Pregenerated sensors for KRTAP5-9 (Homo sapiens)
Ensembl gene IDs: ENSG00000254997Ensembl transcript IDs: ENST00000528743.4
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTCTTGCTTaGCATGAGGGCAGCCCCCAGTGCAGTTTGGCTCAGACATATGGG | + |
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Preference number: 1 (lower is better) Translates to: CLPWNYQEGEFQALA*HEGSPQCSLAQTYG Trigger: CCCATATGTCTGAGCCAAACTGCACTGGGGGCTGCCCTCATGCCAAGCAAGAGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR CCA 90 bp | CTTTTCAGATCCAGAAGGGGATGTGCTTCAAGGGTAGTCACTTGTTaGAAAGCACAGATCTTCAGGAGCTACCTGAGGTTTCCCACTAGA | + |
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Preference number: 1 (lower is better) Translates to: LFRSRRGCASRVVTC*KAQIFRSYLRFPTR Trigger: TCTAGTGGGAAACCTCAGGTAGCTCCTGAAGATCTGTGCTTTCCAACAAGTGACTACCCTTGAAGCACATCCCCTTCTGGATCTGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR GCA 90 bp | CCAGATGCATTTTGGATTTCCATAGATACATGTGATCATTTGGGTTaGAGGACATCCATCTGCAAATGTCGTGAAGCTCCTGGCAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: PDAFWISIDTCDHLG*RTSICKCREAPGRQ Trigger: TTGCCTGCCAGGAGCTTCACGACATTTGCAGATGGATGTCCTGCAACCCAAATGATCACATGTATCTATGGAAATCCAAAATGCATCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR GCA 90 bp | ATTTCCATAGATACATGTGATCATTTGGGTTGCAGGACATCCATCTaGAAATGTCGTGAAGCTCCTGGCAGGCAAAGGAAAGAAGGGTTT | + |
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Preference number: 1 (lower is better) Translates to: ISIDTCDHLGCRTSI*KCREAPGRQRKEGF Trigger: AAACCCTTCTTTCCTTTGCCTGCCAGGAGCTTCACGACATTTGCAGATGGATGTCCTGCAACCCAAATGATCACATGTATCTATGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR CAA 90 bp | TTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTCTaGCTTGGCATGAGGGCAGCCCCCAGTGCAGTTTGGCTCAGACAT | + |
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Preference number: 2 (lower is better) Translates to: FAVSHGIIKKGNSRL*LGMRAAPSAVWLRH Trigger: ATGTCTGAGCCAAACTGCACTGGGGGCTGCCCTCATGCCAAGCAAGAGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR-3UTR TCA 90 bp | CCATGGAATTATCAAGAAGGGGAATTCCAGGCTCTTGCTTGGCATGAGGGCAGCTGGAAAAAGACGCCCTaGGCCAAGGGCTCTTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: PWNYQEGEFQALAWHEGSWKKTP*AKGSFQ Trigger: CTGAAAAGAGCCCTTGGCTCAGGGCGTCTTTTTCCA...GCTGCCCTCATGCCAAGCAAGAGCCTGGAATTCCCCTTCTTGATAATTCCATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR CAA 90 bp | GGCTCTTTTCAGATCCAGAAGGGGATGTGCTTCAAGGGTAGTCACTaGTTGGAAAGCACAGATCTTCAGGAGCTACCTGAGGTTTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: GSFQIQKGMCFKGSH*LESTDLQELPEVSH Trigger: GTGGGAAACCTCAGGTAGCTCCTGAAGATCTGTGCTTTCCAACAAGTGACTACCCTTGAAGCACATCCCCTTCTGGATCTGAAAAGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR-3UTR GCA 90 bp | CAGGCAAAGGAAAGAAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAAGAGGGCAGCCCCCAGTaGAGTTTGGCTCAGACATAT | + |
