RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KREMEN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000131650

Ensembl transcript IDs: ENST00000303746.10, ENST00000319500.10, ENST00000571007.5, ENST00000572045.5, ENST00000575769.1, ENST00000575885.5

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATCAGCCGAGCCGGTCCAATCCCGCTGCAGCGTCCTGCTCTACCTaGGATCCCGCGCGCGATCCTGTGCGTGGACCCAAAGCCTCGCTC +
Preference number: 1 (lower is better)
Translates to: HQPSRSNPAAASCST*DPARDPVRGPKASL
Trigger: GAGCGAGGCTTTGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGCTGCAGCGGGATTGGACCGGCTCGGCTGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR GCA 90 bp GGGAGCAGACATCAGCCGAGCCGGTCCAATCCCGCTGCAGCGTCCTaGTCTACCTGCGATCCCGCGCGCGATCCTGTGCGTGGACCCAAA +
Preference number: 1 (lower is better)
Translates to: GSRHQPSRSNPAAAS*STCDPARDPVRGPK
Trigger: TTTGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGCTGCAGCGGGATTGGACCGGCTCGGCTGATGTCTGCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR GCA 90 bp CTCCTAGAGAGGGAGCAGACATCAGCCGAGCCGGTCCAATCCCGCTaGAGCGTCCTGCTCTACCTGCGATCCCGCGCGCGATCCTGTGCG +
Preference number: 1 (lower is better)
Translates to: LLEREQTSAEPVQSR*SVLLYLRSRARSCA
Trigger: CGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGCTGCAGCGGGATTGGACCGGCTCGGCTGATGTCTGCTCCCTCTCTAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR GCA 90 bp TTCCTGTCCGACTTTTGGTCTCCCCAAGGCGACCAGAGGCCGAGCTaGCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCAT +
Preference number: 1 (lower is better)
Translates to: FLSDFWSPQGDQRPS*PYTGARPRQGAAQH
Trigger: ATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR GCA 90 bp CCGCTGCAGCGTCCTGCTCTACCTGCGATCCCGCGCGCGATCCTGTaGGTGGACCCAAAGCCTCGCTCCCTTAAGAACCCAGGAGTTCCT +
Preference number: 1 (lower is better)
Translates to: PLQRPALPAIPRAIL*VDPKPRSLKNPGVP
Trigger: AGGAACTCCTGGGTTCTTAAGGGAGCGAGGCTTTGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGCTGCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572045.5
3UTR CCA 90 bp TGCAGCGTCCTGCTCTACCTGCGATCCCGCGCGCGATCCTGTGCGTaGACCCAAAGCCTCGCTCCCTTAAGAACCCAGGAGTTCCTTCCT +
Preference number: 1 (lower is better)
Translates to: CSVLLYLRSRARSCA*TQSLAPLRTQEFLP
Trigger: AGGAAGGAACTCCTGGGTTCTTAAGGGAGCGAGGCTTTGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572045.5
3UTR CCA 90 bp TTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATaGAGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTC +
Preference number: 1 (lower is better)
Translates to: FKDLRNQRPPPHTGP*RGPGPSGPPRSGQV
Trigger: GACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR GCA 90 bp GCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCCCGCGCGCGATCCTGTaGGTGGACCCAAAGCCTCGC +
Preference number: 2 (lower is better)
Translates to: AAQHLRCPSRRRRAQRTLPRAIL*VDPKPR
Trigger: GCGAGGCTTTGGGTCCACGCACAGGATCGCGCGCGG...GAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR-3UTR CCA 90 bp CAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGAGGGCCTGGACCATCTaGACCCCCACGGTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: QGAAQHLRCPSRRRRAQRRAWTI*TPTVRP
Trigger: TGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCT...CCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR GCA 90 bp CCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCCCGCGCGCGATCCTGTaGGTGGACCCAAAGCCTCGC +
Preference number: 2 (lower is better)
Translates to: PSCPYTGARPRQGAAQHLPRAIL*VDPKPR
Trigger: GCGAGGCTTTGGGTCCACGCACAGGATCGCGCGCGG...GAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR-3UTR CCA 90 bp CAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGAGGGCCTGGACCATCTaGACCCCCACGGTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: QHSISGVHLAGGGPSGPSRAWTI*TPTVRP
Trigger: TGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCT...CGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR CCA 90 bp GCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGCGCGATCCTGTGCGTaGACCCAAAGCCTCGCTCCC +
Preference number: 2 (lower is better)
Translates to: AAQHLRCPSRRRRAQRTLARSCA*TQSLAP
Trigger: GGGAGCGAGGCTTTGGGTCCACGCACAGGATCGCGC...GAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR-3UTR TCA 90 bp CAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGCCTGTGACCTCTCACTaGGGACGGCAGTCCAGGACC +
Preference number: 2 (lower is better)
Translates to: QHSISGVHLAGGGPSGPSPVTSH*GRQSRT
Trigger: GGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGG...CGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR TCA 90 bp CCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGCCTGTGACCTCTCACTaGGGACGGCAGTCCAGGACC +
Preference number: 2 (lower is better)
Translates to: PQGDQRPSCPYTGARPRQPVTSH*GRQSRT
Trigger: GGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGG...CTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR CCA 90 bp GTCTCCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGAGGGCCTGGACCATCTaGACCCCCACGGTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: VSPRRPEAELPLHRRKAERAWTI*TPTVRP
Trigger: TGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCT...CTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGGAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR TCA 90 bp GTCTCCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGCCTGTGACCTCTCACTaGGGACGGCAGTCCAGGACC +
Preference number: 2 (lower is better)
Translates to: VSPRRPEAELPLHRRKAEPVTSH*GRQSRT
Trigger: GGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGG...CTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR CCA 90 bp CACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGTCCATGGAGAGGGCCTaGACCATCTGGACCCCCACG +
Preference number: 2 (lower is better)
Translates to: HRRKAEAGRSTASQVSISSMERA*TIWTPT
Trigger: CGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATGGA...CGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR CCA 90 bp GCTCCTAGAGAGGGAGCAGACATCAGCCGAGCCGGTCCAATCCCGCTGCAGCGTGCGCGATCCTGTGCGTaGACCCAAAGCCTCGCTCCC +
Preference number: 2 (lower is better)
Translates to: APREGADISRAGPIPLQRARSCA*TQSLAP
Trigger: GGGAGCGAGGCTTTGGGTCCACGCACAGGATCGCGC...ACGCTGCAGCGGGATTGGACCGGCTCGGCTGATGTCTGCTCCCTCTCTAGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR-3UTR GCA 90 bp AAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGCGTCCTGCTCTACCTaGGATCCCGCGCGCGATCCT +
Preference number: 2 (lower is better)
Translates to: KTSETRDHPHIQVHGEGLASCST*DPARDP
Trigger: AGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGC...CAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR-3UTR GCA 90 bp GTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGCCCGCTGCAGCGTCCTaGTCTACCTGCGATCCCGCG +
Preference number: 2 (lower is better)
Translates to: VQRPPKPETTPTYRSMERPAAAS*STCDPA
Trigger: CGCGGGATCGCAGGTAGAGCAGGACGCTGCAGCGGG...CCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR-3UTR CCA 90 bp CATGGAGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATATTCCTGTCCGACTTTTaGTCTCCCCAAGGCGACCAG +
Preference number: 2 (lower is better)
Translates to: HGEGLDHLDPHGQAKSQIFLSDF*SPQGDQ
Trigger: CTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAA...TATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR CCA 90 bp CTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTGCAGGGAGCTCTGGCTaGAGGCACTCAGAGGCCGGT +
Preference number: 2 (lower is better)
Translates to: LDPHGQAKSQIIAPDVSCAGSSG*RHSEAG
Trigger: ACCGGCCTCTGAGTGCCTCCAGCCAGAGCTCCCTGC...ACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR-3UTR TCA 90 bp AGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGTCAGAGAGCGGAGATaGGCGAGCGCAGGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: RGVQRPPKPETTPTYRSMVRERR*ASAGSS
Trigger: AGAGCTCCCTGCGCTCGCTCATCTCCGCTCTCTGAC...CATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR GCA 90 bp AATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGACCAGAGGGCGTCCTGCTCTACCTaGGATCCCGCGCGCGATCCT +
Preference number: 2 (lower is better)
Translates to: NSTRCFLSDFWSPQGDQRASCST*DPARDP
Trigger: AGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGC...CCTCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR-3UTR GCA 90 bp AGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGACCGGTCCAATCCCGCTaGAGCGTCCTGCTCTACCTG +
Preference number: 2 (lower is better)
Translates to: RGSKTSETRDHPHIQVHGPVQSR*SVLLYL
Trigger: CAGGTAGAGCAGGACGCTGCAGCGGGATTGGACCGG...TCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR-3UTR CCA 90 bp GAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCATTCCTGTCCGACTTTTaGTCTCCCCAAGGCGACCAG +
Preference number: 2 (lower is better)
Translates to: EGLDHLDPHGQAKSQIIAFLSDF*SPQGDQ
Trigger: CTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAA...TGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR CCA 90 bp AGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCCCACATACAGGTCCATaGAGAGGGCCTGGACCATCT +
Preference number: 2 (lower is better)
Translates to: RGPGPSGPPRSGQVPDNSPHTGP*RGPGPS
Trigger: AGATGGTCCAGGCCCTCTCCATGGACCTGTATGTGG...GCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR TCA 90 bp CACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGTCAGAGAGCGGAGATaGGCGAGCGCAGGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: HGQAKSQIIAPDVSCPTFVRERR*ASAGSS
Trigger: AGAGCTCCCTGCGCTCGCTCATCTCCGCTCTCTGAC...AAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR CCA 90 bp GTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCAGCTCTGTTCCCTTCTaGGGCTCCAGCTCCCCACCA +
Preference number: 2 (lower is better)
Translates to: VPDNSTRCFLSDFWSPQGSSVPF*GSSSPP
Trigger: TGGTGGGGAGCTGGAGCCCCAGAAGGGAACAGAGCT...GCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572045.5
3UTR GCA 72 bp CATCAGCCGAGCCGGTCCAATCCCGCTGCAGCGTCCTaGTCTACCTGCGATCCCGCGCGCGATCCTGTGCGT +
Preference number: 3 (lower is better)
Translates to: HQPSRSNPAAAS*STCDPARDPVR
Trigger: ACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGCTGCAGCGGGATTGGACCGGCTCGGCTGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR GCA 72 bp AGGGAGCAGACATCAGCCGAGCCGGTCCAATCCCGCTaGAGCGTCCTGCTCTACCTGCGATCCCGCGCGCGA +
Preference number: 3 (lower is better)
Translates to: REQTSAEPVQSR*SVLLYLRSRAR
Trigger: TCGCGCGCGGGATCGCAGGTAGAGCAGGACGCTGCAGCGGGATTGGACCGGCTCGGCTGATGTCTGCTCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR GCA 72 bp AGCCGGTCCAATCCCGCTGCAGCGTCCTGCTCTACCTaGGATCCCGCGCGCGATCCTGTGCGTGGACCCAAA +
Preference number: 3 (lower is better)
Translates to: SRSNPAAASCST*DPARDPVRGPK
Trigger: TTTGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGCTGCAGCGGGATTGGACCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
