RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KRT75 (Homo sapiens)

Ensembl gene IDs: ENSG00000170454

Ensembl transcript IDs: ENST00000252245.6

Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAGGGAGAGGCTaGCTTAGGCCTGGGAATGGGTATAGCCAGTACTCCAGGCTCCCA +
Preference number: 1 (lower is better)
Translates to: RRVLLAVWALSGGRG*LRPGNGYSQYSRLP
Trigger: TGGGAGCCTGGAGTACTGGCTATACCCATTCCCAGGCCTAAGCCAGCCTCTCCCTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR GCA 90 bp CTGGGAATGGGTATAGCCAGTACTCCAGGCTCCCAGCAGCACAGGTaGACCTTACAAGGAGAGAGGAAGGAGGAGGACCCTGGTGTCCAG +
Preference number: 1 (lower is better)
Translates to: LGMGIASTPGSQQHR*TLQGERKEEDPGVQ
Trigger: CTGGACACCAGGGTCCTCCTCCTTCCTCTCTCCTTGTAAGGTGCACCTGTGCTGCTGGGAGCCTGGAGTACTGGCTATACCCATTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR CCA 90 bp GCAGCACAGGTGCACCTTACAAGGAGAGAGGAAGGAGGAGGACCCTaGTGTCCAGGTGTGACTGCAAACAGGCCTCAAGGCAGGGTAGAG +
Preference number: 1 (lower is better)
Translates to: AAQVHLTRREEGGGP*CPGVTANRPQGRVE
Trigger: CTCTACCCTGCCTTGAGGCCTGTTTGCAGTCACACCTGGACACCAGGGTCCTCCTCCTTCCTCTCTCCTTGTAAGGTGCACCTGTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR CCA 90 bp GAGAGAGCAGGCTTTGGTTTCACATGTGTAACAGACGGGTGCTGCTaGCAGTCTGGGCACTGTCAGGAGGGAGAGGCTGGCTTAGGCCTG +
Preference number: 1 (lower is better)
Translates to: ERAGFGFTCVTDGCC*QSGHCQEGEAGLGL
Trigger: CAGGCCTAAGCCAGCCTCTCCCTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACCAAAGCCTGCTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR TCA 90 bp AGCTGGAGGAGGACTTTCCAGCTGCCCGGGCCTCGCAAGATAGGCTaGATGAGAGCCTTAGGAGAGAGCAGGCTTTGGTTTCACATGTGT +
Preference number: 1 (lower is better)
Translates to: SWRRTFQLPGPRKIG*MRALGESRLWFHMC
Trigger: ACACATGTGAAACCAAAGCCTGCTCTCTCCTAAGGCTCTCATTCAGCCTATCTTGCGAGGCCCGGGCAGCTGGAAAGTCCTCCTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR TCA 90 bp ACTCACTCCCAGCAGGCCACTTATAAACACTATGAGACAGGTGGGTaGCAACCTGGCATTGAGAGACTCCCCAGCCTCTGCATCTGGAGG +
Preference number: 1 (lower is better)
Translates to: THSQQATYKHYETGG*QPGIERLPSLCIWR
Trigger: CCTCCAGATGCAGAGGCTGGGGAGTCTCTCAATGCCAGGTTGTCACCCACCTGTCTCATAGTGTTTATAAGTGGCCTGCTGGGAGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR-3UTR CCA 90 bp CCCCAGCCTCTGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTGAAGGAGGAGGACCCTaGTGTCCAGGTGTGACTGCA +
Preference number: 2 (lower is better)
Translates to: PQPLHLEGGREVELEEDFEGGGP*CPGVTA
Trigger: TGCAGTCACACCTGGACACCAGGGTCCTCCTCCTTC...AAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCAGAGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR-3UTR GCA 90 bp CAGCCTCTGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGTAACAGACGGGTGCTaGTGGCAGTCTGGGCACTGT +
Preference number: 2 (lower is better)
Translates to: QPLHLEGGREVELEEDFPVTDGC*WQSGHC
Trigger: ACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTAC...TGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCAGAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR-3UTR GCA 90 bp GGTTTCACATGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAGGTGTCCAGGTGTGACTaGAAACAGGCCTCAAGGCAG +
Preference number: 2 (lower is better)
Translates to: GFTCVTDGCCWQSGHCQEVSRCD*KQASRQ
Trigger: CTGCCTTGAGGCCTGTTTGCAGTCACACCTGGACAC...CTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR-3UTR GCA 90 bp ACTATGAGACAGGTGGGTGACAACCTGGCATTGAGAGACTCCCCAGCCTCTGCATCCCAGCAGCACAGGTaGACCTTACAAGGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: TMRQVGDNLALRDSPASASQQHR*TLQGER
Trigger: CCTCTCTCCTTGTAAGGTGCACCTGTGCTGCTGGGA...TGCAGAGGCTGGGGAGTCTCTCAATGCCAGGTTGTCACCCACCTGTCTCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR CCA 72 bp CTGCTGGCAGTCTGGGCACTGTCAGGAGGGAGAGGCTaGCTTAGGCCTGGGAATGGGTATAGCCAGTACTCC +
Preference number: 3 (lower is better)