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Preference number: 2 (lower is better) Translates to: QAKERRVCCLPWNYQEGEEGSPQ*SLAQTY Trigger: ATATGTCTGAGCCAAACTGCACTGGGGGCTGCCCTC...TTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTTCCTTTGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR CAA 90 bp | TCTGCAAATGTCGTGAAGCTCCTGGCAGGCAAAGGAAAGAAGGGTTaGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SANVVKLLAGKGKKG*LSPMELSRRGIPGS Trigger: AGAGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTTCCTTTGCCTGCCAGGAGCTTCACGACATTTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR-3UTR CCA 90 bp | GAAAGAAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTTTTGGCTCAGACATATaGGGGCATGTGGGAAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: ERRVCCLPWNYQEGEFQAFGSDI*GHVGKR Trigger: CCTCTTTCCCACATGCCCCCATATGTCTGAGCCAAA...AGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR CAA 90 bp | CTGCACCCAGATGCATTTTGGATTTCCATAGATACATGTGATCATTaGGGTTGCAGGACATCCATCTGCAAATGTCGTGAAGCTCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LHPDAFWISIDTCDH*GCRTSICKCREAPG Trigger: GCCAGGAGCTTCACGACATTTGCAGATGGATGTCCTGCAACCCAAATGATCACATGTATCTATGGAAATCCAAAATGCATCTGGGTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR-3UTR GCA 90 bp | CAAAGGAAAGAAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCATCCAGAAGGGGATGTaGTTCAAGGGTAGTCACTTG | + |
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Preference number: 2 (lower is better) Translates to: QRKEGFAVSHGIIKKGNSIQKGM*FKGSHL Trigger: CAAGTGACTACCCTTGAAGCACATCCCCTTCTGGAT...GGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTTCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR-3UTR CCA 90 bp | TGGATTTCCATAGATACATGTGATCATTTGGGTTGCAGGACATCCATCTGCAAAGGAATGGGCAGGGAGTaGTTCATTCCATTTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: WISIDTCDHLGCRTSICKGMGRE*FIPFPQ Trigger: CTGAGGAAATGGAATGAACCACTCCCTGCCCATTCC...TTTGCAGATGGATGTCCTGCAACCCAAATGATCACATGTATCTATGGAAATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR-3UTR CCA 90 bp | TGGATTTCCATAGATACATGTGATCATTTGGGTTGCAGGACATCCATCTGCAAAAGGGGCAAAATTGCCTaGGTCTTGGGATATTCTTAT | + |
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Preference number: 2 (lower is better) Translates to: WISIDTCDHLGCRTSICKRGKIA*VLGYSY Trigger: ATAAGAATATCCCAAGACCCAGGCAATTTTGCCCCT...TTTGCAGATGGATGTCCTGCAACCCAAATGATCACATGTATCTATGGAAATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR CCA 72 bp | CTCTTGCTTGGCATGAGGGCAGCCCCCAGTGCAGTTTaGCTCAGACATATGGGGGCATGTGGGAAAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: LLLGMRAAPSAV*LRHMGACGKEG Trigger: CCCCTCTTTCCCACATGCCCCCATATGTCTGAGCCAAACTGCACTGGGGGCTGCCCTCATGCCAAGCAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR-3UTR CAA 90 bp | CTCTTGCTTGGCATGAGGGCAGCCCCCAGTGCAGTTTGGCTCAGACATATGGGGGAAAGAGGGGCAAAATaGCCTGGGTCTTGGGATATT | + |
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Preference number: 3 (lower is better) Translates to: LLLGMRAAPSAVWLRHMGERGAK*PGSWDI Trigger: AATATCCCAAGACCCAGGCAATTTTGCCCCTCTTTC...CCCCATATGTCTGAGCCAAACTGCACTGGGGGCTGCCCTCATGCCAAGCAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR CCA 72 bp | TGGAATTATCAAGAAGGGGAATTCCAGGCTCTTGCTTaGCATGAGGGCAGCCCCCAGTGCAGTTTGGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: WNYQEGEFQALA*HEGSPQCSLAQ Trigger: CTGAGCCAAACTGCACTGGGGGCTGCCCTCATGCCAAGCAAGAGCCTGGAATTCCCCTTCTTGATAATTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR TCA 72 bp | TCATTTGGGTTGCAGGACATCCATCTGCAAATGTCGTaGAGCTCCTGGCAGGCAAAGGAAAGAAGGGTTTGC | + |
