACCTGGGTAAATGTTCTGGAACTGCCAGTGCTTAGTTGGGAACAATGTTATTaGGATGAGATTGGACATCGT +
Preference number: 5 (lower is better)
Translates to: PVLVTYTWVNVLELPVLSWEQCY*DEIGHR
Trigger: ACGATGTCCAATCTCATCCAAATAACATTGTTCCCA...ACTAAGCACTGGCAGTTCCAGAACATTTACCCAGGTATATGTTACTAAAACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS CCA 72 bp CTCACAGCCTGCTCGCGCCTCCTCGCACCTTCCCCGTaGCCCGCAGAGCCCGTCCGCGGCGACGCGCACGGC +
Preference number: 6 (lower is better)
Translates to: LTACSRLLAPSP*PAEPVRGDAHG
Trigger: GCCGTGCGCGTCGCCGCGGACGGGCTCTGCGGGCCACGGGGAAGGTGCGAGGAGGCGCGAGCAGGCTGTGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS TCA 72 bp AGCGAGGCCGCGCGCTGGCGGGAGGAGCGGGGCGTCTaGGCGTGCACTGCCTCGTCGCGGGCTGCTCGCACA +
Preference number: 6 (lower is better)
Translates to: SEAARWREERGV*ACTASSRAART
Trigger: TGTGCGAGCAGCCCGCGACGAGGCAGTGCACGCTCAGACGCCCCGCTCCTCCCGCCAGCGCGCGGCCTCGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS GCA 72 bp GCGGGGCGTCTGAGCGTGCACTGCCTCGTCGCGGGCTaGTCGCACATCAGGCGGCCGCAGAGGCGGTGGGCG +
Preference number: 6 (lower is better)
Translates to: AGRLSVHCLVAG*SHIRRPQRRWA
Trigger: CGCCCACCGCCTCTGCGGCCGCCTGATGTGCGAGCAGCCCGCGACGAGGCAGTGCACGCTCAGACGCCCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS GCA 72 bp GCGCTGGCGGGAGGAGCGGGGCGTCTGAGCGTGCACTaGCTCGTCGCGGGCTGCTCGCACATCAGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: ALAGGAGRLSVH*LVAGCSHIRRP
Trigger: CGGCCGCCTGATGTGCGAGCAGCCCGCGACGAGGCAGTGCACGCTCAGACGCCCCGCTCCTCCCGCCAGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS CCA 72 bp TGTGTGCGCGTCGCCGACCGGGGCGAGCTCAGCCCCTaGCGCGCCGTCGTCAGCCTGCATTTCACCGGCCCC +
Preference number: 6 (lower is better)
Translates to: CVRVADRGELSP*RAVVSLHFTGP
Trigger: GGGGCCGGTGAAATGCAGGCTGACGACGGCGCGCCAGGGGCTGAGCTCGCCCCGGTCGGCGACGCGCACACA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS CCA 72 bp GCAGAGGCGGTGGGCGCTGTGCCTCTGCCCTGTTCCTaGCGCCTTTGCCCTGCTCCCGACGGAGAGGAGCGG +
Preference number: 6 (lower is better)
Translates to: AEAVGAVPLPCS*RLCPAPDGEER
Trigger: CCGCTCCTCTCCGTCGGGAGCAGGGCAAAGGCGCCAGGAACAGGGCAGAGGCACAGCGCCCACCGCCTCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS CCA 72 bp CCTCCCCTCCCAGGTGGAGCTTCAGCCTCTTTGACATaGTCTCGCCCATCTCCGCCGCGGTACGGCGCGCGG +
Preference number: 6 (lower is better)
Translates to: PPLPGGASASLT*SRPSPPRYGAR
Trigger: CCGCGCGCCGTACCGCGGCGGAGATGGGCGAGACCATGTCAAAGAGGCTGAAGCTCCACCTGGGAGGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS GCA 72 bp ACCTGTAGAGAAGAGGTCGCTGTCACTCAAGGTGTGTaGGCGTCGCCGACCGGGGCGAGCTCAGCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: TCREEVAVTQGV*ASPTGASSAPG
Trigger: GCCAGGGGCTGAGCTCGCCCCGGTCGGCGACGCGCACACACCTTGAGTGACAGCGACCTCTTCTCTACAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254770.3
CDS CCA 72 bp TCCCGTCCTGATGAAAAGGGAGGCCGGGCTCATCCGTaGTCGCCGGGGGACGAACACAGCCTGTCTCTTCGG +
