Pregenerated sensors for KRTAP12-3 (Homo sapiens)
Ensembl gene IDs: ENSG00000205439Ensembl transcript IDs: ENST00000397907.1
Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ATGCTTATTCACGGAGGGATACAGGTGTGTACCCCCGTGTACCAGGAGCAGCTGACGCACACGGAGGGCTaGCAGGAGGGAGCCACGCAC | + |
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Preference number: 4 (lower is better) Translates to: MLIHGGIQVCTPVYQEQLTHTEG*QEGATH Trigger: GTGCGTGGCTCCCTCCTGCCAGCCCTCCGTGTGCGT...CAGCTGCTCCTGGTACACGGGGGTACACACCTGTATCCCTCCGTGAATAAGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397907.1 |
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| CDS-3UTR GCA 90 bp | GGGGGTCCACCAGATGCTTATTCACGGAGGGATACAGGTGTGTACCCCCGTGTAGAGCCACGCACACAATaGGCGTGCAGCTCACGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GGPPDAYSRRDTGVYPRVEPRTQ*ACSSRA Trigger: TGCCCGTGAGCTGCACGCGCATTGTGTGCGTGGCTC...TACACGGGGGTACACACCTGTATCCCTCCGTGAATAAGCATCTGGTGGACCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397907.1 |
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| CDS-3UTR GCA 90 bp | GGGGTCCACCAGATGCTTATTCACGGAGGGATACAGGTGTGTACCCCCGTGTACCGCACACAATGCGCGTaGAGCTCACGGGCATGCACA | + |
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Preference number: 4 (lower is better) Translates to: GVHQMLIHGGIQVCTPVYRTQCA*SSRACT Trigger: TGTGCATGCCCGTGAGCTGCACGCGCATTGTGTGCG...GTACACGGGGGTACACACCTGTATCCCTCCGTGAATAAGCATCTGGTGGACCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397907.1 |
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| CDS-3UTR CCA 90 bp | AGATGCTTATTCACGGAGGGATACAGGTGTGTACCCCCGTGTACCAGGAGCAGCATGGTGGCGTGTGGCTaGGCTGGTACTGGGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RCLFTEGYRCVPPCTRSSMVACG*AGTGEE Trigger: CTCCTCCCCAGTACCAGCCCAGCCACACGCCACCAT...GCTGCTCCTGGTACACGGGGGTACACACCTGTATCCCTCCGTGAATAAGCATCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397907.1 |
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| CDS-3UTR CCA 90 bp | ACCAGATGCTTATTCACGGAGGGATACAGGTGTGTACCCCCGTGTACCAGGAGCGCACATGGTGGCGTGTaGCTGGGCTGGTACTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRCLFTEGYRCVPPCTRSAHGGV*LGWYWG Trigger: TCCCCAGTACCAGCCCAGCCACACGCCACCATGTGC...GCTCCTGGTACACGGGGGTACACACCTGTATCCCTCCGTGAATAAGCATCTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397907.1 |
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| CDS-3UTR GCA 90 bp | CCACCAGATGCTTATTCACGGAGGGATACAGGTGTGTACCCCCGTGTACCAGGATGGGGGTCCACCAGATaGTTATTCACGGAGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: PPDAYSRRDTGVYPRVPGWGSTR*LFTEGY Trigger: GTATCCCTCCGTGAATAAGCATCTGGTGGACCCCCA...TCCTGGTACACGGGGGTACACACCTGTATCCCTCCGTGAATAAGCATCTGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397907.1 |
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| CDS-3UTR CCA 90 bp | CCAGATGCTTATTCACGGAGGGATACAGGTGTGTACCCCCGTGTACCAGGAGCACAGCACCCCGAAGATTaGCAAGAGGGAGTCACATAT | + |
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Preference number: 4 (lower is better) Translates to: PDAYSRRDTGVYPRVPGAQHPED*QEGVTY Trigger: ATATGTGACTCCCTCTTGCCAATCTTCGGGGTGCTG...TGCTCCTGGTACACGGGGGTACACACCTGTATCCCTCCGTGAATAAGCATCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397907.1 |
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| CDS-3UTR CAA 90 bp | ACCAGATGCTTATTCACGGAGGGATACAGGTGTGTACCCCCGTGTACCAGGAGCGCAGCACCCCGAAGATaGGCAAGAGGGAGTCACATA | + |
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Preference number: 5 (lower is better) Translates to: TRCLFTEGYRCVPPCTRSAAPRR*ARGSHI Trigger: TATGTGACTCCCTCTTGCCAATCTTCGGGGTGCTGC...GCTCCTGGTACACGGGGGTACACACCTGTATCCCTCCGTGAATAAGCATCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397907.1 |
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