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Preference number: 3 (lower is better) Translates to: SFGLQDIHLQMS*SSWQAKERRVC Trigger: GCAAACCCTTCTTTCCTTTGCCTGCCAGGAGCTTCACGACATTTGCAGATGGATGTCCTGCAACCCAAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR CCA 72 bp | TCCAGAAGGGGATGTGCTTCAAGGGTAGTCACTTGTTaGAAAGCACAGATCTTCAGGAGCTACCTGAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: SRRGCASRVVTC*KAQIFRSYLRF Trigger: AAACCTCAGGTAGCTCCTGAAGATCTGTGCTTTCCAACAAGTGACTACCCTTGAAGCACATCCCCTTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR-3UTR CAA 90 bp | TGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTCTTGCTTGGCATAAGGGTAGTCACTTGTaGGAAAGCACAGATCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: CCLPWNYQEGEFQALAWHKGSHL*ESTDLQ Trigger: CTGAAGATCTGTGCTTTCCAACAAGTGACTACCCTT...ATGCCAAGCAAGAGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR GCA 72 bp | GATACATGTGATCATTTGGGTTGCAGGACATCCATCTaGAAATGTCGTGAAGCTCCTGGCAGGCAAAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: DTCDHLGCRTSI*KCREAPGRQRK Trigger: TTTCCTTTGCCTGCCAGGAGCTTCACGACATTTGCAGATGGATGTCCTGCAACCCAAATGATCACATGTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR-3UTR CAA 90 bp | CATGTGATCATTTGGGTTGCAGGACATCCATCTGCAAATGTCGTGAAGCTCCTGAAAATTGCCTGGGTCTaGGGATATTCTTATAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: HVIIWVAGHPSANVVKLLKIAWV*GYSYRE Trigger: TTCCCTATAAGAATATCCCAAGACCCAGGCAATTTT...CAGGAGCTTCACGACATTTGCAGATGGATGTCCTGCAACCCAAATGATCACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR-3UTR CAA 90 bp | CAAAGGAAAGAAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCTTCAAGGGTAGTCACTaGTTGGAAAGCACAGATCTT | + |
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Preference number: 3 (lower is better) Translates to: QRKEGFAVSHGIIKKGNSFKGSH*LESTDL Trigger: AAGATCTGTGCTTTCCAACAAGTGACTACCCTTGAA...GGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTTCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR GCA 72 bp | TTTTGGATTTCCATAGATACATGTGATCATTTGGGTTaGAGGACATCCATCTGCAAATGTCGTGAAGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: FWISIDTCDHLG*RTSICKCREAP Trigger: AGGAGCTTCACGACATTTGCAGATGGATGTCCTGCAACCCAAATGATCACATGTATCTATGGAAATCCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR CAA 72 bp | GCTCTTGCTTGGCATGAGGGCAGCCCCCAGTGCAGTTaGGCTCAGACATATGGGGGCATGTGGGAAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: ALAWHEGSPQCS*AQTYGGMWERG Trigger: CCCTCTTTCCCACATGCCCCCATATGTCTGAGCCAAACTGCACTGGGGGCTGCCCTCATGCCAAGCAAGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR GCA 90 bp | GAATGGGCAGGGAGTGGTTCATTCCATTTCCTCAGGGGCTGGAAAAAGACGCCCGAGGGCAGCCCCCAGTaGAGTTTGGCTCAGACATAT | + |
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Preference number: 4 (lower is better) Translates to: EWAGSGSFHFLRGWKKTPEGSPQ*SLAQTY Trigger: ATATGTCTGAGCCAAACTGCACTGGGGGCTGCCCTC...GGGCGTCTTTTTCCAGCCCCTGAGGAAATGGAATGAACCACTCCCTGCCCATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR TCA 90 bp | GAATGGGCAGGGAGTGGTTCATTCCATTTCCTCAGGGGCTGGAAAAAGACGCCCCATCTGCAAATGTCGTaGAGCTCCTGGCAGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: EWAGSGSFHFLRGWKKTPHLQMS*SSWQAK Trigger: CTTTGCCTGCCAGGAGCTTCACGACATTTGCAGATG...GGGCGTCTTTTTCCAGCCCCTGAGGAAATGGAATGAACCACTCCCTGCCCATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CCA 90 bp | AAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTCTTGCGCCCCCAGTGCAGTTTaGCTCAGACATATGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: KGLLSPMELSRRGIPGSCAPSAV*LRHMGA Trigger: TGCCCCCATATGTCTGAGCCAAACTGCACTGGGGGC...GCAAGAGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CCA 90 bp | TTCAAGGGTAGTCACTTGTTGGAAAGCACAGATCTTCAGGAGCTACCTGAGGTTTTCCAGGCTCTTGCTTaGCATGAGGGCAGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: FKGSHLLESTDLQELPEVFQALA*HEGSPQ Trigger: CTGGGGGCTGCCCTCATGCCAAGCAAGAGCCTGGAA...AACCTCAGGTAGCTCCTGAAGATCTGTGCTTTCCAACAAGTGACTACCCTTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR GCA 90 bp | AGGACATCCATCTGCAAATGTCGTGAAGCTCCTGGCAGGCAAAGGAAAGAAGGGATCCAGAAGGGGATGTaGTTCAAGGGTAGTCACTTG | + |