Translates to: LLAVWALSGGRG*LRPGNGYSQYS
Trigger: GGAGTACTGGCTATACCCATTCCCAGGCCTAAGCCAGCCTCTCCCTCCTGACAGTGCCCAGACTGCCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR CCA 72 bp GGCTTTGGTTTCACATGTGTAACAGACGGGTGCTGCTaGCAGTCTGGGCACTGTCAGGAGGGAGAGGCTGGC +
Preference number: 3 (lower is better)
Translates to: GFGFTCVTDGCC*QSGHCQEGEAG
Trigger: GCCAGCCTCTCCCTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACCAAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR GCA 72 bp GGTATAGCCAGTACTCCAGGCTCCCAGCAGCACAGGTaGACCTTACAAGGAGAGAGGAAGGAGGAGGACCCT +
Preference number: 3 (lower is better)
Translates to: GIASTPGSQQHR*TLQGERKEEDP
Trigger: AGGGTCCTCCTCCTTCCTCTCTCCTTGTAAGGTGCACCTGTGCTGCTGGGAGCCTGGAGTACTGGCTATACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR GCA 72 bp GCAGGCTTTGGTTTCACATGTGTAACAGACGGGTGCTaGTGGCAGTCTGGGCACTGTCAGGAGGGAGAGGCT +
Preference number: 3 (lower is better)
Translates to: AGFGFTCVTDGC*WQSGHCQEGEA
Trigger: AGCCTCTCCCTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACCAAAGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR GCA 72 bp AGAGCAGGCTTTGGTTTCACATGTGTAACAGACGGGTaGTGCTGGCAGTCTGGGCACTGTCAGGAGGGAGAG +
Preference number: 3 (lower is better)
Translates to: RAGFGFTCVTDG*CWQSGHCQEGE
Trigger: CTCTCCCTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACCAAAGCCTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR TCA 72 bp AGGACTTTCCAGCTGCCCGGGCCTCGCAAGATAGGCTaGATGAGAGCCTTAGGAGAGAGCAGGCTTTGGTTT +
Preference number: 3 (lower is better)
Translates to: RTFQLPGPRKIG*MRALGESRLWF
Trigger: AAACCAAAGCCTGCTCTCTCCTAAGGCTCTCATTCAGCCTATCTTGCGAGGCCCGGGCAGCTGGAAAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
3UTR TCA 72 bp CAGCAGGCCACTTATAAACACTATGAGACAGGTGGGTaGCAACCTGGCATTGAGAGACTCCCCAGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: QQATYKHYETGG*QPGIERLPSLC
Trigger: GCAGAGGCTGGGGAGTCTCTCAATGCCAGGTTGTCACCCACCTGTCTCATAGTGTTTATAAGTGGCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp AGCCTCTGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGGCGGGAGCGGCCAGCTaGCGGGGTGATGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: SLCIWREGGRWSWRRTFQAGAAS*RGDGRG
Trigger: ACCTCGGCCATCACCCCGGCAGCTGGCCGCTCCCGC...CTGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCAGAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp TGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGCTGCCCGCCCCCACTCCCTGCTaGAGAGCGGGCCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: CIWREGGRWSWRRTFQLPAPTPC*RAGHRD
Trigger: GTCTCTGTGGCCCGCTCTGCAGCAGGGAGTGGGGGC...GGGCAGCTGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp CTGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGCTGCCTGCCCCTCTCGGTGGTaGTGCTTTCCAGCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: LHLEGGREVELEEDFPAACPSRW*CFPAAV
Trigger: GACGGCAGCTGGAAAGCATCACCACCGAGAGGGGCA...GGCAGCTGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp CAGCCTCTGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAACTGCCGAGACATGGTaGGTGAGGAAGGCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: QPLHLEGGREVELEEDFPTAETW*VRKAGE
Trigger: CTCGCCGGCCTTCCTCACCCACCATGTCTCGGCAGT...TGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCAGAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp CTGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGCTGCCCTGCGGCTGCCAGACTaGAAGGTGATGGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: LHLEGGREVELEEDFPAALRLPD*KVMEDC
Trigger: GCAGTCCTCCATCACCTTCCAGTCTGGCAGCCGCAG...GGCAGCTGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp GGAGGAGGACCCTGGTGTCCAGGTGTGACTGCAAACAGGCCTCAAGGCAGGGTATGGCCCGTGCATCCTTaGGAGCCAGTTCTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: GGGPWCPGVTANRPQGRVWPVHP*EPVLPA
