RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for L3MBTL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000154655

Ensembl transcript IDs: ENST00000317931.12, ENST00000400104.7, ENST00000400105.6, ENST00000578677.1, ENST00000580162.1, ENST00000581231.5, ENST00000583054.5, ENST00000583809.5

Found 547 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGAAACGCCCTTCAGAGTGGGAGCAGGGAGGAGTTCTGTGCAGGTaGGCGTCTGGCCCAGCAGCCACACCAGTGTTAGGACAGGGTCCC +
Preference number: 1 (lower is better)
Translates to: LKRPSEWEQGGVLCR*ASGPAATPVLGQGP
Trigger: GGGACCCTGTCCTAACACTGGTGTGGCTGCTGGGCCAGACGCTCACCTGCACAGAACTCCTCCCTGCTCCCACTCTGAAGGGCGTTTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR TCA 90 bp GCTGAGCAGAGAGGACATGGCCTTGGCTGGGATGACCAGGGCAGCTaGCTCAGCTTCACAGGTCTCATCCTCCAGCAGGTCAGCCCCAGC +
Preference number: 1 (lower is better)
Translates to: AEQRGHGLGWDDQGS*LSFTGLILQQVSPS
Trigger: GCTGGGGCTGACCTGCTGGAGGATGAGACCTGTGAAGCTGAGTCAGCTGCCCTGGTCATCCCAGCCAAGGCCATGTCCTCTCTGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR TCA 90 bp TTATTACAGGGGTTCTGGCAGACTGCAGTGGAAATGAGTCAATTCTaGAACGCCCTTCAGAGTGGGAGCAGGGAGGAGTTCTGTGCAGGT +
Preference number: 1 (lower is better)
Translates to: LLQGFWQTAVEMSQF*NALQSGSREEFCAG
Trigger: ACCTGCACAGAACTCCTCCCTGCTCCCACTCTGAAGGGCGTTTCAGAATTGACTCATTTCCACTGCAGTCTGCCAGAACCCCTGTAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR TCA 90 bp AACACAGCTCCTTATTACAGGGGTTCTGGCAGACTGCAGTGGAAATaGGTCAATTCTGAAACGCCCTTCAGAGTGGGAGCAGGGAGGAGT +
Preference number: 1 (lower is better)
Translates to: NTAPYYRGSGRLQWK*VNSETPFRVGAGRS
Trigger: ACTCCTCCCTGCTCCCACTCTGAAGGGCGTTTCAGAATTGACTCATTTCCACTGCAGTCTGCCAGAACCCCTGTAATAAGGAGCTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR CCA 90 bp ACGGCTTCATGGGGAATGGCAGAGGAACAAGAGATGAAGGGCAAATaGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATC +
Preference number: 1 (lower is better)
Translates to: TASWGMAEEQEMKGK*KVLSHTSVCLSAVI
Trigger: GATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCATGAAGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR TCA 90 bp CCATGGGGACATTCACATCAAATTAATGTGCTCCACTTTTATTGCTaGAAGAGCGCAGGTCTTGGTGCCAGAGGAAGTTCAGGGAGCCCA +
Preference number: 1 (lower is better)
Translates to: PWGHSHQINVLHFYC*KSAGLGARGSSGSP
Trigger: TGGGCTCCCTGAACTTCCTCTGGCACCAAGACCTGCGCTCTTTCAGCAATAAAAGTGGAGCACATTAATTTGATGTGAATGTCCCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR TCA 90 bp ACATCTGTTTGTCAGGAATTTAGGCTCAGGTGGGCCGGTCAGTTCTaGTTTCAGCAGGGCTCATTCACATGTTTGTTGGACAGTTGTTGG +
Preference number: 1 (lower is better)
Translates to: TSVCQEFRLRWAGQF*FQQGSFTCLLDSCW
Trigger: CCAACAACTGTCCAACAAACATGTGAATGAGCCCTGCTGAAATCAGAACTGACCGGCCCACCTGAGCCTAAATTCCTGACAAACAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR TCA 90 bp TGGATGTGTGGGCTTCTTTGGTCTGTCTTGCAAACAAATCAGAGCTaGGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCA +
Preference number: 1 (lower is better)
Translates to: WMCGLLWSVLQTNQS*ADPTKDNNVRKPNP
Trigger: TGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAGACCAAAGAAGCCCACACATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR TCA 90 bp AGACACACAAGAGAAGTATACAGTGATTATTCCAAGGGAGGAAACTaGAGGCTGAGGATCAGGTTCAGGGAGAGATACCCCCTTATACCT +
Preference number: 1 (lower is better)
Translates to: RHTREVYSDYSKGGN*RLRIRFRERYPLIP
Trigger: AGGTATAAGGGGGTATCTCTCCCTGAACCTGATCCTCAGCCTTCAGTTTCCTCCCTTGGAATAATCACTGTATACTTCTCTTGTGTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR GCA 90 bp AGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCAGACTaGAGTGGAAATGAGTCAATTCTGAAACGCCCTTCAGAGTGGGAG +
Preference number: 1 (lower is better)
Translates to: RCNITQLLITGVLAD*SGNESILKRPSEWE
Trigger: CTCCCACTCTGAAGGGCGTTTCAGAATTGACTCATTTCCACTGCAGTCTGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR TCA 90 bp CAAGAGAAGTATACAGTGATTATTCCAAGGGAGGAAACTGAAGGCTaGGGATCAGGTTCAGGGAGAGATACCCCCTTATACCTGTTGAAT +
Preference number: 1 (lower is better)
Translates to: QEKYTVIIPREETEG*GSGSGRDTPLYLLN
Trigger: ATTCAACAGGTATAAGGGGGTATCTCTCCCTGAACCTGATCCTCAGCCTTCAGTTTCCTCCCTTGGAATAATCACTGTATACTTCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR CCA 90 bp CAAGTACAGTTTTGTTACACAGATATATTGCATAGTGATGAAGCCTaGGCTTTTAGAGTAATGGTCACCTGCATTGTGTGGTTTGTACCC +
Preference number: 1 (lower is better)
Translates to: QVQFCYTDILHSDEA*AFRVMVTCIVWFVP
Trigger: GGGTACAAACCACACAATGCAGGTGACCATTACTCTAAAAGCCCAGGCTTCATCACTATGCAATATATCTGTGTAACAAAACTGTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR GCA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTaGTCTCTGGCTGGACTGCTCCATAAAACACTTAATACATCCAAT +
Preference number: 1 (lower is better)
Translates to: SSFPLPSWSMFPFYS*SLAGLLHKTLNTSN
Trigger: ATTGGATGTATTAAGTGTTTTATGGAGCAGTCCAGCCAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR CCA 90 bp TCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTaGCTGGACTGCTCCATAAAACACTTAATACATCCAATTATTAAT +
Preference number: 1 (lower is better)
Translates to: SLYQAGPCFHFIVAL*LDCSIKHLIHPIIN
Trigger: ATTAATAATTGGATGTATTAAGTGTTTTATGGAGCAGTCCAGCCAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR CCA 90 bp AACAAACAAATTAATTCTACAATTTCATCTTTCCCTTTACCAAGCTaGTCCATGTTTCCATTTTATAGTTGCTCTCTGGCTGGACTGCTC +
Preference number: 1 (lower is better)
Translates to: NKQINSTISSFPLPS*SMFPFYSCSLAGLL
Trigger: GAGCAGTCCAGCCAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGAAATTGTAGAATTAATTTGTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR GCA 90 bp CAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGGCTGGACTaGTCCATAAAACACTTAATACATCCAATTATTAATTATAGGAAG +
Preference number: 1 (lower is better)
Translates to: QAGPCFHFIVALWLD*SIKHLIHPIINYRK
Trigger: CTTCCTATAATTAATAATTGGATGTATTAAGTGTTTTATGGAGCAGTCCAGCCAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR GCA 90 bp ACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTATTaGAGCAACAAAAACGATAAACTGCTTAGGAATAAACTTCGTAAG +
Preference number: 1 (lower is better)
Translates to: TILGGGHQGRNTSIY*SNKNDKLLRNKLRK
Trigger: CTTACGAAGTTTATTCCTAAGCAGTTTATCGTTTTTGTTGCTGCAATAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR CCA 90 bp GTAATACACAGAAATATACAATCTTTCCATACAGACAATCTTAGGTaGAGGACATCAAGGAAGAAATACGTCCATTTATTGCAGCAACAA +
Preference number: 1 (lower is better)
Translates to: VIHRNIQSFHTDNLR*RTSRKKYVHLLQQQ
Trigger: TTGTTGCTGCAATAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAAAGATTGTATATTTCTGTGTATTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR TCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCATGGCCTTGGCTGGGATaGCCAGGGCAGCTGACTCAG +
Preference number: 2 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPWPWLG*PGQLTQ
Trigger: CTGAGTCAGCTGCCCTGGTCATCCCAGCCAAGGCCA...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR GCA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGTCCAGCTTTTGGAAGTaGCCACCTGACCGTCCTCTC +
Preference number: 2 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVESSFWK*PPDRPL
Trigger: GAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGGA...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACGTGCAGGTGAGCGTCTaGCCCAGCAGCCACACCAGT +
Preference number: 2 (lower is better)
Translates to: PHPQMVSLHFWESICSCYVQVSV*PSSHTS
Trigger: ACTGGTGTGGCTGCTGGGCCAGACGCTCACCTGCAC...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCAAAGAGCGCAGGTCTTaGTGCCAGAGGAAGTTCAGG +
Preference number: 2 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLKERRS*CQRKFR
Trigger: CCTGAACTTCCTCTGGCACCAAGACCTGCGCTCTTT...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGATGTGTGGGCTTCTTTaGTCTGTCTTGCAAACAAAT +
Preference number: 2 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVEMCGLL*SVLQTN
Trigger: ATTTGTTTGCAAGACAGACCAAAGAAGCCCACACAT...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR TCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCATGGCCGTCTAACTTCTaGACATTTATAAGTTGCGAG +
Preference number: 2 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPWPSNF*TFISCE
Trigger: CTCGCAACTTATAAATGTTCAGAAGTTAGACGGCCA...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR TCA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGGGAGTTCTGTGCAGGTaGGCGTCTGGCCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKGVLCR*ASGPAA
Trigger: GGCTGCTGGGCCAGACGCTCACCTGCACAGAACTCC...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR TCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTGGAGTTCTGTGCAGGTaGGCGTCTGGCCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLGVLCR*ASGPAA
Trigger: GGCTGCTGGGCCAGACGCTCACCTGCACAGAACTCC...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCAAGCCTCTGAGTCATTaGCACTGGACCAGTCATCAA +
Preference number: 2 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLKPLSH*HWTSHQ
Trigger: TTGATGACTGGTCCAGTGCCAATGACTCAGAGGCTT...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR TCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCATTGGAAGTGCCCACCTaGCCGTCCTCTCATTACTCC +
Preference number: 2 (lower is better)
Translates to: AHSPRCNITQLLITGVLALEVPT*PSSHYS
Trigger: GGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAA...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCCTGAGTCATTGGCACTaGACCAGTCATCAAAATCCT +
Preference number: 2 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLLSHWH*TSHQNP
Trigger: AGGATTTTGATGACTGGTCCAGTGCCAATGACTCAG...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTGTGCAGGTGAGCGTCTaGCCCAGCAGCCACACCAGT +
Preference number: 2 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLVQVSV*PSSHTS
Trigger: ACTGGTGTGGCTGCTGGGCCAGACGCTCACCTGCAC...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR TCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACAGACTGCAGTGGAAATaGGTCAATTCTGAAACGCCC +
Preference number: 2 (lower is better)
Translates to: PHPQMVSLHFWESICSCYRLQWK*VNSETP
Trigger: GGGCGTTTCAGAATTGACTCATTTCCACTGCAGTCT...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR GCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCAGGCTTGAAGTTTCATTaGATTAAAAACGTCTTACGA +
Preference number: 2 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPGLKFH*IKNVLR
Trigger: TCGTAAGACGTTTTTAATGCAATGAAACTTCAAGCC...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTCCTCTCATTACTCCTaGCTACTCTCCTTTGTGGAG +
Preference number: 2 (lower is better)
Translates to: PHPQMVSLHFWESICSCYSSHYS*LLSFVE
Trigger: CTCCACAAAGGAGAGTAGCCAGGAGTAATGAGAGGA...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR TCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCAATGGGCCTAAGCCTCTaGGTCATTGGCACTGGACCA +
Preference number: 2 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPMGLSL*VIGTGP
Trigger: TGGTCCAGTGCCAATGACTCAGAGGCTTAGGCCCAT...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp GTGCCGCTCCATGTGTTAAGAACTGCTCGTCAGATTTTATTGCTAAAGGACACGGCTGGTGATGTACAGTaGCACGATCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: VPLHVLRTARQILLLKDTAGDVQ*HDLSSL
Trigger: CAGTGAGCTGAGATCGTGCCACTGTACATCACCAGC...CGTGTCCTTTAGCAATAAAATCTGACGAGCAGTTCTTAACACATGGAGCGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR TCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCACTCCACTTTTATTGCTaGAAGAGCGCAGGTCTTGGT +
Preference number: 2 (lower is better)
Translates to: AHSPRCNITQLLITGVLALHFYC*KSAGLG
Trigger: ACCAAGACCTGCGCTCTTTCAGCAATAAAAGTGGAG...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR TCA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGGCTCCATGGCAGATCTaGGCCAAGCTCGATGTTGCT +
Preference number: 2 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKAPWQI*AKLDVA
Trigger: AGCAACATCGAGCTTGGCTCAGATCTGCCATGGAGC...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR TCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCAGAAATGAGTCAATTCTaGAACGCCCTTCAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: AHSPRCNITQLLITGVLAEMSQF*NALQSG
Trigger: CCCACTCTGAAGGGCGTTTCAGAATTGACTCATTTC...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCAAAGAGCGCAGGTCTTaGTGCCAGAGGAAGTTCAGG +
Preference number: 2 (lower is better)
Translates to: LSCKQIRAERIPPKITMFKERRS*CQRKFR
Trigger: CCTGAACTTCCTCTGGCACCAAGACCTGCGCTCTTT...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAAGGTCTCTCCAGCTTTTaGAAGTGCCCACCTGACCGT +
Preference number: 2 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQGLSSF*KCPPDR
Trigger: ACGGTCAGGTGGGCACTTCCAAAAGCTGGAGAGACC...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGGTCACCTGCATTGTGTaGTTTGTACCCATTAAAAGG +
Preference number: 2 (lower is better)
Translates to: GQMESAVSHLCVPICSHLVTCIV*FVPIKR
Trigger: CCTTTTAATGGGTACAAACCACACAATGCAGGTGAC...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR TCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACCTCCACTTTTATTGCTaGAAGAGCGCAGGTCTTGGT +
Preference number: 2 (lower is better)
Translates to: IRAERIPPKITMFVNQTHLHFYC*KSAGLG
Trigger: ACCAAGACCTGCGCTCTTTCAGCAATAAAAGTGGAG...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR TCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTATGGGCCTAAGCCTCTaGGTCATTGGCACTGGACCA +
Preference number: 2 (lower is better)
Translates to: STQKSHMKSFESTRPLALMGLSL*VIGTGP
Trigger: TGGTCCAGTGCCAATGACTCAGAGGCTTAGGCCCAT...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR TCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTATGTCGCCCAGGCTGGTaGTGTACAGTGGCACGATCT +
Preference number: 2 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLCRPGW*CTVARS
Trigger: AGATCGTGCCACTGTACATCACCAGCCTGGGCGACA...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCAATAAAGGTGGATGTGTaGGCTTCTTTGGTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: AHSPRCNITQLLITGVLAIKVDV*ASLVCL
Trigger: AAGACAGACCAAAGAAGCCCACACATCCACCTTTAT...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR TCA 90 bp GTGCCGCTCCATGTGTTAAGAACTGCTCGTCAGATTTTATTGCTAAAGGACACGTCTGCAGTCATCTGGTaGCTAAAGGCAAATCAGATT +
Preference number: 2 (lower is better)
Translates to: VPLHVLRTARQILLLKDTSAVIW*LKANQI
Trigger: AATCTGATTTGCCTTTAGTCACCAGATGACTGCAGA...CGTGTCCTTTAGCAATAAAATCTGACGAGCAGTTCTTAACACATGGAGCGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR TCA 90 bp AACAACCAGGCAGCCAAATTACACCCAGAGGTTTTTCCCTTTATAAATACAATATGGACAGTTGTTGGCTaGGCAGAGAGGACATGGCCT +
Preference number: 2 (lower is better)
Translates to: NNQAAKLHPEVFPFINTIWTVVG*AERTWP
Trigger: AGGCCATGTCCTCTCTGCTCAGCCAACAACTGTCCA...TATTGTATTTATAAAGGGAAAAACCTCTGGGTGTAATTTGGCTGCCTGGTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR TCA 90 bp ACAATTTCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTGGGCCGGTCAGTTCTaGTTTCAGCAGGGCTCATTC +
Preference number: 2 (lower is better)
Translates to: TISSFPLPSWSMFPFYSCWAGQF*FQQGSF
Trigger: GAATGAGCCCTGCTGAAATCAGAACTGACCGGCCCA...GCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGAAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR TCA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGGGAAGCTGGGGTTTGTaGTCATGGAGAAAAGCCACA +
Preference number: 2 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLGSWGL*SWRKAT
Trigger: TGTGGCTTTTCTCCATGATCACAAACCCCAGCTTCC...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR GCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTGGGGTTCTGGCAGACTaGAGTGGAAATGAGTCAATT +
Preference number: 2 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLGVLAD*SGNESI
Trigger: AATTGACTCATTTCCACTGCAGTCTGCCAGAACCCC...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR GCA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACATCTCACACCTCTGTGTaGCTATCTGCAGTCATCTGG +
Preference number: 2 (lower is better)
Translates to: LFSSQADTYRRHFEASFTSHTSV*LSAVIW
Trigger: CCAGATGACTGCAGATAGGCACACAGAGGTGTGAGA...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR TCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTCAAACAAATCAGAGCTaGGCGGATCCCACCAAAGAT +
Preference number: 2 (lower is better)
Translates to: STQKSHMKSFESTRPLALQTNQS*ADPTKD
Trigger: ATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTG...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR GCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTATTCAAGCAATTCTCCTaGCTCAGCTTCCCCAGTAGG +
Preference number: 2 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLFKQFS*LSFPSR
Trigger: CCTACTGGGGAAGCTGAGGCAGGAGAATTGCTTGAA...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAAGTGTGGATACGGCCATaGGGACATTCACATCAAATT +
Preference number: 2 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQVWIRP*GHSHQI
Trigger: AATTTGATGTGAATGTCCCCATGGCCGTATCCACAC...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTGTGTGGATACGGCCATaGGGACATTCACATCAAATT +
Preference number: 2 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLVWIRP*GHSHQI
Trigger: AATTTGATGTGAATGTCCCCATGGCCGTATCCACAC...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGAGTCCAGATTCAGTGTaGATACGGCCATGGGGACAT +
Preference number: 2 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQSPDSV*IRPWGH
Trigger: ATGTCCCCATGGCCGTATCCACACTGAATCTGGACT...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR TCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTGAAATGAGTCAATTCTaGAACGCCCTTCAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: SICKDAHSPRCNITQLLIEMSQF*NALQSG
Trigger: CCCACTCTGAAGGGCGTTTCAGAATTGACTCATTTC...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR TCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTAACGAGTAAGGGTAGCTaGGGAAATGCCGAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLTSKGS*GNAEKD
Trigger: ATCCTTTTCGGCATTTCCTCAGCTACCCTTACTCGT...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR GCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTAGGTCAGTGTAATCTCTaGCTCCCAGGTTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLGQCNL*LPGSSN
Trigger: ATTGCTTGAACCTGGGAGGCAGAGATTACACTGACC...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTAAGCCTCTGAGTCATTaGCACTGGACCAGTCATCAA +
Preference number: 2 (lower is better)
Translates to: SICKDAHSPRCNITQLLIKPLSH*HWTSHQ
Trigger: TTGATGACTGGTCCAGTGCCAATGACTCAGAGGCTT...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR CAA 90 bp AAACAAAGAATAAGTACCACGCTCCCTACTTTAGAGATCTTCCCTTaGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: KQRISTTLPTLEIFP*NSVSPFVKMHTAPD