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Preference number: 4 (lower is better) Translates to: RTSICKCREAPGRQRKEGIQKGM*FKGSHL Trigger: CAAGTGACTACCCTTGAAGCACATCCCCTTCTGGAT...CCCTTCTTTCCTTTGCCTGCCAGGAGCTTCACGACATTTGCAGATGGATGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CCA 90 bp | GAATGGGCAGGGAGTGGTTCATTCCATTTCCTCAGGGGCTGGAAAAAGACGCCCCTGTTACACAGCTCCTaGAGGTATGTCTTGATTGTT | + |
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Preference number: 4 (lower is better) Translates to: EWAGSGSFHFLRGWKKTPLLHSS*RYVLIV Trigger: AACAATCAAGACATACCTCCAGGAGCTGTGTAACAG...GGGCGTCTTTTTCCAGCCCCTGAGGAAATGGAATGAACCACTCCCTGCCCATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR CAA 72 bp | CAGATCCAGAAGGGGATGTGCTTCAAGGGTAGTCACTaGTTGGAAAGCACAGATCTTCAGGAGCTACCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QIQKGMCFKGSH*LESTDLQELPE Trigger: CTCAGGTAGCTCCTGAAGATCTGTGCTTTCCAACAAGTGACTACCCTTGAAGCACATCCCCTTCTGGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR TCA 90 bp | GCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTCTTGCTTGGCATGATGAGCCCTTCCTCCTaGGATGATTTCCTTGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: AVSHGIIKKGNSRLLLGMMSPSS*DDFLVE Trigger: TTCCACAAGGAAATCATCTCAGGAGGAAGGGCTCAT...CATGCCAAGCAAGAGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR GCA 90 bp | ATTTGGGTTGCAGGACATCCATCTGCAAATGTCGTGAAGCTCCTGGCAGGCAAATGCAGGACATCCATCTaGAAATGTCGTGAAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: IWVAGHPSANVVKLLAGKCRTSI*KCREAP Trigger: AGGAGCTTCACGACATTTGCAGATGGATGTCCTGCA...TTTGCCTGCCAGGAGCTTCACGACATTTGCAGATGGATGTCCTGCAACCCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CCA 90 bp | GGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTCTTGCTTTTTGGCTCAGACATATaGGGGCATGTGGGAAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GFAVSHGIIKKGNSRLLLFGSDI*GHVGKR Trigger: CCTCTTTCCCACATGCCCCCATATGTCTGAGCCAAA...AAGCAAGAGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CCA 90 bp | GAATGGGCAGGGAGTGGTTCATTCCATTTCCTCAGGGGCTGGAAAAAGACGCCCATACATGTGATCATTTaGGTTGCAGGACATCCATCT | + |
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Preference number: 4 (lower is better) Translates to: EWAGSGSFHFLRGWKKTPIHVII*VAGHPS Trigger: AGATGGATGTCCTGCAACCCAAATGATCACATGTAT...GGGCGTCTTTTTCCAGCCCCTGAGGAAATGGAATGAACCACTCCCTGCCCATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR CAA 72 bp | ATCCAGAAGGGGATGTGCTTCAAGGGTAGTCACTTGTaGGAAAGCACAGATCTTCAGGAGCTACCTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: IQKGMCFKGSHL*ESTDLQELPEV Trigger: AACCTCAGGTAGCTCCTGAAGATCTGTGCTTTCCAACAAGTGACTACCCTTGAAGCACATCCCCTTCTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR CAA 72 bp | GTCGTGAAGCTCCTGGCAGGCAAAGGAAAGAAGGGTTaGCTGTCTCCCATGGAATTATCAAGAAGGGGAATT | + |