3UTR CCA 72 bp GAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTaGACCATCTGGACCCCCACGGTCAGGCCAAGTCCC +
Preference number: 3 (lower is better)
Translates to: ETTPTYRSMERA*TIWTPTVRPSP
Trigger: GGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR CAA 90 bp CGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGTTTCCTGTCCGACTTTaGGTCTCCCCAAGGCGACCA +
Preference number: 3 (lower is better)
Translates to: RKAEAGRSTASQVSISPAFPVRL*VSPRRP
Trigger: TGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAA...CGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR GCA 72 bp CGTCCTGCTCTACCTGCGATCCCGCGCGCGATCCTGTaGGTGGACCCAAAGCCTCGCTCCCTTAAGAACCCA +
Preference number: 3 (lower is better)
Translates to: RPALPAIPRAIL*VDPKPRSLKNP
Trigger: TGGGTTCTTAAGGGAGCGAGGCTTTGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572045.5
3UTR CCA 72 bp CTGCTCTACCTGCGATCCCGCGCGCGATCCTGTGCGTaGACCCAAAGCCTCGCTCCCTTAAGAACCCAGGAG +
Preference number: 3 (lower is better)
Translates to: LLYLRSRARSCA*TQSLAPLRTQE
Trigger: CTCCTGGGTTCTTAAGGGAGCGAGGCTTTGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572045.5
3UTR CCA 72 bp CCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTaGTCTCCCCAAGGCGACCAGAGGCCGAGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: PDNSTRCFLSDF*SPQGDQRPSCP
Trigger: GGGGCAGCTCGGCCTCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
3UTR-3UTR CAA 90 bp GACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTTTCCTGTCCGACTTTaGGTCTCCCCAAGGCGACCA +
Preference number: 3 (lower is better)
Translates to: DHLDPHGQAKSQIIAPDVFPVRL*VSPRRP
Trigger: TGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAA...AACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp ACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGGGGCGGCCCAGGGCCCAGCTaGAGTTCCGGTCCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: TASQVSISPAAGPADPRGGPGPS*SSGPAR
Trigger: ACGGGCCGGACCGGAACTGCAGCTGGGCCCTGGGCC...GCCCCGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCGGCCCAGGGCCCAGCTaGAGTTCCGGTCCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: AEAGRSTASQVSISPAAGGPGPS*SSGPAR
Trigger: ACGGGCCGGACCGGAACTGCAGCTGGGCCCTGGGCC...GCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGGGAGGCGCGGAGCAGGCTaGCCGAAGCCGCGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: AQHLRCPSRRRRAQRTLGRRGAG*PKPRRA
Trigger: TGCGCGACGCGGCTTCGGGCAGCCTGCTCCGCGCCT...CCCGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGTGAGCGCGAAGCCTTaGGCGTGGCCGCGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: GDQRPSCPYTGARPRQGAVSAKP*AWPRAS
Trigger: CGACGCGCGCGGCCACGCGCAAGGCTTCGCGCTCAC...TGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCGTGAGCGCGAAGCCTTaGGCGTGGCCGCGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: RPEAELPLHRRKAEAGRSVSAKP*AWPRAS
Trigger: CGACGCGCGCGGCCACGCGCAAGGCTTCGCGCTCAC...GCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGGCGAAGCCTTGCGCGTaGCCGCGCGCGTCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: QGAAQHLRCPSRRRRAQRAKPCA*PRASLR
Trigger: CCGAAGCGACGCGCGCGGCCACGCGCAAGGCTTCGC...CCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGGCCCTCGGGGGCCTCTaGGTCCTCAGCGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: QGAAQHLRCPSRRRRAQRALGGL*VLSGVL
Trigger: CAGGACGCCGCTGAGGACCCAGAGGCCCCCGAGGGC...CCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCGCAGCCCGCGGTAGGTaGGCGCGAAGCCTTGCGCGT +
Preference number: 4 (lower is better)
Translates to: RPEAELPLHRRKAEAGRSAARGR*ARSLAR
Trigger: ACGCGCAAGGCTTCGCGCTCACCTACCGCGGGCTGC...GCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CCCAGCGCCGGGGGCCCTTTTCCCGGAGCCAGCAGACAGCTCCTAGAGAGGGAGGAGGGGGCGGCTCCCTaGCTCACTCCCGTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: PSAGGPFPGASRQLLEREEGAAP*LTPVPR
Trigger: GCGCGGGACGGGAGTGAGTCAGGGAGCCGCCCCCTC...CTCCCTCTCTAGGAGCTGTCTGCTGGCTCCGGGAAAAGGGCCCCCGGCGCTGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572045.5
CDS-3UTR GCA 90 bp AGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGGCCCAGGGCCCAGCTaGAGTTCCGGTCCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: RPRQGAAQHLRCPSRRRRGPGPS*SSGPAR
Trigger: ACGGGCCGGACCGGAACTGCAGCTGGGCCCTGGGCC...CCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp AGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGGGCCCAGGGCCCAGCTaGAGTTCCGGTCCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: RQGAAQHLRCPSRRRRAQGPGPS*SSGPAR
Trigger: ACGGGCCGGACCGGAACTGCAGCTGGGCCCTGGGCC...CTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGTGAGCGCGAAGCCTTaGGCGTGGCCGCGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: AAQHLRCPSRRRRAQRTLVSAKP*AWPRAS
Trigger: CGACGCGCGCGGCCACGCGCAAGGCTTCGCGCTCAC...GAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp ACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGGGGCCCCCTCGTCCGACTCTaGGCCGCGCTTTCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: TASQVSISPAAGPADPRGPLVRL*AALSVW
Trigger: CCAGACGGAAAGCGCGGCTCAGAGTCGGACGAGGGG...GCCCCGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR TCA 90 bp CAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGGGCACACCTGGACCGTaGGCTTCGTGGAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: QGAAQHLRCPSRRRRAQRGTPGP*ASWRCR
Trigger: GCGGCACCTCCACGAAGCTCACGGTCCAGGTGTGCC...CCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp GCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCCGAAGAGGCGGAAGGTaGGCTCCAGCGCGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: AAQHLRCPSRRRRAQRTLRRGGR*APARRL
Trigger: CAGGCGCCGCGCTGGAGCTCACCTTCCGCCTCTTCG...GAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp GAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCACGAAGAGGCGGAAGGTaGGCTCCAGCGCGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: EAGRSTASQVSISPAAGPRRGGR*APARRL
Trigger: CAGGCGCCGCGCTGGAGCTCACCTTCCGCCTCTTCG...TGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp GGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCACGTCGCTTCGGAAGGTaGGCAGCAGCGCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GDQRPSCPYTGARPRQGARRFGR*AAARQC
Trigger: GCACTGCCGCGCTGCTGCTCACCTTCCGAAGCGACG...TGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp GCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCCGTCGCTTCGGAAGGTaGGCAGCAGCGCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: AQHSISGVHLAGGGPSGPRRFGR*AAARQC
Trigger: GCACTGCCGCGCTGCTGCTCACCTTCCGAAGCGACG...GGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp ACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGGGGCCGTCGCTTCGGAAGGTaGGCAGCAGCGCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: TASQVSISPAAGPADPRGRRFGR*AAARQC
Trigger: GCACTGCCGCGCTGCTGCTCACCTTCCGAAGCGACG...GCCCCGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGCAGCCCGCGGTAGGTaGGCGCGAAGCCTTGCGCGT +
Preference number: 4 (lower is better)
Translates to: PQGDQRPSCPYTGARPRQAARGR*ARSLAR
Trigger: ACGCGCAAGGCTTCGCGCTCACCTACCGCGGGCTGC...CTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp AGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGGCACACGGCTGCGGTaGGGATGGGCGCGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: RRKAEAGRSTASQVSISPGTRLR*GWARGG
Trigger: GCCCCCTCGCGCCCATCCTCACCGCAGCCGTGTGCC...CGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572045.5
CDS-3UTR GCA 90 bp GAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGAGGCCCCACGCGGCTaGAGCAGCGGGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: EAGRSTASQVSISPAAGPEAPRG*SSGRKR
Trigger: CCTCTTCCTCCCGCTGCTGCAGCCGCGTGGGGCCTC...TGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGGAGGCCCCACGCGGCTaGAGCAGCGGGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QHSISGVHLAGGGPSGPSEAPRG*SSGRKR
Trigger: CCTCTTCCTCCCGCTGCTGCAGCCGCGTGGGGCCTC...CGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp AGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATGGCCCAGGGCCCAGCTaGAGTTCCGGTCCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: RPSCPYTGARPRQGAAQHGPGPS*SSGPAR
Trigger: ACGGGCCGGACCGGAACTGCAGCTGGGCCCTGGGCC...ATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp AGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCCGAGAAGACCCGGGCTaGGGGCACACGGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: RGRAAPTQAQGRGRAQHSREDPG*GHTAAV
Trigger: CACCGCAGCCGTGTGCCCGCAGCCCGGGTCTTCTCG...GCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572045.5
CDS-3UTR CCA 90 bp GAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCATCTGGTCACAGTCGGTaGCGGGGGCCAGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: EAGRSTASQVSISPAAGPSGHSR*RGPGVP
Trigger: GGGGACGCCTGGCCCCCGCCACCGACTGTGACCAGA...TGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp AGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCTCTGGTCACAGTCGGTaGCGGGGGCCAGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: RGRAAPTQAQGRGRAQHSSGHSR*RGPGVP
Trigger: GGGGACGCCTGGCCCCCGCCACCGACTGTGACCAGA...GCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp CCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCGCCCTCGGGGGCCTCTaGGTCCTCAGCGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSCPYTGARPRQGAAQHLALGGL*VLSGVL
Trigger: CAGGACGCCGCTGAGGACCCAGAGGCCCCCGAGGGC...GAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCGGCTGCAGCTCACGTTaGCCCCGTCGAGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PSCPYTGARPRQGAAQHLGCSSR*PRRGAP
Trigger: CGGCGCCCCTCGACGGGGCCAACGTGAGCTGCAGCC...GAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp GAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCAGGCACACCTGGACCGTaGGCTTCGTGGAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: EAELPLHRRKAEAGRSTAGTPGP*ASWRCR
Trigger: GCGGCACCTCCACGAAGCTCACGGTCCAGGTGTGCC...TGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCAGTCCGGGGAGTAGATaGCGCCCTGAGGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RPEAELPLHRRKAEAGRSSPGSR*RPEALS
Trigger: GGACAGCGCCTCAGGGCGTCATCTACTCCCCGGACT...GCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGCGTCGCTTCGGAAGGTaGGCAGCAGCGCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PQGDQRPSCPYTGARPRQRRFGR*AAARQC
Trigger: GCACTGCCGCGCTGCTGCTCACCTTCCGAAGCGACG...CTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGTCTCCTGGGGGTCTTTaGCTCCCAGGGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: AGRSTASQVSISPAAGPASPGGL*LPGPLP
Trigger: GGGCAGAGGCCCTGGGAGGCAAAGACCCCCAGGAGA...CGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR GCA 90 bp GCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGGGGGTCGCTGGCGCTaGTGTAGCTGTGTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: AGRSTASQVSISPAAGPAGGRWR*CSCVAA