Trigger: ATCTGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTCTAAAGTAGGGAGCGTGGTACTTATTCTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR TCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAACCATTCTTTGCCTCTTaGGAAATTCAGGGACCATCA +
Preference number: 2 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKPFFAS*EIQGPS
Trigger: TGATGGTCCCTGAATTTCTCAAGAGGCAAAGAATGG...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR TCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTACCCCCTTATACCTGTTaGATTTTGCACCAAATGCAC +
Preference number: 2 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLPPYTC*ILHQMH
Trigger: GTGCATTTGGTGCAAAATTCAACAGGTATAAGGGGG...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR GCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAATTCTTTGGTCTGTCTTaGAAACAAATCAGAGCTGAG +
Preference number: 2 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQFFGLS*KQIRAE
Trigger: CTCAGCTCTGATTTGTTTGCAAGACAGACCAAAGAA...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR GCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTAAGAGTAATGGTCACCTaGATTGTGTGGTTTGTACCC +
Preference number: 2 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLRVMVT*IVWFVP
Trigger: GGGTACAAACCACACAATGCAGGTGACCATTACTCT...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR GCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTACTCTGTGTGCCTATCTaGAGTCATCTGGTGACTAAA +
Preference number: 2 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLLCVPI*SHLVTK
Trigger: TTTAGTCACCAGATGACTGCAGATAGGCACACAGAG...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTCTGAGTCATTGGCACTaGACCAGTCATCAAAATCCT +
Preference number: 2 (lower is better)
Translates to: SICKDAHSPRCNITQLLILSHWH*TSHQNP
Trigger: AGGATTTTGATGACTGGTCCAGTGCCAATGACTCAG...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTATGTGTGGGCTTCTTTaGTCTGTCTTGCAAACAAAT +
Preference number: 2 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLMCGLL*SVLQTN
Trigger: ATTTGTTTGCAAGACAGACCAAAGAAGCCCACACAT...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR GCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTAAGAATGTATATGAGGTaGTACTTCTTTGTGGCCGTC +
Preference number: 2 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLRMYMR*YFFVAV
Trigger: GACGGCCACAAAGAAGTAGCACCTCATATACATTCT...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR GCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTATTTCCATTTTATAGTTaGTCTCTGGCTGGACTGCTC +
Preference number: 2 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLFPFYS*SLAGLL
Trigger: GAGCAGTCCAGCCAGAGAGCAACTATAAAATGGAAA...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CCA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGATAAAGGTGGATGTGTaGGCTTCTTTGGTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQIKVDV*ASLVCL
Trigger: AAGACAGACCAAAGAAGCCCACACATCCACCTTTAT...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAACATAGTGATGAAGCCTaGGCTTTTAGAGTAATGGTC +
Preference number: 2 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKHSDEA*AFRVMV
Trigger: GACCATTACTCTAAAAGCCCAGGCTTCATCACTATG...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CCA 90 bp ACAATTTCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCGTGTTCCTGGGCATTTaGGTTATAGGTTTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: TISSFPLPSWSMFPFYSCVFLGI*VIGFLV
Trigger: AACCAGAAAACCTATAACCCAAATGCCCAGGAACAC...GCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGAAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR GCA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGTTCTTTGGTCTGTCTTaGAAACAAATCAGAGCTGAG +
Preference number: 2 (lower is better)
Translates to: EHCFSNISPLESVMLVRWFFGLS*KQIRAE
Trigger: CTCAGCTCTGATTTGTTTGCAAGACAGACCAAAGAA...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR GCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAATGCAGAGAAGATAAATaGCTTCCTTCACCTTATTGT +
Preference number: 2 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKCREDK*LPSPYC
Trigger: ACAATAAGGTGAAGGAAGGCATTTATCTTCTCTGCA...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR GCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTATATAGGTTTTCTGGTTaGAGAGAAGATAAATGCCTT +
Preference number: 2 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLYRFSG*REDKCL
Trigger: AAGGCATTTATCTTCTCTGCAACCAGAAAACCTATA...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR TCA 72 bp ACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTaGTGGTGGAGGGTCCTCAGAAGGGTCTCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: TPVLGQGPLRPR*WWRVLRRVSPA
Trigger: AGCTGGAGAGACCCTTCTGAGGACCCTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR GCA 72 bp GAGGGTCCTCAGAAGGGTCTCTCCAGCTTTTGGAAGTaGCCACCTGACCGTCCTCTCATTACTCCTGGCTAC +
Preference number: 3 (lower is better)
Translates to: EGPQKGLSSFWK*PPDRPLITPGY
Trigger: GTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGGAGAGACCCTTCTGAGGACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR CCA 72 bp CTCATCCTCCAGCAGGTCAGCCCCAGCACGGCTTCATaGGGAATGGCAGAGGAACAAGAGATGAAGGGCAAA +
Preference number: 3 (lower is better)
Translates to: LILQQVSPSTAS*GMAEEQEMKGK
Trigger: TTTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCATGAAGCCGTGCTGGGGCTGACCTGCTGGAGGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CAA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCGAAAGAGCGCAGGTCTaGGTGCCAGAGGAAGTTCAG +
Preference number: 3 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLERAQV*VPEEVQ
Trigger: CTGAACTTCCTCTGGCACCAAGACCTGCGCTCTTTC...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR CCA 72 bp ATGGTGGAGGGTCCTCAGAAGGGTCTCTCCAGCTTTTaGAAGTGCCCACCTGACCGTCCTCTCATTACTCCT +
Preference number: 3 (lower is better)
Translates to: MVEGPQKGLSSF*KCPPDRPLITP
Trigger: AGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGGAGAGACCCTTCTGAGGACCCTCCACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR TCA 72 bp GGGTTCTGGCAGACTGCAGTGGAAATGAGTCAATTCTaGAACGCCCTTCAGAGTGGGAGCAGGGAGGAGTTC +
Preference number: 3 (lower is better)
Translates to: GFWQTAVEMSQF*NALQSGSREEF
Trigger: GAACTCCTCCCTGCTCCCACTCTGAAGGGCGTTTCAGAATTGACTCATTTCCACTGCAGTCTGCCAGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR TCA 72 bp GTTCGTAAACCAAACCCACAGATGGGCCTAAGCCTCTaGGTCATTGGCACTGGACCAGTCATCAAAATCCTC +
Preference number: 3 (lower is better)
Translates to: VRKPNPQMGLSL*VIGTGPVIKIL
Trigger: GAGGATTTTGATGACTGGTCCAGTGCCAATGACTCAGAGGCTTAGGCCCATCTGTGGGTTTGGTTTACGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR TCA 72 bp TGTCAGGAATTTAGGCTCAGGTGGGCCGGTCAGTTCTaGTTTCAGCAGGGCTCATTCACATGTTTGTTGGAC +
Preference number: 3 (lower is better)
Translates to: CQEFRLRWAGQF*FQQGSFTCLLD
Trigger: GTCCAACAAACATGTGAATGAGCCCTGCTGAAATCAGAACTGACCGGCCCACCTGAGCCTAAATTCCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR CCA 72 bp TGGGGAATGGCAGAGGAACAAGAGATGAAGGGCAAATaGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCT +
Preference number: 3 (lower is better)
Translates to: WGMAEEQEMKGK*KVLSHTSVCLS
Trigger: AGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CAA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCAAGGCTCCAGGAAAGCTaGGGAGCACAACCAAGAAAT +
Preference number: 3 (lower is better)
Translates to: AHSPRCNITQLLITGVLARLQES*GAQPRN
Trigger: ATTTCTTGGTTGTGCTCCCAAGCTTTCCTGGAGCCT...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR CCA 72 bp ACCAAACCCACAGATGGGCCTAAGCCTCTGAGTCATTaGCACTGGACCAGTCATCAAAATCCTCTAAACATG +
Preference number: 3 (lower is better)
Translates to: TKPTDGPKPLSH*HWTSHQNPLNM
Trigger: CATGTTTAGAGGATTTTGATGACTGGTCCAGTGCCAATGACTCAGAGGCTTAGGCCCATCTGTGGGTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CAA 90 bp ACAATTTCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCAGAGAGGACATGGCCTaGGCTGGGATGACCAGGGCA +
Preference number: 3 (lower is better)
Translates to: TISSFPLPSWSMFPFYSCREDMA*AGMTRA
Trigger: TGCCCTGGTCATCCCAGCCAAGGCCATGTCCTCTCT...GCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGAAATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR TCA 72 bp TATACAGTGATTATTCCAAGGGAGGAAACTGAAGGCTaGGGATCAGGTTCAGGGAGAGATACCCCCTTATAC +
Preference number: 3 (lower is better)
Translates to: YTVIIPREETEG*GSGSGRDTPLY
Trigger: GTATAAGGGGGTATCTCTCCCTGAACCTGATCCTCAGCCTTCAGTTTCCTCCCTTGGAATAATCACTGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR GCA 72 bp ATAACACAGCTCCTTATTACAGGGGTTCTGGCAGACTaGAGTGGAAATGAGTCAATTCTGAAACGCCCTTCA +
Preference number: 3 (lower is better)
Translates to: ITQLLITGVLAD*SGNESILKRPS
Trigger: TGAAGGGCGTTTCAGAATTGACTCATTTCCACTGCAGTCTGCCAGAACCCCTGTAATAAGGAGCTGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR GCA 72 bp ATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTaGAGTCATCTGGTGACTAAAGGCAAATCAGATTCA +
Preference number: 3 (lower is better)
Translates to: MESAVSHLCVPI*SHLVTKGKSDS
Trigger: TGAATCTGATTTGCCTTTAGTCACCAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CAA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGGAAAGAGCGCAGGTCTaGGTGCCAGAGGAAGTTCAG +
Preference number: 3 (lower is better)
Translates to: EHCFSNISPLESVMLVRWERAQV*VPEEVQ
Trigger: CTGAACTTCCTCTGGCACCAAGACCTGCGCTCTTTC...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CAA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCTGTGCTCCACTTTTATaGCTGAAAGAGCGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFCAPLL*LKERRS
Trigger: AGACCTGCGCTCTTTCAGCAATAAAAGTGGAGCACA...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR TCA 72 bp GGGCTTCTTTGGTCTGTCTTGCAAACAAATCAGAGCTaGGCGGATCCCACCAAAGATAACAATGTTCGTAAA +
Preference number: 3 (lower is better)
Translates to: GLLWSVLQTNQS*ADPTKDNNVRK
Trigger: TTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAGACCAAAGAAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR GCA 72 bp CTGTGCTCCATGGCAGATCTGAGCCAAGCTCGATGTTaGTCTGGTAAAAACATTAACGATGTATTCATGAAC +
Preference number: 3 (lower is better)
Translates to: LCSMADLSQARC*SGKNINDVFMN
Trigger: GTTCATGAATACATCGTTAATGTTTTTACCAGAGCAACATCGAGCTTGGCTCAGATCTGCCATGGAGCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CAA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTTGTGCTCCACTTTTATaGCTGAAAGAGCGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: STQKSHMKSFESTRPLALCAPLL*LKERRS
Trigger: AGACCTGCGCTCTTTCAGCAATAAAAGTGGAGCACA...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CAA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTAGGCTCCAGGAAAGCTaGGGAGCACAACCAAGAAAT +
Preference number: 3 (lower is better)
Translates to: SICKDAHSPRCNITQLLIRLQES*GAQPRN
Trigger: ATTTCTTGGTTGTGCTCCCAAGCTTTCCTGGAGCCT...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CAA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTGATGTGTGGGCTTCTTaGGTCTGTCTTGCAAACAAA +
Preference number: 3 (lower is better)
Translates to: STQKSHMKSFESTRPLALDVWAS*VCLANK
Trigger: TTTGTTTGCAAGACAGACCAAAGAAGCCCACACATC...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR-3UTR CAA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGTCATTCACATGTTTGTaGGACAGTTGTTGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLSFTCL*DSCWLS
Trigger: GCTCAGCCAACAACTGTCCAACAAACATGTGAATGA...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CAA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTAAGGTGGGACCATTCTTaGCCTCTTGAGAAATTCAGG +
Preference number: 3 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLRWDHS*PLEKFR
Trigger: CCTGAATTTCTCAAGAGGCAAAGAATGGTCCCACCT...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR TCA 72 bp CTGATATATCTTCTGCTAATAAGCACAGCAGAATGGTaGACAGTGTTCTTGTGTTCCTGGGCATTTGGGTTA +
Preference number: 3 (lower is better)
Translates to: LIYLLLISTAEW*TVFLCSWAFGL
Trigger: TAACCCAAATGCCCAGGAACACAAGAACACTGTTCACCATTCTGCTGTGCTTATTAGCAGAAGATATATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR GCA 72 bp AGTGATGAAGCCTGGGCTTTTAGAGTAATGGTCACCTaGATTGTGTGGTTTGTACCCATTAAAAGGAATTTC +
Preference number: 3 (lower is better)
Translates to: SDEAWAFRVMVT*IVWFVPIKRNF
Trigger: GAAATTCCTTTTAATGGGTACAAACCACACAATGCAGGTGACCATTACTCTAAAAGCCCAGGCTTCATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR GCA 72 bp CCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTaGTCTCTGGCTGGACTGCTCCATAAAACACTTAAT +
Preference number: 3 (lower is better)
Translates to: PLPSWSMFPFYS*SLAGLLHKTLN
Trigger: ATTAAGTGTTTTATGGAGCAGTCCAGCCAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR CCA 72 bp CAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTaGCTGGACTGCTCCATAAAACACTTAATACATCCA +
Preference number: 3 (lower is better)
Translates to: QAGPCFHFIVAL*LDCSIKHLIHP
Trigger: TGGATGTATTAAGTGTTTTATGGAGCAGTCCAGCCAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CAA 90 bp ACAATTTCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCGGCTCATTCACATGTTaGTTGGACAGTTGTTGGCTG +
Preference number: 3 (lower is better)
Translates to: TISSFPLPSWSMFPFYSCGSFTC*LDSCWL
Trigger: CAGCCAACAACTGTCCAACAAACATGTGAATGAGCC...GCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGAAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CAA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACACCTGCATTGTGTGGTTaGTACCCATTAAAAGGAATT +
Preference number: 3 (lower is better)
Translates to: LFSSQADTYRRHFEASFTPALCG*YPLKGI
Trigger: AATTCCTTTTAATGGGTACAAACCACACAATGCAGG...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CAA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACAGTGGTATGCCATCACTaGTGTAAATACACATACACA +
Preference number: 3 (lower is better)
Translates to: LFSSQADTYRRHFEASFTVVCHH*CKYTYT
Trigger: TGTGTATGTGTATTTACACAAGTGATGGCATACCAC...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR TCA 72 bp GATCAGGTTCAGGGAGAGATACCCCCTTATACCTGTTaGATTTTGCACCAAATGCACAAATCAATAATATGC +
Preference number: 3 (lower is better)
Translates to: DQVQGEIPPYTC*ILHQMHKSIIC
Trigger: GCATATTATTGATTTGTGCATTTGGTGCAAAATTCAACAGGTATAAGGGGGTATCTCTCCCTGAACCTGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR CCA 72 bp ACTTTAAAAAGTCCAGATTCAGTGTGGATACGGCCATaGGGACATTCACATCAAATTAATGTGCTCCACTTT +
Preference number: 3 (lower is better)
Translates to: TLKSPDSVWIRP*GHSHQINVLHF
Trigger: AAAGTGGAGCACATTAATTTGATGTGAATGTCCCCATGGCCGTATCCACACTGAATCTGGACTTTTTAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR CCA 72 bp TTTTGTTACACAGATATATTGCATAGTGATGAAGCCTaGGCTTTTAGAGTAATGGTCACCTGCATTGTGTGG +
Preference number: 3 (lower is better)
Translates to: FCYTDILHSDEA*AFRVMVTCIVW
Trigger: CCACACAATGCAGGTGACCATTACTCTAAAAGCCCAGGCTTCATCACTATGCAATATATCTGTGTAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CAA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAATGTTACACAGATATATaGCATAGTGATGAAGCCTGG +
Preference number: 3 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKCYTDI*HSDEAW
Trigger: CCAGGCTTCATCACTATGCAATATATCTGTGTAACA...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR-3UTR CAA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACAGGCACAAGTACAGTTTaGTTACACAGATATATTGCA +
Preference number: 3 (lower is better)
Translates to: LFSSQADTYRRHFEASFTGTSTV*LHRYIA
Trigger: TGCAATATATCTGTGTAACAAAACTGTACTTGTGCC...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR CCA 72 bp CAAATCACAGACACTTTAAAAAGTCCAGATTCAGTGTaGATACGGCCATGGGGACATTCACATCAAATTAAT +
Preference number: 3 (lower is better)
Translates to: QITDTLKSPDSV*IRPWGHSHQIN
Trigger: ATTAATTTGATGTGAATGTCCCCATGGCCGTATCCACACTGAATCTGGACTTTTTAAAGTGTCTGTGATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
3UTR GCA 72 bp ATACGTCCATTTATTGCAGCAACAAAAACGATAAACTaGTTAGGAATAAACTTCGTAAGAAGGACGCAAGTT +
Preference number: 3 (lower is better)
Translates to: IRPFIAATKTIN*LGINFVRRTQV
Trigger: AACTTGCGTCCTTCTTACGAAGTTTATTCCTAAGCAGTTTATCGTTTTTGTTGCTGCAATAAATGGACGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR GCA 72 bp CCATGTTTCCATTTTATAGTTGCTCTCTGGCTGGACTaGTCCATAAAACACTTAATACATCCAATTATTAAT +
Preference number: 3 (lower is better)
Translates to: PCFHFIVALWLD*SIKHLIHPIIN
Trigger: ATTAATAATTGGATGTATTAAGTGTTTTATGGAGCAGTCCAGCCAGAGAGCAACTATAAAATGGAAACATGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR CCA 72 bp AGAAATATACAATCTTTCCATACAGACAATCTTAGGTaGAGGACATCAAGGAAGAAATACGTCCATTTATTG +
Preference number: 3 (lower is better)
Translates to: RNIQSFHTDNLR*RTSRKKYVHLL
Trigger: CAATAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAAAGATTGTATATTTCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGGTCCAACGTGCCACTTaGCTGGCCCGGATGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVEVQRAT*LARMSA
Trigger: GGCTGACATCCGGGCCAGCCAAGTGGCACGTTGGAC...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGCCAGTGGATGCCCTGTaGCATCACACCATCCGATCG +
Preference number: 4 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVEPVDAL*HHTIRS
Trigger: CGATCGGATGGTGTGATGTCACAGGGCATCCACTGG...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGGGTGGGCTGACACCGTaGACATGGACACTGACTGGT +
Preference number: 4 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVEGGLTP*TWTLTG
Trigger: ACCAGTCAGTGTCCATGTCCACGGTGTCAGCCCACC...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGGTCATTCGTTCGCTGTaGCACTTCCAGTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVEVIRSL*HFQWMP
Trigger: GGGCATCCACTGGAAGTGCCACAGCGAACGAATGAC...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCACGTGGACCACGGATATaGCCTATTCCTCGGCACCCG +
Preference number: 4 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPRGPRI*PIPRHP
Trigger: CGGGTGCCGAGGAATAGGCCATATCCGTGGTCCACG...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGAAACGCCCTTCAGAGTaGGAGCAGGGAGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVEKRPSE*EQGGVL
Trigger: CAGAACTCCTCCCTGCTCCCACTCTGAAGGGCGTTT...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGCTGACACCGTGGACATaGACACTGACTGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVELTPWT*TLTGEA
Trigger: TGCTTCACCAGTCAGTGTCCATGTCCACGGTGTCAG...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGAGTCCAGATTCAGTGTaGATACGGCCATGGGGACAT +
Preference number: 4 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVESPDSV*IRPWGH
Trigger: ATGTCCCCATGGCCGTATCCACACTGAATCTGGACT...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCTCCCTGTGCAGCCGCTaGAGGGACGTGACTCAAAGG +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLSLCSR*RDVTQR