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Preference number: 4 (lower is better) Translates to: VVKLLAGKGKKG*LSPMELSRRGI Trigger: AATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTTCCTTTGCCTGCCAGGAGCTTCACGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR TCA 90 bp | CAGGCAAAGGAAAGAAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCTGGATCCAAGTATaGGCCCTTCCTCCTGAGATG | + |
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Preference number: 4 (lower is better) Translates to: QAKERRVCCLPWNYQEGEFWIQV*ALPPEM Trigger: CATCTCAGGAGGAAGGGCTCATACTTGGATCCAGAA...TTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTTCCTTTGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CCA 90 bp | ATTTGGGTTGCAGGACATCCATCTGCAAATGTCGTGAAGCTCCTGGCAGGCAAAAGGGTAGTCACTTGTTaGAAAGCACAGATCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: IWVAGHPSANVVKLLAGKRVVTC*KAQIFR Trigger: CCTGAAGATCTGTGCTTTCCAACAAGTGACTACCCT...TTTGCCTGCCAGGAGCTTCACGACATTTGCAGATGGATGTCCTGCAACCCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CCA 90 bp | AAAGAAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTCGGAATGGGCAGGGAGTaGTTCATTCCATTTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: KEGFAVSHGIIKKGNSRLGMGRE*FIPFPQ Trigger: CTGAGGAAATGGAATGAACCACTCCCTGCCCATTCC...GAGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CCA 90 bp | AGGACATCCATCTGCAAATGTCGTGAAGCTCCTGGCAGGCAAAGGAAAGAAGGGTATTCTTATAGGGAATaGGCAGGGAGTGGTTCATTC | + |
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Preference number: 4 (lower is better) Translates to: RTSICKCREAPGRQRKEGYSYRE*AGSGSF Trigger: GAATGAACCACTCCCTGCCCATTCCCTATAAGAATA...CCCTTCTTTCCTTTGCCTGCCAGGAGCTTCACGACATTTGCAGATGGATGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR TCA 90 bp | CACCCAGATGCATTTTGGATTTCCATAGATACATGTGATCATTTGGGTTGCAGGTCTTCAGGAGCTACCTaGGGTTTCCCACTAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: HPDAFWISIDTCDHLGCRSSGAT*GFPLEP Trigger: AGGCTCTAGTGGGAAACCTCAGGTAGCTCCTGAAGA...CCTGCAACCCAAATGATCACATGTATCTATGGAAATCCAAAATGCATCTGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR TCA 90 bp | CACCCAGATGCATTTTGGATTTCCATAGATACATGTGATCATTTGGGTTGCAGGTGGAAAAAGACGCCCTaGGCCAAGGGCTCTTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: HPDAFWISIDTCDHLGCRWKKTP*AKGSFQ Trigger: CTGAAAAGAGCCCTTGGCTCAGGGCGTCTTTTTCCA...CCTGCAACCCAAATGATCACATGTATCTATGGAAATCCAAAATGCATCTGGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR GCA 90 bp | GCAAAGGAAAGAAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCGTTTCTCTTTCCGGTTaGTGTTACACAGCTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AKERRVCCLPWNYQEGEFVSLSG*CYTAPG Trigger: TCCAGGAGCTGTGTAACAGCAACCGGAAAGAGAAAC...GAATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTTCCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR GCA 90 bp | TGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTCTTGCTTGGCATTGTGATCATTTGGGTTaGAGGACATCCATCTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: CCLPWNYQEGEFQALAWHCDHLG*RTSICK Trigger: TTTGCAGATGGATGTCCTGCAACCCAAATGATCACA...ATGCCAAGCAAGAGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR GCA 90 bp | CAAAGGAAAGAAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAAGGAAAGAAGGGTTTaGTGTCTCCCATGGAATTAT | + |
