Pregenerated sensors for KRTAP19-6 (Homo sapiens)
Ensembl gene IDs: ENSG00000186925Ensembl transcript IDs: ENST00000334046.5
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTCGCCTTGCTGAAGCATACGGGCAAGATCTTGGAGTTAGAGTATGAGAATCAGGGCCTCTGTAGTAGCTaGCATAGTATCTCATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: FALLKHTGKILELEYENQGLCSS*HSISWC Trigger: ACACCATGAGATACTATGGCAGCTACTACAGAGGCC...CTGATTCTCATACTCTAACTCCAAGATCTTGCCCGTATGCTTCAGCAAGGCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334046.5 |
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| CDS-3UTR TCA 90 bp | ATTTTCTCTACATTGAGAAAAGTGTTCGCCTTGCTGAAGCATACGGGCAAGATCAAGTGTTCGCCTTGCTaGAGCATACGGGCAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: IFSTLRKVFALLKHTGKIKCSPC*SIRARS Trigger: AGATCTTGCCCGTATGCTTCAGCAAGGCGAACACTT...GATCTTGCCCGTATGCTTCAGCAAGGCGAACACTTTTCTCAATGTAGAGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334046.5 |
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| CDS-3UTR CAA 90 bp | ATTTTCTCTACATTGAGAAAAGTGTTCGCCTTGCTGAAGCATACGGGCAAGATCCATACGGGCAAGATCTaGGAGTTAGAGTATGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: IFSTLRKVFALLKHTGKIHTGKI*ELEYEN Trigger: ATTCTCATACTCTAACTCCAAGATCTTGCCCGTATG...GATCTTGCCCGTATGCTTCAGCAAGGCGAACACTTTTCTCAATGTAGAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334046.5 |
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| CDS-3UTR CAA 90 bp | TATTTTCTCTACATTGAGAAAAGTGTTCGCCTTGCTGAAGCATACGGGCAAGATGGTATTTTCTCTACATaGAGAAAAGTGTTCGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: YFLYIEKSVRLAEAYGQDGIFST*RKVFAL Trigger: CAAGGCGAACACTTTTCTCAATGTAGAGAAAATACC...ATCTTGCCCGTATGCTTCAGCAAGGCGAACACTTTTCTCAATGTAGAGAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000334046.5 |
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