Trigger: CGCAGCAACACAGCTACAGCAGCGCCAGCGACCCCC...CGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp AGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGAGGCGCGGAGCAGGCTaGCCGAAGCCGCGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: SCPYTGARPRQGAAQHLRRRGAG*PKPRRA
Trigger: TGCGCGACGCGGCTTCGGGCAGCCTGCTCCGCGCCT...CCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCGACCAGAGGCCGAGCTaGCCCTACACAGGCGCAAGG +
Preference number: 4 (lower is better)
Translates to: AQHSISGVHLAGGGPSGPDQRPS*PYTGAR
Trigger: CCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTC...GGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCAGAGGCCGAGCTaGCCCTACACAGGCGCAAGG +
Preference number: 4 (lower is better)
Translates to: AGRSTASQVSISPAAGPADQRPS*PYTGAR
Trigger: CCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTC...CGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCACCGCGCGCGATCCTGTaGGTGGACCCAAAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: EAGRSTASQVSISPAAGPPRAIL*VDPKPR
Trigger: GCGAGGCTTTGGGTCCACGCACAGGATCGCGCGCGG...TGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp CGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGCTGCAGCTCACGTTaGCCCCGTCGAGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: RAAPTQAQGRGRAQHSISGCSSR*PRRGAP
Trigger: CGGCGCCCCTCGACGGGGCCAACGTGAGCTGCAGCC...TGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCTGCAGCTCACGTTaGCCCCGTCGAGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: QAQGRGRAQHSISGVHLAGCSSR*PRRGAP
Trigger: CGGCGCCCCTCGACGGGGCCAACGTGAGCTGCAGCC...GGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp AGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCGGGGGCGTTGTCCTCTaGCAGTCTCCCCTCGTCCGA +
Preference number: 4 (lower is better)
Translates to: RGRAAPTQAQGRGRAQHSGGVVL*QSPLVR
Trigger: TCGGACGAGGGGAGACTGTCAGAGGACAACGCCCCC...GCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR TCA 90 bp CTCCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCGGGGGCGTTGTCCTCTaGCAGTCTCCCCTCGTCCGA +
Preference number: 4 (lower is better)
Translates to: LPKATRGRAAPTQAQGRGGGVVL*QSPLVR
Trigger: TCGGACGAGGGGAGACTGTCAGAGGACAACGCCCCC...GCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR TCA 90 bp CCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGAGTCCGGGGAGTAGATaGCGCCCTGAGGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PQGDQRPSCPYTGARPRQSPGSR*RPEALS
Trigger: GGACAGCGCCTCAGGGCGTCATCTACTCCCCGGACT...CTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp AGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGCGAAGAGGCGGAAGGTaGGCTCCAGCGCGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: SCPYTGARPRQGAAQHLRRRGGR*APARRL
Trigger: CAGGCGCCGCGCTGGAGCTCACCTTCCGCCTCTTCG...CCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp GAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGCGAAGAGGCGGAAGGTaGGCTCCAGCGCGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: ELPLHRRKAEAGRSTASQRRGGR*APARRL
Trigger: CAGGCGCCGCGCTGGAGCTCACCTTCCGCCTCTTCG...CTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp GCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGGGGTCAGAGAGCGGAGATaGGCGAGCGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: AQHLRCPSRRRRAQRTLGVRERR*ASAGSS
Trigger: AGAGCTCCCTGCGCTCGCTCATCTCCGCTCTCTGAC...CCCGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp GGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCGTCAGAGAGCGGAGATaGGCGAGCGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GAAQHLRCPSRRRRAQRTVRERR*ASAGSS
Trigger: AGAGCTCCCTGCGCTCGCTCATCTCCGCTCTCTGAC...GGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp AGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGTCTCCTGGGGGTCTTTaGCTCCCAGGGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RQGAAQHLRCPSRRRRAQSPGGL*LPGPLP
Trigger: GGGCAGAGGCCCTGGGAGGCAAAGACCCCCAGGAGA...CTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR GCA 90 bp AAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGGGGGGTCGCTGGCGCTaGTGTAGCTGTGTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: KATRGRAAPTQAQGRGRAGGRWR*CSCVAA
Trigger: CGCAGCAACACAGCTACAGCAGCGCCAGCGACCCCC...CGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTT
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp TCCTGCTCTACCTGCGATCCCGCGCGCGATCCTGTGCGTGGACCCAAAGCCTCGAGGCGCGGAGCAGGCTaGCCGAAGCCGCGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: SCSTCDPARDPVRGPKASRRGAG*PKPRRA
Trigger: TGCGCGACGCGGCTTCGGGCAGCCTGCTCCGCGCCT...CGAGGCTTTGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR GCA 90 bp CACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGGTGAGCGCGAAGCCTTaGGCGTGGCCGCGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: HRRKAEAGRSTASQVSISVSAKP*AWPRAS
Trigger: CGACGCGCGCGGCCACGCGCAAGGCTTCGCGCTCAC...CGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGGGGGCATTCGGACAGGCCTaGACTGTGCAGGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: HSISGVHLAGGGPSGPSGAFGQA*TVQAPS
Trigger: GCTGGGAGCCTGCACAGTCCAGGCCTGTCCGAATGC...CCCCGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCGGCCGTGGGGGTCGCTaGCGCTGCTGTAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GRAAPTQAQGRGRAQHSIGRGGR*RCCSCV
Trigger: AACACAGCTACAGCAGCGCCAGCGACCCCCACGGCC...GATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCAGGCCGTGGGGGTCGCTaGCGCTGCTGTAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: EAELPLHRRKAEAGRSTAGRGGR*RCCSCV
Trigger: AACACAGCTACAGCAGCGCCAGCGACCCCCACGGCC...TGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGTCCACGCCCGCCAGCTaGTACCCCTTCATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QHSISGVHLAGGGPSGPSSTPAS*YPFMRQ
Trigger: CTGCCGCATGAAGGGGTACCAGCTGGCGGGCGTGGA...CGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp GAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGTCTGGTCACAGTCGGTaGCGGGGGCCAGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: ELPLHRRKAEAGRSTASQSGHSR*RGPGVP
Trigger: GGGGACGCCTGGCCCCCGCCACCGACTGTGACCAGA...CTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp TGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTGGCTGCAGCTCACGTTaGCCCCGTCGAGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: CPYTGARPRQGAAQHLRCGCSSR*PRRGAP
Trigger: CGGCGCCCCTCGACGGGGCCAACGTGAGCTGCAGCC...ACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCAGCAGGGAGCTCTGGCTaGAGGCACTCAGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: EAELPLHRRKAEAGRSTAAGSSG*RHSEAG
Trigger: ACCGGCCTCTGAGTGCCTCCAGCCAGAGCTCCCTGC...TGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGCAGGGAGCTCTGGCTaGAGGCACTCAGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: PQGDQRPSCPYTGARPRQAGSSG*RHSEAG
Trigger: ACCGGCCTCTGAGTGCCTCCAGCCAGAGCTCCCTGC...CTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCTCCATGGAGAGGGCCTaGACCATCTGGACCCCCACG +
Preference number: 4 (lower is better)
Translates to: RPEAELPLHRRKAEAGRSSMERA*TIWTPT
Trigger: CGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATGGA...GCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGTCCATGGAGAGGGCCTaGACCATCTGGACCCCCACG +
Preference number: 4 (lower is better)
Translates to: AGRSTASQVSISPAAGPASMERA*TIWTPT
Trigger: CGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATGGA...CGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGGCGCGATCCTGTGCGTaGACCCAAAGCCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: KATRGRAAPTQAQGRGRAARSCA*TQSLAP
Trigger: GGGAGCGAGGCTTTGGGTCCACGCACAGGATCGCGC...CGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp AGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCGCGATCCTGTGCGTaGACCCAAAGCCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: RPRQGAAQHLRCPSRRRRARSCA*TQSLAP
Trigger: GGGAGCGAGGCTTTGGGTCCACGCACAGGATCGCGC...CCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR TCA 90 bp CAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCCCCCTCGTCCGACTCTaGGCCGCGCTTTCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: QAQGRGRAQHSISGVHLAPLVRL*AALSVW
Trigger: CCAGACGGAAAGCGCGGCTCAGAGTCGGACGAGGGG...GGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR TCA 90 bp TCTCCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGGGCTGGGGGTGCCCCTaGGTCCACAAAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: SPQGDQRPSCPYTGARPRGWGCP*VHKASQ
Trigger: CTGGGATGCTTTGTGGACTCAGGGGCACCCCCAGCC...CCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCCGTCGCTTCGGAAGGTaGGCAGCAGCGCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: QAQGRGRAQHSISGVHLARRFGR*AAARQC
Trigger: GCACTGCCGCGCTGCTGCTCACCTTCCGAAGCGACG...GGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp AGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGGTCAGAGAGCGGAGATaGGCGAGCGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RQGAAQHLRCPSRRRRAQVRERR*ASAGSS
Trigger: AGAGCTCCCTGCGCTCGCTCATCTCCGCTCTCTGAC...CTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp TCTCCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGTCTCCTGGGGGTCTTTaGCTCCCAGGGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SPQGDQRPSCPYTGARPRSPGGL*LPGPLP
Trigger: GGGCAGAGGCCCTGGGAGGCAAAGACCCCCAGGAGA...CCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR GCA 90 bp TCTCCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGGACCAGAGGCCGAGCTaGCCCTACACAGGCGCAAGG +
Preference number: 4 (lower is better)
Translates to: SPQGDQRPSCPYTGARPRDQRPS*PYTGAR
Trigger: CCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTC...CCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp ACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACGCATTCGGACAGGCCTaGACTGTGCAGGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: TRGRAAPTQAQGRGRAQHAFGQA*TVQAPS
Trigger: GCTGGGAGCCTGCACAGTCCAGGCCTGTCCGAATGC...GTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp ACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGGGGCCTGTGTTGCTGCGTCTaGTCCCAGAAGAGGCACGGG +
Preference number: 4 (lower is better)
Translates to: TASQVSISPAAGPADPRGLCCCV*SQKRHG
Trigger: CCCGTGCCTCTTCTGGGACCAGACGCAGCAACACAG...GCCCCGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGGGTGGCCGAAACAGATCTaGTCACAGTCGGTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: AQHLRCPSRRRRAQRTLGWPKQI*SQSVAG
Trigger: CCCCGCCACCGACTGTGACCAGATCTGTTTCGGCCA...CCCGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp CCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGCTGTCCAGTTCCCCTaGCAGGAGCCCACCGACACT +
Preference number: 4 (lower is better)
Translates to: PQGDQRPSCPYTGARPRQAVQFP*QEPTDT
Trigger: AGTGTCGGTGGGCTCCTGCCAGGGGAACTGGACAGC...CTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCAGCTGTCCAGTTCCCCTaGCAGGAGCCCACCGACACT +
Preference number: 4 (lower is better)
Translates to: DQRPSCPYTGARPRQGAAAVQFP*QEPTDT