Trigger: CCTTTGAGTCACGTCCCTTCAGCGGCTGCACAGGGA...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCAGTAGGACAGACAGCTTaGCCTGGAAGGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPVGQTA*PGRIFR
Trigger: CCTGAAGATCCTTCCAGGTCAAGCTGTCTGTCCTAC...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCATGGCCAGGATGGTCTTaGTCTCCTGATCTCGTGATC +
Preference number: 4 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPWPGWS*SPDLVI
Trigger: GATCACGAGATCAGGAGATCAAGACCATCCTGGCCA...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGGTGTCCCTCCACTTCTaGGAGAGTATTTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVEVSLHF*ESICSC
Trigger: ACAGCTACAAATACTCTCCCAGAAGTGGAGGGACAC...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CAGCCCCAGCACGGCTTCATGGGGAATGGCAGAGGAACAAGAGATGAAGGGCAAGTCATTCGTTCGCTGTaGCACTTCCAGTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: QPQHGFMGNGRGTRDEGQVIRSL*HFQWMP
Trigger: GGGCATCCACTGGAAGTGCCACAGCGAACGAATGAC...TTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCATGAAGCCGTGCTGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCAGGTCCCGAAAAGGGTaGGCTGACACCGTGGACATG +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLRSRKG*ADTVDM
Trigger: CATGTCCACGGTGTCAGCCCACCCTTTTCGGGACCT...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTCCCTGTGCAGCCGCTaGAGGGACGTGACTCAAAGG +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYSLCSR*RDVTQR
Trigger: CCTTTGAGTCACGTCCCTTCAGCGGCTGCACAGGGA...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCGCTCCATGGCAGATCTaGGCCAAGCTCGATGTTGCT +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLAPWQI*AKLDVA
Trigger: AGCAACATCGAGCTTGGCTCAGATCTGCCATGGAGC...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CAGCCCCAGCACGGCTTCATGGGGAATGGCAGAGGAACAAGAGATGAAGGGCAAACCCAGCTCTTGTCCTaGTTTATGCTCCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QPQHGFMGNGRGTRDEGQTQLLS*FMLLSL
Trigger: GAGGGAGAGGAGCATAAATCAGGACAAGAGCTGGGT...TTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCATGAAGCCGTGCTGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCACTGACACCAACCAACTaGCTGGACATAAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPLTPTN*LDIRAI
Trigger: AATAGCCCTTATGTCCAGCCAGTTGGTTGGTGTCAG...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGCAACACGAATTAACCTaGGGTTCCGTTTATCCACAA +
Preference number: 4 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVEQHELT*GSVYPQ
Trigger: TTGTGGATAAACGGAACCCCAGGTTAATTCGTGTTG...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGGTAAATCTTCAGTGCTaGGCCCAGTTTGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVEVNLQC*AQFDLH
Trigger: ATGAAGATCAAACTGGGCCCAGCACTGAAGATTTAC...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCAAACGCCCTTCAGAGTaGGAGCAGGGAGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLKRPSE*EQGGVL
Trigger: CAGAACTCCTCCCTGCTCCCACTCTGAAGGGCGTTT...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCCCCCTGAGGCCCCGCTaGTGGTGGAGGGTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFPLRPR*WWRVLR
Trigger: TCTGAGGACCCTCCACCATCAGCGGGGCCTCAGGGG...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCACCATTCTTTGCCTCTTaGGAAATTCAGGGACCATCA +
Preference number: 4 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPPFFAS*EIQGPS
Trigger: TGATGGTCCCTGAATTTCTCAAGAGGCAAAGAATGG...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCACCCCCTTATACCTGTTaGATTTTGCACCAAATGCAC +
Preference number: 4 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPPPYTC*ILHQMH
Trigger: GTGCATTTGGTGCAAAATTCAACAGGTATAAGGGGG...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCACTACAGAAGACACTTTaGAGCCTCCTTTACACAGCA +
Preference number: 4 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPLQKTL*SLLYTA
Trigger: TGCTGTGTAAAGGAGGCTTCAAAGTGTCTTCTGTAG...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp CAGCCCCAGCACGGCTTCATGGGGAATGGCAGAGGAACAAGAGATGAAGGGCAAGATATCAGGGCTGTCTaGCTCCACCCAGTAGTCATA +
Preference number: 4 (lower is better)
Translates to: QPQHGFMGNGRGTRDEGQDIRAV*LHPVVI
Trigger: TATGACTACTGGGTGGAGGCAGACAGCCCTGATATC...TTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCATGAAGCCGTGCTGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCGGCACTTCCAGTGGATaGCCTGTGACATCACACCAT +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLGTSSG*PVTSHH
Trigger: ATGGTGTGATGTCACAGGGCATCCACTGGAAGTGCC...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCACAGGGGAACCAGCATTaGTCCAAAAATCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPQGNQH*SKNHSN
Trigger: GTTGCTATGATTTTTGGACCAATGCTGGTTCCCCTG...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACAGGTCCCGAAAAGGGTaGGCTGACACCGTGGACATG +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYRSRKG*ADTVDM
Trigger: CATGTCCACGGTGTCAGCCCACCCTTTTCGGGACCT...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCGATGTCAGCCACGCCTaGAAGCAACTTGCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLDVSHA*KQLAVL
Trigger: CAACACTGCAAGTTGCTTCCAGGCGTGGCTGACATC...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCAGTCCAACGTGCCACTTaGCTGGCCCGGATGTCAGCC +
Preference number: 4 (lower is better)
Translates to: AHSPRCNITQLLITGVLAVQRAT*LARMSA
Trigger: GGCTGACATCCGGGCCAGCCAAGTGGCACGTTGGAC...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACAGCCCATTCATCCCCTaGCTTCTTGGCCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYSPFIP*LLGLRQ
Trigger: TTGCCTCAGGCCAAGAAGTCAGGGGATGAATGGGCT...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCAGCAAGAGAATGTATATaGGGTGCTACTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPARECI*GATSLW
Trigger: CCACAAAGAAGTAGCACCTCATATACATTCTCTTGC...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCAAGAATGTATATGAGGTaGTACTTCTTTGTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPRMYMR*YFFVAV
Trigger: GACGGCCACAAAGAAGTAGCACCTCATATACATTCT...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCAACCATTTTCATGCTCTaGAAAGGACTGATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPTIFML*KGLILG
Trigger: TCCAAGGATCAGTCCTTTCCAGAGCATGAAAATGGT...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCCACACAGAATACCGATaGATGTCGGGGATCAATGCC +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLHTEYR*MSGINA
Trigger: GGCATTGATCCCCGACATCCATCGGTATTCTGTGTG...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACAACGTGCCACTTGGCTaGCCCGGATGTCAGCCACGC +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHNVPLG*PGCQPR
Trigger: GCGTGGCTGACATCCGGGCCAGCCAAGTGGCACGTT...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCTCTTCAGGGAGTTCCTaGGAATGCCTGAACATCAGG +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLSSGSS*ECLNIR
Trigger: CCTGATGTTCAGGCATTCCCAGGAACTCCCTGAAGA...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GTGCCGCTCCATGTGTTAAGAACTGCTCGTCAGATTTTATTGCTAAAGGACACGTCCCTGTGCAGCCGCTaGAGGGACGTGACTCAAAGG +
Preference number: 4 (lower is better)
Translates to: VPLHVLRTARQILLLKDTSLCSR*RDVTQR
Trigger: CCTTTGAGTCACGTCCCTTCAGCGGCTGCACAGGGA...CGTGTCCTTTAGCAATAAAATCTGACGAGCAGTTCTTAACACATGGAGCGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGCACCATCCTACTGGATaGATGTCAGGGGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: GQMESAVSHLCVPICSHLHHPTG*MSGEPA
Trigger: TGCTGGTTCCCCTGACATTCATCCAGTAGGATGGTG...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACCACCATCCTACTGGATaGATGTCAGGGGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYHHPTG*MSGEPA
Trigger: TGCTGGTTCCCCTGACATTCATCCAGTAGGATGGTG...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCATCCCAACCATCAAAATaGACCTTTACTCTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPSQPSK*TFTLWS
Trigger: TGACCAAAGAGTAAAGGTTCATTTTGATGGTTGGGA...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp CAGCCCCAGCACGGCTTCATGGGGAATGGCAGAGGAACAAGAGATGAAGGGCAATCTCTCAAACGATCGTaGAGTGTTGCCTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QPQHGFMGNGRGTRDEGQSLKRS*SVASFF
Trigger: GAAAAAGGAGGCAACACTTCACGATCGTTTGAGAGA...TTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCATGAAGCCGTGCTGGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCCAAACAAATCAGAGCTaGGCGGATCCCACCAAAGAT +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLQTNQS*ADPTKD
Trigger: ATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTG...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAAGGAGTTCTGTGCAGGTaGGCGTCTGGCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQGVLCR*ASGPAA
Trigger: GGCTGCTGGGCCAGACGCTCACCTGCACAGAACTCC...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp CAGCCCCAGCACGGCTTCATGGGGAATGGCAGAGGAACAAGAGATGAAGGGCAAGACTCAAAGGGGTTGTaGTATCCTTGGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QPQHGFMGNGRGTRDEGQDSKGL*YPWASF
Trigger: AAAAGAAGCCCAAGGATAGCACAACCCCTTTGAGTC...TTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCATGAAGCCGTGCTGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp CAGCCCCAGCACGGCTTCATGGGGAATGGCAGAGGAACAAGAGATGAAGGGCAAGGGATAACCTTGGGGTaGTATCAGAGTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: QPQHGFMGNGRGTRDEGQGITLG*YQSSSI
Trigger: AATGGAAGAACTCTGATAGCACCCCAAGGTTATCCC...TTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCATGAAGCCGTGCTGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACTGCAGTGTTGCTCCCTaGCGAGGGGAAGGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHCSVAP*RGEGPE
Trigger: TTCGGGACCTTCCCCTCGGCAGGGAGCAACACTGCA...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCAATCCACAGTCCAACGTaGCACTTGGCTGGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: AHSPRCNITQLLITGVLAIHSPT*HLAGPD
Trigger: ATCCGGGCCAGCCAAGTGGCACGTTGGACTGTGGAT...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCAAACGTGCCACTTGGCTaGCCCGGATGTCAGCCACGC +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPNVPLG*PGCQPR
Trigger: GCGTGGCTGACATCCGGGCCAGCCAAGTGGCACGTT...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACAAAGAGCGCAGGTCTTaGTGCCAGAGGAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYKERRS*CQRKFR
Trigger: CCTGAACTTCCTCTGGCACCAAGACCTGCGCTCTTT...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCTCCTCTCATTACTCCTaGCTACTCTCCTTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLSSHYS*LLSFVE
Trigger: CTCCACAAAGGAGAGTAGCCAGGAGTAATGAGAGGA...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCACTCCCCACCCACAAATaGTGTCCCTCCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: AHSPRCNITQLLITGVLALPTHK*CPSTSG
Trigger: CCCAGAAGTGGAGGGACACCATTTGTGGGTGGGGAG...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCTTTCAAGTTCATGTCTaGATACGGGCAGCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLFQVHV*IRAAKS
Trigger: GCTTTTGGCTGCCCGTATTCAGACATGAACTTGAAA...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCAATGGACACTGACTGGTaGAGCACCTGCTGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPMDTDW*STCCAC
Trigger: GCAGGCGCAGCAGGTGCTTCACCAGTCAGTGTCCAT...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGCCCCTGAGGCCCCGCTaGTGGTGGAGGGTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQPLRPR*WWRVLR
Trigger: TCTGAGGACCCTCCACCATCAGCGGGGCCTCAGGGG...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTGGAGTTCTGTGCAGGTaGGCGTCTGGCCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: STQKSHMKSFESTRPLALGVLCR*ASGPAA
Trigger: GGCTGCTGGGCCAGACGCTCACCTGCACAGAACTCC...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GTGCCGCTCCATGTGTTAAGAACTGCTCGTCAGATTTTATTGCTAAAGGACACGTGTCGCCCAGGCTGGTaGTGTACAGTGGCACGATCT +
Preference number: 4 (lower is better)
Translates to: VPLHVLRTARQILLLKDTCRPGW*CTVARS
Trigger: AGATCGTGCCACTGTACATCACCAGCCTGGGCGACA...CGTGTCCTTTAGCAATAAAATCTGACGAGCAGTTCTTAACACATGGAGCGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACGATATCAGGGCTGTCTaGCTCCACCCAGTAGTCATA +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYDIRAV*LHPVVI
Trigger: TATGACTACTGGGTGGAGGCAGACAGCCCTGATATC...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACATCCACAGTCCAACGTaGCACTTGGCTGGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHIHSPT*HLAGPD
Trigger: ATCCGGGCCAGCCAAGTGGCACGTTGGACTGTGGAT...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp CAGCCCCAGCACGGCTTCATGGGGAATGGCAGAGGAACAAGAGATGAAGGGCAATTTCCATTTTATAGTTaGTCTCTGGCTGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: QPQHGFMGNGRGTRDEGQFPFYS*SLAGLL
Trigger: GAGCAGTCCAGCCAGAGAGCAACTATAAAATGGAAA...TTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCATGAAGCCGTGCTGGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACCGCACTCCTTGGCAGTaGTTTTATGGTCTGACACGT +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYRTPWQ*FYGLTR
Trigger: ACGTGTCAGACCATAAAACCACTGCCAAGGAGTGCG...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACCACACAGAATACCGATaGATGTCGGGGATCAATGCC +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYHTEYR*MSGINA
Trigger: GGCATTGATCCCCGACATCCATCGGTATTCTGTGTG...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp GTGCCGCTCCATGTGTTAAGAACTGCTCGTCAGATTTTATTGCTAAAGGACACGCACCATCCGATCGGGTaGATATCAGGGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VPLHVLRTARQILLLKDTHHPIG*ISGLSA
Trigger: GGCAGACAGCCCTGATATCCACCCGATCGGATGGTG...CGTGTCCTTTAGCAATAAAATCTGACGAGCAGTTCTTAACACATGGAGCGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCACAGACAGCTTGACCTaGAAGGATCTTCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLTDSLT*KDLQVI
Trigger: AATGACCTGAAGATCCTTCCAGGTCAAGCTGTCTGT...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAACCGAAAAGGGTGGGCTaGCACCGTGGACATGGACAC +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQPKRVG*HRGHGH
Trigger: GTGTCCATGTCCACGGTGTCAGCCCACCCTTTTCGG...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTTGGGCTGTTTCATTaGCACCCCCGCACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFVGLFH*HPRTPW
Trigger: CCAAGGAGTGCGGGGGTGGCAATGAAACAGCCCAAC...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCAGCACCTGCTGCGCCTaGTCCACCGAGTATTCTCTG +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFSTCCA*STEYSL
Trigger: CAGAGAATACTCGGTGGAGCAGGCGCAGCAGGTGCT...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317931.12
CDS-3UTR GCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCACGCCTGGAAGCAACTTaGAGTGTTGCTCCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPRLEAT*SVAPCR
Trigger: TCGGCAGGGAGCAACACTGCAAGTTGCTTCCAGGCG...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACAGCACCTGCTGCGCCTaGTCCACCGAGTATTCCAAA +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHSTCCA*STEYSK
Trigger: TTTGGAATACTCGGTGGAGCAGGCGCAGCAGGTGCT...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400105.6
CDS-3UTR CCA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGCAACAATATCTGCTATaGTCGCCACACACACCAAGG +
Preference number: 4 (lower is better)
Translates to: GQMESAVSHLCVPICSHLQQYLL*SPHTPR
Trigger: CCTTGGTGTGTGTGGCGACCATAGCAGATATTGTTG...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACCAACAATATCTGCTATaGTCGCCACACACACCAAGG +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYQQYLL*SPHTPR
Trigger: CCTTGGTGTGTGTGGCGACCATAGCAGATATTGTTG...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACCTGACACCAACCAACTaGCTGGACATAAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYLTPTN*LDIRAI
Trigger: AATAGCCCTTATGTCCAGCCAGTTGGTTGGTGTCAG...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCCCAGGAAAAATTTTCTaGATTGGGATAACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLPGKIF*IGITLG
Trigger: CCCCAAGGTTATCCCAATCCAGAAAATTTTTCCTGG...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAACGTGGACCACGGATATaGCCTATTCCTCGGCACCCG +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQRGPRI*PIPRHP
Trigger: CGGGTGCCGAGGAATAGGCCATATCCGTGGTCCACG...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCCGTGGACCACGGATATaGCCTATTCCTCGGCACCCG +
Preference number: 4 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFRGPRI*PIPRHP
Trigger: CGGGTGCCGAGGAATAGGCCATATCCGTGGTCCACG...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGATGTCCCGAATAACGTaGACCACGGATATGGCCTAT +
Preference number: 4 (lower is better)
Translates to: GQMESAVSHLCVPICSHLMSRIT*TTDMAY
Trigger: ATAGGCCATATCCGTGGTCCACGTTATTCGGGACAT...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACCATCCCCTGACTTCTTaGCCTGAGGCAATATCTTCT +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYHPLTS*PEAISS
Trigger: AGAAGATATTGCCTCAGGCCAAGAAGTCAGGGGATG...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GTGCCGCTCCATGTGTTAAGAACTGCTCGTCAGATTTTATTGCTAAAGGACACGTCCAAGCGTCCGTCCTaGTCCAAACGCTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: VPLHVLRTARQILLLKDTSKRPS*SKRSLE
Trigger: TTCCAAAGAGCGTTTGGATCAGGACGGACGCTTGGA...CGTGTCCTTTAGCAATAAAATCTGACGAGCAGTTCTTAACACATGGAGCGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTCTCTCAAACGATCGTaGAGTGTTGCCTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYSLKRS*SVASFF
Trigger: GAAAAAGGAGGCAACACTTCACGATCGTTTGAGAGA...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAACGTGGACATGGACACTaGCTGGTGAAGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQRGHGH*LVKHLL
Trigger: CAGCAGGTGCTTCACCAGTCAGTGTCCATGTCCACG...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGCGTGGACATGGACACTaGCTGGTGAAGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKRGHGH*LVKHLL
Trigger: CAGCAGGTGCTTCACCAGTCAGTGTCCATGTCCACG...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTCCGAAAAGGGTGGGCTaGCACCGTGGACATGGACAC +
Preference number: 4 (lower is better)
Translates to: STQKSHMKSFESTRPLALPKRVG*HRGHGH
Trigger: GTGTCCATGTCCACGGTGTCAGCCCACCCTTTTCGG...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCACCTGACTTCTTGGCCTaGGGCAATATCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AHSPRCNITQLLITGVLAPDFLA*GNIFFR
Trigger: CCTGAAGAAGATATTGCCTCAGGCCAAGAAGTCAGG...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGCTCCATGGCAGATCTaGGCCAAGCTCGATGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFAPWQI*AKLDVA
Trigger: AGCAACATCGAGCTTGGCTCAGATCTGCCATGGAGC...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCGTTGGGCTGTTTCATTaGCACCCCCGCACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFVGLFH*HPRTPW
Trigger: CCAAGGAGTGCGGGGGTGGCAATGAAACAGCCCAAC...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCAGATATCAGGGCTGTCTaGCTCCACCCAGTAGTCATA +
