Pregenerated sensors for KRT7 (Homo sapiens)
Ensembl gene IDs: ENSG00000135480Ensembl transcript IDs: ENST00000331817.6, ENST00000546666.1, ENST00000546856.5, ENST00000547613.1, ENST00000548088.1, ENST00000548657.5, ENST00000549127.5, ENST00000549638.1, ENST00000550153.1, ENST00000551130.1, ENST00000552183.1, ENST00000552322.5, ENST00000552400.1, ENST00000638501.1
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATCACTCAGGCCTCAGAATGAGGCTGCTTTATTGGAAGCTATTCTaGCATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCATG | + |
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Preference number: 1 (lower is better) Translates to: DHSGLRMRLLYWKLF*HHFPDCLTVLGPGM Trigger: CATGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAATAAAGCAGCCTCATTCTGAGGCCTGAGTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCAGTGGGAATCTTCTTGTaGTTGTGGGTGGTGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: GSYSDITFQTVSLSWDQAVGIFL*LWVVAG Trigger: TCCAGCCACCACCCACAATCACAAGAAGATTCCCAC...TGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGTCTTGTGATTGTGGGTaGTGGCTGGAGGAGTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: CFIGSYSDITFQTVSLSWSCDCG*WLEEWS Trigger: ACTCCACTCCTCCAGCCACCACCCACAATCACAAGA...CCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAATAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | GGACCAGGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCGGCCGTAGAGGCTGCTaGTGCCAAGGCCGCCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GPGMGGRGGNLLVIVGGGGRRGC*CQGRRG Trigger: GCCCCGGCGGCCTTGGCAGCAGCAGCCTCTACGGCC...GCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCCTGGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | GGACCAGGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTCCTGGCGCACCCGCTaGAGGGAGGGGTCGGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: GPGMGGRGGNLLVIVGGGSWRTR*REGSAS Trigger: GGACGCCGACCCCTCCCTCCAGCGGGTGCGCCAGGA...GCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCCTGGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | GGACCAGGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCCGAGGCCGTAGAGGCTaGTGCTGCCAAGGCCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GPGMGGRGGNLLVIVGGGRGRRG*CCQGRR Trigger: CCGGCGGCCTTGGCAGCAGCAGCCTCTACGGCCTCG...GCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCCTGGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | GGACCAGGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCCGGAGGTCGTCCCCATaGTTCCCAGCCTGGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GPGMGGRGGNLLVIVGGGRRSSP*FPAWAW Trigger: CCAGGCCCAGGCTGGGAAGCATGGGGACGACCTCCG...GCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCCTGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | AGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGAGTGGAGTGAGCTCAGGCGCACCTaGGCGCCGCGGCCCGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: RQGWESSCDCGWWLEEWSELRRT*APRPEK Trigger: CTTCTCGGGCCGCGGCGCCCAGGTGCGCCTGAGCTC...ACTCCACTCCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | AGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGAGTGGAGTAGTCGCGGGCACTCCTaGGACTGGCGGATGCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RQGWESSCDCGWWLEEWSSRGHS*DWRMRS Trigger: GGACCGCATCCGCCAGTCGCAGGAGTGCCCGCGACT...ACTCCACTCCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | GGACCAGGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCGCCGACTTCTGCTCCTaGAGCAGCGTCCACTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: GPGMGGRGGNLLVIVGGGADFCS*SSVHLV Trigger: GACCAAGTGGACGCTGCTGCAGGAGCAGAAGTCGGC...GCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCCTGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | GGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGAGTGGATGGACATGGTaGCTGGGCCGGGATGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: GMGGRGGNLLVIVGGGWRSGWTW*LGRDGP Trigger: AGGTCCATCCCGGCCCAGCCACCATGTCCATCCACT...CCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | GGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGGGCCTCAAAGATGTCTaGGAGGCGGCTGCTCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: GMGGRGGNLLVIVGGGWRGLKDV*EAAALG Trigger: GCCAAGAGCAGCCGCCTCCCAGACATCTTTGAGGCC...CCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | AGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGAGTGGAGTGGGCATTGCTGCCCATaGTTCCCCCGAGGGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RQGWESSCDCGWWLEEWSGHCCP*FPRGSA Trigger: GGCTGACCCTCGGGGGAACCATGGGCAGCAATGCCC...ACTCCACTCCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | AGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGAGTGGAGTAGCTCAGGGCATTGCTaGCCATGGTTCCCCCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RQGWESSCDCGWWLEEWSSSGHC*PWFPRG Trigger: CCCTCGGGGGAACCATGGGCAGCAATGCCCTGAGCT...ACTCCACTCCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | GGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGAGAAGCTCAGGGCATTaGTGCCCATGGTTCCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: GMGGRGGNLLVIVGGGWRRSSGH*CPWFPR Trigger: TCGGGGGAACCATGGGCAGCAATGCCCTGAGCTTCT...CCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | AGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGAGTGGAGTCCCATCCACCTGCAGTaGCTCAAGCTGACCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: RQGWESSCDCGWWLEEWSPIHLQ*LKLTPK Trigger: CTTCGGGGTCAGCTTGAGGCACTGCAGGTGGATGGG...ACTCCACTCCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | GGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGCAATGCCACCGCCACTaGTACTGCCACCAGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GMGGRGGNLLVIVGGGWRQCHRH*YCHQWN Trigger: ATTCCACTGGTGGCAGTAGCAGTGGCGGTGGCATTG...CCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | AGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGAGTGGAGTCCATGCTTCCCAGCCTaGGCCTGGAGGGTCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQGWESSCDCGWWLEEWSPCFPA*AWRVSN Trigger: GTTTGAGACCCTCCAGGCCCAGGCTGGGAAGCATGG...ACTCCACTCCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | AGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGAGTGGAGTCAGGACCCGCACTGCTaGAGAAGCTCAGGGCATTGC | + |
