Pregenerated sensors for KRTAP4-3 (Homo sapiens)

Ensembl gene IDs: ENSG00000196156

Ensembl transcript IDs: ENST00000391356.4

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR TCA 90 bp	AATAGATACTCTGTGCCTGAACTGAAGGTTGAGAGCAAGAAGGTGCACAAATCCAGGTGGTCGGGCAGCTaGAAGGGCAGCGGCAGCTGG	+
Preference number: 4 (lower is better) Translates to: NRYSVPELKVESKKVHKSRWSGS*KGSGSW Trigger: CCAGCTGCCGCTGCCCTTTCAGCTGCCCGACCACCT...GGATTTGTGCACCTTCTTGCTCTCAACCTTCAGTTCAGGCACAGAGTATCTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391356.4
CDS-3UTR GCA 90 bp	AATAGATACTCTGTGCCTGAACTGAAGGTTGAGAGCAAGAAGGTGCACAAATCCCTCAGCAGCAAGAACTaGCGCAGCAGATGGGGTGGA	+
Preference number: 4 (lower is better) Translates to: NRYSVPELKVESKKVHKSLSSKN*RSRWGG Trigger: TCCACCCCATCTGCTGCGGCAGTTCTTGCTGCTGAG...GGATTTGTGCACCTTCTTGCTCTCAACCTTCAGTTCAGGCACAGAGTATCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391356.4
CDS-3UTR CCA 90 bp	AATAGATACTCTGTGCCTGAACTGAAGGTTGAGAGCAAGAAGGTGCACAAATCCAACTGCCGCAGCAGATaGGGTGGAAGCAGGTTGTTC	+
Preference number: 4 (lower is better) Translates to: NRYSVPELKVESKKVHKSNCRSR*GGSRLF Trigger: GAACAACCTGCTTCCACCCCATCTGCTGCGGCAGTT...GGATTTGTGCACCTTCTTGCTCTCAACCTTCAGTTCAGGCACAGAGTATCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391356.4
CDS-3UTR TCA 90 bp	AATAGATACTCTGTGCCTGAACTGAAGGTTGAGAGCAAGAAGGTGCACAAATCCAGTCCACATGTTCTCTaGATAGATACTCTGTGCCTG	+
Preference number: 4 (lower is better) Translates to: NRYSVPELKVESKKVHKSSPHVL*IDTLCL Trigger: CAGGCACAGAGTATCTATTCAGAGAACATGTGGACT...GGATTTGTGCACCTTCTTGCTCTCAACCTTCAGTTCAGGCACAGAGTATCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391356.4
CDS-3UTR GCA 90 bp	AATAGATACTCTGTGCCTGAACTGAAGGTTGAGAGCAAGAAGGTGCACAAATCCTTGAGAGCAAGAAGGTaGACAAATCCAGAGCAGCTT	+
Preference number: 4 (lower is better) Translates to: NRYSVPELKVESKKVHKSLRARR*TNPEQL Trigger: AAGCTGCTCTGGATTTGTGCACCTTCTTGCTCTCAA...GGATTTGTGCACCTTCTTGCTCTCAACCTTCAGTTCAGGCACAGAGTATCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391356.4
CDS-3UTR GCA 90 bp	AGGAAGTCCACATGTTCTCTGAATAGATACTCTGTGCCTGAACTGAAGGTTGAGTTCCAAATCAGTCCATaGCTCTGTTTTCACGACATC	+
Preference number: 4 (lower is better) Translates to: RKSTCSLNRYSVPELKVEFQISP*LCFHDI Trigger: GATGTCGTGAAAACAGAGGCATGGACTGATTTGGAA...CTCAACCTTCAGTTCAGGCACAGAGTATCTATTCAGAGAACATGTGGACTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391356.4
CDS CCA 90 bp	TGGAAATGCAGCAGCTGGGGCGGCAGCAGGTGGTCCTGCAGCAGGTaGTCTGGCAGCAGCTGGGGCGGCAGCAGCTCTCCTGGCCGAGAC	+
Preference number: 5 (lower is better) Translates to: WKCSSWGGSRWSCSR*SGSSWGGSSSPGRD Trigger: GTCTCGGCCAGGAGAGCTGCTGCCGCCCCAGCTGCTGCCAGACCACCTGCTGCAGGACCACCTGCTGCCGCCCCAGCTGCTGCATTTCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000391356.4
CDS-3UTR CAA 90 bp	AATAGATACTCTGTGCCTGAACTGAAGGTTGAGAGCAAGAAGGTGCACAAATCCCTCCTGGCCGAGACCTaGACCACAGCTCTGGTCAGA	+
Preference number: 5 (lower is better) Translates to: NRYSVPELKVESKKVHKSLLAET*TTALVR Trigger: TCTGACCAGAGCTGTGGTCAAGGTCTCGGCCAGGAG...GGATTTGTGCACCTTCTTGCTCTCAACCTTCAGTTCAGGCACAGAGTATCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000391356.4

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