Pregenerated sensors for KRT81 (Homo sapiens)
Ensembl gene IDs: ENSG00000205426Ensembl transcript IDs: ENST00000327741.9
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGCCAGGAGTGGGAGGGGTCTTTCAAAGTGCAGGAGAAGTAGCTaGGCACTTGCTCCAGGCGCCTGGACTGGATGGGCCAAGCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: EARSGRGLSKCRRSS*ALAPGAWTGWAKQG Trigger: GCCTTGCTTGGCCCATCCAGTCCAGGCGCCTGGAGCAAGTGCTCAGCTACTTCTCCTGCACTTTGAAAGACCCCTCCCACTCCTGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| 3UTR CCA 90 bp | CTATGGGTGCCAGCGGACTTCTTTCTAGGGTGGCCTTTCCCACTGTaGGGTGGCAGAGCCCAGAAGTGGGGGATCACACAGAGAAATGTG | + |
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Preference number: 1 (lower is better) Translates to: LWVPADFFLGWPFPL*GGRAQKWGITQRNV Trigger: CACATTTCTCTGTGTGATCCCCCACTTCTGGGCTCTGCCACCCCACAGTGGGAAAGGCCACCCTAGAAAGAAGTCCGCTGGCACCCATAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| 3UTR CCA 72 bp | CCCTTCCTATGGGTGCCAGCGGACTTCTTTCTAGGGTaGCCTTTCCCACTGTGGGGTGGCAGAGCCCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: PFLWVPADFFLG*PFPLWGGRAQK Trigger: CTTCTGGGCTCTGCCACCCCACAGTGGGAAAGGCCACCCTAGAAAGAAGTCCGCTGGCACCCATAGGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| 3UTR TCA 72 bp | AGTGGGAGGGGTCTTTCAAAGTGCAGGAGAAGTAGCTaGGCACTTGCTCCAGGCGCCTGGACTGGATGGGCC | + |
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Preference number: 3 (lower is better) Translates to: SGRGLSKCRRSS*ALAPGAWTGWA Trigger: GGCCCATCCAGTCCAGGCGCCTGGAGCAAGTGCTCAGCTACTTCTCCTGCACTTTGAAAGACCCCTCCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | AGGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTGGGGCGGCGCCTGGACTGGATaGGCCAAGCAAGGCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RRLDWMGQARQGRKDAWGGAWTG*AKQGRA Trigger: TGCCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCC...GCCCCAGGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR TCA 90 bp | TGGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTGGGGCCTGGGACCCACACCCAGGGAGCTaGTACCACAGGAGCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: WTGWAKQGRAGKMPGAWDPHPGS*YHRSPR Trigger: GCGTGGGCTCCTGTGGTATCAGCTCCCTGGGTGTGG...GTCCCAGGCCCCAGGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR GCA 90 bp | GGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTGGGGCCCGTTGCACGGAGCGCTaGAGACACTGCCAGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: GAWTGWAKQGRAGKMPGARCTER*RHCQSL Trigger: CAGTGACTGGCAGTGTCTGCAGCGCTCCGTGCAACG...GGCCCCAGGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | GGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTGGGGCCAAGATGCCTGGGGCCTaGGACTTGAGTTGGGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: GAWTGWAKQGRAGKMPGAKMPGA*DLSWGA Trigger: GGCACCCCAACTCAAGTCCCAGGCCCCAGGCATCTT...GGCCCCAGGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | AGGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTGGGGCTCCAGGCGCCTGGACTaGATGGGCCAAGCAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RRLDWMGQARQGRKDAWGSRRLD*MGQARQ Trigger: CTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCTGGA...GCCCCAGGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR TCA 90 bp | AAGGGGAGAGGCAGGAAGGCAGTTGCCGTGGGCAAGGTTCTGGTCCTGGCCCTTCGCCCCGGGAGCTGCTaGCACAGACATTCACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: KGRGRKAVAVGKVLVLALRPGSC*HRHSQP Trigger: GGGCTGTGAATGTCTGTGTCAGCAGCTCCCGGGGCG...AAGGGCCAGGACCAGAACCTTGCCCACGGCAACTGCCTTCCTGCCTCTCCCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR GCA 90 bp | TGGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTGGGGCCTGGGACATTTCCGGCAGCTGCTaGCGCAAGACCCCACACCCA | + |