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Preference number: 4 (lower is better) Translates to: RQGWESSCDCGWWLEEWSQDPHC*RSSGHC Trigger: GCAATGCCCTGAGCTTCTCCAGCAGTGCGGGTCCTG...ACTCCACTCCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | GAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCATCGTAGAGGCTGCTGCTaGCAAGGCCGCCGGGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: EAILTSLSRLSHCLGTRHRRGCC*QGRRGE Trigger: CTCGCCCCGGCGGCCTTGGCAGCAGCAGCCTCTACG...ATGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | GGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGGGAGGGTCTCAAACTTaGTCTGGTACCAGGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GMGGRGGNLLVIVGGGWRGGSQT*SGTRLQ Trigger: CTGAAGCCTGGTACCAGACCAAGTTTGAGACCCTCC...CCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | GGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGTCTTGTGATTGTGGGTaGTGGCTGGAGGAGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GMGGRGGNLLVIVGGGWRSCDCG*WLEEWS Trigger: ACTCCACTCCTCCAGCCACCACCCACAATCACAAGA...CCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | GGACCAGGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCCATGGGAGGCAGGGGTaGGAATCTTCTTGTGATTGT | + |
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Preference number: 4 (lower is better) Translates to: GPGMGGRGGNLLVIVGGGHGRQG*ESSCDC Trigger: ACAATCACAAGAAGATTCCCACCCCTGCCTCCCATG...GCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCCTGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | GGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCATCCTCCACCACATCCTaGATGCTCCGCAGCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: GSYSDITFQTVSLSWDQASSTTS*MLRSSA Trigger: GGCGGAGCTGCGGAGCATGCAGGATGTGGTGGAGGA...TGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | AGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGAGTGGAGTCACCGCCACTGCTACTaGCACCAGTGGAATTCATCA | + |
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Preference number: 4 (lower is better) Translates to: RQGWESSCDCGWWLEEWSHRHCY*HQWNSS Trigger: TGATGAATTCCACTGGTGGCAGTAGCAGTGGCGGTG...ACTCCACTCCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR TCA 90 bp | GGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCATGCAGTGCCTCAAGCTaGCCCCGAAGGCCAGCAATC | + |
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Preference number: 4 (lower is better) Translates to: GSYSDITFQTVSLSWDQACSASS*PRRPAI Trigger: GATTGCTGGCCTTCGGGGTCAGCTTGAGGCACTGCA...TGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | GAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCATGATGGACATGGTGGCTaGGCCGGGATGGACCTAGCG | + |
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Preference number: 4 (lower is better) Translates to: EAILTSLSRLSHCLGTRHDGHGG*AGMDLA Trigger: CGCTAGGTCCATCCCGGCCCAGCCACCATGTCCATC...ATGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | ATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGTGGTGGCTGGAGGAGTaGAGTGGTGGGAGGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: IGSYSDITFQTVSLSWDQWWLEE*SGGRRL Trigger: GAGCCGCCTCCCACCACTCCACTCCTCCAGCCACCA...CTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | GGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCATCTTGGGACCAGGCATaGGAGGCAGGGGTGGGAATC | + |
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Preference number: 4 (lower is better) Translates to: GSYSDITFQTVSLSWDQASWDQA*EAGVGI Trigger: GATTCCCACCCCTGCCTCCCATGCCTGGTCCCAAGA...TGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR TCA 90 bp | TGCTTTATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGCCCGAGAAGGCGGCTaGGCGCGAGGTGAATACCGG | + |
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Preference number: 4 (lower is better) Translates to: CFIGSYSDITFQTVSLSWAREGG*ARGEYR Trigger: CCGGTATTCACCTCGCGCTCAGCCGCCTTCTCGGGC...CCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAATAAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | GAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCATTGTCTGGGAGGCGGCTaGTCTTGGCCGACTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: EAILTSLSRLSHCLGTRHCLGGG*SWPTSA Trigger: AGCAGAAGTCGGCCAAGAGCAGCCGCCTCCCAGACA...ATGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | ATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGCCACCACATCCTGCATaGTCCGCAGCTCCGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IGSYSDITFQTVSLSWDQPPHPA*SAAPPP Trigger: TGGAGGCGGAGCTGCGGAGCATGCAGGATGTGGTGG...CTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | ATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGGAGGCGGCTGCTCTTaGCCGACTTCTGCTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: IGSYSDITFQTVSLSWDQGGGCS*PTSAPA Trigger: TGCAGGAGCAGAAGTCGGCCAAGAGCAGCCGCCTCC...CTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | GGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCATCGGAGATCTGGGACTaGAGCTCTGTCAACTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: GSYSDITFQTVSLSWDQASEIWD*SSVNSV Trigger: GACGGAGTTGACAGAGCTGCAGTCCCAGATCTCCGA...TGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR TCA 90 bp | GGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCATGGCACGCTGGTTCTTaGTGTTGTCGATCTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GSYSDITFQTVSLSWDQAWHAGS*CCRSQP Trigger: AGGCTGAGATCGACAACATCAAGAACCAGCGTGCCA...TGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | ATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCTTCCAGCTCCTCCTaGTTGGCACGAGCATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: IGSYSDITFQTVSLSWDQASSSS*LARASL Trigger: CAAGGATGCTCGTGCCAAGCAGGAGGAGCTGGAAGC...CTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | TGCTTTATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGCGAGGGTCAGCCCAATaGCACCGCCACTGCTACTGC | + |
