Pregenerated sensors for KRTAP13-4 (Homo sapiens)
Ensembl gene IDs: ENSG00000186971Ensembl transcript IDs: ENST00000334068.3
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGATATTAGAAGTTAATATTAGGTTACTCATTAATTTCGCAGTCTaGCAGAAGTTGGTCATGCAAGAAGCTGGTGGTGGAAGAATAAAA | + |
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Preference number: 1 (lower is better) Translates to: KILEVNIRLLINFAV*QKLVMQEAGGGRIK Trigger: TTTTATTCTTCCACCACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAATGAGTAACCTAATATTAACTTCTAATATCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| 3UTR-3UTR CAA 90 bp | TTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGGTGGTGGAAGAACATTCAGTAGAGACTTaGATCCCAATACTCAAAAGG | + |
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Preference number: 3 (lower is better) Translates to: LISQSARSWSCKKLVVEEHSVET*IPILKR Trigger: CCTTTTGAGTATTGGGATCAAAGTCTCTACTGAATG...TTCTTCCACCACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| 3UTR CCA 72 bp | AGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGGTGGTaGAAGAATAAAAAGATATTGGGATCTGGCAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: SLPEVGHARSWW*KNKKILGSGKN Trigger: ATTCTTGCCAGATCCCAATATCTTTTTATTCTTCCACCACCAGCTTCTTGCATGACCAACTTCTGGCAGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| 3UTR GCA 72 bp | GAAGTTAATATTAGGTTACTCATTAATTTCGCAGTCTaGCAGAAGTTGGTCATGCAAGAAGCTGGTGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: EVNIRLLINFAV*QKLVMQEAGGG Trigger: TCCACCACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAATGAGTAACCTAATATTAACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR CCA 90 bp | TTAGGTTACTCATTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGGCTGGGGTAGGAGCCTaGGTAGTACAGGTAGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: LGYSLISQSARSWSCKKLAGVGA*VVQVAP Trigger: GGGGGCTACCTGTACTACCCAGGCTCCTACCCCAGC...CAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAATGAGTAACCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR TCA 90 bp | AGGTTACTCATTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGGTCCAGAGCAAGTCGTCTaGCAGGGACAGCAGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: RLLINFAVCQKLVMQEAGPEQVV*QGQQRM Trigger: CATCCTCTGCTGTCCCTGTCAGACGACTTGCTCTGG...ACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAATGAGTAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR CCA 90 bp | TTAGGTTACTCATTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGTGTAGACCAGGCTGCTaGGGTAGGAGCCTGGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LGYSLISQSARSWSCKKLCRPGC*GRSLGS Trigger: ACTACCCAGGCTCCTACCCCAGCAGCCTGGTCTACA...CAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAATGAGTAACCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR CCA 90 bp | TTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGGTGGTGGAAGAACAGTCTGCCAGAAGTTaGTCATGCAAGAAGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LISQSARSWSCKKLVVEEQSARS*SCKKLV Trigger: CACCAGCTTCTTGCATGACCAACTTCTGGCAGACTG...TTCTTCCACCACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR GCA 90 bp | AGGTTACTCATTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGGTGCCAGAAGTTGGTCATaGAAGAAGCTGGTGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: RLLINFAVCQKLVMQEAGARSWS*KKLVVE Trigger: TTCCACCACCAGCTTCTTGCATGACCAACTTCTGGC...ACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAATGAGTAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR CCA 90 bp | TTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGGTGGTGGAAGAATTGGGTAGCAGAATCTaGATCCGTAACTCAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LISQSARSWSCKKLVVEELGSRI*IRNSGK Trigger: CTTCCCTGAGTTACGGATCCAGATTCTGCTACCCAA...TTCTTCCACCACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR TCA 90 bp | TTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGGTGGTGGAAGAACATATTTCAGGAATCTaGAGCCACTGGATCCATTTC | + |
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Preference number: 4 (lower is better) Translates to: LISQSARSWSCKKLVVEEHISGI*SHWIHF Trigger: GAAATGGATCCAGTGGCTTCAGATTCCTGAAATATG...TTCTTCCACCACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR TCA 90 bp | TTAGGTTACTCATTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGAGATGGGAGTTCAGCTaGGTGTACCTAAGAAGATTC | + |
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Preference number: 4 (lower is better) Translates to: LGYSLISQSARSWSCKKLRWEFS*VYLRRF Trigger: GAATCTTCTTAGGTACACTCAGCTGAACTCCCATCT...CAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAATGAGTAACCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR GCA 90 bp | GCAGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGGTGGTGGAAGAATAAAAAGAATTAATTTCGCAGTCTaGCAGAAGTTGGTCATGCAA | + |
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Preference number: 4 (lower is better) Translates to: AVCQKLVMQEAGGGRIKRINFAV*QKLVMQ Trigger: TTGCATGACCAACTTCTGGCAGACTGCGAAATTAAT...TCTTTTTATTCTTCCACCACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR CCA 90 bp | AGGTTACTCATTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGGTGGTCATGCAAGAAGCTaGTGGTGGAAGAATAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: RLLINFAVCQKLVMQEAGGHARS*WWKNKK Trigger: CTTTTTATTCTTCCACCACCAGCTTCTTGCATGACC...ACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAATGAGTAACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR CCA 90 bp | AGGTTACTCATTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGGTGCAAGAAGCTGGTGGTaGAAGAATAAAAAGATATTG | + |
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Preference number: 4 (lower is better) Translates to: RLLINFAVCQKLVMQEAGARSWW*KNKKIL Trigger: CAATATCTTTTTATTCTTCCACCACCAGCTTCTTGC...ACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAATGAGTAACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| 3UTR CAA 72 bp | ATTAGGTTACTCATTAATTTCGCAGTCTGCCAGAAGTaGGTCATGCAAGAAGCTGGTGGTGGAAGAATAAAA | + |
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Preference number: 4 (lower is better) Translates to: IRLLINFAVCQK*VMQEAGGGRIK Trigger: TTTTATTCTTCCACCACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAATGAGTAACCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR CAA 90 bp | TTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGAAGCTGGTGGTGGAAGAAAATTTAGCAGGTGAATaGATAGAAGCGAGATCCACA | + |
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Preference number: 5 (lower is better) Translates to: LISQSARSWSCKKLVVEENLAGE*IEARST Trigger: TGTGGATCTCGCTTCTATCAATTCACCTGCTAAATT...TTCTTCCACCACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGCGAAATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR CAA 90 bp | TTAATATTAGGTTACTCATTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGGCAGTCTGCCAGAAGTaGGTCATGCAAGAAGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: LILGYSLISQSARSWSCKAVCQK*VMQEAG Trigger: ACCAGCTTCTTGCATGACCAACTTCTGGCAGACTGC...CTTGCATGACCAACTTCTGGCAGACTGCGAAATTAATGAGTAACCTAATATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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| CDS-3UTR CAA 90 bp | TTAATATTAGGTTACTCATTAATTTCGCAGTCTGCCAGAAGTTGGTCATGCAAGCATTCAGTAGAGACTTaGATCCCAATACTCAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: LILGYSLISQSARSWSCKHSVET*IPILKR Trigger: CCTTTTGAGTATTGGGATCAAAGTCTCTACTGAATG...CTTGCATGACCAACTTCTGGCAGACTGCGAAATTAATGAGTAACCTAATATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334068.3 |
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