Trigger: AGTGTCGGTGGGCTCCTGCCAGGGGAACTGGACAGC...TGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATGGCTGCAGCTCACGTTaGCCCCGTCGAGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PTQAQGRGRAQHSISGVHGCSSR*PRRGAP
Trigger: CGGCGCCCCTCGACGGGGCCAACGTGAGCTGCAGCC...ATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCGCAGGGAGCTCTGGCTaGAGGCACTCAGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: PSCPYTGARPRQGAAQHLAGSSG*RHSEAG
Trigger: ACCGGCCTCTGAGTGCCTCCAGCCAGAGCTCCCTGC...GAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATAGGGCCTGGACCATCTaGACCCCCACGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RPSCPYTGARPRQGAAQHRAWTI*TPTVRP
Trigger: TGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCT...ATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp ACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACTCCATGGAGAGGGCCTaGACCATCTGGACCCCCACG +
Preference number: 4 (lower is better)
Translates to: TRGRAAPTQAQGRGRAQHSMERA*TIWTPT
Trigger: CGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATGGA...GTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCAGCTCTGTTCCCTTCTaGGGCTCCAGCTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: RPEAELPLHRRKAEAGRSSSVPF*GSSSPP
Trigger: TGGTGGGGAGCTGGAGCCCCAGAAGGGAACAGAGCT...GCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR TCA 90 bp GCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCGGGGGCGTTGTCCTCTaGCAGTCTCCCCTCGTCCGA +
Preference number: 4 (lower is better)
Translates to: APTQAQGRGRAQHSISGVGGVVL*QSPLVR
Trigger: TCGGACGAGGGGAGACTGTCAGAGGACAACGCCCCC...GACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR TCA 90 bp AGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGGGGGCGTTGTCCTCTaGCAGTCTCCCCTCGTCCGA +
Preference number: 4 (lower is better)
Translates to: RRKAEAGRSTASQVSISPGGVVL*QSPLVR
Trigger: TCGGACGAGGGGAGACTGTCAGAGGACAACGCCCCC...CGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR TCA 90 bp AGAGAGGGAGCAGACATCAGCCGAGCCGGTCCAATCCCGCTGCAGCGTCCTGCTGCAGCCCGCGGTAGGTaGGCGCGAAGCCTTGCGCGT +
Preference number: 4 (lower is better)
Translates to: REGADISRAGPIPLQRPAAARGR*ARSLAR
Trigger: ACGCGCAAGGCTTCGCGCTCACCTACCGCGGGCTGC...AGCAGGACGCTGCAGCGGGATTGGACCGGCTCGGCTGATGTCTGCTCCCTCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR GCA 90 bp CGGGGGCCCTTTTCCCGGAGCCAGCAGACAGCTCCTAGAGAGGGAGCAGACATCGAGGCCCCACGCGGCTaGAGCAGCGGGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RGPFSRSQQTAPREGADIEAPRG*SSGRKR
Trigger: CCTCTTCCTCCCGCTGCTGCAGCCGCGTGGGGCCTC...GATGTCTGCTCCCTCTCTAGGAGCTGTCTGCTGGCTCCGGGAAAAGGGCCCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR GCA 90 bp CAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGGGGTCGCTGGCGCTaGTGTAGCTGTGTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: QAQGRGRAQHSISGVHLAGGRWR*CSCVAA
Trigger: CGCAGCAACACAGCTACAGCAGCGCCAGCGACCCCC...GGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp AGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTTACGGCAGAAGTTGTaGGCGCCCAGCCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: SCPYTGARPRQGAAQHLRLRQKL*APSPQR
Trigger: CCGCTGGGGGCTGGGCGCGCACAACTTCTGCCGTAA...CCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGGCGCGGAGCAGGCTaGCCGAAGCCGCGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: GPGPSGPPRSGQVPDNSTRRGAG*PKPRRA
Trigger: TGCGCGACGCGGCTTCGGGCAGCCTGCTCCGCGCCT...GGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp TTGCTGACCTGTGACCTCTCACTGAGGACGGCAGTCCAGGACCACCCCCAGAGGAGGCGCGGAGCAGGCTaGCCGAAGCCGCGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: LLTCDLSLRTAVQDHPQRRRGAG*PKPRRA
Trigger: TGCGCGACGCGGCTTCGGGCAGCCTGCTCCGCGCCT...CCTCTGGGGGTGGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGGTCAGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCCGCTGCAGCGTCCTaGTCTACCTGCGATCCCGCG +
Preference number: 4 (lower is better)
Translates to: HRRKAEAGRSTASQVSISPAAAS*STCDPA
Trigger: CGCGGGATCGCAGGTAGAGCAGGACGCTGCAGCGGG...CGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp CGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGCCGTGGGGGTCGCTaGCGCTGCTGTAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RAAPTQAQGRGRAQHSISGRGGR*RCCSCV
Trigger: AACACAGCTACAGCAGCGCCAGCGACCCCCACGGCC...TGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGGGCCGTGGGGGTCGCTaGCGCTGCTGTAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SCPYTGARPRQGAAQHLRGRGGR*RCCSCV
Trigger: AACACAGCTACAGCAGCGCCAGCGACCCCCACGGCC...CCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGGCATCCCAGGTAGCCTaGCATGTGACAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: QGAAQHLRCPSRRRRAQRASQVA*HVTGGD
Trigger: ATCCCCTCCTGTCACATGCCAGGCTACCTGGGATGC...CCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCAAGCGTAGGCACACCTaGACCGTGAGCTTCGTGGAG +
Preference number: 4 (lower is better)
Translates to: GAAQHLRCPSRRRRAQRTKRRHT*TVSFVE
Trigger: CTCCACGAAGCTCACGGTCCAGGTGTGCCTACGCTT...GGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTCCACGCCCGCCAGCTaGTACCCCTTCATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SCPYTGARPRQGAAQHLRSTPAS*YPFMRQ
Trigger: CTGCCGCATGAAGGGGTACCAGCTGGCGGGCGTGGA...CCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp GCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCTGGCCGAAACAGATCTaGTCACAGTCGGTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: AAQHLRCPSRRRRAQRTLWPKQI*SQSVAG
Trigger: CCCCGCCACCGACTGTGACCAGATCTGTTTCGGCCA...GAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp ACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACTGGCCGAAACAGATCTaGTCACAGTCGGTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TRGRAAPTQAQGRGRAQHWPKQI*SQSVAG
Trigger: CCCCGCCACCGACTGTGACCAGATCTGTTTCGGCCA...GTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp GGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCGCCCTCGGGGGCCTCTaGGTCCTCAGCGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: GPGPSGPPRSGQVPDNSTALGGL*VLSGVL
Trigger: CAGGACGCCGCTGAGGACCCAGAGGCCCCCGAGGGC...GGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCACCCCTCGGGGCTGTTaGTACCACACAGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RGRAAPTQAQGRGRAQHSTPRGC*YHTAQL
Trigger: AAGCTGGGCTGTGTGGTACCAACAGCCCCGAGGGGT...GCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GTCTCCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGTCCATGGAGAGGGCCTaGACCATCTGGACCCCCACG +
Preference number: 4 (lower is better)
Translates to: VSPRRPEAELPLHRRKAESMERA*TIWTPT
Trigger: CGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATGGA...CTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGGAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp AGAGGGAGCAGACATCAGCCGAGCCGGTCCAATCCCGCTGCAGCGTCCTGCTCTCCCCTCGTCCGACTCTaGGCCGCGCTTTCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: RGSRHQPSRSNPAAASCSPLVRL*AALSVW
Trigger: CCAGACGGAAAGCGCGGCTCAGAGTCGGACGAGGGG...AGAGCAGGACGCTGCAGCGGGATTGGACCGGCTCGGCTGATGTCTGCTCCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572045.5
CDS-3UTR TCA 90 bp GACATCAGCCGAGCCGGTCCAATCCCGCTGCAGCGTCCTGCTCTACCTGCGATCCGTCGCTTCGGAAGGTaGGCAGCAGCGCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: DISRAGPIPLQRPALPAIRRFGR*AAARQC
Trigger: GCACTGCCGCGCTGCTGCTCACCTTCCGAAGCGACG...GATCGCAGGTAGAGCAGGACGCTGCAGCGGGATTGGACCGGCTCGGCTGATGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR TCA 90 bp GAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTCAGAGAGCGGAGATaGGCGAGCGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ELPLHRRKAEAGRSTASQVRERR*ASAGSS
Trigger: AGAGCTCCCTGCGCTCGCTCATCTCCGCTCTCTGAC...CTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CTGCAGCGTCCTGCTCTACCTGCGATCCCGCGCGCGATCCTGTGCGTGGACCCACCTGTGACCTCTCACTaGGGACGGCAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: LQRPALPAIPRAILCVDPPVTSH*GRQSRT
Trigger: GGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGG...TGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR TCA 90 bp GCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGTTTTTGCTGACCTGTaGCCTCTCACTGAGGACGGC +
Preference number: 4 (lower is better)
Translates to: AGRSTASQVSISPAAGPAVFADL*PLTEDG
Trigger: GCCGTCCTCAGTGAGAGGTCACAGGTCAGCAAAAAC...CGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCAGCTGGTACCCCTTCATaGGGCAGAAGCGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: EAELPLHRRKAEAGRSTAAGTPS*GRSVGT
Trigger: TGTGCCTACGCTTCTGCCGCATGAAGGGGTACCAGC...TGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCTGGTACCCCTTCATaGGGCAGAAGCGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: EAGRSTASQVSISPAAGPAGTPS*GRSVGT
Trigger: TGTGCCTACGCTTCTGCCGCATGAAGGGGTACCAGC...TGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CCATGGAGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATCCCGCTGCAGCGTCCTaGTCTACCTGCGATCCCGCG +
Preference number: 4 (lower is better)
Translates to: PWRGPGPSGPPRSGQVPDPAAAS*STCDPA
Trigger: CGCGGGATCGCAGGTAGAGCAGGACGCTGCAGCGGG...ATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp GGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCTGGGTAAATCTCTCCTaGGGGTCTTTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GAAQHLRCPSRRRRAQRTWVNLS*GSLPPR
Trigger: CCTGGGAGGCAAAGACCCCCAGGAGAGATTTACCCA...GGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR CCA 90 bp GTCCTGCTCTACCTGCGATCCCGCGCGCGATCCTGTGCGTGGACCCAAAGCCTCGGCCGTGGGGGTCGCTaGCGCTGCTGTAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: VLLYLRSRARSCAWTQSLGRGGR*RCCSCV
Trigger: AACACAGCTACAGCAGCGCCAGCGACCCCCACGGCC...GAGGCTTTGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp GCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCCTGCACGTCACCGTCTaGGTTACGGCAGAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: AQHSISGVHLAGGGPSGPLHVTV*VTAEVV
Trigger: CACAACTTCTGCCGTAACCCAGACGGTGACGTGCAG...GGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CTCCCCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCGCATCCCAGGTAGCCTaGCATGTGACAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: LPKATRGRAAPTQAQGRGASQVA*HVTGGD
Trigger: ATCCCCTCCTGTCACATGCCAGGCTACCTGGGATGC...GCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGGCATCCCAGGTAGCCTaGCATGTGACAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: QHSISGVHLAGGGPSGPSASQVA*HVTGGD
Trigger: ATCCCCTCCTGTCACATGCCAGGCTACCTGGGATGC...CGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp ACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACGCATCCCAGGTAGCCTaGCATGTGACAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: TRGRAAPTQAQGRGRAQHASQVA*HVTGGD
Trigger: ATCCCCTCCTGTCACATGCCAGGCTACCTGGGATGC...GTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp ACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAAGCGTAGGCACACCTaGACCGTGAGCTTCGTGGAG +