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Preference number: 4 (lower is better) Translates to: CFIGSYSDITFQTVSLSWRGSAQ*HRHCYC Trigger: GCAGTAGCAGTGGCGGTGGCATTGGGCTGACCCTCG...CCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAATAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | TGCTTTATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGCCCAGGACCCGCACTaGTGGAGAAGCTCAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: CFIGSYSDITFQTVSLSWAQDPH*WRSSGH Trigger: ATGCCCTGAGCTTCTCCAGCAGTGCGGGTCCTGGGC...CCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAATAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | GAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCATACTGTCTCACTGTCTTaGGACCAGGCATGGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: EAILTSLSRLSHCLGTRHTVSLS*DQAWEA Trigger: TGCCTCCCATGCCTGGTCCCAAGACAGTGAGACAGT...ATGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | TGCTTTATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGCTCTTGGCCGACTTCTaGTCCTGCAGCAGCGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: CFIGSYSDITFQTVSLSWLLADF*SCSSVH Trigger: GTGGACGCTGCTGCAGGAGCAGAAGTCGGCCAAGAG...CCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAATAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR GCA 90 bp | TGCTTTATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGCCTGCGACTGGCGGATaGGGTCCGGATGGAATAAGC | + |
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Preference number: 4 (lower is better) Translates to: CFIGSYSDITFQTVSLSWPATGG*GPDGIS Trigger: GCTTATTCCATCCGGACCGCATCCGCCAGTCGCAGG...CCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAATAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | ATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGCGAAGGCCAGCAATCTaGGCCTCAAAGATGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: IGSYSDITFQTVSLSWDQRRPAI*ASKMSG Trigger: CCCAGACATCTTTGAGGCCCAGATTGCTGGCCTTCG...CTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | ATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGTGTGATTGTGGGTGGTaGCTGGAGGAGTGGAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: IGSYSDITFQTVSLSWDQCDCGW*LEEWSG Trigger: ACCACTCCACTCCTCCAGCCACCACCCACAATCACA...CTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR TCA 90 bp | ATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGTGGGAATCTTCTTGTaGTTGTGGGTGGTGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: IGSYSDITFQTVSLSWDQVGIFL*LWVVAG Trigger: TCCAGCCACCACCCACAATCACAAGAAGATTCCCAC...CTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR TCA 90 bp | GAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCATACTCAGGCCTCAGAATaGGGCTGCTTTATTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: EAILTSLSRLSHCLGTRHTQASE*GCFIGS Trigger: GCTTCCAATAAAGCAGCCTCATTCTGAGGCCTGAGT...ATGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | TGCTTTATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGTTCCCAGCCTGGGCCTaGAGGGTCTCAAACTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CFIGSYSDITFQTVSLSWFPAWA*RVSNLV Trigger: GACCAAGTTTGAGACCCTCCAGGCCCAGGCTGGGAA...CCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAATAAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | GGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCATCCAACTTGGCACGCTaGTTCTTGATGTTGTCGATC | + |
|
Preference number: 4 (lower is better) Translates to: GSYSDITFQTVSLSWDQASNLAR*FLMLSI Trigger: GATCGACAACATCAAGAACCAGCGTGCCAAGTTGGA...TGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CCA 90 bp | TGCTTTATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGCGGATGCGGTCCGGATaGAATAAGCCTTCAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CFIGSYSDITFQTVSLSWRMRSG*NKPSGA Trigger: GGCTCCTGAAGGCTTATTCCATCCGGACCGCATCCG...CCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAATAAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR TCA 90 bp | ATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGGCCCGGTTCATCTCTaGAATCTCATTCCGGGTATT | + |
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Preference number: 4 (lower is better) Translates to: IGSYSDITFQTVSLSWDQGPVHL*NLIPGI Trigger: AATACCCGGAATGAGATTTCAGAGATGAACCGGGCC...CTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS GCA 90 bp | CGGCCACGCGCGGCCGTGAGGCGCCGAGGCCGTAGAGGCTGCTGCTaGCAAGGCCGCCGGGGCGAGCGGAGCTCAGGCGCACCTGGGCGC | + |
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Preference number: 5 (lower is better) Translates to: RPRAAVRRRGRRGCC*QGRRGERSSGAPGR Trigger: GCGCCCAGGTGCGCCTGAGCTCCGCTCGCCCCGGCGGCCTTGGCAGCAGCAGCCTCTACGGCCTCGGCGCCTCACGGCCGCGCGTGGCCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS TCA 90 bp | GCCCACCGGGCCCCCATAGGCAGAGCGCACGGCCACGCGCGGCCGTaGGGCGCCGAGGCCGTAGAGGCTGCTGCTGCCAAGGCCGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AHRAPIGRAHGHARP*GAEAVEAAAAKAAG Trigger: CCCGGCGGCCTTGGCAGCAGCAGCCTCTACGGCCTCGGCGCCTCACGGCCGCGCGTGGCCGTGCGCTCTGCCTATGGGGGCCCGGTGGGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS GCA 90 bp | GCACGGCCACGCGCGGCCGTGAGGCGCCGAGGCCGTAGAGGCTGCTaGTGCCAAGGCCGCCGGGGCGAGCGGAGCTCAGGCGCACCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ARPRAAVRRRGRRGC*CQGRRGERSSGAPG Trigger: CCCAGGTGCGCCTGAGCTCCGCTCGCCCCGGCGGCCTTGGCAGCAGCAGCCTCTACGGCCTCGGCGCCTCACGGCCGCGCGTGGCCGTGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS GCA 90 bp | AGCGCACGGCCACGCGCGGCCGTGAGGCGCCGAGGCCGTAGAGGCTaGTGCTGCCAAGGCCGCCGGGGCGAGCGGAGCTCAGGCGCACCT | + |
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Preference number: 5 (lower is better) Translates to: SARPRAAVRRRGRRG*CCQGRRGERSSGAP Trigger: AGGTGCGCCTGAGCTCCGCTCGCCCCGGCGGCCTTGGCAGCAGCAGCCTCTACGGCCTCGGCGCCTCACGGCCGCGCGTGGCCGTGCGCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS CCA 90 bp | GCCCGCCCGCCCCGCCGAAGCCCAGGCTTTCAGTCCAAGCAGGGATaGTCCGGAGTAGGCAGGAGCGCCATCCCGCTCTCCCTCACACCG | + |
|
Preference number: 5 (lower is better) Translates to: ARPPRRSPGFQSKQG*SGVGRSAIPLSLTP Trigger: CGGTGTGAGGGAGAGCGGGATGGCGCTCCTGCCTACTCCGGACCATCCCTGCTTGGACTGAAAGCCTGGGCTTCGGCGGGGCGGGCGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552400.1 |