Preference number: 4 (lower is better)
Translates to: AHSPRCNITQLLITGVLADIRAV*LHPVVI
Trigger: TATGACTACTGGGTGGAGGCAGACAGCCCTGATATC...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACGGCACTTCCAGTGGATaGCCTGTGACATCACACCAT +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHGTSSG*PVTSHH
Trigger: ATGGTGTGATGTCACAGGGCATCCACTGGAAGTGCC...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCACGATCGTGAAGTGTTaGCTCCTTTTTCAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLTIVKC*LLFQVH
Trigger: ATGAACTTGAAAAAGGAGGCAACACTTCACGATCGT...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAAAGCAACTTGCAGTGTTaGTCCCTGCCGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQSNLQC*SLPRGR
Trigger: CCTTCCCCTCGGCAGGGAGCAACACTGCAAGTTGCT...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCAGCAACTTGCAGTGTTaGTCCCTGCCGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFSNLQC*SLPRGR
Trigger: CCTTCCCCTCGGCAGGGAGCAACACTGCAAGTTGCT...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGCGCCTGGAAGCAACTTaGAGTGTTGCTCCCTGCCGA +
Preference number: 4 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKRLEAT*SVAPCR
Trigger: TCGGCAGGGAGCAACACTGCAAGTTGCTTCCAGGCG...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACCAGGGGAACCAGCATTaGTCCAAAAATCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYQGNQH*SKNHSN
Trigger: GTTGCTATGATTTTTGGACCAATGCTGGTTCCCCTG...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAACACCATCCGATCGGGTaGATATCAGGGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQHHPIG*ISGLSA
Trigger: GGCAGACAGCCCTGATATCCACCCGATCGGATGGTG...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGGTGCAGGTGAGCGTCTaGCCCAGCAGCCACACCAGT +
Preference number: 4 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQVQVSV*PSSHTS
Trigger: ACTGGTGTGGCTGCTGGGCCAGACGCTCACCTGCAC...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAGGACAGACAGCTTaGCCTGGAAGGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFVGQTA*PGRIFR
Trigger: CCTGAAGATCCTTCCAGGTCAAGCTGTCTGTCCTAC...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTATGGGCCTAAGCCTCTaGGTCATTGGCACTGGACCA +
Preference number: 4 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLMGLSL*VIGTGP
Trigger: TGGTCCAGTGCCAATGACTCAGAGGCTTAGGCCCAT...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCATCACATGAAGTCTTTTaGAAGCACCAGGCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: AHSPRCNITQLLITGVLASHEVF*KHQASS
Trigger: GCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGA...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTTTGGAAGTGCCCACCTaGCCGTCCTCTCATTACTCC +
Preference number: 4 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLLEVPT*PSSHYS
Trigger: GGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAA...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACCAGCTCAACAGGTGCTaGGACAGCCTTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHQLNRC*DSLLFF
Trigger: AAAGAACAGAAGGCTGTCGCAGCACCTGTTGAGCTG...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGGATGTCGGGGATCAATaGCTTCTAATCTCATTCCAA +
Preference number: 4 (lower is better)
Translates to: GQMESAVSHLCVPICSHLDVGDQ*LLISFQ
Trigger: TTGGAATGAGATTAGAAGGCATTGATCCCCGACATC...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGATCTTCAACAATATCTaGTATGGTCGCCACACACAC +
Preference number: 4 (lower is better)
Translates to: GQMESAVSHLCVPICSHLIFNNI*YGRHTH
Trigger: GTGTGTGTGGCGACCATAGCAGATATTGTTGAAGAT...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACAACTTTGGCAGGAACTaGATTGGTTTGAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYNFGRN*IGLSSF
Trigger: GAAGCTACTCAAACCAATGCAGTTCCTGCCAAAGTT...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGTGCAGTGTTGCTCCCTaGCGAGGGGAAGGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQCSVAP*RGEGPE
Trigger: TTCGGGACCTTCCCCTCGGCAGGGAGCAACACTGCA...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACGTTGTAAATCTTCAGTaGTGGGCCCAGTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYVVNLQ*WAQFDL
Trigger: AAGATCAAACTGGGCCCAGCACTGAAGATTTACAAC...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCAGCAGGAATTTTACTTaGACATGGCAGTCTACAAAA +
Preference number: 4 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLSRNFT*TWQSTK
Trigger: TTTTGTAGACTGCCATGTGCAAGTAAAATTCCTGCT...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp CAGCCCCAGCACGGCTTCATGGGGAATGGCAGAGGAACAAGAGATGAAGGGCAAACAATGTATGTGGTATaGCATCACTTGTGTAAATAC +
Preference number: 4 (lower is better)
Translates to: QPQHGFMGNGRGTRDEGQTMYVV*HHLCKY
Trigger: GTATTTACACAAGTGATGGCATACCACATACATTGT...TTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCATGAAGCCGTGCTGGGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp GTGCCGCTCCATGTGTTAAGAACTGCTCGTCAGATTTTATTGCTAAAGGACACGCACACAGAATACCGATaGATGTCGGGGATCAATGCC +
Preference number: 4 (lower is better)
Translates to: VPLHVLRTARQILLLKDTHTEYR*MSGINA
Trigger: GGCATTGATCCCCGACATCCATCGGTATTCTGTGTG...CGTGTCCTTTAGCAATAAAATCTGACGAGCAGTTCTTAACACATGGAGCGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCACAACAATATCTGCTATaGTCGCCACACACACCAAGG +
Preference number: 4 (lower is better)
Translates to: AHSPRCNITQLLITGVLAQQYLL*SPHTPR
Trigger: CCTTGGTGTGTGTGGCGACCATAGCAGATATTGTTG...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGCCAGGAAAAATTTTCTaGATTGGGATAACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GQMESAVSHLCVPICSHLPGKIF*IGITLG
Trigger: CCCCAAGGTTATCCCAATCCAGAAAATTTTTCCTGG...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAAGTCATTCGTTCGCTGTaGCACTTCCAGTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQVIRSL*HFQWMP
Trigger: GGGCATCCACTGGAAGTGCCACAGCGAACGAATGAC...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTGGTGGGCTGACACCGTaGACATGGACACTGACTGGT +
Preference number: 4 (lower is better)
Translates to: STQKSHMKSFESTRPLALGGLTP*TWTLTG
Trigger: ACCAGTCAGTGTCCATGTCCACGGTGTCAGCCCACC...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCGGTCTCTCCAGCTTTTaGAAGTGCCCACCTGACCGT +
Preference number: 4 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFGLSSF*KCPPDR
Trigger: ACGGTCAGGTGGGCACTTCCAAAAGCTGGAGAGACC...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTCTCCCCACCCACAAATaGTGTCCCTCCACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: STQKSHMKSFESTRPLALLPTHK*CPSTSG
Trigger: CCCAGAAGTGGAGGGACACCATTTGTGGGTGGGGAG...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACAAGCTTCCCCAGTAGGTaGGACTATAGGCACCCGCCA +
Preference number: 4 (lower is better)
Translates to: LFSSQADTYRRHFEASFTSFPSR*DYRHPP
Trigger: TGGCGGGTGCCTATAGTCCCACCTACTGGGGAAGCT...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGGGGAACAGCTTACTATaGTCAAGTTCACAAAGGGTA +
Preference number: 4 (lower is better)
Translates to: GQMESAVSHLCVPICSHLGNSLL*SSSQRV
Trigger: TACCCTTTGTGAACTTGACCATAGTAAGCTGTTCCC...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTCACCATCCTACTGGATaGATGTCAGGGGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLHHPTG*MSGEPA
Trigger: TGCTGGTTCCCCTGACATTCATCCAGTAGGATGGTG...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACAGCTTCATTCCAACCTaGAATTCTTTAGACATTGGC +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYSFIPT*NSLDIG
Trigger: GCCAATGTCTAAAGAATTTCAGGTTGGAATGAAGCT...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGATGGACACTGACTGGTaGAGCACCTGCTGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: EHCFSNISPLESVMLVRWMDTDW*STCCAC
Trigger: GCAGGCGCAGCAGGTGCTTCACCAGTCAGTGTCCAT...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACTCACATGAAGTCTTTTaGAAGCACCAGGCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHSHEVF*KHQASS
Trigger: GCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGA...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACAGACTGCAGTGGAAATaGGTCAATTCTGAAACGCCC +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHRLQWK*VNSETP
Trigger: GGGCGTTTCAGAATTGACTCATTTCCACTGCAGTCT...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GTGCCGCTCCATGTGTTAAGAACTGCTCGTCAGATTTTATTGCTAAAGGACACGACGAGTAAGGGTAGCTaGGGAAATGCCGAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: VPLHVLRTARQILLLKDTTSKGS*GNAEKD
Trigger: ATCCTTTTCGGCATTTCCTCAGCTACCCTTACTCGT...CGTGTCCTTTAGCAATAAAATCTGACGAGCAGTTCTTAACACATGGAGCGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCACAGCTCAACAGGTGCTaGGACAGCCTTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPQLNRC*DSLLFF
Trigger: AAAGAACAGAAGGCTGTCGCAGCACCTGTTGAGCTG...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACAGCCAAGCTCGATGTTaGTCTGGTAAAAACATTAAC +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYSQARC*SGKNIN
Trigger: GTTAATGTTTTTACCAGAGCAACATCGAGCTTGGCT...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACAACGATCTCAGCTCACTaGCTCCACCTCCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LFSSQADTYRRHFEASFTTISAH*LHLPGS
Trigger: TGAACCTGGGAGGTGGAGGCAGTGAGCTGAGATCGT...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACCTGACACCAACCAACTaGCTGGACATAAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHLTPTN*LDIRAI
Trigger: AATAGCCCTTATGTCCAGCCAGTTGGTTGGTGTCAG...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGCACCATCCGATCGGGTaGATATCAGGGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQHHPIG*ISGLSA
Trigger: GGCAGACAGCCCTGATATCCACCCGATCGGATGGTG...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCCTGACACCGTGGACATaGACACTGACTGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFLTPWT*TLTGEA
Trigger: TGCTTCACCAGTCAGTGTCCATGTCCACGGTGTCAG...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCAGGCTCCAGGAAAGCTTaGGAGCACAACCAAGAAATG +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPGSRKA*EHNQEM
Trigger: CATTTCTTGGTTGTGCTCCCAAGCTTTCCTGGAGCC...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCATTATTACAGGGGTTCTaGCAGACTGCAGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: AHSPRCNITQLLITGVLALLQGF*QTAVEM
Trigger: CATTTCCACTGCAGTCTGCCAGAACCCCTGTAATAA...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACGTGTCCCTCCACTTCTaGGAGAGTATTTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHVSLHF*ESICSC
Trigger: ACAGCTACAAATACTCTCCCAGAAGTGGAGGGACAC...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCATGCTCTGGAAAGGACTaGTCCTTGGAAAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPCSGKD*SLENSS
Trigger: TGAGCTGTTTTCCAAGGATCAGTCCTTTCCAGAGCA...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp ACAATTTCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCCCAGTGGATGCCCTGTaGCATCACACCATCCGATCG +
Preference number: 4 (lower is better)
Translates to: TISSFPLPSWSMFPFYSCPVDAL*HHTIRS
Trigger: CGATCGGATGGTGTGATGTCACAGGGCATCCACTGG...GCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGAAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTGTAGGACAGACAGCTTaGCCTGGAAGGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: STQKSHMKSFESTRPLALVGQTA*PGRIFR
Trigger: CCTGAAGATCCTTCCAGGTCAAGCTGTCTGTCCTAC...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACTTTCAAGTTCATGTCTaGATACGGGCAGCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHFQVHV*IRAAKS
Trigger: GCTTTTGGCTGCCCGTATTCAGACATGAACTTGAAA...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTCCTGACTTCTTGGCCTaGGGCAATATCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLPDFLA*GNIFFR
Trigger: CCTGAAGAAGATATTGCCTCAGGCCAAGAAGTCAGG...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTAGCCCATTCATCCCCTaGCTTCTTGGCCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SICKDAHSPRCNITQLLISPFIP*LLGLRQ
Trigger: TTGCCTCAGGCCAAGAAGTCAGGGGATGAATGGGCT...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTATGGGCCTAAGCCTCTaGGTCATTGGCACTGGACCA +
Preference number: 4 (lower is better)
Translates to: SICKDAHSPRCNITQLLIMGLSL*VIGTGP
Trigger: TGGTCCAGTGCCAATGACTCAGAGGCTTAGGCCCAT...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCACAAACAAATCAGAGCTaGGCGGATCCCACCAAAGAT +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPQTNQS*ADPTKD
Trigger: ATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTG...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTTTGGAAGTGCCCACCTaGCCGTCCTCTCATTACTCC +
Preference number: 4 (lower is better)
Translates to: SICKDAHSPRCNITQLLILEVPT*PSSHYS
Trigger: GGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAA...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGATGGTCTTGATCTCCTaGTCTCGTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLMVLIS*SRDLPA
Trigger: GGCAGGCAGATCACGAGATCAGGAGATCAAGACCAT...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAATGGACAGTTGTTGGCTaGGCAGAGAGGACATGGCCT +
Preference number: 4 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKWTVVG*AERTWP
Trigger: AGGCCATGTCCTCTCTGCTCAGCCAACAACTGTCCA...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp GTGCCGCTCCATGTGTTAAGAACTGCTCGTCAGATTTTATTGCTAAAGGACACGCTTTACACAGCAACATaGAAACCATCCAGATGGCCA +
Preference number: 4 (lower is better)
Translates to: VPLHVLRTARQILLLKDTLYTAT*KPSRWP
Trigger: TGGCCATCTGGATGGTTTTCATGTTGCTGTGTAAAG...CGTGTCCTTTAGCAATAAAATCTGACGAGCAGTTCTTAACACATGGAGCGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp AACAACCAGGCAGCCAAATTACACCCAGAGGTTTTTCCCTTTATAAATACAATAGTTGGGCTGTTTCATTaGCACCCCCGCACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NNQAAKLHPEVFPFINTIVGLFH*HPRTPW
Trigger: CCAAGGAGTGCGGGGGTGGCAATGAAACAGCCCAAC...TATTGTATTTATAAAGGGAAAAACCTCTGGGTGTAATTTGGCTGCCTGGTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCAATCTTCAACAATATCTaGTATGGTCGCCACACACAC +
Preference number: 4 (lower is better)
Translates to: AHSPRCNITQLLITGVLAIFNNI*YGRHTH
Trigger: GTGTGTGTGGCGACCATAGCAGATATTGTTGAAGAT...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACGGGATAACCTTGGGGTaGTATCAGAGTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHGITLG*YQSSSI
Trigger: AATGGAAGAACTCTGATAGCACCCCAAGGTTATCCC...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACTTAAAGCACTTGGCATaGTCTTCACAGCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHLKHLA*SSQPRR
Trigger: TCTTCTGGGCTGTGAAGAGCATGCCAAGTGCTTTAA...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTTCCAGCTTTTGGAAGTaGCCACCTGACCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SICKDAHSPRCNITQLLISSFWK*PPDRPL
Trigger: GAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGGA...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGTCCAGCTTTTGGAAGTaGCCACCTGACCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQSSFWK*PPDRPL
Trigger: GAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGGA...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCAGGGGTTCTGGCAGACTaGAGTGGAAATGAGTCAATT +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPGVLAD*SGNESI
Trigger: AATTGACTCATTTCCACTGCAGTCTGCCAGAACCCC...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGTGCAGAGAAGATAAATaGCTTCCTTCACCTTATTGT +
Preference number: 4 (lower is better)
Translates to: GQMESAVSHLCVPICSHLCREDK*LPSPYC
Trigger: ACAATAAGGTGAAGGAAGGCATTTATCTTCTCTGCA...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTAGCTGTAGCAGCTTGTaGATGTTCCTCAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: STQKSHMKSFESTRPLALSCSSL*MFLRRP
Trigger: GGGCCTTCTGAGGAACATGCACAAGCTGCTACAGCT...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400105.6
CDS-3UTR GCA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGTCCAAACCTCTGGGATaGAGCACAAGCACTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKSKPLG*STSTLK
Trigger: CTTCAGAGTGCTTGTGCTGCATCCCAGAGGTTTGGA...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400105.6
CDS-3UTR CCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACCAGGGGAACCAGCATTaGTCCAAAAATCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHQGNQH*SKNHSN
Trigger: GTTGCTATGATTTTTGGACCAATGCTGGTTCCCCTG...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCACAACACGAATTAACCTaGGGTTCCGTTTATCCACAA +
Preference number: 4 (lower is better)
Translates to: AHSPRCNITQLLITGVLAQHELT*GSVYPQ
Trigger: TTGTGGATAAACGGAACCCCAGGTTAATTCGTGTTG...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCACATCCCCTGACTTCTTaGCCTGAGGCAATATCTTCT +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPHPLTS*PEAISS
Trigger: AGAAGATATTGCCTCAGGCCAAGAAGTCAGGGGATG...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAAAGTCCAGATTCAGTGTaGATACGGCCATGGGGACAT +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQSPDSV*IRPWGH
Trigger: ATGTCCCCATGGCCGTATCCACACTGAATCTGGACT...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTGGTCTCTCCAGCTTTTaGAAGTGCCCACCTGACCGT +
Preference number: 4 (lower is better)
Translates to: SICKDAHSPRCNITQLLIGLSSF*KCPPDR
Trigger: ACGGTCAGGTGGGCACTTCCAAAAGCTGGAGAGACC...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTTGCTCTGGAAAGGACTaGTCCTTGGAAAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLCSGKD*SLENSS
Trigger: TGAGCTGTTTTCCAAGGATCAGTCCTTTCCAGAGCA...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCAGGAACTGCATTGGTTTaGGTAGCTTCCAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPGTALV*VASRYS
Trigger: AGAATACCTGGAAGCTACTCAAACCAATGCAGTTCC...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCTGTACAAGTCTGGGCTaGCTGTTCACCTTTTCATGT +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFCTSLG*LFTFSC
Trigger: ACATGAAAAGGTGAACAGTCAGCCCAGACTTGTACA...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGCTCCACTTTTATTGCTaGAAGAGCGCAGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKLHFYC*KSAGLG
Trigger: ACCAAGACCTGCGCTCTTTCAGCAATAAAAGTGGAG...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTCTCCACTTTTATTGCTaGAAGAGCGCAGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLLHFYC*KSAGLG
Trigger: ACCAAGACCTGCGCTCTTTCAGCAATAAAAGTGGAG...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTAGACTGCAGTGGAAATaGGTCAATTCTGAAACGCCC +
Preference number: 4 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLRLQWK*VNSETP
Trigger: GGGCGTTTCAGAATTGACTCATTTCCACTGCAGTCT...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp AACAACCAGGCAGCCAAATTACACCCAGAGGTTTTTCCCTTTATAAATACAATATGGGCCGGTCAGTTCTaGTTTCAGCAGGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: NNQAAKLHPEVFPFINTIWAGQF*FQQGSF
Trigger: GAATGAGCCCTGCTGAAATCAGAACTGACCGGCCCA...TATTGTATTTATAAAGGGAAAAACCTCTGGGTGTAATTTGGCTGCCTGGTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGCAGCACAAGCACTCTaGAGAGATTATCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFAAQAL*RDYPSQ