Preference number: 4 (lower is better)
Translates to: TRGRAAPTQAQGRGRAQHKRRHT*TVSFVE
Trigger: CTCCACGAAGCTCACGGTCCAGGTGTGCCTACGCTT...GTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCCACAGCTGTCCAGGGTaGCCGAAACAGATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: AQHSISGVHLAGGGPSGPHSCPG*PKQIWS
Trigger: TGACCAGATCTGTTTCGGCCACCCTGGACAGCTGTG...GGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp AGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGGCTGTCCAGTTCCCCTaGCAGGAGCCCACCGACACT +
Preference number: 4 (lower is better)
Translates to: SCPYTGARPRQGAAQHLRAVQFP*QEPTDT
Trigger: AGTGTCGGTGGGCTCCTGCCAGGGGAACTGGACAGC...CCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGCTGTCCAGTTCCCCTaGCAGGAGCCCACCGACACT +
Preference number: 4 (lower is better)
Translates to: RAAPTQAQGRGRAQHSISAVQFP*QEPTDT
Trigger: AGTGTCGGTGGGCTCCTGCCAGGGGAACTGGACAGC...TGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GGAGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCGAAGCCTTGCGCGTaGCCGCGCGCGTCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GEGLDHLDPHGQAKSQIIAKPCA*PRASLR
Trigger: CCGAAGCGACGCGCGCGGCCACGCGCAAGGCTTCGC...TATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGTCCATGGAGAGGGCCTaGACCATCTGGACCCCCACG +
Preference number: 4 (lower is better)
Translates to: RRKAEAGRSTASQVSISPSMERA*TIWTPT
Trigger: CGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATGGA...CGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGCCACATACAGGTCCATaGAGAGGGCCTGGACCATCT +
Preference number: 4 (lower is better)
Translates to: QGAAQHLRCPSRRRRAQRPHTGP*RGPGPS
Trigger: AGATGGTCCAGGCCCTCTCCATGGACCTGTATGTGG...CCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGACCATCGCAGCCCGCGGTAGGTaGGCGCGAAGCCTTGCGCGT +
Preference number: 4 (lower is better)
Translates to: PKPETTPTYRSMERAWTIAARGR*ARSLAR
Trigger: ACGCGCAAGGCTTCGCGCTCACCTACCGCGGGCTGC...GATGGTCCAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp AGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCGCAGCCCGCGGTAGGTaGGCGCGAAGCCTTGCGCGT +
Preference number: 4 (lower is better)
Translates to: RGPGPSGPPRSGQVPDNSAARGR*ARSLAR
Trigger: ACGCGCAAGGCTTCGCGCTCACCTACCGCGGGCTGC...GCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCTGTGACCTCTCACTaGGGACGGCAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: HRRKAEAGRSTASQVSISPVTSH*GRQSRT
Trigger: GGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGG...CGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CCAAGGCGACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGGTTTTTGCTGACCTGTaGCCTCTCACTGAGGACGGC +
Preference number: 4 (lower is better)
Translates to: PRRPEAELPLHRRKAEAGVFADL*PLTEDG
Trigger: GCCGTCCTCAGTGAGAGGTCACAGGTCAGCAAAAAC...CCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTCGCCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCAGAGGCCCCACGCGGCTaGAGCAGCGGGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: EGLDHLDPHGQAKSQIIAEAPRG*SSGRKR
Trigger: CCTCTTCCTCCCGCTGCTGCAGCCGCGTGGGGCCTC...TGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATGGGGGTCGCTGGCGCTaGTGTAGCTGTGTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: PTQAQGRGRAQHSISGVHGGRWR*CSCVAA
Trigger: CGCAGCAACACAGCTACAGCAGCGCCAGCGACCCCC...ATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GGCTGGAGGCACTCAGAGGCCGGTAGCCCGCGGCAGAACCCTCAGCCTGGGGGTAGTAGCGCCAGTAGATaGCCTCCTCTGTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GWRHSEAGSPRQNPQPGGSSASR*PPLSQP
Trigger: TGGCTGAGACAGAGGAGGGCATCTACTGGCGCTACT...ACCCCCAGGCTGAGGGTTCTGCCGCGGGCTACCGGCCTCTGAGTGCCTCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR GCA 90 bp AAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGTGAGCGCGAAGCCTTaGGCGTGGCCGCGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: KTSETRDHPHIQVHGEGLVSAKP*AWPRAS
Trigger: CGACGCGCGCGGCCACGCGCAAGGCTTCGCGCTCAC...CAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CCATGGAGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATGCGTCCTGCTCTACCTaGGATCCCGCGCGCGATCCT +
Preference number: 4 (lower is better)
Translates to: PWRGPGPSGPPRSGQVPDASCST*DPARDP
Trigger: AGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGC...ATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp CCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCGCTTTCCGTCTGGGGTaGGTAAATCTCTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PSCPYTGARPRQGAAQHLAFRLG*VNLSWG
Trigger: CCCCCAGGAGAGATTTACCCACCCCAGACGGAAAGC...GAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR CCA 90 bp GGAGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATATCTGGTCACAGTCGGTaGCGGGGGCCAGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: GEGLDHLDPHGQAKSQIISGHSR*RGPGVP
Trigger: GGGGACGCCTGGCCCCCGCCACCGACTGTGACCAGA...TATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp CCCAGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCGCGAAGCCTTGCGCGTaGCCGCGCGCGTCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PRGVQRPPKPETTPTYRSAKPCA*PRASLR
Trigger: CCGAAGCGACGCGCGCGGCCACGCGCAAGGCTTCGC...GGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGCGAAGCCTTGCGCGTaGCCGCGCGCGTCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: KTSETRDHPHIQVHGEGLAKPCA*PRASLR
Trigger: CCGAAGCGACGCGCGCGGCCACGCGCAAGGCTTCGC...CAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCCAGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCGCCCTCGGGGGCCTCTaGGTCCTCAGCGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: PRGVQRPPKPETTPTYRSALGGL*VLSGVL
Trigger: CAGGACGCCGCTGAGGACCCAGAGGCCCCCGAGGGC...GGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGACCCCTCGGGGCTGTTaGTACCACACAGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: ELPLHRRKAEAGRSTASQTPRGC*YHTAQL
Trigger: AAGCTGGGCTGTGTGGTACCAACAGCCCCGAGGGGT...CTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCTTCCTGTCCGACTTTTaGTCTCCCCAAGGCGACCAG +
Preference number: 4 (lower is better)
Translates to: RGRAAPTQAQGRGRAQHSFLSDF*SPQGDQ
Trigger: CTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAA...GCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATAGGGCCTGGACCATCTaGACCCCCACGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PTQAQGRGRAQHSISGVHRAWTI*TPTVRP
Trigger: TGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCT...ATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGACCATCCCCCTCGTCCGACTCTaGGCCGCGCTTTCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: PKPETTPTYRSMERAWTIPLVRL*AALSVW
Trigger: CCAGACGGAAAGCGCGGCTCAGAGTCGGACGAGGGG...GATGGTCCAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR TCA 90 bp TTGCTGACCTGTGACCTCTCACTGAGGACGGCAGTCCAGGACCACCCCCAGAGGGGGGGCGTTGTCCTCTaGCAGTCTCCCCTCGTCCGA +
Preference number: 4 (lower is better)
Translates to: LLTCDLSLRTAVQDHPQRGGVVL*QSPLVR
Trigger: TCGGACGAGGGGAGACTGTCAGAGGACAACGCCCCC...CCTCTGGGGGTGGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGGTCAGCAA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR TCA 90 bp TTGCTGACCTGTGACCTCTCACTGAGGACGGCAGTCCAGGACCACCCCCAGAGGGGCTGGGGGTGCCCCTaGGTCCACAAAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: LLTCDLSLRTAVQDHPQRGWGCP*VHKASQ
Trigger: CTGGGATGCTTTGTGGACTCAGGGGCACCCCCAGCC...CCTCTGGGGGTGGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGGTCAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATGTCAGAGAGCGGAGATaGGCGAGCGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PTQAQGRGRAQHSISGVHVRERR*ASAGSS
Trigger: AGAGCTCCCTGCGCTCGCTCATCTCCGCTCTCTGAC...ATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCCTGTGACCTCTCACTaGGGACGGCAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PTQAQGRGRAQHSISGVHPVTSH*GRQSRT
Trigger: GGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGG...ATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CATGGAGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATATTACGGCAGAAGTTGTaGGCGCCCAGCCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: HGEGLDHLDPHGQAKSQILRQKL*APSPQR
Trigger: CCGCTGGGGGCTGGGCGCGCACAACTTCTGCCGTAA...TATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CCCAGCGCCGGGGGCCCTTTTCCCGGAGCCAGCAGACAGCTCCTAGAGAGGGAGAGTAGCGCCAGTAGATaGCCTCCTCTGTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PSAGGPFPGASRQLLERESSASR*PPLSQP
Trigger: TGGCTGAGACAGAGGAGGGCATCTACTGGCGCTACT...CTCCCTCTCTAGGAGCTGTCTGCTGGCTCCGGGAAAAGGGCCCCCGGCGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR GCA 90 bp GGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGGGCCCAGGGCCCAGCTaGAGTTCCGGTCCGGCCCGT +
Preference number: 4 (lower is better)
Translates to: GVQRPPKPETTPTYRSMEGPGPS*SSGPAR
Trigger: ACGGGCCGGACCGGAACTGCAGCTGGGCCCTGGGCC...CTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AATCCCGCTGCAGCGTCCTGCTCTACCTGCGATCCCGCGCGCGATCCTGTGCGTCTGTGTTGCTGCGTCTaGTCCCAGAAGAGGCACGGG +
Preference number: 4 (lower is better)
Translates to: NPAAASCSTCDPARDPVRLCCCV*SQKRHG
Trigger: CCCGTGCCTCTTCTGGGACCAGACGCAGCAACACAG...ACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGCTGCAGCGGGATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp GGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGGCTGCAGCTCACGTTaGCCCCGTCGAGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GPPRSGQVPDNSTRCFLSGCSSR*PRRGAP
Trigger: CGGCGCCCCTCGACGGGGCCAACGTGAGCTGCAGCC...GGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGACCAAGTCCGGGGAGTAGATaGCGCCCTGAGGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LRNQRPPPHTGPWRGPGPSPGSR*RPEALS
Trigger: GGACAGCGCCTCAGGGCGTCATCTACTCCCCGGACT...TGGTCCAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp AGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCAGTCCGGGGAGTAGATaGCGCCCTGAGGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RGPGPSGPPRSGQVPDNSSPGSR*RPEALS
Trigger: GGACAGCGCCTCAGGGCGTCATCTACTCCCCGGACT...GCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp GGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGCAGCCCGCGGTAGGTaGGCGCGAAGCCTTGCGCGT +
Preference number: 4 (lower is better)
Translates to: GPPRSGQVPDNSTRCFLSAARGR*ARSLAR
Trigger: ACGCGCAAGGCTTCGCGCTCACCTACCGCGGGCTGC...GGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CATGGAGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATACCTGTGACCTCTCACTaGGGACGGCAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: HGEGLDHLDPHGQAKSQIPVTSH*GRQSRT
Trigger: GGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGG...TATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CTGCAGCGTCCTGCTCTACCTGCGATCCCGCGCGCGATCCTGTGCGTGGACCCAGTTTTTGCTGACCTGTaGCCTCTCACTGAGGACGGC +
Preference number: 4 (lower is better)