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| CDS TCA 90 bp | AGCGGAGCTCAGGCGCACCTGGGCGCCGCGGCCCGAGAAGGCGGCTaGGCGCGAGGTGAATACCGGGGAGCTGAAGTGGATGGACATGGT | + |
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Preference number: 5 (lower is better) Translates to: SGAQAHLGAAAREGG*ARGEYRGAEVDGHG Trigger: ACCATGTCCATCCACTTCAGCTCCCCGGTATTCACCTCGCGCTCAGCCGCCTTCTCGGGCCGCGGCGCCCAGGTGCGCCTGAGCTCCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331817.6 ENST00000546666.1 |
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| CDS CCA 90 bp | GCGCGAGGTGAATACCGGGGAGCTGAAGTGGATGGACATGGTGGCTaGGCCGGGATGGACCTAGCGGCGGGCGAGGAGGAGCGCGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ARGEYRGAEVDGHGG*AGMDLAAGEEERAL Trigger: GAGTGCGCGCTCCTCCTCGCCCGCCGCTAGGTCCATCCCGGCCCAGCCACCATGTCCATCCACTTCAGCTCCCCGGTATTCACCTCGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS GCA 90 bp | TCAGGAGCCCAGGACCCGCACTGCTGGAGAAGCTCAGGGCATTGCTaGCCATGGTTCCCCCGAGGGTCAGCCCAATGCCACCGCCACTGC | + |
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Preference number: 5 (lower is better) Translates to: SGAQDPHCWRSSGHC*PWFPRGSAQCHRHC Trigger: GCAGTGGCGGTGGCATTGGGCTGACCCTCGGGGGAACCATGGGCAGCAATGCCCTGAGCTTCTCCAGCAGTGCGGGTCCTGGGCTCCTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000331817.6 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS GCA 90 bp | CCTTCAGGAGCCCAGGACCCGCACTGCTGGAGAAGCTCAGGGCATTaGTGCCCATGGTTCCCCCGAGGGTCAGCCCAATGCCACCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSGAQDPHCWRSSGH*CPWFPRGSAQCHRH Trigger: GTGGCGGTGGCATTGGGCTGACCCTCGGGGGAACCATGGGCAGCAATGCCCTGAGCTTCTCCAGCAGTGCGGGTCCTGGGCTCCTGAAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000331817.6 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS CCA 90 bp | GCCCAGGACCCGCACTGCTGGAGAAGCTCAGGGCATTGCTGCCCATaGTTCCCCCGAGGGTCAGCCCAATGCCACCGCCACTGCTACTGC | + |
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Preference number: 5 (lower is better) Translates to: AQDPHCWRSSGHCCP*FPRGSAQCHRHCYC Trigger: GCAGTAGCAGTGGCGGTGGCATTGGGCTGACCCTCGGGGGAACCATGGGCAGCAATGCCCTGAGCTTCTCCAGCAGTGCGGGTCCTGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000331817.6 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS CCA 90 bp | CGGCTCAGTCGCGGGCACTCCTGCGACTGGCGGATGCGGTCCGGATaGAATAAGCCTTCAGGAGCCCAGGACCCGCACTGCTGGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLSRGHSCDWRMRSG*NKPSGAQDPHCWRS Trigger: GCTTCTCCAGCAGTGCGGGTCCTGGGCTCCTGAAGGCTTATTCCATCCGGACCGCATCCGCCAGTCGCAGGAGTGCCCGCGACTGAGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000331817.6 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS CCA 90 bp | CCCGAGAAGGCGGCTGAGCGCGAGGTGAATACCGGGGAGCTGAAGTaGATGGACATGGTGGCTGGGCCGGGATGGACCGCTCTCCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PEKAAEREVNTGELK*MDMVAGPGWTALPH Trigger: GTGAGGGAGAGCGGTCCATCCCGGCCCAGCCACCATGTCCATCCACTTCAGCTCCCCGGTATTCACCTCGCGCTCAGCCGCCTTCTCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546666.1 |
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| CDS TCA 90 bp | AGCTCCGCCTCCAGGCGGCCCCCATCCACCTGCAGTGCCTCAAGCTaGCCCCGAAGGCCAGCAATCTGGGCCTCAAAGATGTCTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSASRRPPSTCSASS*PRRPAIWASKMSGR Trigger: CCTCCCAGACATCTTTGAGGCCCAGATTGCTGGCCTTCGGGGTCAGCTTGAGGCACTGCAGGTGGATGGGGGCCGCCTGGAGGCGGAGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331817.6 ENST00000547613.1 |
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| CDS CCA 90 bp | ACCTGGGGGCAGAGGACAGACAGTGAGGACGGCTCTTTCCTAGCGTaGGAGGGAAGCGCTCTCAGCCCTCTCTCCTTCCAGGCCCCAAGC | + |
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Preference number: 5 (lower is better) Translates to: TWGQRTDSEDGSFLA*EGSALSPLSFQAPS Trigger: GCTTGGGGCCTGGAAGGAGAGAGGGCTGAGAGCGCTTCCCTCCCACGCTAGGAAAGAGCCGTCCTCACTGTCTGTCCTCTGCCCCCAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000549638.1 |
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| CDS-3UTR CAA 90 bp | GGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGGGGAGGCGGCTGCTCTaGGCCGACTTCTGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GMGGRGGNLLVIVGGGWRGRRLL*ADFCSC Trigger: GCAGGAGCAGAAGTCGGCCAAGAGCAGCCGCCTCCC...CCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS GCA 90 bp | ATGCGGTCCGGATGGAATAAGCCTTCAGGAGCCCAGGACCCGCACTaGTGGAGAAGCTCAGGGCATTGCTGCCCATGGTTCCCCCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MRSGWNKPSGAQDPH*WRSSGHCCPWFPRG Trigger: CCCTCGGGGGAACCATGGGCAGCAATGCCCTGAGCTTCTCCAGCAGTGCGGGTCCTGGGCTCCTGAAGGCTTATTCCATCCGGACCGCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000331817.6 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS CCA 90 bp | CGGTCCGGATGGAATAAGCCTTCAGGAGCCCAGGACCCGCACTGCTaGAGAAGCTCAGGGCATTGCTGCCCATGGTTCCCCCGAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSGWNKPSGAQDPHC*RSSGHCCPWFPRGS Trigger: TGACCCTCGGGGGAACCATGGGCAGCAATGCCCTGAGCTTCTCCAGCAGTGCGGGTCCTGGGCTCCTGAAGGCTTATTCCATCCGGACCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000331817.6 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS CCA 90 bp | CTCAAGCTGACCCCGAAGGCCAGCAATCTGGGCCTCAAAGATGTCTaGGAGGCGGCTGCTCTTGGCCGACTTCTGCTCCTGCAGCAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LKLTPKASNLGLKDV*EAAALGRLLLLQQR Trigger: ACGCTGCTGCAGGAGCAGAAGTCGGCCAAGAGCAGCCGCCTCCCAGACATCTTTGAGGCCCAGATTGCTGGCCTTCGGGGTCAGCTTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331817.6 ENST00000547613.1 |
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| CDS CCA 90 bp | AGGCAGCATCCACATCCCACAGGACAGGCTGTGCAGACTTCCTCTTaGACAGCTCAGGCAGGCCTTGGCCAGAGGTCCCCATGGGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: RQHPHPTGQAVQTSS*TAQAGLGQRSPWAA Trigger: AGCAGCCCATGGGGACCTCTGGCCAAGGCCTGCCTGAGCTGTCCAAGAGGAAGTCTGCACAGCCTGTCCTGTGGGATGTGGATGCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547613.1 |
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| CDS TCA 90 bp | ACCACTGGTGCCTGCCAGAACAGTGGGACCCAGGCCCTGAAGGCTTaGGACAAGTTGAGGAGTAAGGGAAGCTGCCACCAAGGACCCTGG | + |
