RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KRT40 (Homo sapiens)

Ensembl gene IDs: ENSG00000204889

Ensembl transcript IDs: ENST00000377755.8, ENST00000377755.9, ENST00000398486.2, ENST00000461923.5, ENST00000576064.5, ENST00000576967.6, ENST00000610983.1, ENST00000684280.1

Found 346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATTCTTCAGCTTCTCTGCGATTGTTGGCAAGCACCGTTTCACACTaGCAGCGCATCTCATCCAGGACCCTGTTGAGGTCAAGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: HSSASLRLLASTVSH*QRISSRTLLRSRVG
Trigger: CCCCACCCTTGACCTCAACAGGGTCCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR GCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTaGTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTCT +
Preference number: 1 (lower is better)
Translates to: DTWRAIPGYESLLDL*FRFGCPWLKPHLLS
Trigger: AGAAAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR CCA 90 bp CTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTaGCAAGCACCGTTTCACACTGACAGCGCATCTCATCCAGGACCC +
Preference number: 1 (lower is better)
Translates to: LLSEQPTILQLLCDC*QAPFHTDSASHPGP
Trigger: GGGTCCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR CCA 90 bp GGATATGAGAGCCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTaGTTGAAGCCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATT +
Preference number: 1 (lower is better)
Translates to: GYESLLDLCFRFGCP*LKPHLLSRMLLALI
Trigger: AATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGGCTCTCATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR TCA 90 bp ACACTGAGGCGGTCGCCAAGCTGTTCACGAAGCAAGTTGACTTCCTaGAAGTGGGATGGTGTAAAGAATGTCACAGAATGGTGGGGAAAA +
Preference number: 1 (lower is better)
Translates to: TLRRSPSCSRSKLTS*KWDGVKNVTEWWGK
Trigger: TTTTCCCCACCATTCTGTGACATTCTTTACACCATCCCACTTTCAGGAAGTCAACTTGCTTCGTGAACAGCTTGGCGACCGCCTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR TCA 90 bp CTGCTGTCCTTAACATTCACAAGCAGCAGTTTTCAACAGTGCAGATaGCATAGGCTGAGCATGGCTCACAAGTGTTGCTCGAGGTGCATG +
Preference number: 1 (lower is better)
Translates to: LLSLTFTSSSFQQCR*HRLSMAHKCCSRCM
Trigger: CATGCACCTCGAGCAACACTTGTGAGCCATGCTCAGCCTATGTCATCTGCACTGTTGAAAACTGCTGCTTGTGAATGTTAAGGACAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR GCA 90 bp GATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTaGGATTGTTGGCAAGCACCGTTTCACACTGACAGCGCATCTCAT +
Preference number: 1 (lower is better)
Translates to: DSALLSEQPTILQLL*DCWQAPFHTDSASH
Trigger: ATGAGATGCGCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR CCA 90 bp GTCGCCAAGCTGTTCACGAAGCAAGTTGACTTCCTGAAAGTGGGATaGTGTAAAGAATGTCACAGAATGGTGGGGAAAAATCCATTTGAC +
Preference number: 1 (lower is better)
Translates to: VAKLFTKQVDFLKVG*CKECHRMVGKNPFD
Trigger: GTCAAATGGATTTTTCCCCACCATTCTGTGACATTCTTTACACCATCCCACTTTCAGGAAGTCAACTTGCTTCGTGAACAGCTTGGCGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR GCA 90 bp TCGGTTTCTGCCACGGTGCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGTGGCAGCCCTGCAGCTaGTCCGCGCTGGACAGTTGC +
Preference number: 2 (lower is better)
Translates to: SVSATVHSRDSVRLCCAWWQPCS*SALDSC
Trigger: GCAACTGTCCAGCGCGGAGCAGCTGCAGGGCTGCCA...CCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGCACCGTGGCAGAAACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR TCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTGGATGCTGCTGGCTTTaGTTCCTCTACCTGCTGTCC +
Preference number: 2 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPGCCWL*FLYLLS
Trigger: GGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCC...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR TCA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCCATCCAGGACCCTGTTaGGGTCAAGGGTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: AFQRFCQALLCLELNFQSHPGPC*GQGWGQ
Trigger: CTGCCCCCACCCTTGACCTCAACAGGGTCCTGGATG...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR TCA 90 bp CAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCCATCCAGGACCCTGTTaGGGTCAAGGGTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: QLFCLNSQPFFSFSAIVGHPGPC*GQGWGQ
Trigger: CTGCCCCCACCCTTGACCTCAACAGGGTCCTGGATG...GCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR GCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTGGCTACAGGAAAGCCTaGTGTCCTCGCTGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLGYRKA*CPRCPA
Trigger: TGCTGGACAGCGAGGACAGCAGGCTTTCCTGTAGCC...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR CAA 90 bp GAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTaGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: EDTWRAIPGYESLLD*CFRFGCPWLKPHLL
Trigger: AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR TCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGATGCTGCTGGCTTTaGTTCCTCTACCTGCTGTCC +
Preference number: 2 (lower is better)
Translates to: RIPGGQFQDMRASWICASGCCWL*FLYLLS
Trigger: GGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCC...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR TCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGGATGCTGCTGGCTTTaGTTCCTCTACCTGCTGTCC +
Preference number: 2 (lower is better)
Translates to: RLRIPGGQFQDMRASWICGCCWL*FLYLLS
Trigger: GGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCC...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR GCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCAGCCTCCTGGATTTGTaGTTCCGGTTTGGATGTCCC +
Preference number: 2 (lower is better)
Translates to: RIPGGQFQDMRASWICASSLLDL*FRFGCP
Trigger: GGGACATCCAAACCGGAAGCACAAATCCAGGAGGCT...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR CCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCCGGTTTGGATGTCCCTaGTTGAAGCCCCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: RIPGGQFQDMRASWICASRFGCP*LKPHLL
Trigger: AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCG...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR CCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTCGGTTTGGATGTCCCTaGTTGAAGCCCCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLRFGCP*LKPHLL
Trigger: AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCG...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR CAA 90 bp TATGAGAGCCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTaGAAGCCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCT +
Preference number: 2 (lower is better)
Translates to: YESLLDLCFRFGCPW*KPHLLSRMLLALIP
Trigger: AGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGGCTCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR TCA 90 bp GCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATGGATGCTGCTGGCTTTaGTTCCTCTACCTGCTGTCC +
Preference number: 2 (lower is better)
Translates to: ADSALLSEQPTILQLLCDGCCWL*FLYLLS
Trigger: GGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCC...ATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR TCA 90 bp TGGACAGTTGCTGCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGAGCACCGTTTCACACTaGCAGCGCATCTCATCCAGG +
Preference number: 2 (lower is better)
Translates to: WTVAADSALLSEQPTILQSTVSH*QRISSR
Trigger: CCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCT...CTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGCAGCAACTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR GCA 90 bp CAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCAAGCACCGTTTCACACTAGCCTCCTGGATTTGTaGTTCCGGTTTGGATGTCCC +
Preference number: 2 (lower is better)
Translates to: QPTILQLLCDCWQAPFHTSLLDL*FRFGCP
Trigger: GGGACATCCAAACCGGAAGCACAAATCCAGGAGGCT...AGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR GCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTCCAGAGCACTGGCTGTaGGTTTCAGTTCCAAGATCT +
Preference number: 2 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLPEHWL*VSVPRS
Trigger: AGATCTTGGAACTGAAACGCACAGCCAGTGCTCTGG...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR GCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCCGGTTTCTGCCACGGTaGATTCCAGAGATTCTGTCA +
Preference number: 2 (lower is better)
Translates to: RIPGGQFQDMRASWICASRFLPR*IPEILS
Trigger: TGACAGAATCTCTGGAATGCACCGTGGCAGAAACCG...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CCA 90 bp CAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCAAGCACCGTTTCACACTCGGTTTGGATGTCCCTaGTTGAAGCCCCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: QPTILQLLCDCWQAPFHTRFGCP*LKPHLL
Trigger: AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCG...AGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTTTTGTGCTTCCGGTTTaGATGTCCCTGGTTGAAGCC +
Preference number: 2 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLFVLPV*MSLVEA
Trigger: GGCTTCAACCAGGGACATCCAAACCGGAAGCACAAA...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR CCA 90 bp TCGGTTTCTGCCACGGTGCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGCAATTTCCAGAGCACTaGCTGTGCGTTTCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: SVSATVHSRDSVRLCCAWQFPEH*LCVSVP
Trigger: TGGAACTGAAACGCACAGCCAGTGCTCTGGAAATTG...CCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGCACCGTGGCAGAAACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR TCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTGTAAAGCAGAAAGACTaGGGATACCTGGAGGGCAAT +
Preference number: 2 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLVKQKD*GYLEGN
Trigger: ATTGCCCTCCAGGTATCCTCAGTCTTTCTGCTTTAC...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR GCA 90 bp GCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATAGCCTCCTGGATTTGTaGTTCCGGTTTGGATGTCCC +
Preference number: 2 (lower is better)
Translates to: ADSALLSEQPTILQLLCDSLLDL*FRFGCP
Trigger: GGGACATCCAAACCGGAAGCACAAATCCAGGAGGCT...ATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGATATGAGAGCCTCCTaGATTTGTGCTTCCGGTTTG +
Preference number: 2 (lower is better)
Translates to: RIPGGQFQDMRASWICASDMRAS*ICASGL
Trigger: CAAACCGGAAGCACAAATCCAGGAGGCTCTCATATC...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR CCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTGATTCAGATTGCCTaGGCTGAATCTCTTTTCACC +
Preference number: 2 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPLIQIA*AESLFT
Trigger: GGTGAAAAGAGATTCAGCCCAGGCAATCTGAATCAA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTAGGCTTTGCTGTGCTTaGAGCTCAATTTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLRLCCA*SSISRA
Trigger: TGCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCT...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR CAA 90 bp TGTCCCTGGTTGAAGCCCCATCTCCTTTCTAGGATGCTGCTGGCTTaGATTCCTCTACCTGCTGTCCTTAACATTCACAAGCAGCAGTTT +
Preference number: 2 (lower is better)
Translates to: CPWLKPHLLSRMLLA*IPLPAVLNIHKQQF
Trigger: AAACTGCTGCTTGTGAATGTTAAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGGCTTCAACCAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR TCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGAAAAGTGTGAGATTTTaGTTCAGATTGCCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRKSVRF*FRLPGL
Trigger: CAGCCCAGGCAATCTGAATCAAAATCTCACACTTTT...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CCA 90 bp CAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCAAGCACCGTTTCACACTGATATGAGAGCCTCCTaGATTTGTGCTTCCGGTTTG +
Preference number: 2 (lower is better)
Translates to: QPTILQLLCDCWQAPFHTDMRAS*ICASGL
Trigger: CAAACCGGAAGCACAAATCCAGGAGGCTCTCATATC...AGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTAAGACTGAGGATACCTaGAGGGCAATTCCAGGATAT +
Preference number: 2 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLKTEDT*RAIPGY