Trigger: AGCGGGGAGAACTGGCTCTCAAGGATGCACGGGCCA...TACCCTGCCTTGAGGCCTGTTTGCAGTCACACCTGGACACCAGGGTCCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp GGTTTCACATGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAGGCCCACCACTGGTGGTaGAGGAGTAGCCGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GFTCVTDGCCWQSGHCQEAHHWW*RSSRCP
Trigger: GGGGCAGCGGCTACTCCTTCACCACCAGTGGTGGGC...CTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp CAGCCTCTGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGGTTGCTGGTGGCACTaGATCCAGAACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QPLHLEGGREVELEEDFPGCWWH*IQNLPG
Trigger: GCCTGGGAGGTTCTGGATTCAGTGCCACCAGCAACC...TGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCAGAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp AGCCTCTGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGACCTGTTGCTGGCCCTaGCACCAAAGCCACTTCGGC +
Preference number: 4 (lower is better)
Translates to: SLCIWREGGRWSWRRTFQTCCWP*HQSHFG
Trigger: GCCGAAGTGGCTTTGGTGGCAGGGCCAGCAACAGGT...CTGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCAGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp TGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGCTGCCCCCTCTCCACTCAACCTaGACTCCTCGCCTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: CIWREGGRWSWRRTFQLPPLHST*TPRLPA
Trigger: TGCTGGAAGGCGAGGAGTGCAGGTTGAGTGGAGAGG...GGGCAGCTGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp TGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGCTGCCCTGTGTAACAGACGGGTaGTGCTGGCAGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: CIWREGGRWSWRRTFQLPCVTDG*CWQSGH
Trigger: GTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACA...GGGCAGCTGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp GGAGGAGGACCCTGGTGTCCAGGTGTGACTGCAAACAGGCCTCAAGGCAGGGTAAGGACTGCCGAGACATaGTGGGTGAGGAAGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GGGPWCPGVTANRPQGRVRTAET*WVRKAG
Trigger: GCCGGCCTTCCTCACCCACCATGTCTCGGCAGTCCT...TACCCTGCCTTGAGGCCTGTTTGCAGTCACACCTGGACACCAGGGTCCTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp GGTTTCACATGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAGCGGCGAGAAGGCACCTaGGGTGGGCTGGTACAGGCA +
Preference number: 4 (lower is better)
Translates to: GFTCVTDGCCWQSGHCQERREGT*GGLVQA
Trigger: TGCCTGTACCAGCCCACCTCAGGTGCCTTCTCGCCG...CTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp TGGTTTCACATGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGACAGGCCCCCACTCCCTaGTGCAGAGCGGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: WFHMCNRRVLLAVWALSGQAPTP*CRAGHR
Trigger: TCTGTGGCCCGCTCTGCAGCAGGGAGTGGGGGCCTG...TCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp GGAGGAGGACCCTGGTGTCCAGGTGTGACTGCAAACAGGCCTCAAGGCAGGGTATCAGGAGGGAGAGGCTaGCTTAGGCCTGGGAATGGG +
Preference number: 4 (lower is better)
Translates to: GGGPWCPGVTANRPQGRVSGGRG*LRPGNG
Trigger: CCCATTCCCAGGCCTAAGCCAGCCTCTCCCTCCTGA...TACCCTGCCTTGAGGCCTGTTTGCAGTCACACCTGGACACCAGGGTCCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp GCACTCACTCCCAGCAGGCCACTTATAAACACTATGAGACAGGTGGGTGACAACTGGCCGAGGTGGTGCTaGAGCCCCTGCGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ALTPSRPLINTMRQVGDNWPRWC*SPCGCQ
Trigger: CTGGCAGCCGCAGGGGCTTCAGCACCACCTCGGCCA...GTTGTCACCCACCTGTCTCATAGTGTTTATAAGTGGCCTGCTGGGAGTGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp CCCCAGCCTCTGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCTCGCAAGATAGGCTaGATGAGAGCCTTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PQPLHLEGGREVELEEDFPRKIG*MRALGE
Trigger: CTCTCCTAAGGCTCTCATTCAGCCTATCTTGCGAGG...AAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCAGAGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp TGGTTTCACATGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAACAGTCCTGGAGCCCTaGTCCTGCAGGAGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: WFHMCNRRVLLAVWALSGTVLEP*SCRRAH