Translates to: LQRPALPAIPRAILCVDPVFADL*PLTEDG
Trigger: GCCGTCCTCAGTGAGAGGTCACAGGTCAGCAAAAAC...TGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR GCA 90 bp GACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGATCTCCTGGGGGTCTTTaGCTCCCAGGGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: DLRNQRPPPHTGPWRGPGSPGGL*LPGPLP
Trigger: GGGCAGAGGCCCTGGGAGGCAAAGACCCCCAGGAGA...TCCAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR GCA 90 bp AGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCTTACGGCAGAAGTTGTaGGCGCCCAGCCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RGPGPSGPPRSGQVPDNSLRQKL*APSPQR
Trigger: CCGCTGGGGGCTGGGCGCGCACAACTTCTGCCGTAA...GCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCAGCTGGTACCCCTTCATaGGGCAGAAGCGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: PYTGARPRQGAAQHLRCPAGTPS*GRSVGT
Trigger: TGTGCCTACGCTTCTGCCGCATGAAGGGGTACCAGC...TGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp AGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGAGGCGCGGAGCAGGCTaGCCGAAGCCGCGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: RGVQRPPKPETTPTYRSMRRGAG*PKPRRA
Trigger: TGCGCGACGCGGCTTCGGGCAGCCTGCTCCGCGCCT...CATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp AGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGTGAGCGCGAAGCCTTaGGCGTGGCCGCGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: RGSKTSETRDHPHIQVHGVSAKP*AWPRAS
Trigger: CGACGCGCGCGGCCACGCGCAAGGCTTCGCGCTCAC...TCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGACCAGACCAGAGGCCGAGCTaGCCCTACACAGGCGCAAGG +
Preference number: 4 (lower is better)
Translates to: LRNQRPPPHTGPWRGPGPDQRPS*PYTGAR
Trigger: CCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTC...TGGTCCAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTCTGCGGGCACACGGCTaGGGTGAGGATGGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: GPSGPPRSGQVPDNSTRCLRAHG*GEDGRE
Trigger: CTCGCGCCCATCCTCACCGCAGCCGTGTGCCCGCAG...ACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572045.5
CDS-3UTR CCA 90 bp CATGGAGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAGCTGTCCAGTTCCCCTaGCAGGAGCCCACCGACACT +
Preference number: 4 (lower is better)
Translates to: HGEGLDHLDPHGQAKSQIAVQFP*QEPTDT
Trigger: AGTGTCGGTGGGCTCCTGCCAGGGGAACTGGACAGC...TATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTGCGAAGCCTTGCGCGTaGCCGCGCGCGTCGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PHGQAKSQIIAPDVSCPTAKPCA*PRASLR
Trigger: CCGAAGCGACGCGCGCGGCCACGCGCAAGGCTTCGC...AGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTGCCCTCGGGGGCCTCTaGGTCCTCAGCGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: LDPHGQAKSQIIAPDVSCALGGL*VLSGVL
Trigger: CAGGACGCCGCTGAGGACCCAGAGGCCCCCGAGGGC...ACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGAAGGGCCTGGACCATCTaGACCCCCACGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: DLRNQRPPPHTGPWRGPGRAWTI*TPTVRP
Trigger: TGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCT...TCCAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AGAGGGAGCAGACATCAGCCGAGCCGGTCCAATCCCGCTGCAGCGTCCTGCTCTTGTCTCAGCGAGCTCTaGGCGGTGCCTCAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: RGSRHQPSRSNPAAASCSCLSEL*AVPQPL
Trigger: TAGAGGCTGAGGCACCGCCCAGAGCTCGCTGAGACA...AGAGCAGGACGCTGCAGCGGGATTGGACCGGCTCGGCTGATGTCTGCTCCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572045.5
CDS-3UTR TCA 90 bp GGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGCCCCTCGTCCGACTCTaGGCCGCGCTTTCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: GVQRPPKPETTPTYRSMEPLVRL*AALSVW
Trigger: CCAGACGGAAAGCGCGGCTCAGAGTCGGACGAGGGG...CTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR TCA 90 bp GGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGGGCACACCTGGACCGTaGGCTTCGTGGAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: GVQRPPKPETTPTYRSMEGTPGP*ASWRCR
Trigger: GCGGCACCTCCACGAAGCTCACGGTCCAGGTGTGCC...CTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp AGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGCGAAGAGGCGGAAGGTaGGCTCCAGCGCGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: RGVQRPPKPETTPTYRSMRRGGR*APARRL
Trigger: CAGGCGCCGCGCTGGAGCTCACCTTCCGCCTCTTCG...CATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp AGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGGCCCCACGCGGCTaGAGCAGCGGGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RGVQRPPKPETTPTYRSMEAPRG*SSGRKR
Trigger: CCTCTTCCTCCCGCTGCTGCAGCCGCGTGGGGCCTC...CATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCAAGTAGCGCCAGTAGATaGCCTCCTCTGTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PYTGARPRQGAAQHLRCPSSASR*PPLSQP
Trigger: TGGCTGAGACAGAGGAGGGCATCTACTGGCGCTACT...TGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGAGTAGCGCCAGTAGATaGCCTCCTCTGTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: HRRKAEAGRSTASQVSISSSASR*PPLSQP
Trigger: TGGCTGAGACAGAGGAGGGCATCTACTGGCGCTACT...CGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGACCAGCATTCGGACAGGCCTaGACTGTGCAGGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LRNQRPPPHTGPWRGPGPAFGQA*TVQAPS
Trigger: GCTGGGAGCCTGCACAGTCCAGGCCTGTCCGAATGC...TGGTCCAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCCTGTGTTGCTGCGTCTaGTCCCAGAAGAGGCACGGG +
Preference number: 4 (lower is better)
Translates to: GPGPSGPPRSGQVPDNSTLCCCV*SQKRHG
Trigger: CCCGTGCCTCTTCTGGGACCAGACGCAGCAACACAG...GGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CATGGAGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAACCCCTCGGGGCTGTTaGTACCACACAGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: HGEGLDHLDPHGQAKSQITPRGC*YHTAQL
Trigger: AAGCTGGGCTGTGTGGTACCAACAGCCCCGAGGGGT...TATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp TGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCACATACAGGTCCATaGAGAGGGCCTGGACCATCT +
Preference number: 4 (lower is better)
Translates to: CPYTGARPRQGAAQHLRCPHTGP*RGPGPS
Trigger: AGATGGTCCAGGCCCTCTCCATGGACCTGTATGTGG...ACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp GGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTGGCTGGGGGTGCCCCTaGGTCCACAAAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: GPSGPPRSGQVPDNSTRCGWGCP*VHKASQ
Trigger: CTGGGATGCTTTGTGGACTCAGGGGCACCCCCAGCC...ACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGTTACGGCAGAAGTTGTaGGCGCCCAGCCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: GVQRPPKPETTPTYRSMELRQKL*APSPQR
Trigger: CCGCTGGGGGCTGGGCGCGCACAACTTCTGCCGTAA...CTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCCGCGCGCGATCCTGTaGGTGGACCCAAAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: PSGPPRSGQVPDNSTRCFPRAIL*VDPKPR
Trigger: GCGAGGCTTTGGGTCCACGCACAGGATCGCGCGCGG...GAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp AGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCCTGTGTTGCTGCGTCTaGTCCCAGAAGAGGCACGGG +
Preference number: 4 (lower is better)
Translates to: RGPGPSGPPRSGQVPDNSLCCCV*SQKRHG
Trigger: CCCGTGCCTCTTCTGGGACCAGACGCAGCAACACAG...GCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTGCACGTCACCGTCTaGGTTACGGCAGAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: PTQAQGRGRAQHSISGVHLHVTV*VTAEVV
Trigger: CACAACTTCTGCCGTAACCCAGACGGTGACGTGCAG...ATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCATGGAGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATCTGCACGTCACCGTCTaGGTTACGGCAGAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: PWRGPGPSGPPRSGQVPDLHVTV*VTAEVV
Trigger: CACAACTTCTGCCGTAACCCAGACGGTGACGTGCAG...ATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAAGCGTAGGCACACCTaGACCGTGAGCTTCGTGGAG +
Preference number: 4 (lower is better)
Translates to: GPGPSGPPRSGQVPDNSTKRRHT*TVSFVE
Trigger: CTCCACGAAGCTCACGGTCCAGGTGTGCCTACGCTT...GGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCTCCACGCCCGCCAGCTaGTACCCCTTCATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GPPRSGQVPDNSTRCFLSSTPAS*YPFMRQ
Trigger: CTGCCGCATGAAGGGGTACCAGCTGGCGGGCGTGGA...GGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp GGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGACCATCTaGACCCCCACGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GVQRPPKPETTPTYRSMERAWTI*TPTVRP
Trigger: TGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCT...CTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AGAGAGGGAGCAGACATCAGCCGAGCCGGTCCAATCCCGCTGCAGCGTCCTGCTCCACATACAGGTCCATaGAGAGGGCCTGGACCATCT +
Preference number: 4 (lower is better)
Translates to: REGADISRAGPIPLQRPAPHTGP*RGPGPS
Trigger: AGATGGTCCAGGCCCTCTCCATGGACCTGTATGTGG...AGCAGGACGCTGCAGCGGGATTGGACCGGCTCGGCTGATGTCTGCTCCCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR TCA 90 bp AGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGAGTCCGGGGAGTAGATaGCGCCCTGAGGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RGVQRPPKPETTPTYRSMSPGSR*RPEALS
Trigger: GGACAGCGCCTCAGGGCGTCATCTACTCCCCGGACT...CATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTAGTCCGGGGAGTAGATaGCGCCCTGAGGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PHGQAKSQIIAPDVSCPTSPGSR*RPEALS
Trigger: GGACAGCGCCTCAGGGCGTCATCTACTCCCCGGACT...AGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp GGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGCCTGTGACCTCTCACTaGGGACGGCAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: GVQRPPKPETTPTYRSMEPVTSH*GRQSRT
Trigger: GGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGG...CTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCGGGGGTCGCTGGCGCTaGTGTAGCTGTGTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: PSGPPRSGQVPDNSTRCFGGRWR*CSCVAA
Trigger: CGCAGCAACACAGCTACAGCAGCGCCAGCGACCCCC...GAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTGGGGGTCGCTGGCGCTaGTGTAGCTGTGTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: DHLDPHGQAKSQIIAPDVGGRWR*CSCVAA
Trigger: CGCAGCAACACAGCTACAGCAGCGCCAGCGACCCCC...AACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCGACCAGAGGCCGAGCTaGCCCTACACAGGCGCAAGG +
Preference number: 4 (lower is better)
Translates to: PSGPPRSGQVPDNSTRCFDQRPS*PYTGAR
Trigger: CCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTC...GAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTGCGTCCTGCTCTACCTaGGATCCCGCGCGCGATCCT +
Preference number: 4 (lower is better)
Translates to: DHLDPHGQAKSQIIAPDVASCST*DPARDP
Trigger: AGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGC...AACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp TTGCTGACCTGTGACCTCTCACTGAGGACGGCAGTCCAGGACCACCCCCAGAGGTGGGTAAATCTCTCCTaGGGGTCTTTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLTCDLSLRTAVQDHPQRWVNLS*GSLPPR