Trigger: TTGACTTGGATAATCTCTTCAGAGTGCTTGTGCTGC...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400105.6
CDS-3UTR GCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGACTCAAAGGGGTTGTaGTATCCTTGGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFDSKGL*YPWASF
Trigger: AAAAGAAGCCCAAGGATAGCACAACCCCTTTGAGTC...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAAGAAGCAGGAAGGCTTTaGCATCGATCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQEAGRL*HRSALS
Trigger: AGAAAGAGCAGATCGATGGCAAAGCCTTCCTGCTTC...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCGGGGTTCTGGCAGACTaGAGTGGAAATGAGTCAATT +
Preference number: 4 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFGVLAD*SGNESI
Trigger: AATTGACTCATTTCCACTGCAGTCTGCCAGAACCCC...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACACCATTTTCATGCTCTaGAAAGGACTGATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHTIFML*KGLILG
Trigger: TCCAAGGATCAGTCCTTTCCAGAGCATGAAAATGGT...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACAAATTCTTTAGACATTaGCCCATTAGGACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PHPQMVSLHFWESICSCYKFFRH*PIRTSV
Trigger: AACAGAAGTCCTAATGGGCCAATGTCTAAAGAATTT...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCACAGACAGCTTGACCTaGAAGGATCTTCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFTDSLT*KDLQVI
Trigger: AATGACCTGAAGATCCTTCCAGGTCAAGCTGTCTGT...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAACCTGCTGTACAAGTCTaGGCTGACTGTTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQPAVQV*ADCSPF
Trigger: AAAAGGTGAACAGTCAGCCCAGACTTGTACAGCAGG...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCCCTGCTGTACAAGTCTaGGCTGACTGTTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFPAVQV*ADCSPF
Trigger: AAAAGGTGAACAGTCAGCCCAGACTTGTACAGCAGG...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGAAAGAGCGCAGGTCTTaGTGCCAGAGGAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQKERRS*CQRKFR
Trigger: CCTGAACTTCCTCTGGCACCAAGACCTGCGCTCTTT...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGCCTCTGAGTCATTaGCACTGGACCAGTCATCAA +
Preference number: 4 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKKPLSH*HWTSHQ
Trigger: TTGATGACTGGTCCAGTGCCAATGACTCAGAGGCTT...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCAAGCCTCTGAGTCATTaGCACTGGACCAGTCATCAA +
Preference number: 4 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFKPLSH*HWTSHQ
Trigger: TTGATGACTGGTCCAGTGCCAATGACTCAGAGGCTT...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAAGCTGGTGATGTACAGTaGCACGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKAGDVQ*HDLSSL
Trigger: CAGTGAGCTGAGATCGTGCCACTGTACATCACCAGC...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTAGTATTCCAAACCTCTaGGATGCAGCACAAGCACTC +
Preference number: 4 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLSIPNL*DAAQAL
Trigger: GAGTGCTTGTGCTGCATCCCAGAGGTTTGGAATACT...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400105.6
CDS-3UTR TCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACAGTGGTTTTATGGTCTaGCACGTATTCTTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHSGFMV*HVFLVR
Trigger: TCTTACCAAGAATACGTGTCAGACCATAAAACCACT...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGTCCAAGCGTCCGTCCTaGTCCAAACGCTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: EHCFSNISPLESVMLVRWSKRPS*SKRSLE
Trigger: TTCCAAAGAGCGTTTGGATCAGGACGGACGCTTGGA...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACATGCTCTGGAAAGGACTaGTCCTTGGAAAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: LFSSQADTYRRHFEASFTCSGKD*SLENSS
Trigger: TGAGCTGTTTTCCAAGGATCAGTCCTTTCCAGAGCA...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCATTTGGCAGAAAACCATaGGGCAACCTCATTTTAAAA +
Preference number: 4 (lower is better)
Translates to: AHSPRCNITQLLITGVLAFGRKP*GNLILK
Trigger: TTTTAAAATGAGGTTGCCTCATGGTTTTCTGCCAAA...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGTCTCTCAAACGATCGTaGAGTGTTGCCTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKSLKRS*SVASFF
Trigger: GAAAAAGGAGGCAACACTTCACGATCGTTTGAGAGA...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAAACCGCACTCGGCCTCTaGAGAGATTATCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKTALGL*RDYPSQ
Trigger: TTGACTTGGATAATCTCTTCAGAGGCCGAGTGCGGT...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTACAGCTCAACAGGTGCTaGGACAGCCTTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLQLNRC*DSLLFF
Trigger: AAAGAACAGAAGGCTGTCGCAGCACCTGTTGAGCTG...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCAAACTTTGGCAGGAACTaGATTGGTTTGAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPNFGRN*IGLSSF
Trigger: GAAGCTACTCAAACCAATGCAGTTCCTGCCAAAGTT...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AACAACCAGGCAGCCAAATTACACCCAGAGGTTTTTCCCTTTATAAATACAATAGGCACTTCCAGTGGATaGCCTGTGACATCACACCAT +
Preference number: 4 (lower is better)
Translates to: NNQAAKLHPEVFPFINTIGTSSG*PVTSHH
Trigger: ATGGTGTGATGTCACAGGGCATCCACTGGAAGTGCC...TATTGTATTTATAAAGGGAAAAACCTCTGGGTGTAATTTGGCTGCCTGGTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAATTAAAGCACTTGGCATaGTCTTCACAGCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQLKHLA*SSQPRR
Trigger: TCTTCTGGGCTGTGAAGAGCATGCCAAGTGCTTTAA...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTGGGAGTTCCTGGGAATaGCTGAACATCAGGATAGAG +
Preference number: 4 (lower is better)
Translates to: SICKDAHSPRCNITQLLIGSSWE*LNIRIE
Trigger: CTCTATCCTGATGTTCAGGCATTCCCAGGAACTCCC...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAACGCACTCCTTGGCAGTaGTTTTATGGTCTGACACGT +
Preference number: 4 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKRTPWQ*FYGLTR
Trigger: ACGTGTCAGACCATAAAACCACTGCCAAGGAGTGCG...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCAACCATTTTCATGCTCTaGAAAGGACTGATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPTIFML*KGLILG
Trigger: TCCAAGGATCAGTCCTTTCCAGAGCATGAAAATGGT...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTATGTCCCGAATAACGTaGACCACGGATATGGCCTAT +
Preference number: 4 (lower is better)
Translates to: STQKSHMKSFESTRPLALMSRIT*TTDMAY
Trigger: ATAGGCCATATCCGTGGTCCACGTTATTCGGGACAT...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGCCTGCTGTACAAGTCTaGGCTGACTGTTCACCTTTT +
Preference number: 4 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLPAVQV*ADCSPF
Trigger: AAAAGGTGAACAGTCAGCCCAGACTTGTACAGCAGG...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGGATGTCAGCCACGCCTaGAAGCAACTTGCAGTGTTG +
Preference number: 4 (lower is better)
Translates to: EHCFSNISPLESVMLVRWDVSHA*KQLAVL
Trigger: CAACACTGCAAGTTGCTTCCAGGCGTGGCTGACATC...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGGTGTGGATACGGCCATaGGGACATTCACATCAAATT +
Preference number: 4 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKVWIRP*GHSHQI
Trigger: AATTTGATGTGAATGTCCCCATGGCCGTATCCACAC...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTCTGAGTCATTGGCACTaGACCAGTCATCAAAATCCT +
Preference number: 4 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLLSHWH*TSHQNP
Trigger: AGGATTTTGATGACTGGTCCAGTGCCAATGACTCAG...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAACTGAGTCATTGGCACTaGACCAGTCATCAAAATCCT +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQLSHWH*TSHQNP
Trigger: AGGATTTTGATGACTGGTCCAGTGCCAATGACTCAG...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTGGCTCCAGGAAAGCTTaGGAGCACAACCAAGAAATG +
Preference number: 4 (lower is better)
Translates to: SICKDAHSPRCNITQLLIGSRKA*EHNQEM
Trigger: CATTTCTTGGTTGTGCTCCCAAGCTTTCCTGGAGCC...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCTTATTACAGGGGTTCTaGCAGACTGCAGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFLLQGF*QTAVEM
Trigger: CATTTCCACTGCAGTCTGCCAGAACCCCTGTAATAA...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCAGCTTCATTCCAACCTaGAATTCTTTAGACATTGGC +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFSFIPT*NSLDIG
Trigger: GCCAATGTCTAAAGAATTTCAGGTTGGAATGAAGCT...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GTGCCGCTCCATGTGTTAAGAACTGCTCGTCAGATTTTATTGCTAAAGGACACGTTTGGCAGAAAACCATaGGGCAACCTCATTTTAAAA +
Preference number: 4 (lower is better)
Translates to: VPLHVLRTARQILLLKDTFGRKP*GNLILK
Trigger: TTTTAAAATGAGGTTGCCTCATGGTTTTCTGCCAAA...CGTGTCCTTTAGCAATAAAATCTGACGAGCAGTTCTTAACACATGGAGCGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCTCCCAACCATCAAAATaGACCTTTACTCTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFSQPSK*TFTLWS
Trigger: TGACCAAAGAGTAAAGGTTCATTTTGATGGTTGGGA...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCATCCCAACCATCAAAATaGACCTTTACTCTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPSQPSK*TFTLWS
Trigger: TGACCAAAGAGTAAAGGTTCATTTTGATGGTTGGGA...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACATTTCAAGTTCATGTCTaGATACGGGCAGCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LFSSQADTYRRHFEASFTFQVHV*IRAAKS
Trigger: GCTTTTGGCTGCCCGTATTCAGACATGAACTTGAAA...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTTGTACAAGTCTGGGCTaGCTGTTCACCTTTTCATGT +
Preference number: 4 (lower is better)
Translates to: STQKSHMKSFESTRPLALCTSLG*LFTFSC
Trigger: ACATGAAAAGGTGAACAGTCAGCCCAGACTTGTACA...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACATGTACAAGTCTGGGCTaGCTGTTCACCTTTTCATGT +
Preference number: 4 (lower is better)
Translates to: LFSSQADTYRRHFEASFTCTSLG*LFTFSC
Trigger: ACATGAAAAGGTGAACAGTCAGCCCAGACTTGTACA...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTCCACCGAGTATTCTCTaGAGAGATTATCCAAGTCAA +
Preference number: 4 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLPPSIL*RDYPSQ
Trigger: TTGACTTGGATAATCTCTTCAGAGAATACTCGGTGG...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317931.12
CDS-3UTR TCA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGGAAATGAGTCAATTCTaGAACGCCCTTCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQEMSQF*NALQSG
Trigger: CCCACTCTGAAGGGCGTTTCAGAATTGACTCATTTC...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp ACAATTTCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCGGAAGCTGGGGTTTGTaGTCATGGAGAAAAGCCACA +
Preference number: 4 (lower is better)
Translates to: TISSFPLPSWSMFPFYSCGSWGL*SWRKAT
Trigger: TGTGGCTTTTCTCCATGATCACAAACCCCAGCTTCC...GCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCGATGTCGGGGATCAATaGCTTCTAATCTCATTCCAA +
Preference number: 4 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFDVGDQ*LLISFQ
Trigger: TTGGAATGAGATTAGAAGGCATTGATCCCCGACATC...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGATCTTCAACAATATCTaGTATGGTCGCCACACACAC +
Preference number: 4 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKIFNNI*YGRHTH
Trigger: GTGTGTGTGGCGACCATAGCAGATATTGTTGAAGAT...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTGAAGCAGGAAGGCTTTaGCATCGATCTGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SICKDAHSPRCNITQLLIEAGRL*HRSALS
Trigger: AGAAAGAGCAGATCGATGGCAAAGCCTTCCTGCTTC...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGGGGAGTTCCTGGGAATaGCTGAACATCAGGATAGAG +
Preference number: 4 (lower is better)
Translates to: EHCFSNISPLESVMLVRWGSSWE*LNIRIE
Trigger: CTCTATCCTGATGTTCAGGCATTCCCAGGAACTCCC...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCTTCTTTGGTCTGTCTTaGAAACAAATCAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFFFGLS*KQIRAE
Trigger: CTCAGCTCTGATTTGTTTGCAAGACAGACCAAAGAA...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCATTCTTTGGTCTGTCTTaGAAACAAATCAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPFFGLS*KQIRAE
Trigger: CTCAGCTCTGATTTGTTTGCAAGACAGACCAAAGAA...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp ACAATTTCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTTCAAGCAATTCTCCTaGCTCAGCTTCCCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: TISSFPLPSWSMFPFYSCFKQFS*LSFPSR
Trigger: CCTACTGGGGAAGCTGAGGCAGGAGAATTGCTTGAA...GCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTAAGGGCAAATGGAAAGTaGTGTCTCACACCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLRANGK*CLTPLC
Trigger: ACACAGAGGTGTGAGACAGCACTTTCCATTTGCCCT...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTTTGGCAGTGGTTTTATaGTCTGACACGTATTCTTGG +
Preference number: 4 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLLAVVL*SDTYSW
Trigger: CCAAGAATACGTGTCAGACCATAAAACCACTGCCAA...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCTTGGCAGTGGTTTTATaGTCTGACACGTATTCTTGG +
Preference number: 4 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFLAVVL*SDTYSW
Trigger: CCAAGAATACGTGTCAGACCATAAAACCACTGCCAA...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGGAAAGGACTGATCCTTaGAAAACAGCTCAACAGGTG +
Preference number: 4 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLERTDP*KTAQQV
Trigger: CACCTGTTGAGCTGTTTTCCAAGGATCAGTCCTTTC...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTGAAAGGACTGATCCTTaGAAAACAGCTCAACAGGTG +
Preference number: 4 (lower is better)
Translates to: STQKSHMKSFESTRPLALERTDP*KTAQQV
Trigger: CACCTGTTGAGCTGTTTTCCAAGGATCAGTCCTTTC...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGGTAAATCTTCAGTGCTaGGCCCAGTTTGATCTTCAT +
Preference number: 4 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKVNLQC*AQFDLH
Trigger: ATGAAGATCAAACTGGGCCCAGCACTGAAGATTTAC...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCATGTGTGGGCTTCTTTaGTCTGTCTTGCAAACAAAT +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFMCGLL*SVLQTN
Trigger: ATTTGTTTGCAAGACAGACCAAAGAAGCCCACACAT...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAAATAAAGGTGGATGTGTaGGCTTCTTTGGTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQIKVDV*ASLVCL
Trigger: AAGACAGACCAAAGAAGCCCACACATCCACCTTTAT...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGTCCTCTCATTACTCCTaGCTACTCTCCTTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQSSHYS*LLSFVE
Trigger: CTCCACAAAGGAGAGTAGCCAGGAGTAATGAGAGGA...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTAGGAACTGCATTGGTTTaGGTAGCTTCCAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLGTALV*VASRYS
Trigger: AGAATACCTGGAAGCTACTCAAACCAATGCAGTTCC...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCCACAAAAATCTCACATaGAGTCTTTTGAAAGCACCA +
Preference number: 4 (lower is better)
Translates to: LSCKQIRAERIPPKITMFHKNLT*SLLKAP
Trigger: TGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTG...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGTGGCCGTCTAACTTCTaGACATTTATAAGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLWPSNF*TFISCE
Trigger: CTCGCAACTTATAAATGTTCAGAAGTTAGACGGCCA...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTTCCCAGTTGTCAAAATaGACTAGTAAGCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLSQLSK*TSKRSS
Trigger: TGAAGATCGCTTACTAGTGCATTTTGACAACTGGGA...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTGGGATAACCTTGGGGTaGTATCAGAGTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: SICKDAHSPRCNITQLLIGITLG*YQSSSI
Trigger: AATGGAAGAACTCTGATAGCACCCCAAGGTTATCCC...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCACGATCGTGAAGTGTTaGCTCCTTTTTCAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFTIVKC*LLFQVH
Trigger: ATGAACTTGAAAAAGGAGGCAACACTTCACGATCGT...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTGATTTTCAAACACTTTaGCTGCTGTACAAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: STQKSHMKSFESTRPLALDFQTL*LLYKSG
Trigger: CCCAGACTTGTACAGCAGGCAAAGTGTTTGAAAATC...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTGCTTTGCCATCGATCTaGTCTTTCTTAAAGCACTTG +
Preference number: 4 (lower is better)
Translates to: STQKSHMKSFESTRPLALALPSI*SFLKHL
Trigger: CAAGTGCTTTAAGAAAGAGCAGATCGATGGCAAAGC...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTGTTGTAAATCTTCAGTaGTGGGCCCAGTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: STQKSHMKSFESTRPLALVVNLQ*WAQFDL
Trigger: AAGATCAAACTGGGCCCAGCACTGAAGATTTACAAC...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AACAACCAGGCAGCCAAATTACACCCAGAGGTTTTTCCCTTTATAAATACAATAGGTCAGTGTAATCTCTaGCTCCCAGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: NNQAAKLHPEVFPFINTIGQCNL*LPGSSN
Trigger: ATTGCTTGAACCTGGGAGGCAGAGATTACACTGACC...TATTGTATTTATAAAGGGAAAAACCTCTGGGTGTAATTTGGCTGCCTGGTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACATTGGCAGTGGTTTTATaGTCTGACACGTATTCTTGG +
Preference number: 4 (lower is better)
Translates to: LFSSQADTYRRHFEASFTLAVVL*SDTYSW
Trigger: CCAAGAATACGTGTCAGACCATAAAACCACTGCCAA...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACAAATTCTTTAGACATTaGCCCATTAGGACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: IRAERIPPKITMFVNQTHKFFRH*PIRTSV
Trigger: AACAGAAGTCCTAATGGGCCAATGTCTAAAGAATTT...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACACAACACGAATTAACCTaGGGTTCCGTTTATCCACAA +
Preference number: 4 (lower is better)
Translates to: LFSSQADTYRRHFEASFTQHELT*GSVYPQ
Trigger: TTGTGGATAAACGGAACCCCAGGTTAATTCGTGTTG...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAAACAGACAGCTTGACCTaGAAGGATCTTCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKTDSLT*KDLQVI
Trigger: AATGACCTGAAGATCCTTCCAGGTCAAGCTGTCTGT...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGATGTCCCGAATAACGTaGACCACGGATATGGCCTAT +
Preference number: 4 (lower is better)
Translates to: EHCFSNISPLESVMLVRWMSRIT*TTDMAY
Trigger: ATAGGCCATATCCGTGGTCCACGTTATTCGGGACAT...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACAGTCACCTGCATTGTGTaGTTTGTACCCATTAAAAGG +
Preference number: 4 (lower is better)
Translates to: LFSSQADTYRRHFEASFTVTCIV*FVPIKR
Trigger: CCTTTTAATGGGTACAAACCACACAATGCAGGTGAC...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGGGAACTGCATTGGTTTaGGTAGCTTCCAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: EHCFSNISPLESVMLVRWGTALV*VASRYS
Trigger: AGAATACCTGGAAGCTACTCAAACCAATGCAGTTCC...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAATTTGGCAGAAAACCATaGGGCAACCTCATTTTAAAA +
Preference number: 4 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQFGRKP*GNLILK
Trigger: TTTTAAAATGAGGTTGCCTCATGGTTTTCTGCCAAA...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAAATTTTCCAGTCAAGCTaGCACCTACAGAAGACACTT +
Preference number: 4 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKIFQSS*HLQKTL