Trigger: GTGGGCCCTCCTGCAGGAGCAGGGCTCCAGGACTGT...TCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp CAGCCTCTGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGTGATGCTTTCCAGCTaGCGTCGGAGCTCACTGGTA +
Preference number: 4 (lower is better)
Translates to: QPLHLEGGREVELEEDFPVMLSS*RRSSLV
Trigger: TACCAGTGAGCTCCGACGGCAGCTGGAAAGCATCAC...TGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCAGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp GGAGAGGCTGGCTTAGGCCTGGGAATGGGTATAGCCAGTACTCCAGGCTCCCAGCACCAGCTTGGCCCGTaGATCCTTGAGAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GEAGLGLGMGIASTPGSQHQLGP*ILESQF
Trigger: GAACTGGCTCTCAAGGATGCACGGGCCAAGCTGGTG...CTGGGAGCCTGGAGTACTGGCTATACCCATTCCCAGGCCTAAGCCAGCCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp GGAGGAGGACCCTGGTGTCCAGGTGTGACTGCAAACAGGCCTCAAGGCAGGGTAGATGTGTCACCGACCTaGGTCTGCAACTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: GGGPWCPGVTANRPQGRVDVSPT*VCNWDS
Trigger: GCTGTCCCAGTTGCAGACCCAGGTCGGTGACACATC...TACCCTGCCTTGAGGCCTGTTTGCAGTCACACCTGGACACCAGGGTCCTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp TGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGCTGCCCTGGAACACTGCTTCTTaGCGCTGTCAATCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: CIWREGGRWSWRRTFQLPWNTAS*RCQSQL
Trigger: GAGCTGAGATTGACAGCGTCAAGAAGCAGTGTTCCA...GGGCAGCTGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp GGAGGAGGACCCTGGTGTCCAGGTGTGACTGCAAACAGGCCTCAAGGCAGGGTATCCCAGCAGCACAGGTaGACCTTACAAGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GGGPWCPGVTANRPQGRVSQQHR*TLQGER
Trigger: CCTCTCTCCTTGTAAGGTGCACCTGTGCTGCTGGGA...TACCCTGCCTTGAGGCCTGTTTGCAGTCACACCTGGACACCAGGGTCCTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp AGACACATTCCAGGGAGGGAACAGAGGGAGCACTCACTCCCAGCAGGCCACTTATGCCAGACTGGAAGGTaGTGGAGGACTGCCGAGACA +
Preference number: 4 (lower is better)
Translates to: RHIPGREQREHSLPAGHLCQTGR*WRTAET
Trigger: TGTCTCGGCAGTCCTCCATCACCTTCCAGTCTGGCA...TAAGTGGCCTGCTGGGAGTGAGTGCTCCCTCTGTTCCCTCCCTGGAATGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp TGGTTTCACATGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGACCTGCACCCAGGCTATaGCCACCACTGGTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: WFHMCNRRVLLAVWALSGPAPRL*PPLVVK
Trigger: CTTCACCACCAGTGGTGGGCATAGCCTGGGTGCAGG...TCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp GGCTTTGGTTTCACATGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTACAGACGGGTGCTGCTaGCAGTCTGGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: GFGFTCVTDGCCWQSGHCTDGCC*QSGHCQ
Trigger: CTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGT...ACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACCAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp ACACATGCATTTAATAGACACATTCCAGGGAGGGAACAGAGGGAGCACTCACTCTGGCCCCAGCACTGCTaGTCCTTCCCAGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: THAFNRHIPGREQREHSLWPQHC*SFPGPH
Trigger: GTGGGGGCCTGGGAAGGATCAGCAGTGCTGGGGCCA...GAGTGAGTGCTCCCTCTGTTCCCTCCCTGGAATGTGTCTATTAAATGCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp AGAGGGAGCACTCACTCCCAGCAGGCCACTTATAAACACTATGAGACAGGTGGGTGCTGCCACACCCATTaGTGGAGACCCGCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: RGSTHSQQATYKHYETGGCCHTH*WRPAWH
Trigger: GTGCCAAGCGGGTCTCCATCAATGGGTGTGGCAGCA...CCCACCTGTCTCATAGTGTTTATAAGTGGCCTGCTGGGAGTGAGTGCTCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp AGACACATTCCAGGGAGGGAACAGAGGGAGCACTCACTCCCAGCAGGCCACTTAAAGGTGATGGAGGACTaGCGAGACATGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RHIPGREQREHSLPAGHLKVMED*RDMVGE