Trigger: ATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCTT...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR TCA 90 bp CAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCAGCAAGTTGACTTCCTaGAAGTGGGATGGTGTAAAG +
Preference number: 2 (lower is better)
Translates to: QLFCLNSQPFFSFSAIVGSKLTS*KWDGVK
Trigger: CTTTACACCATCCCACTTTCAGGAAGTCAACTTGCT...GCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR GCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGAGATGAGCAAGAATaGTTTATGGGCTTCCAGTAT +
Preference number: 2 (lower is better)
Translates to: RIPGGQFQDMRASWICASGDEQE*FMGFQY
Trigger: ATACTGGAAGCCCATAAAGCATTCTTGCTCATCTCC...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR CCA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCAAGACTGAGGATACCTaGAGGGCAATTCCAGGATAT +
Preference number: 2 (lower is better)
Translates to: AFQRFCQALLCLELNFQSKTEDT*RAIPGY
Trigger: ATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCTT...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR TCA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCAAAAGTGTGAGATTTTaGTTCAGATTGCCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: AFQRFCQALLCLELNFQSKSVRF*FRLPGL
Trigger: CAGCCCAGGCAATCTGAATCAAAATCTCACACTTTT...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR GCA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCGGAGATGAGCAAGAATaGTTTATGGGCTTCCAGTAT +
Preference number: 2 (lower is better)
Translates to: AFQRFCQALLCLELNFQSGDEQE*FMGFQY
Trigger: ATACTGGAAGCCCATAAAGCATTCTTGCTCATCTCC...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CCA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCTTGATTCAGATTGCCTaGGCTGAATCTCTTTTCACC +
Preference number: 2 (lower is better)
Translates to: AFQRFCQALLCLELNFQSLIQIA*AESLFT
Trigger: GGTGAAAAGAGATTCAGCCCAGGCAATCTGAATCAA...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR TCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTCAGTGGGTAAAAGTGTaGGATTTTGATTCAGATTGC +
Preference number: 2 (lower is better)
Translates to: RLRIPGGQFQDMRASWICQWVKV*DFDSDC
Trigger: GCAATCTGAATCAAAATCTCACACTTTTACCCACTG...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACCGGTTTGGATGTCCCTaGTTGAAGCCCCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDRFGCP*LKPHLL
Trigger: AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCG...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR TCA 90 bp GCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATCAGTGGGTAAAAGTGTaGGATTTTGATTCAGATTGC +
Preference number: 2 (lower is better)
Translates to: ADSALLSEQPTILQLLCDQWVKV*DFDSDC
Trigger: GCAATCTGAATCAAAATCTCACACTTTTACCCACTG...ATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACGATATGAGAGCCTCCTaGATTTGTGCTTCCGGTTTG +
Preference number: 2 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDDMRAS*ICASGL
Trigger: CAAACCGGAAGCACAAATCCAGGAGGCTCTCATATC...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR CAA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCTCATCCAGGACCCTGTaGAGGTCAAGGGTGGGGGCA +
Preference number: 3 (lower is better)
Translates to: RIPGGQFQDMRASWICASSSRTL*RSRVGA
Trigger: TGCCCCCACCCTTGACCTCAACAGGGTCCTGGATGA...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CAA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTAGGATGCTGCTGGCTTaGATTCCTCTACCTGCTGTC +
Preference number: 3 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPRMLLA*IPLPAV
Trigger: GACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCT...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR TCA 72 bp GCTTCTCTGCGATTGTTGGCAAGCACCGTTTCACACTaGCAGCGCATCTCATCCAGGACCCTGTTGAGGTCA +
Preference number: 3 (lower is better)
Translates to: ASLRLLASTVSH*QRISSRTLLRS
Trigger: TGACCTCAACAGGGTCCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CAA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTAGGATGCTGCTGGCTTaGATTCCTCTACCTGCTGTC +
Preference number: 3 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLRMLLA*IPLPAV
Trigger: GACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCT...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR CAA 90 bp TCTGCGATTGTTGGCAAGCACCGTTTCACACTGACAGCGCATCTCATCCAGGACAGGATGCTGCTGGCTTaGATTCCTCTACCTGCTGTC +
Preference number: 3 (lower is better)
Translates to: SAIVGKHRFTLTAHLIQDRMLLA*IPLPAV
Trigger: GACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCT...GTCCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CAA 90 bp TCTGCGATTGTTGGCAAGCACCGTTTCACACTGACAGCGCATCTCATCCAGGACGAGAGCCTCCTGGATTaGTGCTTCCGGTTTGGATGT +
Preference number: 3 (lower is better)
Translates to: SAIVGKHRFTLTAHLIQDESLLD*CFRFGC
Trigger: ACATCCAAACCGGAAGCACAAATCCAGGAGGCTCTC...GTCCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CAA 90 bp TCGGTTTCTGCCACGGTGCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGGCTTCTCTGCGATTGTaGGCAAGCACCGTTTCACAC +
Preference number: 3 (lower is better)
Translates to: SVSATVHSRDSVRLCCAWASLRL*ASTVSH
Trigger: GTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGC...CCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGCACCGTGGCAGAAACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR GCA 72 bp AGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTaGTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCAT +
Preference number: 3 (lower is better)
Translates to: RAIPGYESLLDL*FRFGCPWLKPH
Trigger: ATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR CCA 72 bp GGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCACTaGCTGTGCGTTTCAGTTCCAAGATCTCCATCTGGC +
Preference number: 3 (lower is better)
Translates to: GFAVLGAQFPEH*LCVSVPRSPSG
Trigger: GCCAGATGGAGATCTTGGAACTGAAACGCACAGCCAGTGCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CAA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTaGAAGCCCCATCTCCTTTCT +
Preference number: 3 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRFGCPW*KPHLLS
Trigger: AGAAAGGAGATGGGGCTTCAACCAGGGACATCCAAA...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR CAA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGAGAGCCTCCTGGATTaGTGCTTCCGGTTTGGATGT +
Preference number: 3 (lower is better)
Translates to: RIPGGQFQDMRASWICASESLLD*CFRFGC
Trigger: ACATCCAAACCGGAAGCACAAATCCAGGAGGCTCTC...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR CAA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTAGGATGCTGCTGGCTTaGATTCCTCTACCTGCTGTC +
Preference number: 3 (lower is better)
Translates to: RLRIPGGQFQDMRASWICRMLLA*IPLPAV
Trigger: GACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCT...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR-3UTR CAA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTTCAGCTTCTCTGCGATaGTTGGCAAGCACCGTTTCA +
Preference number: 3 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLSASLR*LASTVS
Trigger: TGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGA...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR GCA 72 bp CTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTaGGATTGTTGGCAAGCACCGTTTCACACTGACAGC +
Preference number: 3 (lower is better)
Translates to: LLSEQPTILQLL*DCWQAPFHTDS
Trigger: GCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR CCA 72 bp GAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTaGCAAGCACCGTTTCACACTGACAGCGCATCTCAT +
Preference number: 3 (lower is better)
Translates to: EQPTILQLLCDC*QAPFHTDSASH
Trigger: ATGAGATGCGCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CAA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTTTCTACTTCTGTTTTTaGGAGCAGTGGGTAAAAGTG +
Preference number: 3 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLFYFCF*EQWVKV
Trigger: CACTTTTACCCACTGCTCCAAAAAACAGAAGTAGAA...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR-3UTR CAA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCCTGGGTTTATGTACATaGAAACTATGGTTATGGGTT +
Preference number: 3 (lower is better)
Translates to: RIPGGQFQDMRASWICASLGLCT*KLWLWV
Trigger: AACCCATAACCATAGTTTCAATGTACATAAACCCAG...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377755.8
ENST00000461923.5
ENST00000576064.5
ENST00000610983.1
3UTR-3UTR CAA 90 bp CAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCTTCTACTTCTGTTTTTaGGAGCAGTGGGTAAAAGTG +
Preference number: 3 (lower is better)
Translates to: QLFCLNSQPFFSFSAIVGFYFCF*EQWVKV
Trigger: CACTTTTACCCACTGCTCCAAAAAACAGAAGTAGAA...GCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
3UTR TCA 72 bp TTAACATTCACAAGCAGCAGTTTTCAACAGTGCAGATaGCATAGGCTGAGCATGGCTCACAAGTGTTGCTCG +
Preference number: 3 (lower is better)
Translates to: LTFTSSSFQQCR*HRLSMAHKCCS
Trigger: CGAGCAACACTTGTGAGCCATGCTCAGCCTATGTCATCTGCACTGTTGAAAACTGCTGCTTGTGAATGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp TCTGCGATTGTTGGCAAGCACCGTTTCACACTGACAGCGCATCTCATCCAGGACTGGCAGCCCTGCAGCTaGTCCGCGCTGGACAGTTGC +
Preference number: 4 (lower is better)
Translates to: SAIVGKHRFTLTAHLIQDWQPCS*SALDSC
Trigger: GCAACTGTCCAGCGCGGAGCAGCTGCAGGGCTGCCA...GTCCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR TCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTCCACGGAGCAGCTTaGGGCAGGTGCACAACCGGA +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPFHGAA*GRCTTG
Trigger: TCCGGTTGTGCACCTGCCTCAAGCTGCTCCGTGGAA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTCACAACCGGAAGCCGTaGCACAGGACTCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPHNRKP*HRTQES
Trigger: GCTCTCCTGAGTCCTGTGGCACGGCTTCCGGTTGTG...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTTGGCAGCCCTGCAGCTaGTCCGCGCTGGACAGTTGC +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLWQPCS*SALDSC
Trigger: GCAACTGTCCAGCGCGGAGCAGCTGCAGGGCTGCCA...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTTCCACGGAGCAGCTTaGGGCAGGTGCACAACCGGA +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLFHGAA*GRCTTG
Trigger: TCCGGTTGTGCACCTGCCTCAAGCTGCTCCGTGGAA...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGTTCCACGGAGCAGCTTaGGGCAGGTGCACAACCGGA +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRFHGAA*GRCTTG
Trigger: TCCGGTTGTGCACCTGCCTCAAGCTGCTCCGTGGAA...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGTGTCCAGCTCCACACTaGGGCGGTCGCCAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRCPAPH*GGRQAV
Trigger: AACAGCTTGGCGACCGCCTCAGTGTGGAGCTGGACA...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCCATCCAGGACCCTGTTaGGGTCAAGGGTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASHPGPC*GQGWGQ
Trigger: CTGCCCCCACCCTTGACCTCAACAGGGTCCTGGATG...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGCACAACCGGAAGCCGTaGCACAGGACTCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRHNRKP*HRTQES
Trigger: GCTCTCCTGAGTCCTGTGGCACGGCTTCCGGTTGTG...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCACAACCGGAAGCCGTaGCACAGGACTCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLHNRKP*HRTQES
Trigger: GCTCTCCTGAGTCCTGTGGCACGGCTTCCGGTTGTG...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCCTCCAGGATCCCATaGAGGCTGCTGATGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPSSRIP*RLLMSA
Trigger: GGCTGACATCAGCAGCCTGCATGGGATCCTGGAGGA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTTGGCAGCCCTGCAGCTaGTCCGCGCTGGACAGTTGC +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICWQPCS*SALDSC
Trigger: GCAACTGTCCAGCGCGGAGCAGCTGCAGGGCTGCCA...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCAAGCACCGTTTCACACTTGGCAGCCCTGCAGCTaGTCCGCGCTGGACAGTTGC +
Preference number: 4 (lower is better)
Translates to: QPTILQLLCDCWQAPFHTWQPCS*SALDSC