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Preference number: 4 (lower is better) Translates to: QRKEGFAVSHGIIKKGNSKERRV*CLPWNY Trigger: ATAATTCCATGGGAGACAGCAAACCCTTCTTTCCTT...GGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTTCCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR TCA 90 bp | TGGATTTCCATAGATACATGTGATCATTTGGGTTGCAGGACATCCATCTGCAAATTCCATAGATACATGTaGTCATTTGGGTTGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: WISIDTCDHLGCRTSICKFHRYM*SFGLQD Trigger: GTCCTGCAACCCAAATGATCACATGTATCTATGGAA...TTTGCAGATGGATGTCCTGCAACCCAAATGATCACATGTATCTATGGAAATCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CCA 90 bp | GCATTTTGGATTTCCATAGATACATGTGATCATTTGGGTTGCAGGACATCCATCAGGGGCAAAATTGCCTaGGTCTTGGGATATTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: AFWISIDTCDHLGCRTSIRGKIA*VLGYSY Trigger: ATAAGAATATCCCAAGACCCAGGCAATTTTGCCCCT...GATGGATGTCCTGCAACCCAAATGATCACATGTATCTATGGAAATCCAAAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| 3UTR CAA 72 bp | GATGCATTTTGGATTTCCATAGATACATGTGATCATTaGGGTTGCAGGACATCCATCTGCAAATGTCGTGAA | + |
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Preference number: 4 (lower is better) Translates to: DAFWISIDTCDH*GCRTSICKCRE Trigger: TTCACGACATTTGCAGATGGATGTCCTGCAACCCAAATGATCACATGTATCTATGGAAATCCAAAATGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CAA 90 bp | GGAAAGAGGGGCAAAATTGCCTGGGTCTTGGGATATTCTTATAGGGAATGGGCAAGCCCCCAGTGCAGTTaGGCTCAGACATATGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: GKRGKIAWVLGYSYREWASPQCS*AQTYGG Trigger: GCCCCCATATGTCTGAGCCAAACTGCACTGGGGGCT...TGCCCATTCCCTATAAGAATATCCCAAGACCCAGGCAATTTTGCCCCTCTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CAA 90 bp | GTTGCAGGACATCCATCTGCAAATGTCGTGAAGCTCCTGGCAGGCAAAGGAAAGTGTTTCTCTTTCCGGTaGCTGTTACACAGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: VAGHPSANVVKLLAGKGKCFSFR*LLHSSW Trigger: CCAGGAGCTGTGTAACAGCAACCGGAAAGAGAAACA...CTTTCCTTTGCCTGCCAGGAGCTTCACGACATTTGCAGATGGATGTCCTGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CAA 90 bp | GCATTTTGGATTTCCATAGATACATGTGATCATTTGGGTTGCAGGACATCCATCGGGAATTCCAGGCTCTaGCTTGGCATGAGGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: AFWISIDTCDHLGCRTSIGNSRL*LGMRAA Trigger: GGCTGCCCTCATGCCAAGCAAGAGCCTGGAATTCCC...GATGGATGTCCTGCAACCCAAATGATCACATGTATCTATGGAAATCCAAAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CAA 90 bp | CCATGGAATTATCAAGAAGGGGAATTCCAGGCTCTTGCTTGGCATGAGGGCAGCTTCAAGGGTAGTCACTaGTTGGAAAGCACAGATCTT | + |
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Preference number: 5 (lower is better) Translates to: PWNYQEGEFQALAWHEGSFKGSH*LESTDL Trigger: AAGATCTGTGCTTTCCAACAAGTGACTACCCTTGAA...GCTGCCCTCATGCCAAGCAAGAGCCTGGAATTCCCCTTCTTGATAATTCCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CAA 90 bp | GGCTCTTTTCAGATCCAGAAGGGGATGTGCTTCAAGGGTAGTCACTTGTTGGAAAAGGGTAGTCACTTGTaGGAAAGCACAGATCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: GSFQIQKGMCFKGSHLLEKGSHL*ESTDLQ Trigger: CTGAAGATCTGTGCTTTCCAACAAGTGACTACCCTT...TTCCAACAAGTGACTACCCTTGAAGCACATCCCCTTCTGGATCTGAAAAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CAA 90 bp | CAGGCAAAGGAAAGAAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAAGAAAGAGGGGCAAAATaGCCTGGGTCTTGGGATATT | + |