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Preference number: 5 (lower is better) Translates to: TTGACQNSGTQALKA*DKLRSKGSCHQGPW Trigger: CCAGGGTCCTTGGTGGCAGCTTCCCTTACTCCTCAACTTGTCTCAAGCCTTCAGGGCCTGGGTCCCACTGTTCTGGCAGGCACCAGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548088.1 |
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| CDS GCA 90 bp | AGCTCAGGGCATTGCTGCCCATGGTTCCCCCGAGGGTCAGCCCAATaGCACCGCCACTGCTACTGCCACCAGTGGAATTCATCACAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SSGHCCPWFPRGSAQ*HRHCYCHQWNSSQR Trigger: TCTCTGTGATGAATTCCACTGGTGGCAGTAGCAGTGGCGGTGGCATTGGGCTGACCCTCGGGGGAACCATGGGCAGCAATGCCCTGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000331817.6 ENST00000549127.5 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS CCA 90 bp | GGAGGCATGCAGGAAGGGAGTGTTCACCTTGGCCCTTCTATCCACTaGCCACCTGACCCCAGGCAATGTCTCAGGGCCTCCATTTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: GGMQEGSVHLGPSIH*PPDPRQCLRASISH Trigger: GTGGGAAATGGAGGCCCTGAGACATTGCCTGGGGTCAGGTGGCCAGTGGATAGAAGGGCCAAGGTGAACACTCCCTTCCTGCATGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549638.1 |
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| CDS CCA 90 bp | GTGCTGGAGATCTCACAAGGGGGTCTGAGACAGTGGCACCAGCTTTaGCCGGGAGATGGGAACCTCCTGCTCCACATCCTGAGTTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: VLEISQGGLRQWHQL*PGDGNLLLHILSLA Trigger: GGCCAAACTCAGGATGTGGAGCAGGAGGTTCCCATCTCCCGGCCAAAGCTGGTGCCACTGTCTCAGACCCCCTTGTGAGATCTCCAGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551130.1 |
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| CDS-3UTR CAA 90 bp | GGCATGGGAGGCAGGGGTGGGAATCTTCTTGTGATTGTGGGTGGTGGCTGGAGGATGGCGGCCTCCAACTaGGCACGCTGGTTCTTGATG | + |
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Preference number: 5 (lower is better) Translates to: GMGGRGGNLLVIVGGGWRMAASN*ARWFLM Trigger: CATCAAGAACCAGCGTGCCAAGTTGGAGGCCGCCAT...CCTCCAGCCACCACCCACAATCACAAGAAGATTCCCACCCCTGCCTCCCATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS TCA 90 bp | CGATCCAGCTCCTCCTTGAGAGATCAGCTCACTTGTTCAGGGGTCTaGCCCCTCCTGGCCCAGCTAGTTTCCCTGGCTGCGTTCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSSSSLRDQLTCSGV*PLLAQLVSLAAFLP Trigger: AGGAAGGAACGCAGCCAGGGAAACTAGCTGGGCCAGGAGGGGTCAGACCCCTGAACAAGTGAGCTGATCTCTCAAGGAGGAGCTGGATCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546666.1 ENST00000552400.1 |
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| CDS GCA 90 bp | CCATGGTTCCCCCGAGGGTCAGCCCAATGCCACCGCCACTGCTACTaGCACCAGTGGAATTCATCACAGAGATATTCACGGCTCCCACTC | + |
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Preference number: 5 (lower is better) Translates to: PWFPRGSAQCHRHCY*HQWNSSQRYSRLPL Trigger: GAGTGGGAGCCGTGAATATCTCTGTGATGAATTCCACTGGTGGCAGTAGCAGTGGCGGTGGCATTGGGCTGACCCTCGGGGGAACCATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000331817.6 ENST00000549127.5 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS GCA 90 bp | TGCTGCCCATGGTTCCCCCGAGGGTCAGCCCAATGCCACCGCCACTaGTACTGCCACCAGTGGAATTCATCACAGAGATATTCACGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CCPWFPRGSAQCHRH*YCHQWNSSQRYSRL Trigger: GAGCCGTGAATATCTCTGTGATGAATTCCACTGGTGGCAGTAGCAGTGGCGGTGGCATTGGGCTGACCCTCGGGGGAACCATGGGCAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000331817.6 ENST00000549127.5 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS GCA 90 bp | ACACTTCCAGCCTGCCTTCAGCCTTGTAAAAGGAGCGAGGAGGCATaGAGGAAGGGAGTGTTCACCTTGGCCCTTCTATCCACTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLPACLQPCKRSEEA*RKGVFTLALLSTGH Trigger: GTGGCCAGTGGATAGAAGGGCCAAGGTGAACACTCCCTTCCTGCATGCCTCCTCGCTCCTTTTACAAGGCTGAAGGCAGGCTGGAAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549638.1 |
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| CDS GCA 90 bp | TCCTCTGTCCCTGCAATGAATGATGAGCTCCCAGGGACAGCGCCCTaGAGCCAGAACCAGGTGCAAGCAGAGTGCTCAGTATCAATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSVPAMNDELPGTAP*SQNQVQAECSVSMW Trigger: CCACATTGATACTGAGCACTCTGCTTGCACCTGGTTCTGGCTGCAGGGCGCTGTCCCTGGGAGCTCATCATTCATTGCAGGGACAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546856.5 |
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| CDS GCA 90 bp | TTGGGATTTTCTCCAGGGCTGAGCACCACAGACTTAAACCACTGGTaGCTGCCAGAACAGTGGGACCCAGGCCCTGAAGGCTTGAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: LGFSPGLSTTDLNHW*LPEQWDPGPEGLRQ Trigger: TTGTCTCAAGCCTTCAGGGCCTGGGTCCCACTGTTCTGGCAGGCACCAGTGGTTTAAGTCTGTGGTGCTCAGCCCTGGAGAAAATCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548088.1 |
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| CDS CCA 90 bp | ATCTTGGGATTTTCTCCAGGGCTGAGCACCACAGACTTAAACCACTaGTGCCTGCCAGAACAGTGGGACCCAGGCCCTGAAGGCTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ILGFSPGLSTTDLNH*CLPEQWDPGPEGLR Trigger: TCTCAAGCCTTCAGGGCCTGGGTCCCACTGTTCTGGCAGGCACCAGTGGTTTAAGTCTGTGGTGCTCAGCCCTGGAGAAAATCCCAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548088.1 |
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| CDS-3UTR CAA 90 bp | TGCTTTATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACTGTCTCACTGTCTaGGGACCAGGCATGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CFIGSYSDITFQTVSLSWDCLTV*GPGMGG Trigger: GCCTCCCATGCCTGGTCCCAAGACAGTGAGACAGTC...CCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAATAAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CAA 90 bp | TGCTTTATTGGAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGTTGGCACGCTGGTTCTaGATGTTGTCGATCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CFIGSYSDITFQTVSLSWLARWF*MLSISA Trigger: GGCTGAGATCGACAACATCAAGAACCAGCGTGCCAA...CCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTCCAATAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS-3UTR CAA 90 bp | GAAGCTATTCTGACATCACTTTCCAGACTGTCTCACTGTCTTGGGACCAGGCATAATGAGGCTGCTTTATaGGAAGCTATTCTGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: EAILTSLSRLSHCLGTRHNEAAL*EAILTS Trigger: TGATGTCAGAATAGCTTCCAATAAAGCAGCCTCATT...ATGCCTGGTCCCAAGACAGTGAGACAGTCTGGAAAGTGATGTCAGAATAGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS GCA 72 bp | CGCGCGGCCGTGAGGCGCCGAGGCCGTAGAGGCTGCTaGTGCCAAGGCCGCCGGGGCGAGCGGAGCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RAAVRRRGRRGC*CQGRRGERSSG Trigger: GCCTGAGCTCCGCTCGCCCCGGCGGCCTTGGCAGCAGCAGCCTCTACGGCCTCGGCGCCTCACGGCCGCGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS GCA 72 bp | GCGGCCGTGAGGCGCCGAGGCCGTAGAGGCTGCTGCTaGCAAGGCCGCCGGGGCGAGCGGAGCTCAGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: AAVRRRGRRGCC*QGRRGERSSGA Trigger: TGCGCCTGAGCTCCGCTCGCCCCGGCGGCCTTGGCAGCAGCAGCCTCTACGGCCTCGGCGCCTCACGGCCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331817.6 ENST00000546666.1 |