Trigger: CTCACCCACCATGTCTCGGCAGTCCTCCATCACCTT...TAAGTGGCCTGCTGGGAGTGAGTGCTCCCTCTGTTCCCTCCCTGGAATGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp AGAGGGAGCACTCACTCCCAGCAGGCCACTTATAAACACTATGAGACAGGTGGGAGGGGCTCTAGGTTCTaGCTCACAGTCCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RGSTHSQQATYKHYETGGRGSRF*LTVLEP
Trigger: GGGCTCCAGGACTGTGAGGCAGAACCTAGAGCCCCT...CCCACCTGTCTCATAGTGTTTATAAGTGGCCTGCTGGGAGTGAGTGCTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp ACTATGAGACAGGTGGGTGACAACCTGGCATTGAGAGACTCCCCAGCCTCTGCACACCTCCAATGCTGCTaGCGCTTCCATAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: TMRQVGDNLALRDSPASAHLQCC*RFHSHW
Trigger: CCAGTGGCTATGGAAGCGGCAGCAGCATTGGAGGTG...TGCAGAGGCTGGGGAGTCTCTCAATGCCAGGTTGTCACCCACCTGTCTCATAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp GCACTCACTCCCAGCAGGCCACTTATAAACACTATGAGACAGGTGGGTGACAACAGACTCCCCAGCCTCTaGATCTGGAGGGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALTPSRPLINTMRQVGDNRLPSL*IWREGG
Trigger: CCCTCCCTCCCTCCAGATGCAGAGGCTGGGGAGTCT...GTTGTCACCCACCTGTCTCATAGTGTTTATAAGTGGCCTGCTGGGAGTGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp TGGTTTCACATGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAGCACCTGAGGTGGGCTaGTACAGGCAGTGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: WFHMCNRRVLLAVWALSGAPEVG*YRQWRR
Trigger: TCTTCTCCACTGCCTGTACCAGCCCACCTCAGGTGC...TCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp ACACATGCATTTAATAGACACATTCCAGGGAGGGAACAGAGGGAGCACTCACTCCCGAGACATGGTGGGTaGGGAAGGCCGGCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: THAFNRHIPGREQREHSLPRHGG*GRPARR
Trigger: CCTTCTCGCCGGCCTTCCTCACCCACCATGTCTCGG...GAGTGAGTGCTCCCTCTGTTCCCTCCCTGGAATGTGTCTATTAAATGCATGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp ATAAACACTATGAGACAGGTGGGTGACAACCTGGCATTGAGAGACTCCCCAGCCGCCAGTTCTCCCCGCTaGTCTGCATCAGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: INTMRQVGDNLALRDSPAASSPR*SASAMA
Trigger: GGCCATTGCTGATGCAGAGCAGCGGGGAGAACTGGC...GGCTGGGGAGTCTCTCAATGCCAGGTTGTCACCCACCTGTCTCATAGTGTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp TGGTTTCACATGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAGGTTTCCACCTCCAATaGTGCTGCCGCTTCCATAGC +
Preference number: 4 (lower is better)
Translates to: WFHMCNRRVLLAVWALSGGFHLQ*CCRFHS
Trigger: GCTATGGAAGCGGCAGCAGCATTGGAGGTGGAAACC...TCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp TGGTTTCACATGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAGTGTCCAGGTGTGACTaGAAACAGGCCTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: WFHMCNRRVLLAVWALSGVSRCD*KQASRQ
Trigger: CTGCCTTGAGGCCTGTTTGCAGTCACACCTGGACAC...TCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp GGAGGGAACAGAGGGAGCACTCACTCCCAGCAGGCCACTTATAAACACTATGAGCTCCAAACCTGTTGCTaGCCCTGCCACCAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GGNRGSTHSQQATYKHYELQTCC*PCHQSH
Trigger: GTGGCTTTGGTGGCAGGGCCAGCAACAGGTTTGGAG...CTCATAGTGTTTATAAGTGGCCTGCTGGGAGTGAGTGCTCCCTCTGTTCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp GGTTTCACATGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAGGCCGTCGGAGCTCACTaGTATAGGAATCAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: GFTCVTDGCCWQSGHCQEAVGAH*YRNQRG
Trigger: CCCTCTTTGATTCCTATACCAGTGAGCTCCGACGGC...CTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp GGTTTCACATGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAGTATGAGACAGGTGGGTaGCAACCTGGCATTGAGAGA +
Preference number: 4 (lower is better)
Translates to: GFTCVTDGCCWQSGHCQEYETGG*QPGIER
Trigger: TCTCTCAATGCCAGGTTGTCACCCACCTGTCTCATA...CTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACATGTGAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp GCACTCACTCCCAGCAGGCCACTTATAAACACTATGAGACAGGTGGGTGACAACGTAACAGACGGGTGCTaGTGGCAGTCTGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: ALTPSRPLINTMRQVGDNVTDGC*WQSGHC