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Preference number: 5 (lower is better) Translates to: QAKERRVCCLPWNYQEGEERGAK*PGSWDI Trigger: AATATCCCAAGACCCAGGCAATTTTGCCCCTCTTTC...TTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTTCCTTTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CAA 90 bp | GAAAGAAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTCATAGGAACACACCATaGTTTCTCTTTCCGGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: ERRVCCLPWNYQEGEFQAHRNTP*FLFPVA Trigger: AGCAACCGGAAAGAGAAACAATGGTGTGTTCCTATG...AGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CAA 90 bp | AAAGAAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTCGATACATGTGATCATTaGGGTTGCAGGACATCCATC | + |
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Preference number: 5 (lower is better) Translates to: KEGFAVSHGIIKKGNSRLDTCDH*GCRTSI Trigger: GATGGATGTCCTGCAACCCAAATGATCACATGTATC...GAGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CAA 90 bp | TGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTCTTGCTTGGCATAAAATTGCCTGGGTCTaGGGATATTCTTATAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: CCLPWNYQEGEFQALAWHKIAWV*GYSYRE Trigger: TTCCCTATAAGAATATCCCAAGACCCAGGCAATTTT...ATGCCAAGCAAGAGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CAA 90 bp | CAGGCAAAGGAAAGAAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAAGCACCCAGATGCATTTaGGATTTCCATAGATACATG | + |
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Preference number: 5 (lower is better) Translates to: QAKERRVCCLPWNYQEGEAPRCI*DFHRYM Trigger: CATGTATCTATGGAAATCCAAAATGCATCTGGGTGC...TTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTTCCTTTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CAA 90 bp | GAAAGAAGGGTTTGCTGTCTCCCATGGAATTATCAAGAAGGGGAATTCCAGGCTTCCTGGAGGTATGTCTaGATTGTTTTTCTTTGGCTA | + |
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Preference number: 5 (lower is better) Translates to: ERRVCCLPWNYQEGEFQASWRYV*IVFLWL Trigger: TAGCCAAAGAAAAACAATCAAGACATACCTCCAGGA...AGCCTGGAATTCCCCTTCTTGATAATTCCATGGGAGACAGCAAACCCTTCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS-3UTR CAA 90 bp | GCATTTTGGATTTCCATAGATACATGTGATCATTTGGGTTGCAGGACATCCATCAAAGGAAAGAAGGGTTaGCTGTCTCCCATGGAATTA | + |
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Preference number: 5 (lower is better) Translates to: AFWISIDTCDHLGCRTSIKGKKG*LSPMEL Trigger: TAATTCCATGGGAGACAGCAAACCCTTCTTTCCTTT...GATGGATGTCCTGCAACCCAAATGATCACATGTATCTATGGAAATCCAAAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS TCA 72 bp | TCACTTGTTGGAAAGCACAGATCTTCAGGAGCTACCTaGGGTTTCCCACTAGAGCCTCAGATCTTGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: SLVGKHRSSGAT*GFPLEPQILHW Trigger: CCAGTGCAAGATCTGAGGCTCTAGTGGGAAACCTCAGGTAGCTCCTGAAGATCTGTGCTTTCCAACAAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS CAA 72 bp | TCCCACATAGGAACACACCATTGTTTCTCTTTCCGGTaGCTGTTACACAGCTCCTGGAGGTATGTCTTGATT | + |
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Preference number: 6 (lower is better) Translates to: SHIGTHHCFSFR*LLHSSWRYVLI Trigger: AATCAAGACATACCTCCAGGAGCTGTGTAACAGCAACCGGAAAGAGAAACAATGGTGTGTTCCTATGTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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| CDS CAA 90 bp | CTCTTTATATCCCACATAGGAACACACCATTGTTTCTCTTTCCGGTaGCTGTTACACAGCTCCTGGAGGTATGTCTTGATTGTTTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LFISHIGTHHCFSFR*LLHSSWRYVLIVFL Trigger: AAGAAAAACAATCAAGACATACCTCCAGGAGCTGTGTAACAGCAACCGGAAAGAGAAACAATGGTGTGTTCCTATGTGGGATATAAAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528743.4 |
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