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| CDS TCA 72 bp | GCCCCCATAGGCAGAGCGCACGGCCACGCGCGGCCGTaGGGCGCCGAGGCCGTAGAGGCTGCTGCTGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: APIGRAHGHARP*GAEAVEAAAAK Trigger: CTTGGCAGCAGCAGCCTCTACGGCCTCGGCGCCTCACGGCCGCGCGTGGCCGTGCGCTCTGCCTATGGGGGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000331817.6 |
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| CDS CCA 72 bp | CCCTCGGCCACAGCTCGGTGCCCTGCCCTGTCACACTaGTGCCCCCAGAGCCAACGCCATCCCCGCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PSATARCPALSH*CPQSQRHPRCL Trigger: GAGGCAGCGGGGATGGCGTTGGCTCTGGGGGCACCAGTGTGACAGGGCAGGGCACCGAGCTGTGGCCGAGGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000552183.1 ENST00000552322.5 |
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| CDS GCA 72 bp | TCGGCCACAGCTCGGTGCCCTGCCCTGTCACACTGGTaGCCCCAGAGCCAACGCCATCCCCGCTGCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SATARCPALSHW*PQSQRHPRCLW Trigger: CCAGAGGCAGCGGGGATGGCGTTGGCTCTGGGGGCACCAGTGTGACAGGGCAGGGCACCGAGCTGTGGCCGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000552183.1 ENST00000552322.5 |
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| CDS GCA 72 bp | CAGCTCCGCCTCCAGGCGGCCCCCATCCACCTGCAGTaGCTCAAGCTGACCCCGAAGGCCAGCAATCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QLRLQAAPIHLQ*LKLTPKASNLG Trigger: GCCCAGATTGCTGGCCTTCGGGGTCAGCTTGAGGCACTGCAGGTGGATGGGGGCCGCCTGGAGGCGGAGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000331817.6 ENST00000547613.1 |
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| CDS GCA 72 bp | GGCCCTCTGACACTCTGCCCCTCGGCCACAGCTCGGTaGCCTGCCCTGTCACACTGGTGCCCCCAGAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GPLTLCPSATAR*PALSHWCPQSQ Trigger: TTGGCTCTGGGGGCACCAGTGTGACAGGGCAGGGCACCGAGCTGTGGCCGAGGGGCAGAGTGTCAGAGGGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000552183.1 ENST00000552322.5 |
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| CDS GCA 72 bp | GGCGGCTCAGTCGCGGGCACTCCTGCGACTGGCGGATaGGGTCCGGATGGAATAAGCCTTCAGGAGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GGSVAGTPATGG*GPDGISLQEPR Trigger: CCTGGGCTCCTGAAGGCTTATTCCATCCGGACCGCATCCGCCAGTCGCAGGAGTGCCCGCGACTGAGCCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000331817.6 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS CCA 72 bp | CCCCGCCGAAGCCCAGGCTTTCAGTCCAAGCAGGGATaGTCCGGAGTAGGCAGGAGCGCCATCCCGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PRRSPGFQSKQG*SGVGRSAIPLS Trigger: GGAGAGCGGGATGGCGCTCCTGCCTACTCCGGACCATCCCTGCTTGGACTGAAAGCCTGGGCTTCGGCGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552400.1 |
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| CDS GCA 72 bp | GCCCAGGACCCGCACTGCTGGAGAAGCTCAGGGCATTaGTGCCCATGGTTCCCCCGAGGGTCAGCCCAATGC | + |
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Preference number: 6 (lower is better) Translates to: AQDPHCWRSSGH*CPWFPRGSAQC Trigger: GCATTGGGCTGACCCTCGGGGGAACCATGGGCAGCAATGCCCTGAGCTTCTCCAGCAGTGCGGGTCCTGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000331817.6 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS CCA 72 bp | CCGCACTGCTGGAGAAGCTCAGGGCATTGCTGCCCATaGTTCCCCCGAGGGTCAGCCCAATGCCACCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PHCWRSSGHCCP*FPRGSAQCHRH Trigger: GTGGCGGTGGCATTGGGCTGACCCTCGGGGGAACCATGGGCAGCAATGCCCTGAGCTTCTCCAGCAGTGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000331817.6 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS CCA 72 bp | GGTGGGAGGCGGCTCAGTCGCGGGCACTCCTGCGACTaGCGGATGCGGTCCGGATGGAATAAGCCTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: GGRRLSRGHSCD*RMRSGWNKPSG Trigger: TCCTGAAGGCTTATTCCATCCGGACCGCATCCGCCAGTCGCAGGAGTGCCCGCGACTGAGCCGCCTCCCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000331817.6 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS GCA 72 bp | CAGGACCCGCACTGCTGGAGAAGCTCAGGGCATTGCTaGCCATGGTTCCCCCGAGGGTCAGCCCAATGCCAC | + |
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Preference number: 6 (lower is better) Translates to: QDPHCWRSSGHC*PWFPRGSAQCH Trigger: GTGGCATTGGGCTGACCCTCGGGGGAACCATGGGCAGCAATGCCCTGAGCTTCTCCAGCAGTGCGGGTCCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000331817.6 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS CAA 90 bp | GCTCCTCCCCTCCCCACTCCAGTAGGCATCGGAATCCCAGGGACCTaGGGAATGCTTACCCTGGACCCTCACCTCCCGGACCCTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: APPLPTPVGIGIPGT*GMLTLDPHLPDPPL Trigger: GAGTGGAGGGTCCGGGAGGTGAGGGTCCAGGGTAAGCATTCCCAAGGTCCCTGGGATTCCGATGCCTACTGGAGTGGGGAGGGGAGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552400.1 |
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| CDS GCA 72 bp | ATGGCGGCCTCCAACTTGGCACGCTGTGGGCAGCAGTaGAGCTGTAAGCTGGGGCTCACCAGTCTGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: MAASNLARCGQQ*SCKLGLTSLPS Trigger: GGAAGGCAGACTGGTGAGCCCCAGCTTACAGCTGCACTGCTGCCCACAGCGTGCCAAGTTGGAGGCCGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552322.5 |
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| CDS CAA 72 bp | AGGAGCGAGGAGGCATGCAGGAAGGGAGTGTTCACCTaGGCCCTTCTATCCACTGGCCACCTGACCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RSEEACRKGVFT*ALLSTGHLTPG Trigger: GCCTGGGGTCAGGTGGCCAGTGGATAGAAGGGCCAAGGTGAACACTCCCTTCCTGCATGCCTCCTCGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549638.1 |