Trigger: GCAACTGTCCAGCGCGGAGCAGCTGCAGGGCTGCCA...AGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTCTGGGCCTCGGTTTCTaGCACGGTGCATTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPLGLGF*HGAFQR
Trigger: TCTCTGGAATGCACCGTGGCAGAAACCGAGGCCCAG...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTGCAGCTGCTCCGCGCTaGACAGTTGCTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPAAAPR*TVAADS
Trigger: TGAATCAGCAGCAACTGTCCAGCGCGGAGCAGCTGC...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCCCATGCAGGCTGCTaGTGTCAGCCTCTAACAGCT +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPSHAGC*CQPLTA
Trigger: AGCTGTTAGAGGCTGACATCAGCAGCCTGCATGGGA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTTGTCCAGCTCCACACTaGGGCGGTCGCCAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLCPAPH*GGRQAV
Trigger: AACAGCTTGGCGACCGCCTCAGTGTGGAGCTGGACA...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTCATCCAGGACCCTGTTaGGGTCAAGGGTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICHPGPC*GQGWGQ
Trigger: CTGCCCCCACCCTTGACCTCAACAGGGTCCTGGATG...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTAGCACCGTTTCACACTaGCAGCGCATCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPSTVSH*QRISSR
Trigger: CCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCT...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCCACAACCGGAAGCCGTaGCACAGGACTCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASHNRKP*HRTQES
Trigger: GCTCTCCTGAGTCCTGTGGCACGGCTTCCGGTTGTG...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTCCTCCAGGATCCCATaGAGGCTGCTGATGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLSSRIP*RLLMSA
Trigger: GGCTGACATCAGCAGCCTGCATGGGATCCTGGAGGA...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCAGCCCGCGAGACCTaGATAGGAAGCTTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPSARET*IGSLES
Trigger: AGACTCCAAGCTTCCTATCCAGGTCTCGCGGGCTGA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTATTCCAGCTCTGCGTTaGTCTCCTCCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLIPALR*SPPGCA
Trigger: TGCGCAGCCTGGAGGAGACCAACGCAGAGCTGGAAT...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTCCCATGCAGGCTGCTaGTGTCAGCCTCTAACAGCT +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLSHAGC*CQPLTA
Trigger: AGCTGTTAGAGGCTGACATCAGCAGCCTGCATGGGA...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTAGCACCGTTTCACACTaGCAGCGCATCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLSTVSH*QRISSR
Trigger: CCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCT...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp TCTGCGATTGTTGGCAAGCACCGTTTCACACTGACAGCGCATCTCATCCAGGACGGATGCTGCTGGCTTTaGTTCCTCTACCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SAIVGKHRFTLTAHLIQDGCCWL*FLYLLS
Trigger: GGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCC...GTCCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR TCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTGGATGCTGCTGGCTTTaGTTCCTCTACCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLGCCWL*FLYLLS
Trigger: GGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCC...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTCTGGGCCTCGGTTTCTaGCACGGTGCATTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLLGLGF*HGAFQR
Trigger: TCTCTGGAATGCACCGTGGCAGAAACCGAGGCCCAG...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTAAGTGTTGCTCGAGGTaGATGTGGTCGAACATGGGC +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPKCCSR*MWSNMG
Trigger: GCCCATGTTCGACCACATGCACCTCGAGCAACACTT...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTCAGGAGAGCAGTGTGTaGAGGAGCAGTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPQESSV*RSSQKS
Trigger: TGACTTCTGACTGCTCCTCCACACACTGCTCTCCTG...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGTCAGCCCGCGAGACCTaGATAGGAAGCTTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRSARET*IGSLES
Trigger: AGACTCCAAGCTTCCTATCCAGGTCTCGCGGGCTGA...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTATTCCAGCTCTGCGTTaGTCTCCTCCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLIPALR*SPPGCA
Trigger: TGCGCAGCCTGGAGGAGACCAACGCAGAGCTGGAAT...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCAGCCTCTAACAGCTaGCGAAGGGACAGTTCACTC +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPSASNS*RRDSSL
Trigger: GAGTGAACTGTCCCTTCGCCAGCTGTTAGAGGCTGA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGTGCTCGAGGTGCATGTaGTCGAACATGGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRCSRCM*SNMGYR
Trigger: CCTGTAGCCCATGTTCGACCACATGCACCTCGAGCA...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTGCTCGAGGTGCATGTaGTCGAACATGGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLCSRCM*SNMGYR
Trigger: CCTGTAGCCCATGTTCGACCACATGCACCTCGAGCA...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
3UTR CAA 72 bp TGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTaGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: WRAIPGYESLLD*CFRFGCPWLKP
Trigger: GGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377755.8
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp TGGACAGTTGCTGCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGTTCCACGGAGCAGCTTaGGGCAGGTGCACAACCGGA +
Preference number: 4 (lower is better)
Translates to: WTVAADSALLSEQPTILQFHGAA*GRCTTG
Trigger: TCCGGTTGTGCACCTGCCTCAAGCTGCTCCGTGGAA...CTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGCAGCAACTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR TCA 90 bp TGGACAGTTGCTGCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGTGTCCAGCTCCACACTaGGGCGGTCGCCAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: WTVAADSALLSEQPTILQCPAPH*GGRQAV
Trigger: AACAGCTTGGCGACCGCCTCAGTGTGGAGCTGGACA...CTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGCAGCAACTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR TCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTAGCACCGTTTCACACTaGCAGCGCATCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLSTVSH*QRISSR
Trigger: CCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCT...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCAGCACCGTTTCACACTaGCAGCGCATCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASSTVSH*QRISSR
Trigger: CCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCT...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTGGATGCTGCTGGCTTTaGTTCCTCTACCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLGCCWL*FLYLLS
Trigger: GGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCC...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp TGGACAGTTGCTGCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCACAACCGGAAGCCGTaGCACAGGACTCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: WTVAADSALLSEQPTILQHNRKP*HRTQES
Trigger: GCTCTCCTGAGTCCTGTGGCACGGCTTCCGGTTGTG...CTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGCAGCAACTGTCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTTCCTCCAGGATCCCATaGAGGCTGCTGATGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICSSRIP*RLLMSA
Trigger: GGCTGACATCAGCAGCCTGCATGGGATCCTGGAGGA...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTCTGGGCCTCGGTTTCTaGCACGGTGCATTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICLGLGF*HGAFQR
Trigger: TCTCTGGAATGCACCGTGGCAGAAACCGAGGCCCAG...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCGGCTACAGGAAAGCCTaGTGTCCTCGCTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AFQRFCQALLCLELNFQSGYRKA*CPRCPA
Trigger: TGCTGGACAGCGAGGACAGCAGGCTTTCCTGTAGCC...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTAAGTGTTGCTCGAGGTaGATGTGGTCGAACATGGGC +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLKCCSR*MWSNMG
Trigger: GCCCATGTTCGACCACATGCACCTCGAGCAACACTT...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGAGCCTCCTGGATTTGTaGTTCCGGTTTGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRSLLDL*FRFGCP
Trigger: GGGACATCCAAACCGGAAGCACAAATCCAGGAGGCT...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTAGCCTCCTGGATTTGTaGTTCCGGTTTGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLSLLDL*FRFGCP
Trigger: GGGACATCCAAACCGGAAGCACAAATCCAGGAGGCT...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTCCTGCACAATATTCCTaGACCCAGCTATCACCAGAC +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPPAQYS*TQLSPD
Trigger: GTCTGGTGATAGCTGGGTGCAGGAATATTGTGCAGG...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
CDS-3UTR CCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGCCCAGTAAAGTAGCATaGCAGGAGGCAACCAGTCAG +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRPSKVA*QEATSQ
Trigger: CTGACTGGTTGCCTCCTGCCATGCTACTTTACTGGG...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCATTCCAGCTCTGCGTTaGTCTCCTCCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: QLFCLNSQPFFSFSAIVGIPALR*SPPGCA
Trigger: TGCGCAGCCTGGAGGAGACCAACGCAGAGCTGGAAT...GCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCATTCCAGCTCTGCGTTaGTCTCCTCCAGGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: AFQRFCQALLCLELNFQSIPALR*SPPGCA
Trigger: TGCGCAGCCTGGAGGAGACCAACGCAGAGCTGGAAT...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGTCAGCCTCTAACAGCTaGCGAAGGGACAGTTCACTC +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRSASNS*RRDSSL
Trigger: GAGTGAACTGTCCCTTCGCCAGCTGTTAGAGGCTGA...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCGCAGCTGCTCCGCGCTaGACAGTTGCTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: QLFCLNSQPFFSFSAIVGAAAPR*TVAADS
Trigger: TGAATCAGCAGCAACTGTCCAGCGCGGAGCAGCTGC...GCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCGCAGCTGCTCCGCGCTaGACAGTTGCTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: AFQRFCQALLCLELNFQSAAAPR*TVAADS
Trigger: TGAATCAGCAGCAACTGTCCAGCGCGGAGCAGCTGC...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTTGCTCGAGGTGCATGTaGTCGAACATGGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLCSRCM*SNMGYR
Trigger: CCTGTAGCCCATGTTCGACCACATGCACCTCGAGCA...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp TCGGTTTCTGCCACGGTGCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGCGGTTTGGATGTCCCTaGTTGAAGCCCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: SVSATVHSRDSVRLCCAWRFGCP*LKPHLL
Trigger: AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCG...CCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGCACCGTGGCAGAAACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGCGGTTTGGATGTCCCTaGTTGAAGCCCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRRFGCP*LKPHLL
Trigger: AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCG...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCGGTTTGGATGTCCCTaGTTGAAGCCCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLRFGCP*LKPHLL
Trigger: AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCG...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTTGTGCTTCCGGTTTaGATGTCCCTGGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPFVLPV*MSLVEA
Trigger: GGCTTCAACCAGGGACATCCAAACCGGAAGCACAAA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCTCCCATGCAGGCTGCTaGTGTCAGCCTCTAACAGCT +
Preference number: 4 (lower is better)
Translates to: QLFCLNSQPFFSFSAIVGSHAGC*CQPLTA
Trigger: AGCTGTTAGAGGCTGACATCAGCAGCCTGCATGGGA...GCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR TCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTGTAAAGCAGAAAGACTaGGGATACCTGGAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPVKQKD*GYLEGN
Trigger: ATTGCCCTCCAGGTATCCTCAGTCTTTCTGCTTTAC...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTATTCTTCAGCTTCTCTaGGATTGTTGGCAAGCACCG +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPILQLL*DCWQAP