Trigger: AAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAAT...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGACGATCGTGAAGTGTTaGCTCCTTTTTCAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLTIVKC*LLFQVH
Trigger: ATGAACTTGAAAAAGGAGGCAACACTTCACGATCGT...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTGATTTTCAAACACTTTaGCTGCTGTACAAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SICKDAHSPRCNITQLLIDFQTL*LLYKSG
Trigger: CCCAGACTTGTACAGCAGGCAAAGTGTTTGAAAATC...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAAGATTTTCAAACACTTTaGCTGCTGTACAAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKDFQTL*LLYKSG
Trigger: CCCAGACTTGTACAGCAGGCAAAGTGTTTGAAAATC...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCAGCAGGAATTTTACTTaGACATGGCAGTCTACAAAA +
Preference number: 4 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFSRNFT*TWQSTK
Trigger: TTTTGTAGACTGCCATGTGCAAGTAAAATTCCTGCT...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AACAACCAGGCAGCCAAATTACACCCAGAGGTTTTTCCCTTTATAAATACAATAAGAGTAATGGTCACCTaGATTGTGTGGTTTGTACCC +
Preference number: 4 (lower is better)
Translates to: NNQAAKLHPEVFPFINTIRVMVT*IVWFVP
Trigger: GGGTACAAACCACACAATGCAGGTGACCATTACTCT...TATTGTATTTATAAAGGGAAAAACCTCTGGGTGTAATTTGGCTGCCTGGTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAAGCTCTCTGGCTGGACTaGTCCATAAAACACTTAATA +
Preference number: 4 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKALWLD*SIKHLI
Trigger: TATTAAGTGTTTTATGGAGCAGTCCAGCCAGAGAGC...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGGAAAGGACTGATCCTTaGAAAACAGCTCAACAGGTG +
Preference number: 4 (lower is better)
Translates to: EHCFSNISPLESVMLVRWERTDP*KTAQQV
Trigger: CACCTGTTGAGCTGTTTTCCAAGGATCAGTCCTTTC...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGGTGTGGATACGGCCATaGGGACATTCACATCAAATT +
Preference number: 4 (lower is better)
Translates to: EHCFSNISPLESVMLVRWVWIRP*GHSHQI
Trigger: AATTTGATGTGAATGTCCCCATGGCCGTATCCACAC...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAAGTGTTCCTGGGCATTTaGGTTATAGGTTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKVFLGI*VIGFLV
Trigger: AACCAGAAAACCTATAACCCAAATGCCCAGGAACAC...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGACAGACAATCTTAGGTaGAGGACATCAAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLTDNLR*RTSRKK
Trigger: TTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGT...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
3UTR CAA 72 bp ATAAGTACCACGCTCCCTACTTTAGAGATCTTCCCTTaGAATAGTGTGTCTCCATTTGTAAAGATGCACACA +
Preference number: 4 (lower is better)
Translates to: ISTTLPTLEIFP*NSVSPFVKMHT
Trigger: TGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTCTAAAGTAGGGAGCGTGGTACTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTAGTGGTTTTATGGTCTaGCACGTATTCTTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: SICKDAHSPRCNITQLLISGFMV*HVFLVR
Trigger: TCTTACCAAGAATACGTGTCAGACCATAAAACCACT...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAAAGCTTCATTCCAACCTaGAATTCTTTAGACATTGGC +
Preference number: 4 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKSFIPT*NSLDIG
Trigger: GCCAATGTCTAAAGAATTTCAGGTTGGAATGAAGCT...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp ACAATTTCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCAACTTTGGCAGGAACTaGATTGGTTTGAGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: TISSFPLPSWSMFPFYSCNFGRN*IGLSSF
Trigger: GAAGCTACTCAAACCAATGCAGTTCCTGCCAAAGTT...GCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGAAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGATGTGTGGGCTTCTTTaGTCTGTCTTGCAAACAAAT +
Preference number: 4 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQMCGLL*SVLQTN
Trigger: ATTTGTTTGCAAGACAGACCAAAGAAGCCCACACAT...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAATTTATAGTTGCTCTCTaGCTGGACTGCTCCATAAAA +
Preference number: 4 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKFIVAL*LDCSIK
Trigger: TTTTATGGAGCAGTCCAGCCAGAGAGCAACTATAAA...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp ACAATTTCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCAGTGGTTTTATGGTCTaGCACGTATTCTTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: TISSFPLPSWSMFPFYSCSGFMV*HVFLVR
Trigger: TCTTACCAAGAATACGTGTCAGACCATAAAACCACT...GCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGAAATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp AACAACCAGGCAGCCAAATTACACCCAGAGGTTTTTCCCTTTATAAATACAATATCAAAGGGGATTTTGTaGGCTGATATATCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: NNQAAKLHPEVFPFINTISKGIL*ADISSA
Trigger: AGCAGAAGATATATCAGCTCACAAAATCCCCTTTGA...TATTGTATTTATAAAGGGAAAAACCTCTGGGTGTAATTTGGCTGCCTGGTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGTCCCAGTTGTCAAAATaGACTAGTAAGCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: EHCFSNISPLESVMLVRWSQLSK*TSKRSS
Trigger: TGAAGATCGCTTACTAGTGCATTTTGACAACTGGGA...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR GCA 90 bp AACAACCAGGCAGCCAAATTACACCCAGAGGTTTTTCCCTTTATAAATACAATATCCCAGTTGTCAAAATaGACTAGTAAGCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: NNQAAKLHPEVFPFINTISQLSK*TSKRSS
Trigger: TGAAGATCGCTTACTAGTGCATTTTGACAACTGGGA...TATTGTATTTATAAAGGGAAAAACCTCTGGGTGTAATTTGGCTGCCTGGTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGAGCCAAGCTCGATGTTaGTCTGGTAAAAACATTAAC +
Preference number: 4 (lower is better)
Translates to: EHCFSNISPLESVMLVRWSQARC*SGKNIN
Trigger: GTTAATGTTTTTACCAGAGCAACATCGAGCTTGGCT...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAATTCCCTTTACCAAGCTaGTCCATGTTTCCATTTTAT +
Preference number: 4 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKFPLPS*SMFPFY
Trigger: ATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAA...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR TCA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGCACAAAAATCTCACATaGAGTCTTTTGAAAGCACCA +
Preference number: 4 (lower is better)
Translates to: EHCFSNISPLESVMLVRWHKNLT*SLLKAP
Trigger: TGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTG...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR TCA 90 bp AACAACCAGGCAGCCAAATTACACCCAGAGGTTTTTCCCTTTATAAATACAATAAAGAGAAGTATACAGTaGTTATTCCAAGGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: NNQAAKLHPEVFPFINTIKRSIQ*LFQGRK
Trigger: TTTCCTCCCTTGGAATAATCACTGTATACTTCTCTT...TATTGTATTTATAAAGGGAAAAACCTCTGGGTGTAATTTGGCTGCCTGGTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAAGGCTTGAAGTTTCATTaGATTAAAAACGTCTTACGA +
Preference number: 4 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKGLKFH*IKNVLR
Trigger: TCGTAAGACGTTTTTAATGCAATGAAACTTCAAGCC...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CCA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTAAAATTCTTTAGACATTaGCCCATTAGGACTTCTGTT +
Preference number: 4 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLKFFRH*PIRTSV
Trigger: AACAGAAGTCCTAATGGGCCAATGTCTAAAGAATTT...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR GCA 90 bp AACAACCAGGCAGCCAAATTACACCCAGAGGTTTTTCCCTTTATAAATACAATATATAGGTTTTCTGGTTaGAGAGAAGATAAATGCCTT +
Preference number: 4 (lower is better)
Translates to: NNQAAKLHPEVFPFINTIYRFSG*REDKCL
Trigger: AAGGCATTTATCTTCTCTGCAACCAGAAAACCTATA...TATTGTATTTATAAAGGGAAAAACCTCTGGGTGTAATTTGGCTGCCTGGTTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS CCA 90 bp AGTGCGGCGCTGGCCCAGGTGTGCCCAGCTCGACTCGCGTCCACCTaGGACCAAGCGGGCCCAAGAAGGCCCGGAGAGCAGGCGAGGGCG +
Preference number: 5 (lower is better)
Translates to: SAALAQVCPARLAST*DQAGPRRPGEQARA
Trigger: CGCCCTCGCCTGCTCTCCGGGCCTTCTTGGGCCCGCTTGGTCCCAGGTGGACGCGAGTCGAGCTGGGCACACCTGGGCCAGCGCCGCACT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580162.1
CDS GCA 90 bp ACGCTCTCACCAATCCCGCAGGTAAGTGCGGCGCTGGCCCAGGTGTaGCCAGCTCGACTCGCGTCCACCTGGGACCAAGCGGGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: TLSPIPQVSAALAQV*PARLASTWDQAGPR
Trigger: TCTTGGGCCCGCTTGGTCCCAGGTGGACGCGAGTCGAGCTGGGCACACCTGGGCCAGCGCCGCACTTACCTGCGGGATTGGTGAGAGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580162.1
CDS GCA 90 bp TGGCTGGCCCGGATGTCAGCCACGCCTGGAAGCAACTTGCAGTGTTaGTCCCTGCCGAGGGGAAGGTCCCGAAAAGGGTGGGCTGACACC +
Preference number: 5 (lower is better)
Translates to: WLARMSATPGSNLQC*SLPRGRSRKGWADT
Trigger: GGTGTCAGCCCACCCTTTTCGGGACCTTCCCCTCGGCAGGGAGCAACACTGCAAGTTGCTTCCAGGCGTGGCTGACATCCGGGCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS GCA 90 bp GTGCCACTTGGCTGGCCCGGATGTCAGCCACGCCTGGAAGCAACTTaGAGTGTTGCTCCCTGCCGAGGGGAAGGTCCCGAAAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: VPLGWPGCQPRLEAT*SVAPCRGEGPEKGG
Trigger: CCCACCCTTTTCGGGACCTTCCCCTCGGCAGGGAGCAACACTGCAAGTTGCTTCCAGGCGTGGCTGACATCCGGGCCAGCCAAGTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CCA 90 bp GCTCCCTGCCGAGGGGAAGGTCCCGAAAAGGGTGGGCTGACACCGTaGACATGGACACTGACTGGTGAAGCACCTGCTGCGCCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: APCRGEGPEKGGLTP*TWTLTGEAPAAPAP
Trigger: TGGAGCAGGCGCAGCAGGTGCTTCACCAGTCAGTGTCCATGTCCACGGTGTCAGCCCACCCTTTTCGGGACCTTCCCCTCGGCAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CCA 90 bp CACAGTCCAACGTGCCACTTGGCTGGCCCGGATGTCAGCCACGCCTaGAAGCAACTTGCAGTGTTGCTCCCTGCCGAGGGGAAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: HSPTCHLAGPDVSHA*KQLAVLLPAEGKVP
Trigger: CGGGACCTTCCCCTCGGCAGGGAGCAACACTGCAAGTTGCTTCCAGGCGTGGCTGACATCCGGGCCAGCCAAGTGGCACGTTGGACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS GCA 90 bp CCCGGATGTCAGCCACGCCTGGAAGCAACTTGCAGTGTTGCTCCCTaGCGAGGGGAAGGTCCCGAAAAGGGTGGGCTGACACCGTGGACA +
Preference number: 5 (lower is better)
Translates to: PGCQPRLEATCSVAP*RGEGPEKGGLTPWT
Trigger: TGTCCACGGTGTCAGCCCACCCTTTTCGGGACCTTCCCCTCGGCAGGGAGCAACACTGCAAGTTGCTTCCAGGCGTGGCTGACATCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS GCA 90 bp AATTTGCGACCTCGCGAAAACGCTCTCACCAATCCCGCAGGTAAGTaGGGCGCTGGCCCAGGTGTGCCCAGCTCGACTCGCGTCCACCTG +
Preference number: 5 (lower is better)
Translates to: NLRPRENALTNPAGK*GAGPGVPSSTRVHL
Trigger: CAGGTGGACGCGAGTCGAGCTGGGCACACCTGGGCCAGCGCCGCACTTACCTGCGGGATTGGTGAGAGCGTTTTCGCGAGGTCGCAAATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580162.1
CDS-3UTR CAA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGAAGCAACTTGCAGTGTaGCTCCCTGCCGAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVEKQLAV*LPAEGK
Trigger: CTTCCCCTCGGCAGGGAGCAACACTGCAAGTTGCTT...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGCTTTTCCTCTTCAGCTaGCTCCAAGCGTCCGTCCTG +
Preference number: 5 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVELFLFS*LQASVL
Trigger: CAGGACGGACGCTTGGAGCAAGCTGAAGAGGAAAAG...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CCA 90 bp GGCCTCCCGCTGAGAACAGGCTTCCCACCAAGTCTAGGAGGCCAATaGATTAACCACATCAGTGCTGCCTCCTCAGGGTGCTCTCCACCC +
Preference number: 5 (lower is better)
Translates to: GLPLRTGFPPSLGGQ*INHISAASSGCSPP
Trigger: GGGTGGAGAGCACCCTGAGGAGGCAGCACTGATGTGGTTAATCCATTGGCCTCCTAGACTTGGTGGGAAGCCTGTTCTCAGCGGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578677.1
CDS TCA 90 bp TCCCGAAAAGGGTGGGCTGACACCGTGGACATGGACACTGACTGGTaGAGCACCTGCTGCGCCTGCTCCACCGAGTATTCCAAACCTCTG +
Preference number: 5 (lower is better)
Translates to: SRKGWADTVDMDTDW*STCCACSTEYSKPL
Trigger: CAGAGGTTTGGAATACTCGGTGGAGCAGGCGCAGCAGGTGCTTCACCAGTCAGTGTCCATGTCCACGGTGTCAGCCCACCCTTTTCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400105.6
CDS GCA 90 bp TCGTTCCCTGGGAAGGATTCCCCCAAATCTTGGCTACTTCCTGCCTaGCAGCTTGCTCCCTGGCAGCGAAGTCCCAGTAGCTCACCCATG +
Preference number: 5 (lower is better)
Translates to: SFPGKDSPKSWLLPA*QLAPWQRSPSSSPM
Trigger: CATGGGTGAGCTACTGGGACTTCGCTGCCAGGGAGCAAGCTGGCAGGCAGGAAGTAGCCAAGATTTGGGGGAATCCTTCCCAGGGAACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581231.5
CDS TCA 90 bp TCCCGAAAAGGGTGGGCTGACACCGTGGACATGGACACTGACTGGTaGAGCACCTGCTGCGCCTGCTCCACCGAGTATTCTCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: SRKGWADTVDMDTDW*STCCACSTEYSLKR
Trigger: TCTCTTCAGAGAATACTCGGTGGAGCAGGCGCAGCAGGTGCTTCACCAGTCAGTGTCCATGTCCACGGTGTCAGCCCACCCTTTTCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317931.12
CDS CCA 90 bp GTACAAACTCAGCCACCTCATCCACAGTCCAACGTGCCACTTGGCTaGCCCGGATGTCAGCCACGCCTGGAAGCAACTTGCAGTGTTGCT +
Preference number: 5 (lower is better)
Translates to: VQTQPPHPQSNVPLG*PGCQPRLEATCSVA
Trigger: AGCAACACTGCAAGTTGCTTCCAGGCGTGGCTGACATCCGGGCCAGCCAAGTGGCACGTTGGACTGTGGATGAGGTGGCTGAGTTTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CCA 90 bp GACTGTACAAACTCAGCCACCTCATCCACAGTCCAACGTGCCACTTaGCTGGCCCGGATGTCAGCCACGCCTGGAAGCAACTTGCAGTGT +
Preference number: 5 (lower is better)
Translates to: DCTNSATSSTVQRAT*LARMSATPGSNLQC
Trigger: ACACTGCAAGTTGCTTCCAGGCGTGGCTGACATCCGGGCCAGCCAAGTGGCACGTTGGACTGTGGATGAGGTGGCTGAGTTTGTACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CCA 90 bp CGTCCTTCTCTGTATTCGTTCCCTGGGAAGGATTCCCCCAAATCTTaGCTACTTCCTGCCTGCCAGCTTGCTCCCTGGCAGCGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: RPSLYSFPGKDSPKS*LLPACQLAPWQRSP
Trigger: GGGACTTCGCTGCCAGGGAGCAAGCTGGCAGGCAGGAAGTAGCCAAGATTTGGGGGAATCCTTCCCAGGGAACGAATACAGAGAAGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581231.5
CDS TCA 90 bp CGGATATGGCCTATTCCTCGGCACCCGGGAGTAGGACAGACAGCTTaGCCTGGAAGGATCTTCAGGTCATTCGTTCGCTGTGGCACTTCC +
Preference number: 5 (lower is better)
Translates to: RIWPIPRHPGVGQTA*PGRIFRSFVRCGTS
Trigger: GGAAGTGCCACAGCGAACGAATGACCTGAAGATCCTTCCAGGTCAAGCTGTCTGTCCTACTCCCGGGTGCCGAGGAATAGGCCATATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS CCA 90 bp ATGGCCTATTCCTCGGCACCCGGGAGTAGGACAGACAGCTTGACCTaGAAGGATCTTCAGGTCATTCGTTCGCTGTGGCACTTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: MAYSSAPGSRTDSLT*KDLQVIRSLWHFQW
Trigger: CCACTGGAAGTGCCACAGCGAACGAATGACCTGAAGATCCTTCCAGGTCAAGCTGTCTGTCCTACTCCCGGGTGCCGAGGAATAGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS-3UTR CAA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCCCACCCCCGCACTCCTaGGCAGTGGTTTTATGGTCT +
Preference number: 5 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLPPPHS*AVVLWS
Trigger: AGACCATAAAACCACTGCCAAGGAGTGCGGGGGTGG...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS TCA 90 bp TCTTCAGGTCATTCGTTCGCTGTGGCACTTCCAGTGGATGCCCTGTaGCATCACACCATCCGATCGGGTGGATATCAGGGCTGTCTGCCT +
Preference number: 5 (lower is better)
Translates to: SSGHSFAVALPVDAL*HHTIRSGGYQGCLP
Trigger: AGGCAGACAGCCCTGATATCCACCCGATCGGATGGTGTGATGTCACAGGGCATCCACTGGAAGTGCCACAGCGAACGAATGACCTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS GCA 90 bp CTAGGAGGCCAATGGATTAACCACATCAGTGCTGCCTCCTCAGGGTaGTCTCCACCCTGGCCCACAGAGAATGTCTTCACACAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: LGGQWINHISAASSG*SPPWPTENVFTQSS
Trigger: AGAGCTCTGTGTGAAGACATTCTCTGTGGGCCAGGGTGGAGAGCACCCTGAGGAGGCAGCACTGATGTGGTTAATCCATTGGCCTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578677.1
CDS CCA 90 bp GTGCAGCCGCTGAAGGGACGTGACTCAAAGGGGTTGTGCTATCCTTaGGCTTCTTTTCCTCTTCAGCTTGCTCCAAGCGTCCGTCCTGAT +
Preference number: 5 (lower is better)
Translates to: VQPLKGRDSKGLCYP*ASFPLQLAPSVRPD
Trigger: ATCAGGACGGACGCTTGGAGCAAGCTGAAGAGGAAAAGAAGCCCAAGGATAGCACAACCCCTTTGAGTCACGTCCCTTCAGCGGCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
ENST00000581231.5
ENST00000583054.5
ENST00000583809.5
CDS-3UTR CAA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGAACGATCGTGAAGTGTaGCCTCCTTTTTCAAGTTCA +
Preference number: 5 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVENDREV*PPFSSS
Trigger: TGAACTTGAAAAAGGAGGCAACACTTCACGATCGTT...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CCA 90 bp GAAGGCCTAAGCTACTTAGCCAGTGTGTCCTTCCTAGAAAATGAGTaGCCTCCCGCTGAGAACAGGCTTCCCACCAAGTCTAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: EGLSYLASVSFLENE*PPAENRLPTKSRRP
Trigger: TGGCCTCCTAGACTTGGTGGGAAGCCTGTTCTCAGCGGGAGGCCACTCATTTTCTAGGAAGGACACACTGGCTAAGTAGCTTAGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578677.1
CDS-3UTR CAA 90 bp AGCAGCCACACCAGTGTTAGGACAGGGTCCCCTGAGGCCCCGCTGATGGTGGAGCTTCAAGTTTCATATTaGGCAGAAAACCATGAGGCA +
Preference number: 5 (lower is better)
Translates to: SSHTSVRTGSPEAPLMVELQVSY*AENHEA
Trigger: TGCCTCATGGTTTTCTGCCAAATATGAAACTTGAAG...CTCCACCATCAGCGGGGCCTCAGGGGACCCTGTCCTAACACTGGTGTGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp CAGCCCCAGCACGGCTTCATGGGGAATGGCAGAGGAACAAGAGATGAAGGGCAAAGTAGGACAGACAGCTaGACCTGGAAGGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: QPQHGFMGNGRGTRDEGQSRTDS*TWKDLQ
Trigger: CTGAAGATCCTTCCAGGTCAAGCTGTCTGTCCTACT...TTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCATGAAGCCGTGCTGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGCGGGGTTTCACTGCGTaGGCCAGGATGGTCTTGATC +
Preference number: 5 (lower is better)
Translates to: GQMESAVSHLCVPICSHLRGFTA*ARMVLI
Trigger: GATCAAGACCATCCTGGCCAACGCAGTGAAACCCCG...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCATCATTCACATGTTTGTaGGACAGTTGTTGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPSFTCL*DSCWLS
Trigger: GCTCAGCCAACAACTGTCCAACAAACATGTGAATGA...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCGGGGTTGTGCTATCCTaGGGCTTCTTTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLGVVLS*GFFSSS
Trigger: TGAAGAGGAAAAGAAGCCCAAGGATAGCACAACCCC...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCAAACGATCGTGAAGTGTaGCCTCCTTTTTCAAGTTCA +
Preference number: 5 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPNDREV*PPFSSS
Trigger: TGAACTTGAAAAAGGAGGCAACACTTCACGATCGTT...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCAGGCTCCAGGAAAGCTaGGGAGCACAACCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLRLQES*GAQPRN
Trigger: ATTTCTTGGTTGTGCTCCCAAGCTTTCCTGGAGCCT...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp CCCAGGCTGGTGATGTACAGTGGCACGATCTCAGCTCACTGCCTCCACCTCCCACAGGACAGGAAATATTaGAGTATGGGAACAGCTTAC +
Preference number: 5 (lower is better)
Translates to: PRLVMYSGTISAHCLHLPQDRKY*SMGTAY
Trigger: GTAAGCTGTTCCCATACTCAAATATTTCCTGTCCTG...TGGGAGGTGGAGGCAGTGAGCTGAGATCGTGCCACTGTACATCACCAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS TCA 90 bp CCAGAGGAAGTTCAGGGAGCCCATTCATCCCCTGACTTCTTGGCCTaGGGCAATATCTTCTTCAGGGAGTTCCTGGGAATGCCTGAACAT +
Preference number: 5 (lower is better)
Translates to: PEEVQGAHSSPDFLA*GNIFFREFLGMPEH