Trigger: CCTGGGAGGCAAAGACCCCCAGGAGAGATTTACCCA...CCTCTGGGGGTGGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGGTCAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR CCA 90 bp GGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGGCATTCGGACAGGCCTaGACTGTGCAGGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GVQRPPKPETTPTYRSMEAFGQA*TVQAPS
Trigger: GCTGGGAGCCTGCACAGTCCAGGCCTGTCCGAATGC...CTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGCATTCGGACAGGCCTaGACTGTGCAGGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPPRSGQVPDNSTRCFLSAFGQA*TVQAPS
Trigger: GCTGGGAGCCTGCACAGTCCAGGCCTGTCCGAATGC...GGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp TTGCTGACCTGTGACCTCTCACTGAGGACGGCAGTCCAGGACCACCCCCAGAGGCTGCACGTCACCGTCTaGGTTACGGCAGAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: LLTCDLSLRTAVQDHPQRLHVTV*VTAEVV
Trigger: CACAACTTCTGCCGTAACCCAGACGGTGACGTGCAG...CCTCTGGGGGTGGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGGTCAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCCAGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCTGGCCGAAACAGATCTaGTCACAGTCGGTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PRGVQRPPKPETTPTYRSWPKQI*SQSVAG
Trigger: CCCCGCCACCGACTGTGACCAGATCTGTTTCGGCCA...GGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp CATGGAGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATACCACATACAGGTCCATaGAGAGGGCCTGGACCATCT +
Preference number: 4 (lower is better)
Translates to: HGEGLDHLDPHGQAKSQIPHTGP*RGPGPS
Trigger: AGATGGTCCAGGCCCTCTCCATGGACCTGTATGTGG...TATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp GAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCAGTTTTTGCTGACCTGTaGCCTCTCACTGAGGACGGC +
Preference number: 4 (lower is better)
Translates to: EGLDHLDPHGQAKSQIIAVFADL*PLTEDG
Trigger: GCCGTCCTCAGTGAGAGGTCACAGGTCAGCAAAAAC...TGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp AATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGACCAGAGGTTACGGCAGAAGTTGTaGGCGCCCAGCCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: NSTRCFLSDFWSPQGDQRLRQKL*APSPQR
Trigger: CCGCTGGGGGCTGGGCGCGCACAACTTCTGCCGTAA...CCTCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp TGGAGAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGTAGCGCCAGTAGATaGCCTCCTCTGTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: WRGPGPSGPPRSGQVPDNSSASR*PPLSQP
Trigger: TGGCTGAGACAGAGGAGGGCATCTACTGGCGCTACT...ATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGCCGGTCCAATCCCGCTaGAGCGTCCTGCTCTACCTG +
Preference number: 4 (lower is better)
Translates to: VQRPPKPETTPTYRSMERPVQSR*SVLLYL
Trigger: CAGGTAGAGCAGGACGCTGCAGCGGGATTGGACCGG...CCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR GCA 90 bp CTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGGTCCAATCCCGCTaGAGCGTCCTGCTCTACCTG +
Preference number: 4 (lower is better)
Translates to: LDPHGQAKSQIIAPDVSCPVQSR*SVLLYL
Trigger: CAGGTAGAGCAGGACGCTGCAGCGGGATTGGACCGG...ACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp AGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGCATTCGGACAGGCCTaGACTGTGCAGGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RGSKTSETRDHPHIQVHGAFGQA*TVQAPS
Trigger: GCTGGGAGCCTGCACAGTCCAGGCCTGTCCGAATGC...TCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGACCAGAGGGGCCGTGGGGGTCGCTaGCGCTGCTGTAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: NSTRCFLSDFWSPQGDQRGRGGR*RCCSCV
Trigger: AACACAGCTACAGCAGCGCCAGCGACCCCCACGGCC...CCTCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGACCAGAGGCCGAGGCATCCCAGGTAGCCTaGCATGTGACAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: HQMFPVRLLVSPRRPEAEASQVA*HVTGGD
Trigger: ATCCCCTCCTGTCACATGCCAGGCTACCTGGGATGC...CTCGGCCTCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCCAGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCAAGCGTAGGCACACCTaGACCGTGAGCTTCGTGGAG +
Preference number: 4 (lower is better)
Translates to: PRGVQRPPKPETTPTYRSKRRHT*TVSFVE
Trigger: CTCCACGAAGCTCACGGTCCAGGTGTGCCTACGCTT...GGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGACCAGAGGTCCACGCCCGCCAGCTaGTACCCCTTCATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: NSTRCFLSDFWSPQGDQRSTPAS*YPFMRQ
Trigger: CTGCCGCATGAAGGGGTACCAGCTGGCGGGCGTGGA...CCTCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp CTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGACCATTCCTGTCCGACTTTTaGTCTCCCCAAGGCGACCAG +
Preference number: 4 (lower is better)
Translates to: LRNQRPPPHTGPWRGPGPFLSDF*SPQGDQ
Trigger: CTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAA...TGGTCCAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGTCCATGGAGAGGGCCTaGACCATCTGGACCCCCACG +
Preference number: 4 (lower is better)
Translates to: RGVQRPPKPETTPTYRSMSMERA*TIWTPT
Trigger: CGTGGGGGTCCAGATGGTCCAGGCCCTCTCCATGGA...CATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp GTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGGCTGGGGGTGCCCCTaGGTCCACAAAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: VPDNSTRCFLSDFWSPQGGWGCP*VHKASQ
Trigger: CTGGGATGCTTTGTGGACTCAGGGGCACCCCCAGCC...GCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGCACACCTGGACCGTaGGCTTCGTGGAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: HGQAKSQIIAPDVSCPTFGTPGP*ASWRCR
Trigger: GCGGCACCTCCACGAAGCTCACGGTCCAGGTGTGCC...AAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGACCAGAGGCCGAGGTTTTTGCTGACCTGTaGCCTCTCACTGAGGACGGC +
Preference number: 4 (lower is better)
Translates to: HQMFPVRLLVSPRRPEAEVFADL*PLTEDG
Trigger: GCCGTCCTCAGTGAGAGGTCACAGGTCAGCAAAAAC...CTCGGCCTCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp TCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTGAGGCCCCACGCGGCTaGAGCAGCGGGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SGQVPDNSTRCFLSDFWSEAPRG*SSGRKR
Trigger: CCTCTTCCTCCCGCTGCTGCAGCCGCGTGGGGCCTC...AGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCTTACGGCAGAAGTTGTaGGCGCCCAGCCCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: GQVPDNSTRCFLSDFWSPLRQKL*APSPQR
Trigger: CCGCTGGGGGCTGGGCGCGCACAACTTCTGCCGTAA...GGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGCTGGTACCCCTTCATaGGGCAGAAGCGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: GPPRSGQVPDNSTRCFLSAGTPS*GRSVGT
Trigger: TGTGCCTACGCTTCTGCCGCATGAAGGGGTACCAGC...GGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp GGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCGACCAGAGGCCGAGCTaGCCCTACACAGGCGCAAGG +
Preference number: 4 (lower is better)
Translates to: GQVPDNSTRCFLSDFWSPDQRPS*PYTGAR
Trigger: CCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTC...GGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp TCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGACCATTGGGTAAATCTCTCCTaGGGGTCTTTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SETRDHPHIQVHGEGLDHWVNLS*GSLPPR
Trigger: CCTGGGAGGCAAAGACCCCCAGGAGAGATTTACCCA...ATGGTCCAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR CCA 90 bp CCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTCTGTGTTGCTGCGTCTaGTCCCAGAAGAGGCACGGG +
Preference number: 4 (lower is better)
Translates to: PHGQAKSQIIAPDVSCPTLCCCV*SQKRHG
Trigger: CCCGTGCCTCTTCTGGGACCAGACGCAGCAACACAG...AGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAACCCCTCGGGGCTGTTaGTACCACACAGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RGSKTSETRDHPHIQVHGTPRGC*YHTAQL
Trigger: AAGCTGGGCTGTGTGGTACCAACAGCCCCGAGGGGT...TCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCACCCCTCGGGGCTGTTaGTACCACACAGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: PSGPPRSGQVPDNSTRCFTPRGC*YHTAQL
Trigger: AAGCTGGGCTGTGTGGTACCAACAGCCCCGAGGGGT...GAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCAGGGCCTGGACCATCTaGACCCCCACGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: VPDNSTRCFLSDFWSPQGRAWTI*TPTVRP
Trigger: TGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCT...GCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGAGCTCTGTTCCCTTCTaGGGCTCCAGCTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: VQRPPKPETTPTYRSMERSSVPF*GSSSPP
Trigger: TGGTGGGGAGCTGGAGCCCCAGAAGGGAACAGAGCT...CCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR TCA 90 bp CAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCACACCTGGACCGTaGGCTTCGTGGAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: QVPDNSTRCFLSDFWSPQGTPGP*ASWRCR
Trigger: GCGGCACCTCCACGAAGCTCACGGTCCAGGTGTGCC...TTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp CATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCGCTGGTACCCCTTCATaGGGCAGAAGCGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: HLDPHGQAKSQIIAPDVSAGTPS*GRSVGT
Trigger: TGTGCCTACGCTTCTGCCGCATGAAGGGGTACCAGC...GGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTCTGCACGTCACCGTCTaGGTTACGGCAGAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: GPSGPPRSGQVPDNSTRCLHVTV*VTAEVV
Trigger: CACAACTTCTGCCGTAACCCAGACGGTGACGTGCAG...ACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGCATCCCAGGTAGCCTaGCATGTGACAGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: RGVQRPPKPETTPTYRSMASQVA*HVTGGD
Trigger: ATCCCCTCCTGTCACATGCCAGGCTACCTGGGATGC...CATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGCACAGCTGTCCAGGGTaGCCGAAACAGATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GVQRPPKPETTPTYRSMEHSCPG*PKQIWS
Trigger: TGACCAGATCTGTTTCGGCCACCCTGGACAGCTGTG...CTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp CACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGCAGGGAGCTCTGGCTaGAGGCACTCAGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: HGQAKSQIIAPDVSCPTFAGSSG*RHSEAG
Trigger: ACCGGCCTCTGAGTGCCTCCAGCCAGAGCTCCCTGC...AAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCTCGCCGCCACACAGCTaGTACCCCTTCATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GQVPDNSTRCFLSDFWSPSPPHS*YPFMRQ
Trigger: CTGCCGCATGAAGGGGTACCAGCTGTGTGGCGGCGA...GGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571007.5
ENST00000575885.5
CDS-3UTR TCA 90 bp TCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTGGCTGGGGGTGCCCCTaGGTCCACAAAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: SGQVPDNSTRCFLSDFWSGWGCP*VHKASQ
Trigger: CTGGGATGCTTTGTGGACTCAGGGGCACCCCCAGCC...AGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCGTCAGAGAGCGGAGATaGGCGAGCGCAGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: QAKSQIIAPDVSCPTFGLVRERR*ASAGSS
Trigger: AGAGCTCCCTGCGCTCGCTCATCTCCGCTCTCTGAC...GAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp CAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCTGTGACCTCTCACTaGGGACGGCAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: QAKSQIIAPDVSCPTFGLPVTSH*GRQSRT