Trigger: ACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTAC...GTTGTCACCCACCTGTCTCATAGTGTTTATAAGTGGCCTGCTGGGAGTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp TGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAGGGAGAGGCTGCATCAAAGACTGAGTaGATGAAGTTGATCTCCTCG +
Preference number: 4 (lower is better)
Translates to: CVTDGCCWQSGHCQEGEAASKTE*MKLISS
Trigger: CGAGGAGATCAACTTCATCCACTCAGTCTTTGATGC...AGCCTCTCCCTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp ACTATGAGACAGGTGGGTGACAACCTGGCATTGAGAGACTCCCCAGCCTCTGCATCAGCAATGGCCGTTTaGAAGCTGGAACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: TMRQVGDNLALRDSPASASAMAV*KLEHCF
Trigger: GAAGCAGTGTTCCAGCTTGCAAACGGCCATTGCTGA...TGCAGAGGCTGGGGAGTCTCTCAATGCCAGGTTGTCACCCACCTGTCTCATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp ATGAGAGCCTTAGGAGAGAGCAGGCTTTGGTTTCACATGTGTAACAGACGGGTGGAAGGAGGAGGACCCTaGTGTCCAGGTGTGACTGCA +
Preference number: 4 (lower is better)
Translates to: MRALGESRLWFHMCNRRVEGGGP*CPGVTA
Trigger: TGCAGTCACACCTGGACACCAGGGTCCTCCTCCTTC...CACCCGTCTGTTACACATGTGAAACCAAAGCCTGCTCTCTCCTAAGGCTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp ATGAGAGCCTTAGGAGAGAGCAGGCTTTGGTTTCACATGTGTAACAGACGGGTGTTCCACCTCCAATGCTaGTGCCGCTTCCATAGCCAC +
Preference number: 4 (lower is better)
Translates to: MRALGESRLWFHMCNRRVFHLQC*CRFHSH
Trigger: GTGGCTATGGAAGCGGCAGCAGCATTGGAGGTGGAA...CACCCGTCTGTTACACATGTGAAACCAAAGCCTGCTCTCTCCTAAGGCTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR TCA 90 bp ATAAACACTATGAGACAGGTGGGTGACAACCTGGCATTGAGAGACTCCCCAGCCAGCCAAATCCACTGTTaGCTCCAAACCTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: INTMRQVGDNLALRDSPASQIHC*LQTCCW
Trigger: CCAGCAACAGGTTTGGAGTCAACAGTGGATTTGGCT...GGCTGGGGAGTCTCTCAATGCCAGGTTGTCACCCACCTGTCTCATAGTGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR GCA 90 bp AGAGGGAGCACTCACTCCCAGCAGGCCACTTATAAACACTATGAGACAGGTGGGTCTTCCACAACATCCTaGATGTTCCTCAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RGSTHSQQATYKHYETGGSSTTS*MFLSSA
Trigger: AGCTGAACTGAGGAACATGCAGGATGTTGTGGAAGA...CCCACCTGTCTCATAGTGTTTATAAGTGGCCTGCTGGGAGTGAGTGCTCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp ACACATGCATTTAATAGACACATTCCAGGGAGGGAACAGAGGGAGCACTCACTCGCTCTGCATCAGCAATaGCCGTTTGCAAGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: THAFNRHIPGREQREHSLALHQQ*PFASWN
Trigger: GTTCCAGCTTGCAAACGGCCATTGCTGATGCAGAGC...GAGTGAGTGCTCCCTCTGTTCCCTCCCTGGAATGTGTCTATTAAATGCATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp GCACTCACTCCCAGCAGGCCACTTATAAACACTATGAGACAGGTGGGTGACAACCACAGAAATGTTAACTaGAGAAACTCCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: ALTPSRPLINTMRQVGDNHRNVN*RNSLST
Trigger: AGTGGAGAGGGAGTTTCTCCAGTTAACATTTCTGTG...GTTGTCACCCACCTGTCTCATAGTGTTTATAAGTGGCCTGCTGGGAGTGAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CCA 90 bp AGGCCACTTATAAACACTATGAGACAGGTGGGTGACAACCTGGCATTGAGAGACCAGAGATCTCTTGTTTaGTGTTTCGAAGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: RPLINTMRQVGDNLALRDQRSLV*CFEGHP
Trigger: GGGATGACCTTCGAAACACCAAACAAGAGATCTCTG...GTCTCTCAATGCCAGGTTGTCACCCACCTGTCTCATAGTGTTTATAAGTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS TCA 90 bp CAGAACCTCCCAGGCCTGCACCCAGGCTATGCCCACCACTGGTGGTaGAGGAGTAGCCGCTGCCCCCACCGAGGCCCAGGTTTCCACCTC +
Preference number: 5 (lower is better)
Translates to: QNLPGLHPGYAHHWW*RSSRCPHRGPGFHL
Trigger: GAGGTGGAAACCTGGGCCTCGGTGGGGGCAGCGGCTACTCCTTCACCACCAGTGGTGGGCATAGCCTGGGTGCAGGCCTGGGAGGTTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CAA 90 bp CTGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGCTGCCTTGGCCCGTGCATCCTaGAGAGCCAGTTCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: LHLEGGREVELEEDFPAALARAS*RASSPR