Trigger: ATGTTCAGGCATTCCCAGGAACTCCCTGAAGAAGATATTGCCTCAGGCCAAGAAGTCAGGGGATGAATGGGCTCCCTGAACTTCCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCACCACCCCCGCACTCCTaGGCAGTGGTTTTATGGTCT +
Preference number: 5 (lower is better)
Translates to: AHSPRCNITQLLITGVLAPPPHS*AVVLWS
Trigger: AGACCATAAAACCACTGCCAAGGAGTGCGGGGGTGG...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACACGCCTGGAAGCAACTaGCAGTGTTGCTCCCTGCCG +
Preference number: 5 (lower is better)
Translates to: IRAERIPPKITMFVNQTHTPGSN*QCCSLP
Trigger: CGGCAGGGAGCAACACTGCAAGTTGCTTCCAGGCGT...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCAAGTCCAACGTGCCACTaGGCTGGCCCGGATGTCAGC +
Preference number: 5 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPSPTCH*AGPDVS
Trigger: GCTGACATCCGGGCCAGCCAAGTGGCACGTTGGACT...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCTGTGCTCCACTTTTATaGCTGAAAGAGCGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLCAPLL*LKERRS
Trigger: AGACCTGCGCTCTTTCAGCAATAAAAGTGGAGCACA...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp GTGCCGCTCCATGTGTTAAGAACTGCTCGTCAGATTTTATTGCTAAAGGACACGAGAGAGGACATGGCCTaGGCTGGGATGACCAGGGCA +
Preference number: 5 (lower is better)
Translates to: VPLHVLRTARQILLLKDTREDMA*AGMTRA
Trigger: TGCCCTGGTCATCCCAGCCAAGGCCATGTCCTCTCT...CGTGTCCTTTAGCAATAAAATCTGACGAGCAGTTCTTAACACATGGAGCGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS GCA 90 bp TGGCCCACAGAGAATGTCTTCACACAGAGCTCTTTCACCTGGCCTTaGCCACTGAATGAGAAAAACACGCTGCACCTGCTCTCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: WPTENVFTQSSFTWP*PLNEKNTLHLLSKA
Trigger: AGCTTTTGAGAGCAGGTGCAGCGTGTTTTTCTCATTCAGTGGGCAAGGCCAGGTGAAAGAGCTCTGTGTGAAGACATTCTCTGTGGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578677.1
CDS-3UTR CAA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCACTTTTCCTCTTCAGCTaGCTCCAAGCGTCCGTCCTG +
Preference number: 5 (lower is better)
Translates to: AHSPRCNITQLLITGVLALFLFS*LQASVL
Trigger: CAGGACGGACGCTTGGAGCAAGCTGAAGAGGAAAAG...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGGGGGTTGTGCTATCCTaGGGCTTCTTTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: GQMESAVSHLCVPICSHLGVVLS*GFFSSS
Trigger: TGAAGAGGAAAAGAAGCCCAAGGATAGCACAACCCC...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp CAGCCCCAGCACGGCTTCATGGGGAATGGCAGAGGAACAAGAGATGAAGGGCAAATGTGCAGTTCATGTTaGGTCTTTTCACACCATCCT +
Preference number: 5 (lower is better)
Translates to: QPQHGFMGNGRGTRDEGQMCSSC*VFSHHP
Trigger: AGGATGGTGTGAAAAGACCAAACATGAACTGCACAT...TTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCATGAAGCCGTGCTGGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS GCA 90 bp ATGCTCTGGAAAGGACTGATCCTTGGAAAACAGCTCAACAGGTGCTaGGACAGCCTTCTGTTCTTTCAAGTACCACTCCCAAGACCATGC +
Preference number: 5 (lower is better)
Translates to: MLWKGLILGKQLNRC*DSLLFFQVPLPRPC
Trigger: GCATGGTCTTGGGAGTGGTACTTGAAAGAACAGAAGGCTGTCGCAGCACCTGTTGAGCTGTTTTCCAAGGATCAGTCCTTTCCAGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
ENST00000581231.5
ENST00000583054.5
ENST00000583809.5
CDS-3UTR CAA 90 bp CAGCCCCAGCACGGCTTCATGGGGAATGGCAGAGGAACAAGAGATGAAGGGCAACTTCAAGTTTCATATTaGGCAGAAAACCATGAGGCA +
Preference number: 5 (lower is better)
Translates to: QPQHGFMGNGRGTRDEGQLQVSY*AENHEA
Trigger: TGCCTCATGGTTTTCTGCCAAATATGAAACTTGAAG...TTGCCCTTCATCTCTTGTTCCTCTGCCATTCCCCATGAAGCCGTGCTGGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp CCAGCTTTTGGAAGTGCCCACCTGACCGTCCTCTCATTACTCCTGGCTACTCTCCAAATTTGCCTGTGTTaGTTCTCTCAAACGATCGTG +
Preference number: 5 (lower is better)
Translates to: PAFGSAHLTVLSLLLATLQICLC*FSQTIV
Trigger: CACGATCGTTTGAGAGAACAAACACAGGCAAATTTG...GAGAGTAGCCAGGAGTAATGAGAGGACGGTCAGGTGGGCACTTCCAAAAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCAAGCAACTTGCAGTGTaGCTCCCTGCCGAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: LSCKQIRAERIPPKITMFKQLAV*LPAEGK
Trigger: CTTCCCCTCGGCAGGGAGCAACACTGCAAGTTGCTT...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTAGTCCAACGTGCCACTaGGCTGGCCCGGATGTCAGC +
Preference number: 5 (lower is better)
Translates to: STQKSHMKSFESTRPLALSPTCH*AGPDVS
Trigger: GCTGACATCCGGGCCAGCCAAGTGGCACGTTGGACT...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTCTTTCTTAAAGCACTaGGCATGCTCTTCACAGCCC +
Preference number: 5 (lower is better)
Translates to: PHPQMVSLHFWESICSCYSFLKH*ACSSQP
Trigger: GGGCTGTGAAGAGCATGCCAAGTGCTTTAAGAAAGA...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACGAAAGAGCGCAGGTCTaGGTGCCAGAGGAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: IRAERIPPKITMFVNQTHERAQV*VPEEVQ
Trigger: CTGAACTTCCTCTGGCACCAAGACCTGCGCTCTTTC...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTGTGCTCCACTTTTATaGCTGAAAGAGCGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: PHPQMVSLHFWESICSCYCAPLL*LKERRS
Trigger: AGACCTGCGCTCTTTCAGCAATAAAAGTGGAGCACA...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCCCTGGCTACTCTCCTTaGTGGAGGCTCCAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: LSCKQIRAERIPPKITMFPGYSP*WRLQES
Trigger: GCTTTCCTGGAGCCTCCACAAAGGAGAGTAGCCAGG...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGGGCTCATTCACATGTTaGTTGGACAGTTGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GQMESAVSHLCVPICSHLGSFTC*LDSCWL
Trigger: CAGCCAACAACTGTCCAACAAACATGTGAATGAGCC...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCAGGGGTTGTGCTATCCTaGGGCTTCTTTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: AHSPRCNITQLLITGVLAGVVLS*GFFSSS
Trigger: TGAAGAGGAAAAGAAGCCCAAGGATAGCACAACCCC...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACCGTGACTCAAAGGGGTaGTGCTATCCTTGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: IRAERIPPKITMFVNQTHRDSKG*CYPWAS
Trigger: AGAAGCCCAAGGATAGCACAACCCCTTTGAGTCACG...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGCCTGGCTACTCTCCTTaGTGGAGGCTCCAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKPGYSP*WRLQES
Trigger: GCTTTCCTGGAGCCTCCACAAAGGAGAGTAGCCAGG...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGCCACCCCCGCACTCCTaGGCAGTGGTTTTATGGTCT +
Preference number: 5 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLPPPHS*AVVLWS
Trigger: AGACCATAAAACCACTGCCAAGGAGTGCGGGGGTGG...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACAGCTTCCTTTTCCTGTaGGGCTGTTTCATTGCCACC +
Preference number: 5 (lower is better)
Translates to: IRAERIPPKITMFVNQTHSFLFL*GCFIAT
Trigger: GGTGGCAATGAAACAGCCCAACAGGAAAAGGAAGCT...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp CCCCACCCACAAATGGTGTCCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACAACGATCGTGAAGTGTaGCCTCCTTTTTCAAGTTCA +
Preference number: 5 (lower is better)
Translates to: PHPQMVSLHFWESICSCYNDREV*PPFSSS
Trigger: TGAACTTGAAAAAGGAGGCAACACTTCACGATCGTT...GTAACAGCTACAAATACTCTCCCAGAAGTGGAGGGACACCATTTGTGGGTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGACGCCTGGAAGCAACTaGCAGTGTTGCTCCCTGCCG +
Preference number: 5 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQTPGSN*QCCSLP
Trigger: CGGCAGGGAGCAACACTGCAAGTTGCTTCCAGGCGT...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCATCTTTCTTAAAGCACTaGGCATGCTCTTCACAGCCC +
Preference number: 5 (lower is better)
Translates to: AHSPRCNITQLLITGVLASFLKH*ACSSQP
Trigger: GGGCTGTGAAGAGCATGCCAAGTGCTTTAAGAAAGA...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTGAAAGAGCGCAGGTCTaGGTGCCAGAGGAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLERAQV*VPEEVQ
Trigger: CTGAACTTCCTCTGGCACCAAGACCTGCGCTCTTTC...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGCTGAACATTTATAAGTaGCGAGGTGGGACCATTCTT +
Preference number: 5 (lower is better)
Translates to: GQMESAVSHLCVPICSHLLNIYK*RGGTIL
Trigger: AAGAATGGTCCCACCTCGCAACTTATAAATGTTCAG...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS TCA 90 bp TCTCAAACGATCGTGAAGTGTTGCCTCCTTTTTCAAGTTCATGTCTaGATACGGGCAGCCAAAAGCACTGTGATGTCCCGAATAACGTGG +
Preference number: 5 (lower is better)
Translates to: SQTIVKCCLLFQVHV*IRAAKSTVMSRITW
Trigger: CCACGTTATTCGGGACATCACAGTGCTTTTGGCTGCCCGTATTCAGACATGAACTTGAAAAAGGAGGCAACACTTCACGATCGTTTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS GCA 90 bp CTTCTTCCTGCACTCTTGGACAAAGCCATGGGGAAATGGAGGATCTaGCTCCTGGAAAACCCTAAGTCTTCTCTCATAATTCCCATAAAG +
Preference number: 5 (lower is better)
Translates to: LLPALLDKAMGKWRI*LLENPKSSLIIPIK
Trigger: CTTTATGGGAATTATGAGAGAAGACTTAGGGTTTTCCAGGAGGCAGATCCTCCATTTCCCCATGGCTTTGTCCAAGAGTGCAGGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583054.5
CDS-3UTR CAA 90 bp AGGACACGAGGAAACTGTTTAACAATGTATGTGGTATGCCATCACTTGTGTAAATGTTGGGCTGTTTCATaGCCACCCCCGCACTCCTTG +
Preference number: 5 (lower is better)
Translates to: RTRGNCLTMYVVCHHLCKCWAVS*PPPHSL
Trigger: CAAGGAGTGCGGGGGTGGCAATGAAACAGCCCAACA...TTTACACAAGTGATGGCATACCACATACATTGTTAAACAGTTTCCTCGTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGCTTTTCCTCTTCAGCTaGCTCCAAGCGTCCGTCCTG +
Preference number: 5 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLLFLFS*LQASVL
Trigger: CAGGACGGACGCTTGGAGCAAGCTGAAGAGGAAAAG...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCAAGGAACTGCATTGGTTaGAGTAGCTTCCAGGTATTC +
Preference number: 5 (lower is better)
Translates to: AHSPRCNITQLLITGVLARNCIG*SSFQVF
Trigger: GAATACCTGGAAGCTACTCAAACCAATGCAGTTCCT...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCAGTAGGACAGACAGCTaGACCTGGAAGGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: LSCKQIRAERIPPKITMFSRTDS*TWKDLQ
Trigger: CTGAAGATCCTTCCAGGTCAAGCTGTCTGTCCTACT...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp GGGCAAATGGAAAGTGCTGTCTCACACCTCTGTGTGCCTATCTGCAGTCATCTGCCTGCATTGTGTGGTTaGTACCCATTAAAAGGAATT +
Preference number: 5 (lower is better)
Translates to: GQMESAVSHLCVPICSHLPALCG*YPLKGI
Trigger: AATTCCTTTTAATGGGTACAAACCACACAATGCAGG...CAGATGACTGCAGATAGGCACACAGAGGTGTGAGACAGCACTTTCCATTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGTGTTGGGCTGTTTCATaGCCACCCCCGCACTCCTTG +
Preference number: 5 (lower is better)
Translates to: EHCFSNISPLESVMLVRWCWAVS*PPPHSL
Trigger: CAAGGAGTGCGGGGGTGGCAATGAAACAGCCCAACA...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCAGCTTCCTTTTCCTGTaGGGCTGTTTCATTGCCACC +
Preference number: 5 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFSFLFL*GCFIAT
Trigger: GGTGGCAATGAAACAGCCCAACAGGAAAAGGAAGCT...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAGTAGGACAGACAGCTaGACCTGGAAGGATCTTCAG +
Preference number: 5 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKSRTDS*TWKDLQ
Trigger: CTGAAGATCCTTCCAGGTCAAGCTGTCTGTCCTACT...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTAGAAGCAGGAAGGCTTaGCCATCGATCTGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLRSRKA*PSICSF
Trigger: GAAAGAGCAGATCGATGGCAAAGCCTTCCTGCTTCT...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCAGAAGCAGGAAGGCTTaGCCATCGATCTGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFRSRKA*PSICSF
Trigger: GAAAGAGCAGATCGATGGCAAAGCCTTCCTGCTTCT...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCAAGTGCTGGGCCCAGTTaGATCTTCATCACTTTGACA +
Preference number: 5 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPSAGPS*IFITLT
Trigger: TGTCAAAGTGATGAAGATCAAACTGGGCCCAGCACT...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACGATGTGTGGGCTTCTTaGGTCTGTCTTGCAAACAAA +
Preference number: 5 (lower is better)
Translates to: IRAERIPPKITMFVNQTHDVWAS*VCLANK
Trigger: TTTGTTTGCAAGACAGACCAAAGAAGCCCACACATC...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp AAAATGGTTTCTTTTCTGGTGACGGAGAAGAATAAAGGTGGATGTGTGGGCTTCAGGCTCCAGGAAAGCTaGGGAGCACAACCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: KMVSFLVTEKNKGGCVGFRLQES*GAQPRN
Trigger: ATTTCTTGGTTGTGCTCCCAAGCTTTCCTGGAGCCT...GAAGCCCACACATCCACCTTTATTCTTCTCCGTCACCAGAAAAGAAACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CCA 90 bp ATCTTAGATCTTCTTCCTGCACTCTTGGACAAAGCCATGGGGAAATaGAGGATCTGCCTCCTGGAAAACCCTAAGTCTTCTCTCATAATT +
Preference number: 5 (lower is better)
Translates to: ILDLLPALLDKAMGK*RICLLENPKSSLII
Trigger: AATTATGAGAGAAGACTTAGGGTTTTCCAGGAGGCAGATCCTCCATTTCCCCATGGCTTTGTCCAAGAGTGCAGGAAGAAGATCTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583054.5
CDS-3UTR CAA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGAGCTTCCTTTTCCTGTaGGGCTGTTTCATTGCCACC +
Preference number: 5 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLSFLFL*GCFIAT
Trigger: GGTGGCAATGAAACAGCCCAACAGGAAAAGGAAGCT...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTACGTGACTCAAAGGGGTaGTGCTATCCTTGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLRDSKG*CYPWAS
Trigger: AGAAGCCCAAGGATAGCACAACCCCTTTGAGTCACG...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp TTTCAACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTTGGATTGGGATAACCTaGGGGTGCTATCAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: FQHCGTDSTQLKPPIQSLWIGIT*GCYQSS
Trigger: AGAACTCTGATAGCACCCCAAGGTTATCCCAATCCA...AAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCACTTCAAGTTTCATATTaGGCAGAAAACCATGAGGCA +
Preference number: 5 (lower is better)
Translates to: AHSPRCNITQLLITGVLALQVSY*AENHEA
Trigger: TGCCTCATGGTTTTCTGCCAAATATGAAACTTGAAG...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACCAAATTTGCCTGTGTTaGTTCTCTCAAACGATCGTG +
Preference number: 5 (lower is better)
Translates to: IRAERIPPKITMFVNQTHQICLC*FSQTIV
Trigger: CACGATCGTTTGAGAGAACAAACACAGGCAAATTTG...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS TCA 90 bp GAGTCTGATTCCAAATTTGCCTGTGTTTGTTCTCTCAAACGATCGTaGAGTGTTGCCTCCTTTTTCAAGTTCATGTCTGAATACGGGCAG +
Preference number: 5 (lower is better)
Translates to: ESDSKFACVCSLKRS*SVASFFKFMSEYGQ
Trigger: CTGCCCGTATTCAGACATGAACTTGAAAAAGGAGGCAACACTTCACGATCGTTTGAGAGAACAAACACAGGCAAATTTGGAATCAGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS-3UTR CAA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGCGTGACTCAAAGGGGTaGTGCTATCCTTGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: EHCFSNISPLESVMLVRWRDSKG*CYPWAS
Trigger: AGAAGCCCAAGGATAGCACAACCCCTTTGAGTCACG...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCAATGTGCAGTTCATGTTaGGTCTTTTCACACCATCCT +
Preference number: 5 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPMCSSC*VFSHHP
Trigger: AGGATGGTGTGAAAAGACCAAACATGAACTGCACAT...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTTGGATTGGGATAACCTaGGGGTGCTATCAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: STQKSHMKSFESTRPLALWIGIT*GCYQSS
Trigger: AGAACTCTGATAGCACCCCAAGGTTATCCCAATCCA...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACATGGATTGGGATAACCTaGGGGTGCTATCAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LFSSQADTYRRHFEASFTWIGIT*GCYQSS
Trigger: AGAACTCTGATAGCACCCCAAGGTTATCCCAATCCA...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAGGAACTGCATTGGTTaGAGTAGCTTCCAGGTATTC +
Preference number: 5 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKRNCIG*SSFQVF
Trigger: GAATACCTGGAAGCTACTCAAACCAATGCAGTTCCT...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp GCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTACAGGGGTTCTGGCACTCATTTTAAAAACTTaGGCAGGAACTGCATTGGTT +
Preference number: 5 (lower is better)
Translates to: AHSPRCNITQLLITGVLALILKT*AGTALV
Trigger: AACCAATGCAGTTCCTGCCAAAGTTTTTAAAATGAG...TGCCAGAACCCCTGTAATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp CTGTCTTGCAAACAAATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCTTGATCTTCATCACTTaGACAATGTCCGTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: LSCKQIRAERIPPKITMFLIFIT*TMSVCV
Trigger: GACACAGACGGACATTGTCAAAGTGATGAAGATCAA...GAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGATTTGTTTGCAAGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAAGATGTGTGGGCTTCTTaGGTCTGTCTTGCAAACAAA +
Preference number: 5 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQDVWAS*VCLANK
Trigger: TTTGTTTGCAAGACAGACCAAAGAAGCCCACACATC...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp ATCAGAGCTGAGCGGATCCCACCAAAGATAACAATGTTCGTAAACCAAACCCACAAGCAGGAATTTTACTaGCACATGGCAGTCTACAAA +
Preference number: 5 (lower is better)
Translates to: IRAERIPPKITMFVNQTHKQEFY*HMAVYK
Trigger: TTTGTAGACTGCCATGTGCAAGTAAAATTCCTGCTT...GTGGGTTTGGTTTACGAACATTGTTATCTTTGGTGGGATCCGCTCAGCTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGCCTACAGAAGACACTTaGAAGCCTCCTTTACACAGC +
Preference number: 5 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLPTEDT*KPPLHS
Trigger: GCTGTGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGG...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS GCA 90 bp ACACTCCTGTTACCATTGCCATTACCTCACTTTAAAATAAACTCTTaGCGAAGGCCTAAGCTACTTAGCCAGTGTGTCCTTCCTAGAAAA +
Preference number: 5 (lower is better)
Translates to: TLLLPLPLPHFKINS*RRPKLLSQCVLPRK
Trigger: TTTTCTAGGAAGGACACACTGGCTAAGTAGCTTAGGCCTTCGGCAAGAGTTTATTTTAAAGTGAGGTAATGGCAATGGTAACAGGAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578677.1
CDS-3UTR CAA 90 bp CCCTCCACTTCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGATGTGCAGTTCATGTTaGGTCTTTTCACACCATCCT +
Preference number: 5 (lower is better)
Translates to: PSTSGRVFVAVTTCKSSKMCSSC*VFSHHP
Trigger: AGGATGGTGTGAAAAGACCAAACATGAACTGCACAT...CTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGAAGTGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGAGGAACTGCATTGGTTaGAGTAGCTTCCAGGTATTC +
Preference number: 5 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLRNCIG*SSFQVF
Trigger: GAATACCTGGAAGCTACTCAAACCAATGCAGTTCCT...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGAGTGCTGGGCCCAGTTaGATCTTCATCACTTTGACA +
Preference number: 5 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQSAGPS*IFITLT
Trigger: TGTCAAAGTGATGAAGATCAAACTGGGCCCAGCACT...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp GTGCCGCTCCATGTGTTAAGAACTGCTCGTCAGATTTTATTGCTAAAGGACACGGGCACAAGTACAGTTTaGTTACACAGATATATTGCA +
Preference number: 5 (lower is better)
Translates to: VPLHVLRTARQILLLKDTGTSTV*LHRYIA
Trigger: TGCAATATATCTGTGTAACAAAACTGTACTTGTGCC...CGTGTCCTTTAGCAATAAAATCTGACGAGCAGTTCTTAACACATGGAGCGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTATTTGTTGGACAGTTGTaGGCTGAGCAGAGAGGACAT +
Preference number: 5 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLFVGQL*AEQRGH
Trigger: ATGTCCTCTCTGCTCAGCCAACAACTGTCCAACAAA...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTAATGTTTGTTGGACAGTaGTTGGCTGAGCAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLMFVGQ*LAEQRG