Trigger: CGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAAT...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGCCAGAGCACTGGCTGTaGGTTTCAGTTCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRPEHWL*VSVPRS
Trigger: AGATCTTGGAACTGAAACGCACAGCCAGTGCTCTGG...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTGTCAGGCTTTGCTGTaGTTGGAGCTCAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPCQALL*LELNFQ
Trigger: CTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGCGGTTTCTGCCACGGTaGATTCCAGAGATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRRFLPR*IPEILS
Trigger: TGACAGAATCTCTGGAATGCACCGTGGCAGAAACCG...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp TGGACAGTTGCTGCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGGGCTACAGGAAAGCCTaGTGTCCTCGCTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WTVAADSALLSEQPTILQGYRKA*CPRCPA
Trigger: TGCTGGACAGCGAGGACAGCAGGCTTTCCTGTAGCC...CTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGCAGCAACTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTATGGCTCACAAGTGTTaGTCGAGGTGCATGTGGTCG +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLMAHKC*SRCMWS
Trigger: CGACCACATGCACCTCGAGCAACACTTGTGAGCCAT...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCCCTCCCAGAGCACTTTaGACGCATCTCTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASPPRAL*THLCYS
Trigger: GCTATAGCAGAGATGCGTGCAAAGTGCTCTGGGAGG...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398486.2
ENST00000576967.6
CDS-3UTR GCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTCCTCCCAGAGCACTTTaGACGCATCTCTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLPPRAL*THLCYS
Trigger: GCTATAGCAGAGATGCGTGCAAAGTGCTCTGGGAGG...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398486.2
ENST00000576967.6
CDS-3UTR GCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTGAAACGTCGTTCAACTaGCTCATGTGGAGATGTGGC +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLETSFN*LMWRCG
Trigger: GCCACATCTCCACATGAGGCAGTTGAACGACGTTTC...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398486.2
ENST00000576967.6
CDS-3UTR GCA 90 bp TCTGCGATTGTTGGCAAGCACCGTTTCACACTGACAGCGCATCTCATCCAGGACCCTGCACAATATTCCTaGACCCAGCTATCACCAGAC +
Preference number: 4 (lower is better)
Translates to: SAIVGKHRFTLTAHLIQDPAQYS*TQLSPD
Trigger: GTCTGGTGATAGCTGGGTGCAGGAATATTGTGCAGG...GTCCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCCAGGAGAGCAGTGTGTaGAGGAGCAGTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASQESSV*RSSQKS
Trigger: TGACTTCTGACTGCTCCTCCACACACTGCTCTCCTG...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTCCCAGTAAAGTAGCATaGCAGGAGGCAACCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLPSKVA*QEATSQ
Trigger: CTGACTGGTTGCCTCCTGCCATGCTACTTTACTGGG...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCCCCAGTAAAGTAGCATaGCAGGAGGCAACCAGTCAG +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASPSKVA*QEATSQ
Trigger: CTGACTGGTTGCCTCCTGCCATGCTACTTTACTGGG...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCTCAGCCTCTAACAGCTaGCGAAGGGACAGTTCACTC +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASSASNS*RRDSSL
Trigger: GAGTGAACTGTCCCTTCGCCAGCTGTTAGAGGCTGA...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGTTTGTGCTTCCGGTTTaGATGTCCCTGGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRFVLPV*MSLVEA
Trigger: GGCTTCAACCAGGGACATCCAAACCGGAAGCACAAA...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTGATATGAGAGCCTCCTaGATTTGTGCTTCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPDMRAS*ICASGL
Trigger: CAAACCGGAAGCACAAATCCAGGAGGCTCTCATATC...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp TGGACAGTTGCTGCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGTCCCATGCAGGCTGCTaGTGTCAGCCTCTAACAGCT +
Preference number: 4 (lower is better)
Translates to: WTVAADSALLSEQPTILQSHAGC*CQPLTA
Trigger: AGCTGTTAGAGGCTGACATCAGCAGCCTGCATGGGA...CTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGCAGCAACTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR TCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGGTAAAGCAGAAAGACTaGGGATACCTGGAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRVKQKD*GYLEGN
Trigger: ATTGCCCTCCAGGTATCCTCAGTCTTTCTGCTTTAC...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCAGATTGCCTGGGCTaGATCTCTTTTCACCACTTA +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPSDCLG*ISFHHL
Trigger: TAAGTGGTGAAAAGAGATTCAGCCCAGGCAATCTGA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTGATTCTGTCAGGCTTTaGTGTGCTTGGAGCTCAATT +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPDSVRL*CAWSSI
Trigger: AATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATC...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTAAGTGTTGCTCGAGGTaGATGTGGTCGAACATGGGC +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICKCCSR*MWSNMG
Trigger: GCCCATGTTCGACCACATGCACCTCGAGCAACACTT...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCAAGTGTTGCTCGAGGTaGATGTGGTCGAACATGGGC +
Preference number: 4 (lower is better)
Translates to: AFQRFCQALLCLELNFQSKCCSR*MWSNMG
Trigger: GCCCATGTTCGACCACATGCACCTCGAGCAACACTT...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCCCTGCACAATATTCCTaGACCCAGCTATCACCAGAC +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASPAQYS*TQLSPD
Trigger: GTCTGGTGATAGCTGGGTGCAGGAATATTGTGCAGG...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
CDS-3UTR CCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTCAGGAGAGCAGTGTGTaGAGGAGCAGTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICQESSV*RSSQKS
Trigger: TGACTTCTGACTGCTCCTCCACACACTGCTCTCCTG...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCAAGCACCGTTTCACACTCCCAGTAAAGTAGCATaGCAGGAGGCAACCAGTCAG +
Preference number: 4 (lower is better)
Translates to: QPTILQLLCDCWQAPFHTPSKVA*QEATSQ
Trigger: CTGACTGGTTGCCTCCTGCCATGCTACTTTACTGGG...AGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTCCCAGTAAAGTAGCATaGCAGGAGGCAACCAGTCAG +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICPSKVA*QEATSQ
Trigger: CTGACTGGTTGCCTCCTGCCATGCTACTTTACTGGG...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGATTGTTCTTGGATCCTaGATTCCAGCTCTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRIVLGS*IPALRW
Trigger: CCAACGCAGAGCTGGAATCCAGGATCCAAGAACAAT...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTATCCGGGCACACCATTaGGATATCCTGTTCACATTG +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLIRAHH*DILFTL
Trigger: CAATGTGAACAGGATATCCCAATGGTGTGCCCGGAT...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTTCAGCCTCTAACAGCTaGCGAAGGGACAGTTCACTC +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICSASNS*RRDSSL
Trigger: GAGTGAACTGTCCCTTCGCCAGCTGTTAGAGGCTGA...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTTCAGAGACTCCACATaGGCCTCCAGATCAGATTTG +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLFRDST*ASRSDL
Trigger: CAAATCTGATCTGGAGGCCCATGTGGAGTCTCTGAA...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCTTCTCTGCGATTGTTaGCAAGCACCGTTTCACACT +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLLLCDC*QAPFHT
Trigger: AGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAG...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCAATTTCCAGAGCACTaGCTGTGCGTTTCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLQFPEH*LCVSVP
Trigger: TGGAACTGAAACGCACAGCCAGTGCTCTGGAAATTG...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGCAATTTCCAGAGCACTaGCTGTGCGTTTCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRQFPEH*LCVSVP
Trigger: TGGAACTGAAACGCACAGCCAGTGCTCTGGAAATTG...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTAGGCTTTGCTGTGCTTaGAGCTCAATTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLRLCCA*SSISRA
Trigger: TGCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCT...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGAGGCTTTGCTGTGCTTaGAGCTCAATTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRRLCCA*SSISRA
Trigger: TGCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCT...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp GCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGCTCGAGGTGCATGTaGTCGAACATGGGCTACAGG +
Preference number: 4 (lower is better)
Translates to: ADSALLSEQPTILQLLCDCSRCM*SNMGYR
Trigger: CCTGTAGCCCATGTTCGACCACATGCACCTCGAGCA...ATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGAGTCATCCTTCTTCATaGTCCAGGACACATAGCCCT +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRSHPSS*SRTHSP
Trigger: AGGGCTATGTGTCCTGGACCATGAAGAAGGATGACT...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
CDS-3UTR CCA 90 bp TCTGCGATTGTTGGCAAGCACCGTTTCACACTGACAGCGCATCTCATCCAGGACAGTCATCCTTCTTCATaGTCCAGGACACATAGCCCT +
Preference number: 4 (lower is better)
Translates to: SAIVGKHRFTLTAHLIQDSHPSS*SRTHSP
Trigger: AGGGCTATGTGTCCTGGACCATGAAGAAGGATGACT...GTCCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp TCGGTTTCTGCCACGGTGCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGACCTTCAGCTTTCTaGGCTCACTTCCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: SVSATVHSRDSVRLCCAWRPSAF*AHFLMF
Trigger: GAACATCAGGAAGTGAGCCCAGAAAGCTGAAGGTCT...CCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGCACCGTGGCAGAAACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR TCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTCACTCTCGTACTTTaGCTTAAAGTCATCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPFTLVL*LKVISG
Trigger: GCCACTGATGACTTTAAGTCAAAGTACGAGAGTGAA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTGTTCACGAAGCAAGTTaGCTTCCTCTTCATGGTTTT +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPVHEAS*LPLHGF
Trigger: AAAACCATGAAGAGGAAGTCAACTTGCTTCGTGAAC...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398486.2
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACCATCCAGGACCCTGTTaGGGTCAAGGGTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDHPGPC*GQGWGQ
Trigger: CTGCCCCCACCCTTGACCTCAACAGGGTCCTGGATG...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCTTTCAACAGTGCAGATaGCATAGGCTGAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASFQQCR*HRLSMA
Trigger: AGCCATGCTCAGCCTATGTCATCTGCACTGTTGAAA...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTTTTCAACAGTGCAGATaGCATAGGCTGAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLFQQCR*HRLSMA
Trigger: AGCCATGCTCAGCCTATGTCATCTGCACTGTTGAAA...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTAAAAGTGTGAGATTTTaGTTCAGATTGCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPKSVRF*FRLPGL
Trigger: CAGCCCAGGCAATCTGAATCAAAATCTCACACTTTT...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR TCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTAGCAAGTTGACTTCCTaGAAGTGGGATGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLSKLTS*KWDGVK
Trigger: CTTTACACCATCCCACTTTCAGGAAGTCAACTTGCT...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTCATCAGTGGCCAGTTTaGAGTTGTCAAGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLHQWPV*SCQAVQ
Trigger: CTGTACAGCTTGACAACTGCAAACTGGCCACTGATG...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTATTCTTCAGCTTCTCTaGGATTGTTGGCAAGCACCG +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLILQLL*DCWQAP
Trigger: CGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAAT...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTCCAGAGCACTGGCTGTaGGTTTCAGTTCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICPEHWL*VSVPRS