Trigger: GCGGGGAGAACTGGCTCTCAAGGATGCACGGGCCAA...GGCAGCTGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CAA 90 bp TGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAGGGAGAGGCTGGCTGCTGCCACACCCATaGATGGAGACCCGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: CNRRVLLAVWALSGGRGWLLPHP*METRLA
Trigger: TGCCAAGCGGGTCTCCATCAATGGGTGTGGCAGCAG...CCAGCCTCTCCCTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CAA 90 bp TGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAGGGAGAGGCTCCCCCTAAGCCCCGGTaGCTGGTGGCACTGAATCCA +
Preference number: 5 (lower is better)
Translates to: CVTDGCCWQSGHCQEGEAPPKPR*LVALNP
Trigger: TGGATTCAGTGCCACCAGCAACCGGGGCTTAGGGGG...AGCCTCTCCCTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CAA 90 bp AGCCTCTGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGTTGACTCCAAACCTGTaGCTGGCCCTGCCACCAAAG +
Preference number: 5 (lower is better)
Translates to: SLCIWREGGRWSWRRTFQLTPNL*LALPPK
Trigger: CTTTGGTGGCAGGGCCAGCAACAGGTTTGGAGTCAA...CTGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCAGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CAA 90 bp CAGCCTCTGCATCTGGAGGGAGGGAGGGAGGTGGAGCTGGAGGAGGACTTTCCAGGCAGAGATTTGACCTaGGCTTCCAGCTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: QPLHLEGGREVELEEDFPGRDLT*ASSSTL
Trigger: CAAGGTGGAGCTGGAAGCCAAGGTCAAATCTCTGCC...TGGAAAGTCCTCCTCCAGCTCCACCTCCCTCCCTCCCTCCAGATGCAGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CAA 90 bp ACTATGAGACAGGTGGGTGACAACCTGGCATTGAGAGACTCCCCAGCCTCTGCATCCTCGGGCAGAGATTaGACCTTGGCTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TMRQVGDNLALRDSPASASSGRD*TLASSS
Trigger: GGAGCTGGAAGCCAAGGTCAAATCTCTGCCCGAGGA...TGCAGAGGCTGGGGAGTCTCTCAATGCCAGGTTGTCACCCACCTGTCTCATAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CAA 90 bp TGTGTAACAGACGGGTGCTGCTGGCAGTCTGGGCACTGTCAGGAGGGAGAGGCTATCAGCAATGGCCGTTaGCAAGCTGGAACACTGCTT +
Preference number: 5 (lower is better)
Translates to: CVTDGCCWQSGHCQEGEAISNGR*QAGTLL
Trigger: AAGCAGTGTTCCAGCTTGCAAACGGCCATTGCTGAT...AGCCTCTCCCTCCTGACAGTGCCCAGACTGCCAGCAGCACCCGTCTGTTACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS TCA 90 bp CCTGCATGTTCCTCAGTTCAGCTTCAAGCCTGCCCCTCTCGGTGGTaGTGCTTTCCAGCTGCCGTCGGAGCTCACTGGTATAGGAATCAA +
Preference number: 5 (lower is better)
Translates to: PACSSVQLQACPSRW*CFPAAVGAHWYRNQ
Trigger: TTGATTCCTATACCAGTGAGCTCCGACGGCAGCTGGAAAGCATCACCACCGAGAGGGGCAGGCTTGAAGCTGAACTGAGGAACATGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CAA 90 bp ATGAGAGCCTTAGGAGAGAGCAGGCTTTGGTTTCACATGTGTAACAGACGGGTGTCAAGGTCCACCAGCTaGGCCCGTGCATCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: MRALGESRLWFHMCNRRVSRSTS*ARASLR
Trigger: TCTCAAGGATGCACGGGCCAAGCTGGTGGACCTTGA...CACCCGTCTGTTACACATGTGAAACCAAAGCCTGCTCTCTCCTAAGGCTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CAA 90 bp ATAAACACTATGAGACAGGTGGGTGACAACCTGGCATTGAGAGACTCCCCAGCCGTGGTGGAGACAAACTaGACGCTAGAACCACTGCCC +
Preference number: 5 (lower is better)
Translates to: INTMRQVGDNLALRDSPAVVETN*TLEPLP
Trigger: GGGCAGTGGTTCTAGCGTCAAGTTTGTCTCCACCAC...GGCTGGGGAGTCTCTCAATGCCAGGTTGTCACCCACCTGTCTCATAGTGTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CAA 90 bp ATGAGAGCCTTAGGAGAGAGCAGGCTTTGGTTTCACATGTGTAACAGACGGGTGACTGAGTGGATGAAGTaGATCTCCTCGGGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: MRALGESRLWFHMCNRRVTEWMK*ISSGRD
Trigger: ATCTCTGCCCGAGGAGATCAACTTCATCCACTCAGT...CACCCGTCTGTTACACATGTGAAACCAAAGCCTGCTCTCTCCTAAGGCTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CAA 90 bp AGGCCACTTATAAACACTATGAGACAGGTGGGTGACAACCTGGCATTGAGAGACGGCAATGTCCTCGTATaGTGCTTTGACCTCGGCGAT +
Preference number: 5 (lower is better)
Translates to: RPLINTMRQVGDNLALRDGNVLV*CFDLGD
Trigger: ATCGCCGAGGTCAAAGCACAATACGAGGACATTGCC...GTCTCTCAATGCCAGGTTGTCACCCACCTGTCTCATAGTGTTTATAAGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CAA 90 bp AGAGGGAGCACTCACTCCCAGCAGGCCACTTATAAACACTATGAGACAGGTGGGTCTTCGTACCTGACTTaGAAATCTTCCACAACATCC +