Trigger: TCCTCTCTGCTCAGCCAACAACTGTCCAACAAACAT...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGCAAATTTGCCTGTGTTaGTTCTCTCAAACGATCGTG +
Preference number: 5 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLQICLC*FSQTIV
Trigger: CACGATCGTTTGAGAGAACAAACACAGGCAAATTTG...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp GAGATCTTCCCTTTGAATAGTGTGTCTCCATTTGTAAAGATGCACACAGCCCCATTAGAGATCTTCCCTTaGAATAGTGTGTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: EIFPLNSVSPFVKMHTAPLEIFP*NSVSPF
Trigger: AAATGGAGACACACTATTCAAAGGGAAGATCTCTAA...TGGGGCTGTGTGCATCTTTACAAATGGAGACACACTATTCAAAGGGAAGATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAAAAGCAGGAATTTTACTaGCACATGGCAGTCTACAAA +
Preference number: 5 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQKQEFY*HMAVYK
Trigger: TTTGTAGACTGCCATGTGCAAGTAAAATTCCTGCTT...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp AACAACCAGGCAGCCAAATTACACCCAGAGGTTTTTCCCTTTATAAATACAATAAGGTGGGACCATTCTTaGCCTCTTGAGAAATTCAGG +
Preference number: 5 (lower is better)
Translates to: NNQAAKLHPEVFPFINTIRWDHS*PLEKFR
Trigger: CCTGAATTTCTCAAGAGGCAAAGAATGGTCCCACCT...TATTGTATTTATAAAGGGAAAAACCTCTGGGTGTAATTTGGCTGCCTGGTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTATGTGTTCCTGGGCATTaGGGTTATAGGTTTTCTGGT +
Preference number: 5 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLCVPGH*GYRFSG
Trigger: ACCAGAAAACCTATAACCCAAATGCCCAGGAACACA...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp TCATCTTTCCCTTTACCAAGCTGGTCCATGTTTCCATTTTATAGTTGCTCTCTGACCCCCTTATACCTGTaGAATTTTGCACCAAATGCA +
Preference number: 5 (lower is better)
Translates to: SSFPLPSWSMFPFYSCSLTPLYL*NFAPNA
Trigger: TGCATTTGGTGCAAAATTCAACAGGTATAAGGGGGT...CAGAGAGCAACTATAAAATGGAAACATGGACCAGCTTGGTAAAGGGAAAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp AACACTGTGGGACTGATTCCACACAACTTAAGCCTCCGATACAATCACTTACAACTCATTTTAAAAACTTaGGCAGGAACTGCATTGGTT +
Preference number: 5 (lower is better)
Translates to: NTVGLIPHNLSLRYNHLQLILKT*AGTALV
Trigger: AACCAATGCAGTTCCTGCCAAAGTTTTTAAAATGAG...TTGTAAGTGATTGTATCGGAGGCTTAAGTTGTGTGGAATCAGTCCCACAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp TCCATTTGTAAAGATGCACACAGCCCCAGATGTAATATAACACAGCTCCTTATTTCAGAAAAGAGGTACTaGTCTTTCAACACTGTGGGA +
Preference number: 5 (lower is better)
Translates to: SICKDAHSPRCNITQLLISEKRY*SFNTVG
Trigger: TCCCACAGTGTTGAAAGACAAGTACCTCTTTTCTGA...AATAAGGAGCTGTGTTATATTACATCTGGGGCTGTGTGCATCTTTACAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp TCTGGGAGAGTATTTGTAGCTGTTACTACCTGTAAAAGTAGTAAGAAGTGTCAGTCAGAAAAGAGGTACTaGTCTTTCAACACTGTGGGA +
Preference number: 5 (lower is better)
Translates to: SGRVFVAVTTCKSSKKCQSEKRY*SFNTVG
Trigger: TCCCACAGTGTTGAAAGACAAGTACCTCTTTTCTGA...CTGACACTTCTTACTACTTTTACAGGTAGTAACAGCTACAAATACTCTCCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp TTATTTTCCAGTCAAGCTGACACCTACAGAAGACACTTTGAAGCCTCCTTTACACTCATTTTAAAAACTTaGGCAGGAACTGCATTGGTT +
Preference number: 5 (lower is better)
Translates to: LFSSQADTYRRHFEASFTLILKT*AGTALV
Trigger: AACCAATGCAGTTCCTGCCAAAGTTTTTAAAATGAG...TGTAAAGGAGGCTTCAAAGTGTCTTCTGTAGGTGTCAGCTTGACTGGAAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp GAACACTGCTTTTCTAATATTTCACCACTTGAGAGTGTTATGCTTGTAAGATGGTTGATCTTCATCACTTaGACAATGTCCGTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: EHCFSNISPLESVMLVRWLIFIT*TMSVCV
Trigger: GACACAGACGGACATTGTCAAAGTGATGAAGATCAA...CCATCTTACAAGCATAACACTCTCAAGTGGTGAAATATTAGAAAAGCAGTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp AGTACACAAAAATCTCACATGAAGTCTTTTGAAAGCACCAGGCCTCTAGCTCTTTTAGAGATCTTCCCTTaGAATAGTGTGTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: STQKSHMKSFESTRPLALLEIFP*NSVSPF
Trigger: AAATGGAGACACACTATTCAAAGGGAAGATCTCTAA...AAGAGCTAGAGGCCTGGTGCTTTCAAAAGACTTCATGTGAGATTTTTGTGTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS-3UTR CAA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTATGTTACACAGATATATaGCATAGTGATGAAGCCTGG +
Preference number: 5 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLCYTDI*HSDEAW
Trigger: CCAGGCTTCATCACTATGCAATATATCTGTGTAACA...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS-3UTR CAA 90 bp TTCCATACAGACAATCTTAGGTGGAGGACATCAAGGAAGAAATACGTCCATTTAGTGGTATGCCATCACTaGTGTAAATACACATACACA +
Preference number: 5 (lower is better)
Translates to: FHTDNLRWRTSRKKYVHLVVCHH*CKYTYT
Trigger: TGTGTATGTGTATTTACACAAGTGATGGCATACCAC...TAAATGGACGTATTTCTTCCTTGATGTCCTCCACCTAAGATTGTCTGTATGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400104.7
CDS CCA 72 bp CTGGCCCAGGTGTGCCCAGCTCGACTCGCGTCCACCTaGGACCAAGCGGGCCCAAGAAGGCCCGGAGAGCAG +
Preference number: 6 (lower is better)
Translates to: LAQVCPARLAST*DQAGPRRPGEQ
Trigger: CTGCTCTCCGGGCCTTCTTGGGCCCGCTTGGTCCCAGGTGGACGCGAGTCGAGCTGGGCACACCTGGGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580162.1
CDS GCA 72 bp CCAATCCCGCAGGTAAGTGCGGCGCTGGCCCAGGTGTaGCCAGCTCGACTCGCGTCCACCTGGGACCAAGCG +
Preference number: 6 (lower is better)
Translates to: PIPQVSAALAQV*PARLASTWDQA
Trigger: CGCTTGGTCCCAGGTGGACGCGAGTCGAGCTGGGCACACCTGGGCCAGCGCCGCACTTACCTGCGGGATTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580162.1
CDS GCA 72 bp CCTCGCGAAAACGCTCTCACCAATCCCGCAGGTAAGTaGGGCGCTGGCCCAGGTGTGCCCAGCTCGACTCGC +
Preference number: 6 (lower is better)
Translates to: PRENALTNPAGK*GAGPGVPSSTR
Trigger: GCGAGTCGAGCTGGGCACACCTGGGCCAGCGCCGCACTTACCTGCGGGATTGGTGAGAGCGTTTTCGCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580162.1
CDS GCA 72 bp GGCTGGCCCGGATGTCAGCCACGCCTGGAAGCAACTTaGAGTGTTGCTCCCTGCCGAGGGGAAGGTCCCGAA +
Preference number: 6 (lower is better)
Translates to: GWPGCQPRLEAT*SVAPCRGEGPE
Trigger: TTCGGGACCTTCCCCTCGGCAGGGAGCAACACTGCAAGTTGCTTCCAGGCGTGGCTGACATCCGGGCCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CCA 72 bp ACGTGCCACTTGGCTGGCCCGGATGTCAGCCACGCCTaGAAGCAACTTGCAGTGTTGCTCCCTGCCGAGGGG +
Preference number: 6 (lower is better)
Translates to: TCHLAGPDVSHA*KQLAVLLPAEG
Trigger: CCCCTCGGCAGGGAGCAACACTGCAAGTTGCTTCCAGGCGTGGCTGACATCCGGGCCAGCCAAGTGGCACGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CCA 72 bp GCCCGCCGAGGTCGGGGCTTTCCCATGGGAGGGAGGTaGCTGCGGCGGAATTTTCAGATGCGTCCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: ARRGRGFPMGGR*LRRNFQMRPSL
Trigger: CAGAGAAGGACGCATCTGAAAATTCCGCCGCAGCCACCTCCCTCCCATGGGAAAGCCCCGACCTCGGCGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581231.5
CDS GCA 72 bp CGGATGTCAGCCACGCCTGGAAGCAACTTGCAGTGTTaGTCCCTGCCGAGGGGAAGGTCCCGAAAAGGGTGG +
Preference number: 6 (lower is better)
Translates to: RMSATPGSNLQC*SLPRGRSRKGW
Trigger: CCACCCTTTTCGGGACCTTCCCCTCGGCAGGGAGCAACACTGCAAGTTGCTTCCAGGCGTGGCTGACATCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CCA 72 bp CGAGGGGAAGGTCCCGAAAAGGGTGGGCTGACACCGTaGACATGGACACTGACTGGTGAAGCACCTGCTGCG +
Preference number: 6 (lower is better)
Translates to: RGEGPEKGGLTP*TWTLTGEAPAA
Trigger: CGCAGCAGGTGCTTCACCAGTCAGTGTCCATGTCCACGGTGTCAGCCCACCCTTTTCGGGACCTTCCCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CCA 72 bp CAGCCACCTCATCCACAGTCCAACGTGCCACTTGGCTaGCCCGGATGTCAGCCACGCCTGGAAGCAACTTGC +
Preference number: 6 (lower is better)
Translates to: QPPHPQSNVPLG*PGCQPRLEATC
Trigger: GCAAGTTGCTTCCAGGCGTGGCTGACATCCGGGCCAGCCAAGTGGCACGTTGGACTGTGGATGAGGTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CAA 72 bp CCGGATGTCAGCCACGCCTGGAAGCAACTTGCAGTGTaGCTCCCTGCCGAGGGGAAGGTCCCGAAAAGGGTG +
Preference number: 6 (lower is better)
Translates to: PDVSHAWKQLAV*LPAEGKVPKRV
Trigger: CACCCTTTTCGGGACCTTCCCCTCGGCAGGGAGCAACACTGCAAGTTGCTTCCAGGCGTGGCTGACATCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS GCA 72 bp CTGTACAAACTCAGCCACCTCATCCACAGTCCAACGTaGCACTTGGCTGGCCCGGATGTCAGCCACGCCTGG +
Preference number: 6 (lower is better)
Translates to: LYKLSHLIHSPT*HLAGPDVSHAW
Trigger: CCAGGCGTGGCTGACATCCGGGCCAGCCAAGTGGCACGTTGGACTGTGGATGAGGTGGCTGAGTTTGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CCA 72 bp AACTCAGCCACCTCATCCACAGTCCAACGTGCCACTTaGCTGGCCCGGATGTCAGCCACGCCTGGAAGCAAC +
Preference number: 6 (lower is better)
Translates to: NSATSSTVQRAT*LARMSATPGSN
Trigger: GTTGCTTCCAGGCGTGGCTGACATCCGGGCCAGCCAAGTGGCACGTTGGACTGTGGATGAGGTGGCTGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS GCA 72 bp GGGAAGGATTCCCCCAAATCTTGGCTACTTCCTGCCTaGCAGCTTGCTCCCTGGCAGCGAAGTCCCAGTAGC +
Preference number: 6 (lower is better)
Translates to: GKDSPKSWLLPA*QLAPWQRSPSS
Trigger: GCTACTGGGACTTCGCTGCCAGGGAGCAAGCTGGCAGGCAGGAAGTAGCCAAGATTTGGGGGAATCCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581231.5
CDS CCA 72 bp CGGGCAGCCAAAAGCACTGTGATGTCCCGAATAACGTaGACCACGGATATGGCCTATTCCTCGGCACCCGGG +
Preference number: 6 (lower is better)
Translates to: RAAKSTVMSRIT*TTDMAYSSAPG
Trigger: CCCGGGTGCCGAGGAATAGGCCATATCCGTGGTCCACGTTATTCGGGACATCACAGTGCTTTTGGCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS CAA 72 bp AAACTCAGCCACCTCATCCACAGTCCAACGTGCCACTaGGCTGGCCCGGATGTCAGCCACGCCTGGAAGCAA +
Preference number: 6 (lower is better)
Translates to: KLSHLIHSPTCH*AGPDVSHAWKQ
Trigger: TTGCTTCCAGGCGTGGCTGACATCCGGGCCAGCCAAGTGGCACGTTGGACTGTGGATGAGGTGGCTGAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CAA 90 bp AGACTGTACAAACTCAGCCACCTCATCCACAGTCCAACGTGCCACTaGGCTGGCCCGGATGTCAGCCACGCCTGGAAGCAACTTGCAGTG +
Preference number: 6 (lower is better)
Translates to: RLYKLSHLIHSPTCH*AGPDVSHAWKQLAV
Trigger: CACTGCAAGTTGCTTCCAGGCGTGGCTGACATCCGGGCCAGCCAAGTGGCACGTTGGACTGTGGATGAGGTGGCTGAGTTTGTACAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CAA 90 bp CTGGGAAGGATTCCCCCAAATCTTGGCTACTTCCTGCCTGCCAGCTaGCTCCCTGGCAGCGAAGTCCCAGTAGCTCACCCATGCTTCATC +
Preference number: 6 (lower is better)
Translates to: LGRIPPNLGYFLPAS*LPGSEVPVAHPCFI
Trigger: GATGAAGCATGGGTGAGCTACTGGGACTTCGCTGCCAGGGAGCAAGCTGGCAGGCAGGAAGTAGCCAAGATTTGGGGGAATCCTTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581231.5
CDS CCA 72 bp TCCTCGGCACCCGGGAGTAGGACAGACAGCTTGACCTaGAAGGATCTTCAGGTCATTCGTTCGCTGTGGCAC +
Preference number: 6 (lower is better)
Translates to: SSAPGSRTDSLT*KDLQVIRSLWH
Trigger: GTGCCACAGCGAACGAATGACCTGAAGATCCTTCCAGGTCAAGCTGTCTGTCCTACTCCCGGGTGCCGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS CAA 72 bp GCCTATTCCTCGGCACCCGGGAGTAGGACAGACAGCTaGACCTGGAAGGATCTTCAGGTCATTCGTTCGCTG +
Preference number: 6 (lower is better)
Translates to: AYSSAPGSRTDS*TWKDLQVIRSL
Trigger: CAGCGAACGAATGACCTGAAGATCCTTCCAGGTCAAGCTGTCTGTCCTACTCCCGGGTGCCGAGGAATAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS CAA 90 bp ACGGATATGGCCTATTCCTCGGCACCCGGGAGTAGGACAGACAGCTaGACCTGGAAGGATCTTCAGGTCATTCGTTCGCTGTGGCACTTC +
Preference number: 6 (lower is better)
Translates to: TDMAYSSAPGSRTDS*TWKDLQVIRSLWHF
Trigger: GAAGTGCCACAGCGAACGAATGACCTGAAGATCCTTCCAGGTCAAGCTGTCTGTCCTACTCCCGGGTGCCGAGGAATAGGCCATATCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS TCA 72 bp CCTATTCCTCGGCACCCGGGAGTAGGACAGACAGCTTaGCCTGGAAGGATCTTCAGGTCATTCGTTCGCTGT +
Preference number: 6 (lower is better)
Translates to: PIPRHPGVGQTA*PGRIFRSFVRC
Trigger: ACAGCGAACGAATGACCTGAAGATCCTTCCAGGTCAAGCTGTCTGTCCTACTCCCGGGTGCCGAGGAATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS TCA 72 bp GGTGCCAGAGGAAGTTCAGGGAGCCCATTCATCCCCTaGCTTCTTGGCCTGAGGCAATATCTTCTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: GARGSSGSPFIP*LLGLRQYLLQG
Trigger: TCCCTGAAGAAGATATTGCCTCAGGCCAAGAAGTCAGGGGATGAATGGGCTCCCTGAACTTCCTCTGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS GCA 72 bp GTGCAGCCGCTGAAGGGACGTGACTCAAAGGGGTTGTaGTATCCTTGGGCTTCTTTTCCTCTTCAGCTTGCT +
Preference number: 6 (lower is better)
Translates to: VQPLKGRDSKGL*YPWASFPLQLA
Trigger: AGCAAGCTGAAGAGGAAAAGAAGCCCAAGGATAGCACAACCCCTTTGAGTCACGTCCCTTCAGCGGCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
ENST00000581231.5
ENST00000583054.5
ENST00000583809.5
CDS GCA 72 bp TTCAGGTCATTCGTTCGCTGTGGCACTTCCAGTGGATaGCCTGTGACATCACACCATCCGATCGGGTGGATA +
Preference number: 6 (lower is better)
Translates to: FRSFVRCGTSSG*PVTSHHPIGWI
Trigger: TATCCACCCGATCGGATGGTGTGATGTCACAGGGCATCCACTGGAAGTGCCACAGCGAACGAATGACCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS GCA 72 bp AGGCATAGCATAGCAATCAGTAGCTGTAGCAGCTTGTaGATGTTCCTCAGAAGGCCCCAGAAGCCACCCGAC +
Preference number: 6 (lower is better)
Translates to: RHSIAISSCSSL*MFLRRPQKPPD
Trigger: GTCGGGTGGCTTCTGGGGCCTTCTGAGGAACATGCACAAGCTGCTACAGCTACTGATTGCTATGCTATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400105.6
CDS TCA 72 bp GTTCAGGGAGCCCATTCATCCCCTGACTTCTTGGCCTaGGGCAATATCTTCTTCAGGGAGTTCCTGGGAATG +
Preference number: 6 (lower is better)
Translates to: VQGAHSSPDFLA*GNIFFREFLGM
Trigger: CATTCCCAGGAACTCCCTGAAGAAGATATTGCCTCAGGCCAAGAAGTCAGGGGATGAATGGGCTCCCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS TCA 72 bp CACACAGAGCTCTTTCACCTGGCCTTGCCCACTGAATaGGAAAAACACGCTGCACCTGCTCTCAAAAGCTGG +
Preference number: 6 (lower is better)
Translates to: HTELFHLALPTE*EKHAAPALKSW
Trigger: CCAGCTTTTGAGAGCAGGTGCAGCGTGTTTTTCTCATTCAGTGGGCAAGGCCAGGTGAAAGAGCTCTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578677.1
CDS CCA 72 bp TGTGCTCCACTTTTATTGCTGAAAGAGCGCAGGTCTTaGTGCCAGAGGAAGTTCAGGGAGCCCATTCATCCC +
Preference number: 6 (lower is better)
Translates to: CAPLLLLKERRS*CQRKFREPIHP
Trigger: GGGATGAATGGGCTCCCTGAACTTCCTCTGGCACCAAGACCTGCGCTCTTTCAGCAATAAAAGTGGAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CAA 72 bp ACAAGGCATAGCATAGCAATCAGTAGCTGTAGCAGCTaGTGCATGTTCCTCAGAAGGCCCCAGAAGCCACCC +
Preference number: 6 (lower is better)
Translates to: TRHSIAISSCSS*CMFLRRPQKPP
Trigger: GGGTGGCTTCTGGGGCCTTCTGAGGAACATGCACAAGCTGCTACAGCTACTGATTGCTATGCTATGCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400105.6
CDS GCA 72 bp TGCGCCTGCTCCACCGAGTATTCCAAACCTCTGGGATaGAGCACAAGCACTCTGAAGAGATTATCCAAGTCA +
Preference number: 6 (lower is better)
Translates to: CACSTEYSKPLG*STSTLKRLSKS
Trigger: TGACTTGGATAATCTCTTCAGAGTGCTTGTGCTGCATCCCAGAGGTTTGGAATACTCGGTGGAGCAGGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400105.6
CDS CCA 72 bp CTTCTTCCTGCACTCTTGGACAAAGCCATGGGGAAATaGAGGATCTGCCTCCTGGAAAACCCTAAGTCTTCT +
Preference number: 6 (lower is better)
Translates to: LLPALLDKAMGK*RICLLENPKSS
Trigger: AGAAGACTTAGGGTTTTCCAGGAGGCAGATCCTCCATTTCCCCATGGCTTTGTCCAAGAGTGCAGGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583054.5
CDS GCA 72 bp AAAGGACTGATCCTTGGAAAACAGCTCAACAGGTGCTaGGACAGCCTTCTGTTCTTTCAAGTACCACTCCCA +
Preference number: 6 (lower is better)
Translates to: KGLILGKQLNRC*DSLLFFQVPLP
Trigger: TGGGAGTGGTACTTGAAAGAACAGAAGGCTGTCGCAGCACCTGTTGAGCTGTTTTCCAAGGATCAGTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
ENST00000581231.5
ENST00000583054.5
ENST00000583809.5
CDS CAA 90 bp AGAGTCTCTGTCCCTCAAGCCAAAGTCCTGGGAAAGAGCATCCAATaGACCAATCTTAGATCTTCTTCCTGCACTCTTGGACAAAGCCAT +
Preference number: 6 (lower is better)
Translates to: RVSVPQAKVLGKSIQ*TNLRSSSCTLGQSH
Trigger: ATGGCTTTGTCCAAGAGTGCAGGAAGAAGATCTAAGATTGGTCAATTGGATGCTCTTTCCCAGGACTTTGGCTTGAGGGACAGAGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583054.5
CDS TCA 72 bp ATCGTGAAGTGTTGCCTCCTTTTTCAAGTTCATGTCTaGATACGGGCAGCCAAAAGCACTGTGATGTCCCGA +
Preference number: 6 (lower is better)
Translates to: IVKCCLLFQVHV*IRAAKSTVMSR
Trigger: TCGGGACATCACAGTGCTTTTGGCTGCCCGTATTCAGACATGAACTTGAAAAAGGAGGCAACACTTCACGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS GCA 72 bp GCACTCTTGGACAAAGCCATGGGGAAATGGAGGATCTaGCTCCTGGAAAACCCTAAGTCTTCTCTCATAATT +
Preference number: 6 (lower is better)
Translates to: ALLDKAMGKWRI*LLENPKSSLII
Trigger: AATTATGAGAGAAGACTTAGGGTTTTCCAGGAGGCAGATCCTCCATTTCCCCATGGCTTTGTCCAAGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583054.5
CDS CAA 72 bp TTGACAATGTCCGTCTGTGTCAGAAGCAGGAAGGCTTaGCCATCGATCTGCTCTTTCTTAAAGCACTTGGCA +
Preference number: 6 (lower is better)
Translates to: LTMSVCVRSRKA*PSICSFLKHLA
Trigger: TGCCAAGTGCTTTAAGAAAGAGCAGATCGATGGCAAAGCCTTCCTGCTTCTGACACAGACGGACATTGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317931.12
ENST00000400105.6
CDS CAA 90 bp ACTGTGAAGGCCAAGAAGACAGCCTCACAGACACTCCTGTTACCATaGCCATTACCTCACTTTAAAATAAACTCTTGCCGAAGGCCTAAG +
Preference number: 6 (lower is better)
Translates to: TVKAKKTASQTLLLP*PLPHFKINSCRRPK
Trigger: CTTAGGCCTTCGGCAAGAGTTTATTTTAAAGTGAGGTAATGGCAATGGTAACAGGAGTGTCTGTGAGGCTGTCTTCTTGGCCTTCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578677.1
CDS CCA 72 bp AATGCACTAGTAAGCGATCTTCAACAATATCTGCTATaGTCGCCACACACACCAAGGAAGGGTTCTTCCTGT +
Preference number: 6 (lower is better)
Translates to: NALVSDLQQYLL*SPHTPRKGSSC
Trigger: ACAGGAAGAACCCTTCCTTGGTGTGTGTGGCGACCATAGCAGATATTGTTGAAGATCGCTTACTAGTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS CAA 72 bp GCCAAGAAGACAGCCTCACAGACACTCCTGTTACCATaGCCATTACCTCACTTTAAAATAAACTCTTGCCGA +
Preference number: 6 (lower is better)
Translates to: AKKTASQTLLLP*PLPHFKINSCR
Trigger: TCGGCAAGAGTTTATTTTAAAGTGAGGTAATGGCAATGGTAACAGGAGTGTCTGTGAGGCTGTCTTCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578677.1
CDS CAA 90 bp ATTCCAAATTTGCCTGTGTTTGTTCTCTCAAACGATCGTGAAGTGTaGCCTCCTTTTTCAAGTTCATGTCTGAATACGGGCAGCCAAAAG +
Preference number: 6 (lower is better)
Translates to: IPNLPVFVLSNDREV*PPFSSSCLNTGSQK
Trigger: CTTTTGGCTGCCCGTATTCAGACATGAACTTGAAAAAGGAGGCAACACTTCACGATCGTTTGAGAGAACAAACACAGGCAAATTTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS CAA 90 bp TACAGAGGCTTTTTGATTTTGAATGTGAAGAGTCTGATTCCAAATTaGCCTGTGTTTGTTCTCTCAAACGATCGTGAAGTGTTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: YRGFLILNVKSLIPN*PVFVLSNDREVLPP
Trigger: AGGAGGCAACACTTCACGATCGTTTGAGAGAACAAACACAGGCAAATTTGGAATCAGACTCTTCACATTCAAAATCAAAAAGCCTCTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS TCA 72 bp TCCAAATTTGCCTGTGTTTGTTCTCTCAAACGATCGTaGAGTGTTGCCTCCTTTTTCAAGTTCATGTCTGAA +
Preference number: 6 (lower is better)
Translates to: SKFACVCSLKRS*SVASFFKFMSE
Trigger: TTCAGACATGAACTTGAAAAAGGAGGCAACACTTCACGATCGTTTGAGAGAACAAACACAGGCAAATTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317931.12
ENST00000400104.7
ENST00000400105.6
CDS TCA 72 bp AGTATTCCAAACCTCTGGGATGCAGCACAAGCACTCTaGAGAGATTATCCAAGTCAATATCTTCTTTTCCTT +
Preference number: 6 (lower is better)
Translates to: SIPNLWDAAQAL*RDYPSQYLLFL
Trigger: AAGGAAAAGAAGATATTGACTTGGATAATCTCTTCAGAGTGCTTGTGCTGCATCCCAGAGGTTTGGAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400105.6