Trigger: AGATCTTGGAACTGAAACGCACAGCCAGTGCTCTGG...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCTGTCAGGCTTTGCTGTaGTTGGAGCTCAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASCQALL*LELNFQ
Trigger: CTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACA...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCCGGTTTCTGCCACGGTaGATTCCAGAGATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QLFCLNSQPFFSFSAIVGRFLPR*IPEILS
Trigger: TGACAGAATCTCTGGAATGCACCGTGGCAGAAACCG...GCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp TGGACAGTTGCTGCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGATGGCTCACAAGTGTTaGTCGAGGTGCATGTGGTCG +
Preference number: 4 (lower is better)
Translates to: WTVAADSALLSEQPTILQMAHKC*SRCMWS
Trigger: CGACCACATGCACCTCGAGCAACACTTGTGAGCCAT...CTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGCAGCAACTGTCCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTGGAGATGAGCAAGAATaGTTTATGGGCTTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPGDEQE*FMGFQY
Trigger: ATACTGGAAGCCCATAAAGCATTCTTGCTCATCTCC...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTGTTCACATTGTTCTTaGATCCTGGATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPCSHCS*ILDSSS
Trigger: AGAGCTGGAATCCAGGATCCAAGAACAATGTGAACA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTATCCGGGCACACCATTaGGATATCCTGTTCACATTG +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLIRAHH*DILFTL
Trigger: CAATGTGAACAGGATATCCCAATGGTGTGCCCGGAT...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCCTTCTCTGCGATTGTTaGCAAGCACCGTTTCACACT +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASLLCDC*QAPFHT
Trigger: AGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAG...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTCTTCTCTGCGATTGTTaGCAAGCACCGTTTCACACT +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLLLCDC*QAPFHT
Trigger: AGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAG...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp TCTGCGATTGTTGGCAAGCACCGTTTCACACTGACAGCGCATCTCATCCAGGACAAGACTGAGGATACCTaGAGGGCAATTCCAGGATAT +
Preference number: 4 (lower is better)
Translates to: SAIVGKHRFTLTAHLIQDKTEDT*RAIPGY
Trigger: ATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCTT...GTCCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR TCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTTCACTCTCGTACTTTaGCTTAAAGTCATCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLFTLVL*LKVISG
Trigger: GCCACTGATGACTTTAAGTCAAAGTACGAGAGTGAA...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGTTCACTCTCGTACTTTaGCTTAAAGTCATCAGTGGC +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRFTLVL*LKVISG
Trigger: GCCACTGATGACTTTAAGTCAAAGTACGAGAGTGAA...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTGTTCACGAAGCAAGTTaGCTTCCTCTTCATGGTTTT +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLVHEAS*LPLHGF
Trigger: AAAACCATGAAGAGGAAGTCAACTTGCTTCGTGAAC...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398486.2
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACTGTCCAGCTCCACACTaGGGCGGTCGCCAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDCPAPH*GGRQAV
Trigger: AACAGCTTGGCGACCGCCTCAGTGTGGAGCTGGACA...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTTTTCAACAGTGCAGATaGCATAGGCTGAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICFQQCR*HRLSMA
Trigger: AGCCATGCTCAGCCTATGTCATCTGCACTGTTGAAA...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGTAAAGCAGAAAGACTaGGGATACCTGGAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICVKQKD*GYLEGN
Trigger: ATTGCCCTCCAGGTATCCTCAGTCTTTCTGCTTTAC...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTTCAGATTGCCTGGGCTaGATCTCTTTTCACCACTTA +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLSDCLG*ISFHHL
Trigger: TAAGTGGTGAAAAGAGATTCAGCCCAGGCAATCTGA...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTCATCAGTGGCCAGTTTaGAGTTGTCAAGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICHQWPV*SCQAVQ
Trigger: CTGTACAGCTTGACAACTGCAAACTGGCCACTGATG...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCCATCAGTGGCCAGTTTaGAGTTGTCAAGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: AFQRFCQALLCLELNFQSHQWPV*SCQAVQ
Trigger: CTGTACAGCTTGACAACTGCAAACTGGCCACTGATG...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTATTCTTCAGCTTCTCTaGGATTGTTGGCAAGCACCG +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICILQLL*DCWQAP
Trigger: CGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAAT...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp GCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATCCAGAGCACTGGCTGTaGGTTTCAGTTCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: ADSALLSEQPTILQLLCDPEHWL*VSVPRS
Trigger: AGATCTTGGAACTGAAACGCACAGCCAGTGCTCTGG...ATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp CAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCAAGCACCGTTTCACACTTGTCAGGCTTTGCTGTaGTTGGAGCTCAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: QPTILQLLCDCWQAPFHTCQALL*LELNFQ
Trigger: CTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACA...AGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGATTCTGTCAGGCTTTaGTGTGCTTGGAGCTCAATT +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASDSVRL*CAWSSI
Trigger: AATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATC...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTATTGTTCTTGGATCCTaGATTCCAGCTCTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICIVLGS*IPALRW
Trigger: CCAACGCAGAGCTGGAATCCAGGATCCAAGAACAAT...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp TCGGTTTCTGCCACGGTGCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGTGTTCACATTGTTCTTaGATCCTGGATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SVSATVHSRDSVRLCCAWCSHCS*ILDSSS
Trigger: AGAGCTGGAATCCAGGATCCAAGAACAATGTGAACA...CCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGCACCGTGGCAGAAACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp CAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCATCCGGGCACACCATTaGGATATCCTGTTCACATTG +
Preference number: 4 (lower is better)
Translates to: QLFCLNSQPFFSFSAIVGIRAHH*DILFTL
Trigger: CAATGTGAACAGGATATCCCAATGGTGTGCCCGGAT...GCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTTTCAGAGACTCCACATaGGCCTCCAGATCAGATTTG +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICFRDST*ASRSDL
Trigger: CAAATCTGATCTGGAGGCCCATGTGGAGTCTCTGAA...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCCTTCTCTGCGATTGTTaGCAAGCACCGTTTCACACT +
Preference number: 4 (lower is better)
Translates to: AFQRFCQALLCLELNFQSLLCDC*QAPFHT
Trigger: AGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAG...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTCAATTTCCAGAGCACTaGCTGTGCGTTTCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICQFPEH*LCVSVP
Trigger: TGGAACTGAAACGCACAGCCAGTGCTCTGGAAATTG...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTAGGCTTTGCTGTGCTTaGAGCTCAATTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICRLCCA*SSISRA
Trigger: TGCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCT...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCAGGCTTTGCTGTGCTTaGAGCTCAATTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: QLFCLNSQPFFSFSAIVGRLCCA*SSISRA
Trigger: TGCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCT...GCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCAGGCTTTGCTGTGCTTaGAGCTCAATTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: AFQRFCQALLCLELNFQSRLCCA*SSISRA
Trigger: TGCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCT...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp TGGACAGTTGCTGCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGTTTGTGCTTCCGGTTTaGATGTCCCTGGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: WTVAADSALLSEQPTILQFVLPV*MSLVEA
Trigger: GGCTTCAACCAGGGACATCCAAACCGGAAGCACAAA...CTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGCAGCAACTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGATATGAGAGCCTCCTaGATTTGTGCTTCCGGTTTG +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICDMRAS*ICASGL
Trigger: CAAACCGGAAGCACAAATCCAGGAGGCTCTCATATC...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTAGTCATCCTTCTTCATaGTCCAGGACACATAGCCCT +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICSHPSS*SRTHSP
Trigger: AGGGCTATGTGTCCTGGACCATGAAGAAGGATGACT...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
CDS-3UTR CCA 90 bp TCGGTTTCTGCCACGGTGCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGTTGATTCAGATTGCCTaGGCTGAATCTCTTTTCACC +
Preference number: 4 (lower is better)
Translates to: SVSATVHSRDSVRLCCAWLIQIA*AESLFT
Trigger: GGTGAAAAGAGATTCAGCCCAGGCAATCTGAATCAA...CCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGCACCGTGGCAGAAACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR TCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTGATCTTCAATGGTGTTaGAGTAACGCTGATAATCCG +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLDLQWC*SNADNP
Trigger: CGGATTATCAGCGTTACTTCAACACCATTGAAGATC...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGATCTTCAATGGTGTTaGAGTAACGCTGATAATCCG +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASDLQWC*SNADNP
Trigger: CGGATTATCAGCGTTACTTCAACACCATTGAAGATC...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCTTCACTCTCGTACTTTaGCTTAAAGTCATCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASFTLVL*LKVISG
Trigger: GCCACTGATGACTTTAAGTCAAAGTACGAGAGTGAA...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGTTCACGAAGCAAGTTaGCTTCCTCTTCATGGTTTT +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASVHEAS*LPLHGF
Trigger: AAAACCATGAAGAGGAAGTCAACTTGCTTCGTGAAC...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398486.2
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACTCCTCCAGGATCCCATaGAGGCTGCTGATGTCAGCC +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDSSRIP*RLLMSA
Trigger: GGCTGACATCAGCAGCCTGCATGGGATCCTGGAGGA...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp GCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATATTCTTCAGCTTCTCTaGGATTGTTGGCAAGCACCG +
Preference number: 4 (lower is better)
Translates to: ADSALLSEQPTILQLLCDILQLL*DCWQAP
Trigger: CGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAAT...ATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp TGGACAGTTGCTGCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGTGTCAGGCTTTGCTGTaGTTGGAGCTCAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: WTVAADSALLSEQPTILQCQALL*LELNFQ
Trigger: CTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACA...CTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGCAGCAACTGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCGATTCTGTCAGGCTTTaGTGTGCTTGGAGCTCAATT +
Preference number: 4 (lower is better)
Translates to: AFQRFCQALLCLELNFQSDSVRL*CAWSSI
Trigger: AATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATC...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp CAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCGATTCTGTCAGGCTTTaGTGTGCTTGGAGCTCAATT +
Preference number: 4 (lower is better)
Translates to: QLFCLNSQPFFSFSAIVGDSVRL*CAWSSI
Trigger: AATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATC...GCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACGGCTACAGGAAAGCCTaGTGTCCTCGCTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDGYRKA*CPRCPA