Preference number: 5 (lower is better)
Translates to: RGSTHSQQATYKHYETGGSSYLT*KSSTTS
Trigger: GGATGTTGTGGAAGATTTCAAAGTCAGGTACGAAGA...CCCACCTGTCTCATAGTGTTTATAAGTGGCCTGCTGGGAGTGAGTGCTCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS-3UTR CAA 90 bp ACACATGCATTTAATAGACACATTCCAGGGAGGGAACAGAGGGAGCACTCACTCCTGGAACACTGCTTCTaGACGCTGTCAATCTCAGCT +
Preference number: 5 (lower is better)
Translates to: THAFNRHIPGREQREHSLLEHCF*TLSISA
Trigger: AGCTGAGATTGACAGCGTCAAGAAGCAGTGTTCCAG...GAGTGAGTGCTCCCTCTGTTCCCTCCCTGGAATGTGTCTATTAAATGCATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS TCA 72 bp CCAGGCCTGCACCCAGGCTATGCCCACCACTGGTGGTaGAGGAGTAGCCGCTGCCCCCACCGAGGCCCAGGT +
Preference number: 6 (lower is better)
Translates to: PGLHPGYAHHWW*RSSRCPHRGPG
Trigger: ACCTGGGCCTCGGTGGGGGCAGCGGCTACTCCTTCACCACCAGTGGTGGGCATAGCCTGGGTGCAGGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS GCA 72 bp CCCCTGCGGCTGCCAGACTGGAAGGTGATGGAGGACTaGCGAGACATGGTGGGTGAGGAAGGCCGGCGAGAA +
Preference number: 6 (lower is better)
Translates to: PLRLPDWKVMED*RDMVGEEGRRE
Trigger: TTCTCGCCGGCCTTCCTCACCCACCATGTCTCGGCAGTCCTCCATCACCTTCCAGTCTGGCAGCCGCAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS TCA 72 bp CTGGAAGGTGATGGAGGACTGCCGAGACATGGTGGGTaGGGAAGGCCGGCGAGAAGGCACCTGAGGTGGGCT +
Preference number: 6 (lower is better)
Translates to: LEGDGGLPRHGG*GRPARRHLRWA
Trigger: AGCCCACCTCAGGTGCCTTCTCGCCGGCCTTCCTCACCCACCATGTCTCGGCAGTCCTCCATCACCTTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS TCA 72 bp AACCACTGCCCCCTAAGCCCCGGTTGCTGGTGGCACTaGATCCAGAACCTCCCAGGCCTGCACCCAGGCTAT +
Preference number: 6 (lower is better)
Translates to: NHCPLSPGCWWH*IQNLPGLHPGY
Trigger: ATAGCCTGGGTGCAGGCCTGGGAGGTTCTGGATTCAGTGCCACCAGCAACCGGGGCTTAGGGGGCAGTGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS CAA 90 bp GTGGAGACAAACTTGACGCTAGAACCACTGCCCCCTAAGCCCCGGTaGCTGGTGGCACTGAATCCAGAACCTCCCAGGCCTGCACCCAGG +
Preference number: 6 (lower is better)
Translates to: VETNLTLEPLPPKPR*LVALNPEPPRPAPR
Trigger: CCTGGGTGCAGGCCTGGGAGGTTCTGGATTCAGTGCCACCAGCAACCGGGGCTTAGGGGGCAGTGGTTCTAGCGTCAAGTTTGTCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS GCA 72 bp GTTGCTGGTGGCACTGAATCCAGAACCTCCCAGGCCTaGACCCAGGCTATGCCCACCACTGGTGGTGAAGGA +
Preference number: 6 (lower is better)
Translates to: VAGGTESRTSQA*TQAMPTTGGEG
Trigger: TCCTTCACCACCAGTGGTGGGCATAGCCTGGGTGCAGGCCTGGGAGGTTCTGGATTCAGTGCCACCAGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS CAA 72 bp AACTTGACGCTAGAACCACTGCCCCCTAAGCCCCGGTaGCTGGTGGCACTGAATCCAGAACCTCCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: NLTLEPLPPKPR*LVALNPEPPRP
Trigger: AGGCCTGGGAGGTTCTGGATTCAGTGCCACCAGCAACCGGGGCTTAGGGGGCAGTGGTTCTAGCGTCAAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS TCA 72 bp TCCTCAGTTCAGCTTCAAGCCTGCCCCTCTCGGTGGTaGTGCTTTCCAGCTGCCGTCGGAGCTCACTGGTAT +
Preference number: 6 (lower is better)
Translates to: SSVQLQACPSRW*CFPAAVGAHWY
Trigger: ATACCAGTGAGCTCCGACGGCAGCTGGAAAGCATCACCACCGAGAGGGGCAGGCTTGAAGCTGAACTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS CCA 72 bp GTCTGCAACTGGGACAGCTCTGCATCAAAGACTGAGTaGATGAAGTTGATCTCCTCGGGCAGAGATTTGACC +
Preference number: 6 (lower is better)
Translates to: VCNWDSSASKTE*MKLISSGRDLT
Trigger: GGTCAAATCTCTGCCCGAGGAGATCAACTTCATCCACTCAGTCTTTGATGCAGAGCTGTCCCAGTTGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6
CDS CAA 72 bp TGGGACAGCTCTGCATCAAAGACTGAGTGGATGAAGTaGATCTCCTCGGGCAGAGATTTGACCTTGGCTTCC +
Preference number: 6 (lower is better)
Translates to: WDSSASKTEWMK*ISSGRDLTLAS
Trigger: GGAAGCCAAGGTCAAATCTCTGCCCGAGGAGATCAACTTCATCCACTCAGTCTTTGATGCAGAGCTGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252245.6