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Preference number: 4 (lower is better) Translates to: WTGWAKQGRAGKMPGAWDISGSC*RKTPHP Trigger: TGGGTGTGGGGTCTTGCGGCAGCAGCTGCCGGAAAT...GTCCCAGGCCCCAGGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | GTAGCTGAGCACTTGCTCCAGGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGCCGCGGCCTCCAGCTTaGAGTTCTGGCACTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: VAEHLLQAPGLDGPSKAGPRPPA*SSGTWH Trigger: ATGCCAAGTGCCAGAACTCCAAGCTGGAGGCCGCGG...CCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCTGGAGCAAGTGCTCAGCTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | GGAAGGCAGTTGCCGTGGGCAAGGTTCTGGTCCTGGCCCTTCCTGCTCCTGAGGCAGGTGGTGTTCAATTaGCCGCAGGGCGCACACAGG | + |
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Preference number: 4 (lower is better) Translates to: GRQLPWARFWSWPFLLLRQVVFN*PQGAHR Trigger: CCTGTGTGCGCCCTGCGGCCAATTGAACACCACCTG...CCTCAGGAGCAGGAAGGGCCAGGACCAGAACCTTGCCCACGGCAACTGCCTTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | GTAGCTGAGCACTTGCTCCAGGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGAACCCCCTCCGCAGGTaGTGTTCAATTGGCCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VAEHLLQAPGLDGPSKAGNPLRR*CSIGRR Trigger: CCTGCGGCCAATTGAACACCACCTGCGGAGGGGGTT...CCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCTGGAGCAAGTGCTCAGCTAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | GTAGCTGAGCACTTGCTCCAGGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGCTTGCTCCAGGCGCCTaGACTGGATGGGCCAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: VAEHLLQAPGLDGPSKAGLAPGA*TGWAKQ Trigger: TTGCTTGGCCCATCCAGTCCAGGCGCCTGGAGCAAG...CCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCTGGAGCAAGTGCTCAGCTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | GGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTGGGGCCTGGGACTTGAGTCCGTGGGCAAGGTTCTaGTCCTGGCCCTTCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GWAKQGRAGKMPGAWDLSPWARF*SWPFLL Trigger: GAGCAGGAAGGGCCAGGACCAGAACCTTGCCCACGG...ACTCAAGTCCCAGGCCCCAGGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | TGGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTGGGGCCTGGGACGGAAGGCAGTTGCCGTaGGCAAGGTTCTGGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: WTGWAKQGRAGKMPGAWDGRQLP*ARFWSW Trigger: CCAGGACCAGAACCTTGCCCACGGCAACTGCCTTCC...GTCCCAGGCCCCAGGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR TCA 90 bp | GTAGCTGAGCACTTGCTCCAGGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGCTGATCCGCAGGTCATaGTCCTCCTGGACGTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: VAEHLLQAPGLDGPSKAGLIRRS*SSWTFG Trigger: CCCAAACGTCCAGGAGGATCATGACCTGCGGATCAG...CCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCTGGAGCAAGTGCTCAGCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR TCA 90 bp | GTAGCTGAGCACTTGCTCCAGGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGGCGCCCACCAAATCCTaGTCCGCAGGTCATGATCCT | + |
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Preference number: 4 (lower is better) Translates to: VAEHLLQAPGLDGPSKAGAPTKS*SAGHDP Trigger: AGGATCATGACCTGCGGATCAGGATTTGGTGGGCGC...CCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCTGGAGCAAGTGCTCAGCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR TCA 90 bp | AAGGGGAGAGGCAGGAAGGCAGTTGCCGTGGGCAAGGTTCTGGTCCTGGCCCTTTGCAGGAGAAGTAGCTaGGCACTTGCTCCAGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: KGRGRKAVAVGKVLVLALCRRSS*ALAPGA Trigger: GGCGCCTGGAGCAAGTGCTCAGCTACTTCTCCTGCA...AAGGGCCAGGACCAGAACCTTGCCCACGGCAACTGCCTTCCTGCCTCTCCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR GCA 90 bp | AAGGGGAGAGGCAGGAAGGCAGTTGCCGTGGGCAAGGTTCTGGTCCTGGCCCTTCCTTCACATAGCCTCTaGTCCTCGCCCTCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KGRGRKAVAVGKVLVLALPSHSL*SSPSSR Trigger: CCTGCTGGAGGGCGAGGAGCAGAGGCTATGTGAAGG...AAGGGCCAGGACCAGAACCTTGCCCACGGCAACTGCCTTCCTGCCTCTCCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR GCA 90 bp | GTAGCTGAGCACTTGCTCCAGGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGAACATTTCCGGCAGCTaGTGCCGCAAGACCCCACAC | + |
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Preference number: 4 (lower is better) Translates to: VAEHLLQAPGLDGPSKAGNISGS*CRKTPH Trigger: GTGTGGGGTCTTGCGGCAGCAGCTGCCGGAAATGTT...CCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCTGGAGCAAGTGCTCAGCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR GCA 90 bp | TGCTCCAGGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCAGGCAGGAAGGCAGTTaGCGTGGGCAAGGTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: CSRRLDWMGQARQGRKDARQEGS*RGQGSG Trigger: ACCAGAACCTTGCCCACGGCAACTGCCTTCCTGCCT...GGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCTGGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | TGCTCCAGGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCGGCAGGAAAGATGCCTaGGGCCTGGGACTTGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: CSRRLDWMGQARQGRKDAGRKDA*GLGLEL Trigger: CAACTCAAGTCCCAGGCCCCAGGCATCTTTCCTGCC...GGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCTGGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | AAGGGGAGAGGCAGGAAGGCAGTTGCCGTGGGCAAGGTTCTGGTCCTGGCCCTTTGGCCTTTCCCACTGTaGGGTGGCAGAGCCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: KGRGRKAVAVGKVLVLALWPFPL*GGRAQK Trigger: CTTCTGGGCTCTGCCACCCCACAGTGGGAAAGGCCA...AAGGGCCAGGACCAGAACCTTGCCCACGGCAACTGCCTTCCTGCCTCTCCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR TCA 90 bp | GGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTGGGGCCTGGGACTTGAGTCTGGGGCCTGGGACTTaGGTTGGGGTGCCTAACATT | + |
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Preference number: 4 (lower is better) Translates to: GWAKQGRAGKMPGAWDLSLGPGT*VGVPNI Trigger: AATGTTAGGCACCCCAACTCAAGTCCCAGGCCCCAG...ACTCAAGTCCCAGGCCCCAGGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR GCA 90 bp | AAGGGGAGAGGCAGGAAGGCAGTTGCCGTGGGCAAGGTTCTGGTCCTGGCCCTTCCTGGACGTTTGGGTTaGAGAGGACAGGATAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KGRGRKAVAVGKVLVLALPGRLG*RGQDRG Trigger: TCCCCTATCCTGTCCTCTGCAACCCAAACGTCCAGG...AAGGGCCAGGACCAGAACCTTGCCCACGGCAACTGCCTTCCTGCCTCTCCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR GCA 90 bp | GGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTGGGGCCTGGGACTGGACTTGAGTTGGGGTaGCTAACATTTCCGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GLDGPSKAGQERCLGPGTGLELG*LTFPAA Trigger: AGCTGCCGGAAATGTTAGGCACCCCAACTCAAGTCC...AGTCCCAGGCCCCAGGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | TGCTCCAGGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTCCAGCTTGGAGTTCTaGCACTTGGCATTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: CSRRLDWMGQARQGRKDASSLEF*HLAFST Trigger: GGTGGAGAATGCCAAGTGCCAGAACTCCAAGCTGGA...GGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCTGGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | GGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTGGGGCCTGGGACTGGCAGAGCCCAGAAGTaGGGGATCACACAGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: GLDGPSKAGQERCLGPGTGRAQK*GITQRN Trigger: ATTTCTCTGTGTGATCCCCCACTTCTGGGCTCTGCC...AGTCCCAGGCCCCAGGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR TCA 90 bp | TGCTCCAGGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTGTGCGACTGGAGAATaGGGATCTCCTCCTCATACA | + |