Trigger: TGCTGGACAGCGAGGACAGCAGGCTTTCCTGTAGCC...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp TGGACAGTTGCTGCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGATTGTTCTTGGATCCTaGATTCCAGCTCTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: WTVAADSALLSEQPTILQIVLGS*IPALRW
Trigger: CCAACGCAGAGCTGGAATCCAGGATCCAAGAACAAT...CTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGCAGCAACTGTCCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTTGTTCACATTGTTCTTaGATCCTGGATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLCSHCS*ILDSSS
Trigger: AGAGCTGGAATCCAGGATCCAAGAACAATGTGAACA...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp GCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTTCAGAGACTCCACATaGGCCTCCAGATCAGATTTG +
Preference number: 4 (lower is better)
Translates to: ADSALLSEQPTILQLLCDFRDST*ASRSDL
Trigger: CAAATCTGATCTGGAGGCCCATGTGGAGTCTCTGAA...ATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACGCAGCTGCTCCGCGCTaGACAGTTGCTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDAAAPR*TVAADS
Trigger: TGAATCAGCAGCAACTGTCCAGCGCGGAGCAGCTGC...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTAAGACTGAGGATACCTaGAGGGCAATTCCAGGATAT +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICKTEDT*RAIPGY
Trigger: ATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCTT...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp GCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATAGACCTTCAGCTTTCTaGGCTCACTTCCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: ADSALLSEQPTILQLLCDRPSAF*AHFLMF
Trigger: GAACATCAGGAAGTGAGCCCAGAAAGCTGAAGGTCT...ATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTTTGATTCAGATTGCCTaGGCTGAATCTCTTTTCACC +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLLIQIA*AESLFT
Trigger: GGTGAAAAGAGATTCAGCCCAGGCAATCTGAATCAA...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR TCA 90 bp CAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCGATCTTCAATGGTGTTaGAGTAACGCTGATAATCCG +
Preference number: 4 (lower is better)
Translates to: QLFCLNSQPFFSFSAIVGDLQWC*SNADNP
Trigger: CGGATTATCAGCGTTACTTCAACACCATTGAAGATC...GCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR TCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGATCTTCAATGGTGTTaGAGTAACGCTGATAATCCG +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICDLQWC*SNADNP
Trigger: CGGATTATCAGCGTTACTTCAACACCATTGAAGATC...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTTTCACTCTCGTACTTTaGCTTAAAGTCATCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RLRIPGGQFQDMRASWICFTLVL*LKVISG
Trigger: GCCACTGATGACTTTAAGTCAAAGTACGAGAGTGAA...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACAGCACCGTTTCACACTaGCAGCGCATCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDSTVSH*QRISSR
Trigger: CCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCT...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp TCGGTTTCTGCCACGGTGCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGGGTTATGGGTTTAGATaGTTTCCTTGCCATAAAATG +
Preference number: 4 (lower is better)
Translates to: SVSATVHSRDSVRLCCAWGYGFR*FPCHKM
Trigger: CATTTTATGGCAAGGAAATCATCTAAACCCATAACC...CCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGCACCGTGGCAGAAACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR TCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTGGTTATGGGTTTAGATaGTTTCCTTGCCATAAAATG +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLGYGFR*FPCHKM
Trigger: CATTTTATGGCAAGGAAATCATCTAAACCCATAACC...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461923.5
ENST00000576064.5
ENST00000610983.1
CDS-3UTR CCA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTCATAAGATCTTTTGTTaGAGATCTTCAATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPHKIFC*RSSMVL
Trigger: CAACACCATTGAAGATCTCCAACAAAAGATCTTATG...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACAGGAAGCTTGGAGTCTaGCATCGGGATGTAGCACAG +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDRKLGV*HRDVAQ
Trigger: CTGTGCTACATCCCGATGTCAGACTCCAAGCTTCCT...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR TCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTGGTTATGGGTTTAGATaGTTTCCTTGCCATAAAATG +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLGYGFR*FPCHKM
Trigger: CATTTTATGGCAAGGAAATCATCTAAACCCATAACC...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000461923.5
ENST00000576064.5
ENST00000610983.1
CDS-3UTR GCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGAATTCTCTGCTTTCGTaGATAAGATCTTTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRNSLLS*IRSFVG
Trigger: TCCAACAAAAGATCTTATGCACGAAAGCAGAGAATT...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACATGGCTCACAAGTGTTaGTCGAGGTGCATGTGGTCG +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDMAHKC*SRCMWS
Trigger: CGACCACATGCACCTCGAGCAACACTTGTGAGCCAT...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACAGCCTCCTGGATTTGTaGTTCCGGTTTGGATGTCCC +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDSLLDL*FRFGCP
Trigger: GGGACATCCAAACCGGAAGCACAAATCCAGGAGGCT...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCATAAGATCTTTTGTTaGAGATCTTCAATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLHKIFC*RSSMVL
Trigger: CAACACCATTGAAGATCTCCAACAAAAGATCTTATG...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGCATAAGATCTTTTGTTaGAGATCTTCAATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRHKIFC*RSSMVL
Trigger: CAACACCATTGAAGATCTCCAACAAAAGATCTTATG...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTAATTCTCTGCTTTCGTaGATAAGATCTTTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLNSLLS*IRSFVG
Trigger: TCCAACAAAAGATCTTATGCACGAAAGCAGAGAATT...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCAATTCTCTGCTTTCGTaGATAAGATCTTTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: RIPGGQFQDMRASWICASNSLLS*IRSFVG
Trigger: TCCAACAAAAGATCTTATGCACGAAAGCAGAGAATT...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACCCAGAGCACTGGCTGTaGGTTTCAGTTCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDPEHWL*VSVPRS
Trigger: AGATCTTGGAACTGAAACGCACAGCCAGTGCTCTGG...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACCGGTTTCTGCCACGGTaGATTCCAGAGATTCTGTCA +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDRFLPR*IPEILS
Trigger: TGACAGAATCTCTGGAATGCACCGTGGCAGAAACCG...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACGAAACGTCGTTCAACTaGCTCATGTGGAGATGTGGC +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDETSFN*LMWRCG
Trigger: GCCACATCTCCACATGAGGCAGTTGAACGACGTTTC...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398486.2
ENST00000576967.6
CDS-3UTR TCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACTTTCAACAGTGCAGATaGCATAGGCTGAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDFQQCR*HRLSMA
Trigger: AGCCATGCTCAGCCTATGTCATCTGCACTGTTGAAA...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR GCA 90 bp CAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCAATTCTCTGCTTTCGTaGATAAGATCTTTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: QLFCLNSQPFFSFSAIVGNSLLS*IRSFVG
Trigger: TCCAACAAAAGATCTTATGCACGAAAGCAGAGAATT...GCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR GCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACTGTCAGGCTTTGCTGTaGTTGGAGCTCAATTTCCAG +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDCQALL*LELNFQ
Trigger: CTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACA...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CCA 90 bp CAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCAAGCACCGTTTCACACTCATAAGATCTTTTGTTaGAGATCTTCAATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: QPTILQLLCDCWQAPFHTHKIFC*RSSMVL
Trigger: CAACACCATTGAAGATCTCCAACAAAAGATCTTATG...AGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACAGTCATCCTTCTTCATaGTCCAGGACACATAGCCCT +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDSHPSS*SRTHSP
Trigger: AGGGCTATGTGTCCTGGACCATGAAGAAGGATGACT...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
CDS-3UTR GCA 90 bp GCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATAATTCTCTGCTTTCGTaGATAAGATCTTTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: ADSALLSEQPTILQLLCDNSLLS*IRSFVG
Trigger: TCCAACAAAAGATCTTATGCACGAAAGCAGAGAATT...ATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CCA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACTGTTCACATTGTTCTTaGATCCTGGATTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDCSHCS*ILDSSS
Trigger: AGAGCTGGAATCCAGGATCCAAGAACAATGTGAACA...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS TCA 90 bp TGTAGCACAGGTACCGGGGAGACAAGCTGTTTCCACGGAGCAGCTTaGGGCAGGTGCACAACCGGAAGCCGTGCCACAGGACTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: CSTGTGETSCFHGAA*GRCTTGSRATGLRR
Trigger: TCTCCTGAGTCCTGTGGCACGGCTTCCGGTTGTGCACCTGCCTCAAGCTGCTCCGTGGAAACAGCTTGTCTCCCCGGTACCTGTGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377755.9
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
ENST00000684280.1
CDS TCA 90 bp AGGCAACCAGTCAGCCCGCGAGACCTGGATAGGAAGCTTGGAGTCTaGCATCGGGATGTAGCACAGGTACCGGGGAGACAAGCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: RQPVSPRDLDRKLGV*HRDVAQVPGRQAVS
Trigger: GGAAACAGCTTGTCTCCCCGGTACCTGTGCTACATCCCGATGTCAGACTCCAAGCTTCCTATCCAGGTCTCGCGGGCTGACTGGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377755.9
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
ENST00000684280.1
CDS-3UTR CAA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCATCCAGGACCCTGTaGAGGTCAAGGGTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPSSRTL*RSRVGA
Trigger: TGCCCCCACCCTTGACCTCAACAGGGTCCTGGATGA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTCATCCAGGACCCTGTaGAGGTCAAGGGTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLSSRTL*RSRVGA
Trigger: TGCCCCCACCCTTGACCTCAACAGGGTCCTGGATGA...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTCTCCGCGCTGGACAGTaGCTGCTGATTCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPLRAGQ*LLIQLF
Trigger: GAAGAGCTGAATCAGCAGCAACTGTCCAGCGCGGAG...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTTTTCCACGGAGCAGCTaGAGGCAGGTGCACAACCGG +
Preference number: 5 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLFPRSS*RQVHNR
Trigger: CCGGTTGTGCACCTGCCTCAAGCTGCTCCGTGGAAA...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCTTTCCACGGAGCAGCTaGAGGCAGGTGCACAACCGG +
Preference number: 5 (lower is better)
Translates to: RIPGGQFQDMRASWICASFPRSS*RQVHNR
Trigger: CCGGTTGTGCACCTGCCTCAAGCTGCTCCGTGGAAA...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TCTGCGATTGTTGGCAAGCACCGTTTCACACTGACAGCGCATCTCATCCAGGACCTCCGCGCTGGACAGTaGCTGCTGATTCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: SAIVGKHRFTLTAHLIQDLRAGQ*LLIQLF
Trigger: GAAGAGCTGAATCAGCAGCAACTGTCCAGCGCGGAG...GTCCTGGATGAGATGCGCTGTCAGTGTGAAACGGTGCTTGCCAACAATCGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCTCCGCGCTGGACAGTaGCTGCTGATTCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLLRAGQ*LLIQLF
Trigger: GAAGAGCTGAATCAGCAGCAACTGTCCAGCGCGGAG...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTTTTCCACGGAGCAGCTaGAGGCAGGTGCACAACCGG +
Preference number: 5 (lower is better)
Translates to: RLRIPGGQFQDMRASWICFPRSS*RQVHNR
Trigger: CCGGTTGTGCACCTGCCTCAAGCTGCTCCGTGGAAA...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCTTTCCACGGAGCAGCTaGAGGCAGGTGCACAACCGG +
Preference number: 5 (lower is better)
Translates to: AFQRFCQALLCLELNFQSFPRSS*RQVHNR
Trigger: CCGGTTGTGCACCTGCCTCAAGCTGCTCCGTGGAAA...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTGCTTCTCTGCGATTGTaGGCAAGCACCGTTTCACAC +
Preference number: 5 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPASLRL*ASTVSH