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| CDS CAA 72 bp | CTCCCCACTCCAGTAGGCATCGGAATCCCAGGGACCTaGGGAATGCTTACCCTGGACCCTCACCTCCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: LPTPVGIGIPGT*GMLTLDPHLPD Trigger: GTCCGGGAGGTGAGGGTCCAGGGTAAGCATTCCCAAGGTCCCTGGGATTCCGATGCCTACTGGAGTGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552400.1 |
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| CDS GCA 72 bp | CATTGCTGCCCATGGTTCCCCCGAGGGTCAGCCCAATaGCACCGCCACTGCTACTGCCACCAGTGGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: HCCPWFPRGSAQ*HRHCYCHQWNS Trigger: TGAATTCCACTGGTGGCAGTAGCAGTGGCGGTGGCATTGGGCTGACCCTCGGGGGAACCATGGGCAGCAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000331817.6 ENST00000549127.5 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS GCA 72 bp | TCTCCAGGGCTGAGCACCACAGACTTAAACCACTGGTaGCTGCCAGAACAGTGGGACCCAGGCCCTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: SPGLSTTDLNHW*LPEQWDPGPEG Trigger: GCCTTCAGGGCCTGGGTCCCACTGTTCTGGCAGGCACCAGTGGTTTAAGTCTGTGGTGCTCAGCCCTGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548088.1 |
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| CDS CCA 72 bp | CAGAGGACAGACAGTGAGGACGGCTCTTTCCTAGCGTaGGAGGGAAGCGCTCTCAGCCCTCTCTCCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QRTDSEDGSFLA*EGSALSPLSFQ Trigger: CTGGAAGGAGAGAGGGCTGAGAGCGCTTCCCTCCCACGCTAGGAAAGAGCCGTCCTCACTGTCTGTCCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549638.1 |
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| CDS CAA 90 bp | CTCTCCCTCACACCGATCCAGCTCCTCCTTGAGAGATCAGCTCACTaGTTCAGGGGTCTGACCCCTCCTGGCCCAGCTAGTTTCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LSLTPIQLLLERSAH*FRGLTPPGPASFPG Trigger: GCCAGGGAAACTAGCTGGGCCAGGAGGGGTCAGACCCCTGAACAAGTGAGCTGATCTCTCAAGGAGGAGCTGGATCGGTGTGAGGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546666.1 ENST00000552400.1 |
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| CDS CCA 72 bp | GCATCGGAATCCCAGGGACCTTGGGAATGCTTACCCTaGACCCTCACCTCCCGGACCCTCCACTCATATTCC | + |
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Preference number: 6 (lower is better) Translates to: ASESQGPWECLP*TLTSRTLHSYS Trigger: GGAATATGAGTGGAGGGTCCGGGAGGTGAGGGTCCAGGGTAAGCATTCCCAAGGTCCCTGGGATTCCGATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552400.1 |
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| CDS CCA 72 bp | AAGTTGAGGAGTAAGGGAAGCTGCCACCAAGGACCCTaGCAGGAGGAAATACGCCCCTGGTGGCCTCACACC | + |
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Preference number: 6 (lower is better) Translates to: KLRSKGSCHQGP*QEEIRPWWPHT Trigger: GGTGTGAGGCCACCAGGGGCGTATTTCCTCCTGCCAGGGTCCTTGGTGGCAGCTTCCCTTACTCCTCAACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548088.1 |
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| CDS CAA 72 bp | GATCTCACAAGGGGGTCTGAGACAGTGGCACCAGCTTaGGCCGGGAGATGGGAACCTCCTGCTCCACATCCT | + |
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Preference number: 6 (lower is better) Translates to: DLTRGSETVAPA*AGRWEPPAPHP Trigger: AGGATGTGGAGCAGGAGGTTCCCATCTCCCGGCCAAAGCTGGTGCCACTGTCTCAGACCCCCTTGTGAGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551130.1 |
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| CDS CAA 90 bp | TGTGCTGGAGATCTCACAAGGGGGTCTGAGACAGTGGCACCAGCTTaGGCCGGGAGATGGGAACCTCCTGCTCCACATCCTGAGTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: CAGDLTRGSETVAPA*AGRWEPPAPHPEFG Trigger: GCCAAACTCAGGATGTGGAGCAGGAGGTTCCCATCTCCCGGCCAAAGCTGGTGCCACTGTCTCAGACCCCCTTGTGAGATCTCCAGCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000551130.1 |
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| CDS GCA 72 bp | GAAATCTCATTCCGGGTATTCCGGAGGTCGTCCCCATaGTTCCCAGCCTGGGCCTGGAGGGTCTCAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: EISFRVFRRSSP*FPAWAWRVSNL Trigger: CAAGTTTGAGACCCTCCAGGCCCAGGCTGGGAAGCATGGGGACGACCTCCGGAATACCCGGAATGAGATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000331817.6 ENST00000546856.5 ENST00000551130.1 ENST00000552183.1 ENST00000638501.1 |
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| CDS GCA 72 bp | CCCCGAGGGTCAGCCCAATGCCACCGCCACTGCTACTaGCACCAGTGGAATTCATCACAGAGATATTCACGG | + |
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Preference number: 6 (lower is better) Translates to: PRGSAQCHRHCY*HQWNSSQRYSR Trigger: CCGTGAATATCTCTGTGATGAATTCCACTGGTGGCAGTAGCAGTGGCGGTGGCATTGGGCTGACCCTCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000331817.6 ENST00000549127.5 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS GCA 72 bp | CCTGCAATGAATGATGAGCTCCCAGGGACAGCGCCCTaGAGCCAGAACCAGGTGCAAGCAGAGTGCTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: PAMNDELPGTAP*SQNQVQAECSV Trigger: TACTGAGCACTCTGCTTGCACCTGGTTCTGGCTGCAGGGCGCTGTCCCTGGGAGCTCATCATTCATTGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546856.5 |
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| CDS CAA 72 bp | ACACCGATCCAGCTCCTCCTTGAGAGATCAGCTCACTaGTTCAGGGGTCTGACCCCTCCTGGCCCAGCTAGT | + |
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Preference number: 6 (lower is better) Translates to: TPIQLLLERSAH*FRGLTPPGPAS Trigger: ACTAGCTGGGCCAGGAGGGGTCAGACCCCTGAACAAGTGAGCTGATCTCTCAAGGAGGAGCTGGATCGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000546666.1 ENST00000552400.1 |
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| CDS CAA 90 bp | CCTTGTAAAAGGAGCGAGGAGGCATGCAGGAAGGGAGTGTTCACCTaGGCCCTTCTATCCACTGGCCACCTGACCCCAGGCAATGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: PCKRSEEACRKGVFT*ALLSTGHLTPGNVS Trigger: TGAGACATTGCCTGGGGTCAGGTGGCCAGTGGATAGAAGGGCCAAGGTGAACACTCCCTTCCTGCATGCCTCCTCGCTCCTTTTACAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549638.1 |
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| CDS CAA 90 bp | CAGAGGTCCCCATGGGCTGCTCAGGTGAGAGGATCCTGTGGTCCTTaGTCCCATGTTTTCAGACAACCCTCCTCGAGCCTGTCTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: QRSPWAAQVRGSCGP*SHVFRQPSSSLSFP Trigger: TGGGAAAGACAGGCTCGAGGAGGGTTGTCTGAAAACATGGGACAAAGGACCACAGGATCCTCTCACCTGAGCAGCCCATGGGGACCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547613.1 |