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Preference number: 4 (lower is better) Translates to: CSRRLDWMGQARQGRKDACATGE*GSPPHT Trigger: TGTATGAGGAGGAGATCCTCATTCTCCAGTCGCACA...GGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCTGGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR GCA 90 bp | GGAAGGCAGTTGCCGTGGGCAAGGTTCTGGTCCTGGCCCTTCCTGCTCCTGAGGCATTCACAGCCCCAATaGCTTCACATAGCCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GRQLPWARFWSWPFLLLRHSQPQ*LHIASA Trigger: AGCAGAGGCTATGTGAAGGCATTGGGGCTGTGAATG...CCTCAGGAGCAGGAAGGGCCAGGACCAGAACCTTGCCCACGGCAACTGCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | TGCTCCAGGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCATCCTCCTGGACGTTTaGGTTGCAGAGGACAGGATA | + |
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Preference number: 4 (lower is better) Translates to: CSRRLDWMGQARQGRKDAILLDV*VAEDRI Trigger: TATCCTGTCCTCTGCAACCCAAACGTCCAGGAGGAT...GGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCCTGGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CCA 90 bp | AAGGGGAGAGGCAGGAAGGCAGTTGCCGTGGGCAAGGTTCTGGTCCTGGCCCTTGACTTCTTTCTAGGGTaGCCTTTCCCACTGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: KGRGRKAVAVGKVLVLALDFFLG*PFPLWG Trigger: ACCCCACAGTGGGAAAGGCCACCCTAGAAAGAAGTC...AAGGGCCAGGACCAGAACCTTGCCCACGGCAACTGCCTTCCTGCCTCTCCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CAA 90 bp | GGAAGGCAGTTGCCGTGGGCAAGGTTCTGGTCCTGGCCCTTCCTGCTCCTGAGGGCAGGTGGTGTTCAATaGGCCGCAGGGCGCACACAG | + |
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Preference number: 5 (lower is better) Translates to: GRQLPWARFWSWPFLLLRAGGVQ*AAGRTQ Trigger: CTGTGTGCGCCCTGCGGCCAATTGAACACCACCTGC...CCTCAGGAGCAGGAAGGGCCAGGACCAGAACCTTGCCCACGGCAACTGCCTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CAA 90 bp | GGCGCCTGGACTGGATGGGCCAAGCAAGGCAGGGCAGGAAAGATGCCTGGGGCCGATCCTCCTGGACGTTaGGGTTGCAGAGGACAGGAT | + |
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Preference number: 5 (lower is better) Translates to: GAWTGWAKQGRAGKMPGADPPGR*GCRGQD Trigger: ATCCTGTCCTCTGCAACCCAAACGTCCAGGAGGATC...GGCCCCAGGCATCTTTCCTGCCCTGCCTTGCTTGGCCCATCCAGTCCAGGCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CAA 90 bp | AAGGGGAGAGGCAGGAAGGCAGTTGCCGTGGGCAAGGTTCTGGTCCTGGCCCTTGAGGCAGGAAGGCAGTaGCCGTGGGCAAGGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: KGRGRKAVAVGKVLVLALEAGRQ*PWARFW Trigger: CCAGAACCTTGCCCACGGCAACTGCCTTCCTGCCTC...AAGGGCCAGGACCAGAACCTTGCCCACGGCAACTGCCTTCCTGCCTCTCCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS-3UTR CAA 90 bp | GGAAGGCAGTTGCCGTGGGCAAGGTTCTGGTCCTGGCCCTTCCTGCTCCTGAGGGGCCTGGGACTTGAGTaGGGGTGCCTAACATTTCCG | + |
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Preference number: 5 (lower is better) Translates to: GRQLPWARFWSWPFLLLRGLGLE*GCLTFP Trigger: CGGAAATGTTAGGCACCCCAACTCAAGTCCCAGGCC...CCTCAGGAGCAGGAAGGGCCAGGACCAGAACCTTGCCCACGGCAACTGCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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| CDS CCA 72 bp | AATCCTGATCCGCAGGTCATGATCCTCCTGGACGTTTaGGTTGCAGAGGACAGGATAGGGGACCTGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: NPDPQVMILLDV*VAEDRIGDLES Trigger: GGACTCCAGGTCCCCTATCCTGTCCTCTGCAACCCAAACGTCCAGGAGGATCATGACCTGCGGATCAGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000327741.9 |
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