Trigger: GTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGC...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTCAGGCTTTGCTGTGCTaGGAGCTCAATTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPQALLC*ELNFQS
Trigger: GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTG...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TCGGTTTCTGCCACGGTGCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGCATGGCTCACAAGTGTaGCTCGAGGTGCATGTGGTC +
Preference number: 5 (lower is better)
Translates to: SVSATVHSRDSVRLCCAWHGSQV*LEVHVV
Trigger: GACCACATGCACCTCGAGCAACACTTGTGAGCCATG...CCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGCACCGTGGCAGAAACCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTGAGAGCCTCCTGGATTaGTGCTTCCGGTTTGGATGT +
Preference number: 5 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPESLLD*CFRFGC
Trigger: ACATCCAAACCGGAAGCACAAATCCAGGAGGCTCTC...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTACCTGGATAGGAAGCTaGGAGTCTGACATCGGGATG +
Preference number: 5 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLTWIGS*ESDIGM
Trigger: CATCCCGATGTCAGACTCCAAGCTTCCTATCCAGGT...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TCGGTTTCTGCCACGGTGCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGACCTGGATAGGAAGCTaGGAGTCTGACATCGGGATG +
Preference number: 5 (lower is better)
Translates to: SVSATVHSRDSVRLCCAWTWIGS*ESDIGM
Trigger: CATCCCGATGTCAGACTCCAAGCTTCCTATCCAGGT...CCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGCACCGTGGCAGAAACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTATCGTCTCCTTCTCATaGCTAGTGAACACCCCATCC +
Preference number: 5 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPIVSFS*LVNTPS
Trigger: GGATGGGGTGTTCACTAGCAATGAGAAGGAGACGAT...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTGTGGCCAGTTTGCAGTaGTCAAGCTGTACAGCAAGT +
Preference number: 5 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPVASLQ*SSCTAS
Trigger: ACTTGCTGTACAGCTTGACAACTGCAAACTGGCCAC...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TGGACAGTTGCTGCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGTCATCCAGGACCCTGTaGAGGTCAAGGGTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: WTVAADSALLSEQPTILQSSRTL*RSRVGA
Trigger: TGCCCCCACCCTTGACCTCAACAGGGTCCTGGATGA...CTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGCAGCAACTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCAGCTTCTCTGCGATaGTTGGCAAGCACCGTTTCA +
Preference number: 5 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPSASLR*LASTVS
Trigger: TGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCCTCCGCGCTGGACAGTaGCTGCTGATTCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: AFQRFCQALLCLELNFQSLRAGQ*LLIQLF
Trigger: GAAGAGCTGAATCAGCAGCAACTGTCCAGCGCGGAG...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTCTCCGCGCTGGACAGTaGCTGCTGATTCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RLRIPGGQFQDMRASWICLRAGQ*LLIQLF
Trigger: GAAGAGCTGAATCAGCAGCAACTGTCCAGCGCGGAG...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TCGGTTTCTGCCACGGTGCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGCAGGCTTTGCTGTGCTaGGAGCTCAATTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: SVSATVHSRDSVRLCCAWQALLC*ELNFQS
Trigger: GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTG...CCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGCACCGTGGCAGAAACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGCAGGCTTTGCTGTGCTaGGAGCTCAATTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRQALLC*ELNFQS
Trigger: GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTG...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTCATGGCTCACAAGTGTaGCTCGAGGTGCATGTGGTC +
Preference number: 5 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLHGSQV*LEVHVV
Trigger: GACCACATGCACCTCGAGCAACACTTGTGAGCCATG...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGAGGATGCTGCTGGCTTaGATTCCTCTACCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRRMLLA*IPLPAV
Trigger: GACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCT...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TCGGTTTCTGCCACGGTGCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGGATGCTGCTGGCTTaGATTCCTCTACCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: SVSATVHSRDSVRLCCAWRMLLA*IPLPAV
Trigger: GACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCT...CCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGCACCGTGGCAGAAACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTTGGATGTCCCTGGTaGAAGCCCCATCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPFGCPW*KPHLLS
Trigger: AGAAAGGAGATGGGGCTTCAACCAGGGACATCCAAA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGGAGAGCCTCCTGGATTaGTGCTTCCGGTTTGGATGT +
Preference number: 5 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRESLLD*CFRFGC
Trigger: ACATCCAAACCGGAAGCACAAATCCAGGAGGCTCTC...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTACCTGGATAGGAAGCTaGGAGTCTGACATCGGGATG +
Preference number: 5 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLTWIGS*ESDIGM
Trigger: CATCCCGATGTCAGACTCCAAGCTTCCTATCCAGGT...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGATCGTCTCCTTCTCATaGCTAGTGAACACCCCATCC +
Preference number: 5 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRIVSFS*LVNTPS
Trigger: GGATGGGGTGTTCACTAGCAATGAGAAGGAGACGAT...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGGTGGCCAGTTTGCAGTaGTCAAGCTGTACAGCAAGT +
Preference number: 5 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRVASLQ*SSCTAS
Trigger: ACTTGCTGTACAGCTTGACAACTGCAAACTGGCCAC...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTGTGGCCAGTTTGCAGTaGTCAAGCTGTACAGCAAGT +
Preference number: 5 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLVASLQ*SSCTAS
Trigger: ACTTGCTGTACAGCTTGACAACTGCAAACTGGCCAC...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTCATCAGTGGCCAGTTaGCAGTTGTCAAGCTGTACA +
Preference number: 5 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPSSVAS*QLSSCT
Trigger: TGTACAGCTTGACAACTGCAAACTGGCCACTGATGA...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTCAGCTTCTCTGCGATaGTTGGCAAGCACCGTTTCA +
Preference number: 5 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLSASLR*LASTVS
Trigger: TGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGA...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGTCAGCTTCTCTGCGATaGTTGGCAAGCACCGTTTCA +
Preference number: 5 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRSASLR*LASTVS
Trigger: TGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGA...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTAGATTCTGTCAGGCTTaGCTGTGCTTGGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPRFCQA*LCLELN
Trigger: ATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCT...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCAAGCACCGTTTCACACTCATGGCTCACAAGTGTaGCTCGAGGTGCATGTGGTC +
Preference number: 5 (lower is better)
Translates to: QPTILQLLCDCWQAPFHTHGSQV*LEVHVV
Trigger: GACCACATGCACCTCGAGCAACACTTGTGAGCCATG...AGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCAGGATGCTGCTGGCTTaGATTCCTCTACCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: RIPGGQFQDMRASWICASRMLLA*IPLPAV
Trigger: GACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCT...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTACCTGGATAGGAAGCTaGGAGTCTGACATCGGGATG +
Preference number: 5 (lower is better)
Translates to: RLRIPGGQFQDMRASWICTWIGS*ESDIGM
Trigger: CATCCCGATGTCAGACTCCAAGCTTCCTATCCAGGT...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTAATCCGGGCACACCATaGGGATATCCTGTTCACATT +
Preference number: 5 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLNPGTP*GYPVHI
Trigger: AATGTGAACAGGATATCCCAATGGTGTGCCCGGATT...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGTCATCAGTGGCCAGTTaGCAGTTGTCAAGCTGTACA +
Preference number: 5 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRSSVAS*QLSSCT
Trigger: TGTACAGCTTGACAACTGCAAACTGGCCACTGATGA...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTTCATCAGTGGCCAGTTaGCAGTTGTCAAGCTGTACA +
Preference number: 5 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLSSVAS*QLSSCT
Trigger: TGTACAGCTTGACAACTGCAAACTGGCCACTGATGA...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCGCTTCTCTGCGATTGTaGGCAAGCACCGTTTCACAC +
Preference number: 5 (lower is better)
Translates to: QLFCLNSQPFFSFSAIVGASLRL*ASTVSH
Trigger: GTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGC...GCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCTCTGCGATTGTaGGCAAGCACCGTTTCACAC +
Preference number: 5 (lower is better)
Translates to: RLRIPGGQFQDMRASWICASLRL*ASTVSH
Trigger: GTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGC...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTCAGGCTTTGCTGTGCTaGGAGCTCAATTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: RLRIPGGQFQDMRASWICQALLC*ELNFQS
Trigger: GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTG...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTTAGATTCTGTCAGGCTTaGCTGTGCTTGGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: LLDLCFRFGCPWLKPHLLRFCQA*LCLELN
Trigger: ATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCT...AAGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGAGAGCCTCCTGGATTaGTGCTTCCGGTTTGGATGT +
Preference number: 5 (lower is better)
Translates to: RLRIPGGQFQDMRASWICESLLD*CFRFGC
Trigger: ACATCCAAACCGGAAGCACAAATCCAGGAGGCTCTC...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCGAGAGCCTCCTGGATTaGTGCTTCCGGTTTGGATGT +
Preference number: 5 (lower is better)
Translates to: AFQRFCQALLCLELNFQSESLLD*CFRFGC
Trigger: ACATCCAAACCGGAAGCACAAATCCAGGAGGCTCTC...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCATCGTCTCCTTCTCATaGCTAGTGAACACCCCATCC +
Preference number: 5 (lower is better)
Translates to: AFQRFCQALLCLELNFQSIVSFS*LVNTPS
Trigger: GGATGGGGTGTTCACTAGCAATGAGAAGGAGACGAT...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTCTGTTCACATTGTTCTaGGATCCTGGATTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLLFTLF*DPGFQL
Trigger: GAGCTGGAATCCAGGATCCAAGAACAATGTGAACAG...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCGTGGCCAGTTTGCAGTaGTCAAGCTGTACAGCAAGT +
Preference number: 5 (lower is better)
Translates to: AFQRFCQALLCLELNFQSVASLQ*SSCTAS
Trigger: ACTTGCTGTACAGCTTGACAACTGCAAACTGGCCAC...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTTCAGCTTCTCTGCGATaGTTGGCAAGCACCGTTTCA +
Preference number: 5 (lower is better)
Translates to: RLRIPGGQFQDMRASWICSASLR*LASTVS
Trigger: TGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGA...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CCCCATCTCCTTTCTAGGATGCTGCTGGCTTTGATTCCTCTACCTGCTGTCCTTAGATTCTGTCAGGCTTaGCTGTGCTTGGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: PHLLSRMLLALIPLPAVLRFCQA*LCLELN
Trigger: ATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCT...AAGGACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCTAGAAAGGAGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCAGATTCTGTCAGGCTTaGCTGTGCTTGGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: RIPGGQFQDMRASWICASRFCQA*LCLELN
Trigger: ATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCT...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACTTTCCACGGAGCAGCTaGAGGCAGGTGCACAACCGG +
Preference number: 5 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDFPRSS*RQVHNR