Preference number: 6 (lower is better)
Translates to: SRPDEKGGRAHP*SPGDEHSLSLR
Trigger: CCGAAGAGACAGGCTGTGTTCGTCCCCCGGCGACCACGGATGAGCCCGGCCTCCCTTTTCATCAGGACGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254770.3
ENST00000452107.6
CDS CCA 72 bp CAGGGAAGTGGACCCCCAGCTGTAGGGCATTCAGCGTaGGCTCCATGGGCTACTGCACCCCCTCTTCCAGGG +
Preference number: 6 (lower is better)
Translates to: QGSGPPAVGHSA*APWATAPPLPG
Trigger: CCCTGGAAGAGGGGGTGCAGTAGCCCATGGAGCCCACGCTGAATGCCCTACAGCTGGGGGTCCACTTCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466041.1
CDS GCA 72 bp TCCAGGGGTGAGGCCCAGCAAGGCTCTGCTTGCGGCTaGCTCAGCTGTAGAGTGGGGTCTGCCTTACAGCTG +
Preference number: 6 (lower is better)
Translates to: SRGEAQQGSACG*LSCRVGSALQL
Trigger: CAGCTGTAAGGCAGACCCCACTCTACAGCTGAGGCAGCCGCAAGCAGAGCCTTGCTGGGCCTCACCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466041.1
CDS TCA 72 bp GTGGGGTCTGCCTTACAGCTGCTGGGAAGTCCGAGGTaGAAACCGAACGGCTCAACGACACTCTGTTCTCCC +
Preference number: 6 (lower is better)
Translates to: VGSALQLLGSPR*KPNGSTTLCSP
Trigger: GGGAGAACAGAGTGTCGTTGAGCCGTTCGGTTTTCACCTCGGACTTCCCAGCAGCTGTAAGGCAGACCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466041.1
CDS GCA 72 bp GCTGCCTCAGCTGTAGAGTGGGGTCTGCCTTACAGCTaGTGGGAAGTCCGAGGTGAAAACCGAACGGCTCAA +
Preference number: 6 (lower is better)
Translates to: AASAVEWGLPYS*WEVRGENRTAQ
Trigger: TTGAGCCGTTCGGTTTTCACCTCGGACTTCCCAGCAGCTGTAAGGCAGACCCCACTCTACAGCTGAGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466041.1
CDS CCA 72 bp GCCTCAGCTGTAGAGTGGGGTCTGCCTTACAGCTGCTaGGAAGTCCGAGGTGAAAACCGAACGGCTCAACGA +
Preference number: 6 (lower is better)
Translates to: ASAVEWGLPYSC*EVRGENRTAQR
Trigger: TCGTTGAGCCGTTCGGTTTTCACCTCGGACTTCCCAGCAGCTGTAAGGCAGACCCCACTCTACAGCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466041.1
CDS CCA 72 bp AATGAGAATGCAATGTCTTCACAGGCATCAGGGAAGTaGACCCCCAGCTGTAGGGCATTCAGCGTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: NENAMSSQASGK*TPSCRAFSVGS
Trigger: GGAGCCCACGCTGAATGCCCTACAGCTGGGGGTCCACTTCCCTGATGCCTGTGAAGACATTGCATTCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466041.1
CDS CAA 90 bp GCGCACATAATCAATACTGGGTTTCACCATTTCTGTCAAGGTTTCTaGGTCCACTTTTGCTGCCGGCCCTTCATCCAACAATTTGTGGCA +
Preference number: 6 (lower is better)
Translates to: AHIINTGFHHFCQGF*VHFCCRPFIQQFVA
Trigger: TGCCACAAATTGTTGGATGAAGGGCCGGCAGCAAAAGTGGACCAAGAAACCTTGACAGAAATGGTGAAACCCAGTATTGATTATGTGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476479.1
CDS CCA 72 bp TCAATACTGGGTTTCACCATTTCTGTCAAGGTTTCTTaGTCCACTTTTGCTGCCGGCCCTTCATCCAACAAT +
Preference number: 6 (lower is better)
Translates to: SILGFTISVKVS*STFAAGPSSNN
Trigger: ATTGTTGGATGAAGGGCCGGCAGCAAAAGTGGACCAAGAAACCTTGACAGAAATGGTGAAACCCAGTATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476479.1