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| CDS GCA 72 bp | TGGTTCCCCCGAGGGTCAGCCCAATGCCACCGCCACTaGTACTGCCACCAGTGGAATTCATCACAGAGATAT | + |
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Preference number: 6 (lower is better) Translates to: WFPRGSAQCHRH*YCHQWNSSQRY Trigger: ATATCTCTGTGATGAATTCCACTGGTGGCAGTAGCAGTGGCGGTGGCATTGGGCTGACCCTCGGGGGAACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000331817.6 ENST00000549127.5 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS GCA 72 bp | GCCTGCCTTCAGCCTTGTAAAAGGAGCGAGGAGGCATaGAGGAAGGGAGTGTTCACCTTGGCCCTTCTATCC | + |
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Preference number: 6 (lower is better) Translates to: ACLQPCKRSEEA*RKGVFTLALLS Trigger: GGATAGAAGGGCCAAGGTGAACACTCCCTTCCTGCATGCCTCCTCGCTCCTTTTACAAGGCTGAAGGCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549638.1 |
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| CDS CCA 72 bp | TTTTCTCCAGGGCTGAGCACCACAGACTTAAACCACTaGTGCCTGCCAGAACAGTGGGACCCAGGCCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FSPGLSTTDLNH*CLPEQWDPGPE Trigger: TTCAGGGCCTGGGTCCCACTGTTCTGGCAGGCACCAGTGGTTTAAGTCTGTGGTGCTCAGCCCTGGAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548088.1 |
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| CDS GCA 72 bp | TCTGTGCACATCCAGGACCTTTCTCCCATCAGCCCATaGCAGGACCTGGCCAAGAACATTCTGTGCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SVHIQDLSPISP*QDLAKNILCWR Trigger: TCTCCAGCACAGAATGTTCTTGGCCAGGTCCTGGCATGGGCTGATGGGAGAAAGGTCCTGGATGTGCACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551130.1 |
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| CDS GCA 72 bp | ACAGCGCCCTGCAGCCAGAACCAGGTGCAAGCAGAGTaGTCAGTATCAATGTGGAACCAGTGGTGGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: TAPCSQNQVQAE*SVSMWNQWWLS Trigger: AGAAAGCCACCACTGGTTCCACATTGATACTGAGCACTCTGCTTGCACCTGGTTCTGGCTGCAGGGCGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546856.5 |
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| CDS CCA 72 bp | TCAGCCCAATGCCACCGCCACTGCTACTGCCACCAGTaGAATTCATCACAGAGATATTCACGGCTCCCACTC | + |
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Preference number: 6 (lower is better) Translates to: SAQCHRHCYCHQ*NSSQRYSRLPL Trigger: GAGTGGGAGCCGTGAATATCTCTGTGATGAATTCCACTGGTGGCAGTAGCAGTGGCGGTGGCATTGGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331817.6 ENST00000549127.5 ENST00000549638.1 ENST00000550153.1 ENST00000552322.5 |
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| CDS CCA 72 bp | CAGAACCAGGTGCAAGCAGAGTGCTCAGTATCAATGTaGAACCAGTGGTGGCTTTCTTCTGGCCAGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: QNQVQAECSVSM*NQWWLSSGQPA Trigger: GGCTGGCTGGCCAGAAGAAAGCCACCACTGGTTCCACATTGATACTGAGCACTCTGCTTGCACCTGGTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546856.5 |
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| CDS CAA 72 bp | GGGCCATGTAGTCTCTGCCTCAACTGCTCCACTCCGTaGTCATGTAAAGCAGCCACAGCCAAAGGCAATACT | + |
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Preference number: 6 (lower is better) Translates to: GPCSLCLNCSTP*SCKAATAKGNT Trigger: AGTATTGCCTTTGGCTGTGGCTGCTTTACATGACAACGGAGTGGAGCAGTTGAGGCAGAGACTACATGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548657.5 |
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| CDS TCA 72 bp | AGGAAGCGGTATGACTGGGTTCCAAGAAAACTTGATTaGCAAACAGGAAGCCTGCATGTGGCCGTAGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: RKRYDWVPRKLD*QTGSLHVAVVC Trigger: GCAAACTACGGCCACATGCAGGCTTCCTGTTTGTCAATCAAGTTTTCTTGGAACCCAGTCATACCGCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548657.5 |
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| CDS TCA 72 bp | TTGTCATGTAAAGCAGCCACAGCCAAAGGCAATACTTaGAGGAAGCGGTATGACTGGGTTCCAAGAAAACTT | + |
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Preference number: 6 (lower is better) Translates to: LSCKAATAKGNT*RKRYDWVPRKL Trigger: AAGTTTTCTTGGAACCCAGTCATACCGCTTCCTTCAAGTATTGCCTTTGGCTGTGGCTGCTTTACATGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548657.5 |
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| CDS TCA 72 bp | GGTGTCTGTGGCCTATTGATACTTTTATCCCCAGTATaGGGCCTGGAGAAGTCATTGCTTAATATATGTCAA | + |
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Preference number: 6 (lower is better) Translates to: GVCGLLILLSPV*GLEKSLLNICQ Trigger: TTGACATATATTAAGCAATGACTTCTCCAGGCCTCATACTGGGGATAAAAGTATCAATAGGCCACAGACACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550153.1 |
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| CDS CAA 72 bp | GGAGAGAATTTGCAGGTTAAACAGATTTCACCAGCTTaGCTCCCCACAACTAATTTCTGTCTCTTTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GENLQVKQISPA*LPTTNFCLFAF Trigger: GAAAGCAAAGAGACAGAAATTAGTTGTGGGGAGCAAAGCTGGTGAAATCTGTTTAACCTGCAAATTCTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548657.5 |
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| CDS CAA 90 bp | CTAATTGGAGGAGAGAATTTGCAGGTTAAACAGATTTCACCAGCTTaGCTCCCCACAACTAATTTCTGTCTCTTTGCTTTCCCTATAAGG | + |
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Preference number: 6 (lower is better) Translates to: LIGGENLQVKQISPA*LPTTNFCLFAFPIR Trigger: CCTTATAGGGAAAGCAAAGAGACAGAAATTAGTTGTGGGGAGCAAAGCTGGTGAAATCTGTTTAACCTGCAAATTCTCTCCTCCAATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548657.5 |
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| CDS CAA 90 bp | ATTATTTACTTGGAATGTGCATCAACGCTAATTGGAGGAGAGAATTaGCAGGTTAAACAGATTTCACCAGCTTTGCTCCCCACAACTAAT | + |
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Preference number: 6 (lower is better) Translates to: IIYLECASTLIGGEN*QVKQISPALLPTTN Trigger: ATTAGTTGTGGGGAGCAAAGCTGGTGAAATCTGTTTAACCTGCAAATTCTCTCCTCCAATTAGCGTTGATGCACATTCCAAGTAAATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000548657.5 |
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