Trigger: CCGGTTGTGCACCTGCCTCAAGCTGCTCCGTGGAAA...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTCTGTTCACATTGTTCTaGGATCCTGGATTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: RLRIPGGQFQDMRASWICLFTLF*DPGFQL
Trigger: GAGCTGGAATCCAGGATCCAAGAACAATGTGAACAG...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGGATATCCTGTTCACATaGTTCTTGGATCCTGGATTC +
Preference number: 5 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRDILFT*FLDPGF
Trigger: GAATCCAGGATCCAAGAACAATGTGAACAGGATATC...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTAATCCGGGCACACCATaGGGATATCCTGTTCACATT +
Preference number: 5 (lower is better)
Translates to: RLRIPGGQFQDMRASWICNPGTP*GYPVHI
Trigger: AATGTGAACAGGATATCCCAATGGTGTGCCCGGATT...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TGGACAGTTGCTGCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGGTGGCCAGTTTGCAGTaGTCAAGCTGTACAGCAAGT +
Preference number: 5 (lower is better)
Translates to: WTVAADSALLSEQPTILQVASLQ*SSCTAS
Trigger: ACTTGCTGTACAGCTTGACAACTGCAAACTGGCCAC...CTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGCAGCAACTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp GATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCGGTGTTCACGAAGCAAGTaGACTTCCTCTTCATGGTTT +
Preference number: 5 (lower is better)
Translates to: DTWRAIPGYESLLDLCFRCSRSK*TSSSWF
Trigger: AAACCATGAAGAGGAAGTCAACTTGCTTCGTGAACA...CCGGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398486.2
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TGGACAGTTGCTGCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGTCATCAGTGGCCAGTTaGCAGTTGTCAAGCTGTACA +
Preference number: 5 (lower is better)
Translates to: WTVAADSALLSEQPTILQSSVAS*QLSSCT
Trigger: TGTACAGCTTGACAACTGCAAACTGGCCACTGATGA...CTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGCAGCAACTGTCCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp AGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGCTTCCTGTTCACGAAGCAAGTaGACTTCCTCTTCATGGTTT +
Preference number: 5 (lower is better)
Translates to: RIPGGQFQDMRASWICASCSRSK*TSSSWF
Trigger: AAACCATGAAGAGGAAGTCAACTTGCTTCGTGAACA...GGAAGCACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398486.2
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CCTCCTGGATTTGTGCTTCCGGTTTGGATGTCCCTGGTTGAAGCCCCATCTCCTCTGGGTTTATGTACATaGAAACTATGGTTATGGGTT +
Preference number: 5 (lower is better)
Translates to: PPGFVLPVWMSLVEAPSPLGLCT*KLWLWV
Trigger: AACCCATAACCATAGTTTCAATGTACATAAACCCAG...AGGAGATGGGGCTTCAACCAGGGACATCCAAACCGGAAGCACAAATCCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000461923.5
ENST00000576064.5
ENST00000610983.1
CDS-3UTR CAA 90 bp GCATTCCAGAGATTCTGTCAGGCTTTGCTGTGCTTGGAGCTCAATTTCCAGAGCGATATCCTGTTCACATaGTTCTTGGATCCTGGATTC +
Preference number: 5 (lower is better)
Translates to: AFQRFCQALLCLELNFQSDILFT*FLDPGF
Trigger: GAATCCAGGATCCAAGAACAATGTGAACAGGATATC...GCTCTGGAAATTGAGCTCCAAGCACAGCAAAGCCTGACAGAATCTCTGGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTGATATCCTGTTCACATaGTTCTTGGATCCTGGATTC +
Preference number: 5 (lower is better)
Translates to: RLRIPGGQFQDMRASWICDILFT*FLDPGF
Trigger: GAATCCAGGATCCAAGAACAATGTGAACAGGATATC...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp AGACTGAGGATACCTGGAGGGCAATTCCAGGATATGAGAGCCTCCTGGATTTGTTGTTCACGAAGCAAGTaGACTTCCTCTTCATGGTTT +
Preference number: 5 (lower is better)
Translates to: RLRIPGGQFQDMRASWICCSRSK*TSSSWF
Trigger: AAACCATGAAGAGGAAGTCAACTTGCTTCGTGAACA...ACAAATCCAGGAGGCTCTCATATCCTGGAATTGCCCTCCAGGTATCCTCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398486.2
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACCATGGCTCACAAGTGTaGCTCGAGGTGCATGTGGTC +
Preference number: 5 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDHGSQV*LEVHVV
Trigger: GACCACATGCACCTCGAGCAACACTTGTGAGCCATG...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS CCA 90 bp ATCTTCAATGGTGTTGAAGTAACGCTGATAATCCGGGCACACCATTaGGATATCCTGTTCACATTGTTCTTGGATCCTGGATTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: IFNGVEVTLIIRAHH*DILFTLFLDPGFQL
Trigger: GAGCTGGAATCCAGGATCCAAGAACAATGTGAACAGGATATCCCAATGGTGTGCCCGGATTATCAGCGTTACTTCAACACCATTGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377755.9
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
ENST00000684280.1
CDS-3UTR CAA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACACCTGGATAGGAAGCTaGGAGTCTGACATCGGGATG +
Preference number: 5 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDTWIGS*ESDIGM
Trigger: CATCCCGATGTCAGACTCCAAGCTTCCTATCCAGGT...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACAGGATGCTGCTGGCTTaGATTCCTCTACCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDRMLLA*IPLPAV
Trigger: GACAGCAGGTAGAGGAATCAAAGCCAGCAGCATCCT...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACATCGTCTCCTTCTCATaGCTAGTGAACACCCCATCC +
Preference number: 5 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDIVSFS*LVNTPS
Trigger: GGATGGGGTGTTCACTAGCAATGAGAAGGAGACGAT...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACTTTGGATGTCCCTGGTaGAAGCCCCATCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDFGCPW*KPHLLS
Trigger: AGAAAGGAGATGGGGCTTCAACCAGGGACATCCAAA...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp CAGCCAACCATTCTTCAGCTTCTCTGCGATTGTTGGCAAGCACCGTTTCACACTCTGGGTTTATGTACATaGAAACTATGGTTATGGGTT +
Preference number: 5 (lower is better)
Translates to: QPTILQLLCDCWQAPFHTLGLCT*KLWLWV
Trigger: AACCCATAACCATAGTTTCAATGTACATAAACCCAG...AGTGTGAAACGGTGCTTGCCAACAATCGCAGAGAAGCTGAAGAATGGTTGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS-3UTR CAA 90 bp GCTGATTCAGCTCTTCTGTCTGAACAGCCAACCATTCTTCAGCTTCTCTGCGATTTCTACTTCTGTTTTTaGGAGCAGTGGGTAAAAGTG +
Preference number: 5 (lower is better)
Translates to: ADSALLSEQPTILQLLCDFYFCF*EQWVKV
Trigger: CACTTTTACCCACTGCTCCAAAAAACAGAAGTAGAA...ATCGCAGAGAAGCTGAAGAATGGTTGGCTGTTCAGACAGAAGAGCTGAATCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS TCA 90 bp CTGCTTTCGTGCATAAGATCTTTTGTTGGAGATCTTCAATGGTGTTaGAGTAACGCTGATAATCCGGGCACACCATTGGGATATCCTGTT +
Preference number: 5 (lower is better)
Translates to: LLSCIRSFVGDLQWC*SNADNPGTPLGYPV
Trigger: AACAGGATATCCCAATGGTGTGCCCGGATTATCAGCGTTACTTCAACACCATTGAAGATCTCCAACAAAAGATCTTATGCACGAAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377755.9
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
ENST00000684280.1
CDS-3UTR CAA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACAATCCGGGCACACCATaGGGATATCCTGTTCACATT +
Preference number: 5 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDNPGTP*GYPVHI
Trigger: AATGTGAACAGGATATCCCAATGGTGTGCCCGGATT...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACGATATCCTGTTCACATaGTTCTTGGATCCTGGATTC +
Preference number: 5 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDDILFT*FLDPGF
Trigger: GAATCCAGGATCCAAGAACAATGTGAACAGGATATC...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
CDS-3UTR CAA 90 bp TTCCAGTATACCACAAATAAGCCGGAAGGAGAGGAAATAGTAAAGCAGAAAGACTTCTACTTCTGTTTTTaGGAGCAGTGGGTAAAAGTG +
Preference number: 5 (lower is better)
Translates to: FQYTTNKPEGEEIVKQKDFYFCF*EQWVKV
Trigger: CACTTTTACCCACTGCTCCAAAAAACAGAAGTAGAA...GTCTTTCTGCTTTACTATTTCCTCTCCTTCCGGCTTATTTGTGGTATACTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000461923.5
ENST00000576064.5
CDS CAA 72 bp AGGTACCGGGGAGACAAGCTGTTTCCACGGAGCAGCTaGAGGCAGGTGCACAACCGGAAGCCGTGCCACAGG +
Preference number: 6 (lower is better)
Translates to: RYRGDKLFPRSS*RQVHNRKPCHR
Trigger: CCTGTGGCACGGCTTCCGGTTGTGCACCTGCCTCAAGCTGCTCCGTGGAAACAGCTTGTCTCCCCGGTACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377755.9
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
ENST00000684280.1
CDS TCA 72 bp GTCAGCCCGCGAGACCTGGATAGGAAGCTTGGAGTCTaGCATCGGGATGTAGCACAGGTACCGGGGAGACAA +
Preference number: 6 (lower is better)
Translates to: VSPRDLDRKLGV*HRDVAQVPGRQ
Trigger: TTGTCTCCCCGGTACCTGTGCTACATCCCGATGTCAGACTCCAAGCTTCCTATCCAGGTCTCGCGGGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377755.9
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
ENST00000684280.1
CDS GCA 72 bp TGGTCCAGGACACATAGCCCTCCTGCACAATATTCCTaGACCCAGCTATCACCAGACCTTCAGCTTTCTGGG +
Preference number: 6 (lower is better)
Translates to: WSRTHSPPAQYS*TQLSPDLQLSG
Trigger: CCCAGAAAGCTGAAGGTCTGGTGATAGCTGGGTGCAGGAATATTGTGCAGGAGGGCTATGTGTCCTGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000461923.5
ENST00000576064.5
ENST00000684280.1
CDS CAA 90 bp CTGATAATCCGGGCACACCATTGGGATATCCTGTTCACATTGTTCTaGGATCCTGGATTCCAGCTCTGCGTTGGTCTCCTCCAGGCTGCG +
Preference number: 6 (lower is better)
Translates to: LIIRAHHWDILFTLF*DPGFQLCVGLLQAA
Trigger: CGCAGCCTGGAGGAGACCAACGCAGAGCTGGAATCCAGGATCCAAGAACAATGTGAACAGGATATCCCAATGGTGTGCCCGGATTATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377755.9
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
ENST00000684280.1
CDS CAA 72 bp CGGGCACACCATTGGGATATCCTGTTCACATTGTTCTaGGATCCTGGATTCCAGCTCTGCGTTGGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: RAHHWDILFTLF*DPGFQLCVGLL
Trigger: GAGGAGACCAACGCAGAGCTGGAATCCAGGATCCAAGAACAATGTGAACAGGATATCCCAATGGTGTGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377755.9
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
ENST00000684280.1
CDS CAA 90 bp GTAACGCTGATAATCCGGGCACACCATTGGGATATCCTGTTCACATaGTTCTTGGATCCTGGATTCCAGCTCTGCGTTGGTCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: VTLIIRAHHWDILFT*FLDPGFQLCVGLLQ
Trigger: CTGGAGGAGACCAACGCAGAGCTGGAATCCAGGATCCAAGAACAATGTGAACAGGATATCCCAATGGTGTGCCCGGATTATCAGCGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377755.9
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
ENST00000684280.1
CDS GCA 72 bp TGGTCCAGGACACATAGCCCTCCTGCACAATATTCCTaGACCCAGCTATCACCAGACCTTCAGATGTCAAGA +
Preference number: 6 (lower is better)
Translates to: WSRTHSPPAQYS*TQLSPDLQMSR
Trigger: TCTTGACATCTGAAGGTCTGGTGATAGCTGGGTGCAGGAATATTGTGCAGGAGGGCTATGTGTCCTGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398486.2
ENST00000576967.6
CDS TCA 72 bp CAGCTATCACCAGACCTTCAGATGTCAAGACTCAGCTaGAACGTCGTTCAACTGCCTCATGTGGAGATGTGG +
Preference number: 6 (lower is better)
Translates to: QLSPDLQMSRLS*NVVQLPHVEMW
Trigger: CCACATCTCCACATGAGGCAGTTGAACGACGTTTCAGCTGAGTCTTGACATCTGAAGGTCTGGTGATAGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398486.2
ENST00000576967.6
CDS CAA 72 bp ATAATCCGGGCACACCATTGGGATATCCTGTTCACATaGTTCTTGGATCCTGGATTCCAGCTCTGCGTTGGT +
Preference number: 6 (lower is better)
Translates to: IIRAHHWDILFT*FLDPGFQLCVG
Trigger: ACCAACGCAGAGCTGGAATCCAGGATCCAAGAACAATGTGAACAGGATATCCCAATGGTGTGCCCGGATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377755.9
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
ENST00000684280.1
CDS CCA 72 bp GGTGTTGAAGTAACGCTGATAATCCGGGCACACCATTaGGATATCCTGTTCACATTGTTCTTGGATCCTGGA +
Preference number: 6 (lower is better)
Translates to: GVEVTLIIRAHH*DILFTLFLDPG
Trigger: TCCAGGATCCAAGAACAATGTGAACAGGATATCCCAATGGTGTGCCCGGATTATCAGCGTTACTTCAACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377755.9
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
ENST00000684280.1
CDS TCA 72 bp TGCATAAGATCTTTTGTTGGAGATCTTCAATGGTGTTaGAGTAACGCTGATAATCCGGGCACACCATTGGGA +
Preference number: 6 (lower is better)
Translates to: CIRSFVGDLQWC*SNADNPGTPLG
Trigger: TCCCAATGGTGTGCCCGGATTATCAGCGTTACTTCAACACCATTGAAGATCTCCAACAAAAGATCTTATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377755.9
ENST00000398486.2
ENST00000461923.5
ENST00000576064.5
ENST00000576967.6
ENST00000610983.1
ENST00000684280.1