Trigger: GGTCCTGGACTGCCGTCCTCAGTGAGAGGTCACAGG...GAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR TCA 90 bp AGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGTTTTTGCTGACCTGTaGCCTCTCACTGAGGACGGC +
Preference number: 4 (lower is better)
Translates to: RGVQRPPKPETTPTYRSMVFADL*PLTEDG
Trigger: GCCGTCCTCAGTGAGAGGTCACAGGTCAGCAAAAAC...CATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR GCA 90 bp TCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTTCTCCTGGGGGTCTTTaGCTCCCAGGGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SGQVPDNSTRCFLSDFWSSPGGL*LPGPLP
Trigger: GGGCAGAGGCCCTGGGAGGCAAAGACCCCCAGGAGA...AGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR GCA 90 bp CCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTAGTAGCGCCAGTAGATaGCCTCCTCTGTCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PHGQAKSQIIAPDVSCPTSSASR*PPLSQP
Trigger: TGGCTGAGACAGAGGAGGGCATCTACTGGCGCTACT...AGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCTGGGTAAATCTCTCCTaGGGGTCTTTGCCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PSGPPRSGQVPDNSTRCFWVNLS*GSLPPR
Trigger: CCTGGGAGGCAAAGACCCCCAGGAGAGATTTACCCA...GAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR CCA 90 bp AGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGCACAGCTGTCCAGGGTaGCCGAAACAGATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: RGVQRPPKPETTPTYRSMHSCPG*PKQIWS
Trigger: TGACCAGATCTGTTTCGGCCACCCTGGACAGCTGTG...CATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CCA 90 bp CAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGCAGGGAGCTCTGGCTaGAGGCACTCAGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: QVPDNSTRCFLSDFWSPQAGSSG*RHSEAG
Trigger: ACCGGCCTCTGAGTGCCTCCAGCCAGAGCTCCCTGC...TTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp TCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTGCAGGGAGCTCTGGCTaGAGGCACTCAGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: SGQVPDNSTRCFLSDFWSAGSSG*RHSEAG
Trigger: ACCGGCCTCTGAGTGCCTCCAGCCAGAGCTCCCTGC...AGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGATTCCTGTCCGACTTTTaGTCTCCCCAAGGCGACCAG +
Preference number: 4 (lower is better)
Translates to: RGSKTSETRDHPHIQVHGFLSDF*SPQGDQ
Trigger: CTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAA...TCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTCCACATACAGGTCCATaGAGAGGGCCTGGACCATCT +
Preference number: 4 (lower is better)
Translates to: DHLDPHGQAKSQIIAPDVPHTGP*RGPGPS
Trigger: AGATGGTCCAGGCCCTCTCCATGGACCTGTATGTGG...AACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGCCACATACAGGTCCATaGAGAGGGCCTGGACCATCT +
Preference number: 4 (lower is better)
Translates to: VQRPPKPETTPTYRSMERPHTGP*RGPGPS
Trigger: AGATGGTCCAGGCCCTCTCCATGGACCTGTATGTGG...CCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp ATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGACCAGATCGCCGCCACACAGCTaGTACCCCTTCATGCGGCAG +
Preference number: 4 (lower is better)
Translates to: IIAPDVSCPTFGLPKATRSPPHS*YPFMRQ
Trigger: CTGCCGCATGAAGGGGTACCAGCTGTGTGGCGGCGA...TCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571007.5
ENST00000575885.5
CDS-3UTR GCA 90 bp GTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGCTGGTACCCCTTCATaGGGCAGAAGCGTAGGCACA +
Preference number: 4 (lower is better)
Translates to: VPDNSTRCFLSDFWSPQGAGTPS*GRSVGT
Trigger: TGTGCCTACGCTTCTGCCGCATGAAGGGGTACCAGC...GCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp ATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGACCAGACTGTGTTGCTGCGTCTaGTCCCAGAAGAGGCACGGG +
Preference number: 4 (lower is better)
Translates to: IIAPDVSCPTFGLPKATRLCCCV*SQKRHG
Trigger: CCCGTGCCTCTTCTGGGACCAGACGCAGCAACACAG...TCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp TCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTGCTGTCCAGTTCCCCTaGCAGGAGCCCACCGACACT +
Preference number: 4 (lower is better)
Translates to: SGQVPDNSTRCFLSDFWSAVQFP*QEPTDT
Trigger: AGTGTCGGTGGGCTCCTGCCAGGGGAACTGGACAGC...AGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp AATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGACCAGAGGTTCCTGTCCGACTTTTaGTCTCCCCAAGGCGACCAG +
Preference number: 4 (lower is better)
Translates to: NSTRCFLSDFWSPQGDQRFLSDF*SPQGDQ
Trigger: CTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAA...CCTCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCCTGCACGTCACCGTCTaGGTTACGGCAGAAGTTGTG +
Preference number: 4 (lower is better)
Translates to: VPDNSTRCFLSDFWSPQGLHVTV*VTAEVV
Trigger: CACAACTTCTGCCGTAACCCAGACGGTGACGTGCAG...GCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp ATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGACCAGAAAGCGTAGGCACACCTaGACCGTGAGCTTCGTGGAG +
Preference number: 4 (lower is better)
Translates to: IIAPDVSCPTFGLPKATRKRRHT*TVSFVE
Trigger: CTCCACGAAGCTCACGGTCCAGGTGTGCCTACGCTT...TCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp TCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTACCCCTCGGGGCTGTTaGTACCACACAGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SGQVPDNSTRCFLSDFWSTPRGC*YHTAQL
Trigger: AAGCTGGGCTGTGTGGTACCAACAGCCCCGAGGGGT...AGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp GGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCTTCCTGTCCGACTTTTaGTCTCCCCAAGGCGACCAG +
Preference number: 4 (lower is better)
Translates to: GQVPDNSTRCFLSDFWSPFLSDF*SPQGDQ
Trigger: CTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAA...GGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTTCCTGTCCGACTTTTaGTCTCCCCAAGGCGACCAG +
Preference number: 4 (lower is better)
Translates to: PRSGQVPDNSTRCFLSDFFLSDF*SPQGDQ
Trigger: CTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAA...AAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CCA 90 bp CAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCACAGCTGTCCAGGGTaGCCGAAACAGATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: QAKSQIIAPDVSCPTFGLHSCPG*PKQIWS
Trigger: TGACCAGATCTGTTTCGGCCACCCTGGACAGCTGTG...GAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS TCA 90 bp CGGGCACACGGCTGCGGTGAGGATGGGCGCGAGGGGGCGGCTCCCTaGCTCACTCCCGTCCCGCGCGCCCGCCTCACCCCCAATCGCGGC +
Preference number: 5 (lower is better)
Translates to: RAHGCGEDGREGAAP*LTPVPRARLTPNRG
Trigger: GCCGCGATTGGGGGTGAGGCGGGCGCGCGGGACGGGAGTGAGTCAGGGAGCCGCCCCCTCGCGCCCATCCTCACCGCAGCCGTGTGCCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572045.5
CDS-3UTR CAA 90 bp GCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCGGTGAGCGCGAAGCCTaGCGCGTGGCCGCGCGCGTC +
Preference number: 5 (lower is better)
Translates to: AEAGRSTASQVSISPAAGGEREA*RVAARV
Trigger: GACGCGCGCGGCCACGCGCAAGGCTTCGCGCTCACC...GCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS TCA 90 bp GCCGTCACCGTCGAGAAGACCCGGGCTGCGGGCACACGGCTGCGGTaGGGATGGGCGCGAGGGGGCGGCTCCCTGACTCACTCCCGTCCC +
Preference number: 5 (lower is better)
Translates to: AVTVEKTRAAGTRLR*GWARGGGSLTHSRP
Trigger: GGGACGGGAGTGAGTCAGGGAGCCGCCCCCTCGCGCCCATCCTCACCGCAGCCGTGTGCCCGCAGCCCGGGTCTTCTCGACGGTGACGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572045.5
CDS-3UTR CAA 90 bp AGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGGTGAGCGCGAAGCCTaGCGCGTGGCCGCGCGCGTC +
Preference number: 5 (lower is better)
Translates to: RPRQGAAQHLRCPSRRRRGEREA*RVAARV
Trigger: GACGCGCGCGGCCACGCGCAAGGCTTCGCGCTCACC...CCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp AGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGGGCTGCAGCTCACGTaGGCCCCGTCGAGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: RPRQGAAQHLRCPSRRRRGLQLT*APSRGA
Trigger: GGCGCCCCTCGACGGGGCCAACGTGAGCTGCAGCCC...CCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp GACCAGAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCAGGGCTGCAGCTCACGTaGGCCCCGTCGAGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: DQRPSCPYTGARPRQGAAGLQLT*APSRGA
Trigger: GGCGCCCCTCGACGGGGCCAACGTGAGCTGCAGCCC...TGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTCTGGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS GCA 90 bp CAGCAGCAGCACCGAGACAGCCGTCACCGTCGAGAAGACCCGGGCTaGGGGCACACGGCTGCGGTGAGGATGGGCGCGAGGGGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: QQQHRDSRHRREDPG*GHTAAVRMGARGRL
Trigger: GAGCCGCCCCCTCGCGCCCATCCTCACCGCAGCCGTGTGCCCGCAGCCCGGGTCTTCTCGACGGTGACGGCTGTCTCGGTGCTGCTGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572045.5
CDS GCA 90 bp TCTGGTCCCAGAAGAGGCACGGGCGGCCCGCCCCGCGCGGGCCAGTaGGGTTCTGGTGGCCGCGGTAGTCAGCCCCATTCACCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: SGPRRGTGGPPRAGQ*GSGGRGSQPHSPGS
Trigger: GCTTCCAGGTGAATGGGGCTGACTACCGCGGCCACCAGAACCGCACTGGCCCGCGCGGGGCGGGCCGCCCGTGCCTCTTCTGGGACCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp CACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCCTCGGGGGGGTTACGGCAGAAGTaGTGCGCGCCCAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: HSISGVHLAGGGPSGPSGGLRQK*CAPSPQ
Trigger: CTGGGGGCTGGGCGCGCACAACTTCTGCCGTAACCC...CCCCGAGGGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTG
72% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp CGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGAGCGCGAAGCCTaGCGCGTGGCCGCGCGCGTC +
Preference number: 5 (lower is better)
Translates to: RAAPTQAQGRGRAQHSISGEREA*RVAARV
Trigger: GACGCGCGCGGCCACGCGCAAGGCTTCGCGCTCACC...TGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp CTGCAGCGTCCTGCTCTACCTGCGATCCCGCGCGCGATCCTGTGCGTGGACCCAGGTGAGCGCGAAGCCTaGCGCGTGGCCGCGCGCGTC +
Preference number: 5 (lower is better)
Translates to: LQRPALPAIPRAILCVDPGEREA*RVAARV
Trigger: GACGCGCGCGGCCACGCGCAAGGCTTCGCGCTCACC...TGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGCAGGACGCTGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CAA 90 bp AGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGGGGCTGCAGCTCACGTaGGCCCCGTCGAGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: SCPYTGARPRQGAAQHLRGLQLT*APSRGA
Trigger: GGCGCCCCTCGACGGGGCCAACGTGAGCTGCAGCCC...CCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp GCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCACCCCTCGGGGCTGTaGGTACCACACAGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: AEAGRSTASQVSISPAAGHPSGL*VPHSPA
Trigger: AGCTGGGCTGTGTGGTACCAACAGCCCCGAGGGGTG...GCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS CCA 90 bp GGCAGAAGTTGTGCGCGCCCAGCCCCCAGCGGCCGTGGGGGTCGCTaGCGCTGCTGTAGCTGTGTTGCTGCGTCTGGTCCCAGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: GRSCARPAPSGRGGR*RCCSCVAASGPRRG
Trigger: GCCTCTTCTGGGACCAGACGCAGCAACACAGCTACAGCAGCGCCAGCGACCCCCACGGCCGCTGGGGGCTGGGCGCGCACAACTTCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS TCA 90 bp AGTTCCGGTCCGGCCCGTACTCGTCCGGGAAGTCCGGGGAGTAGATaGCGCCCTGAGGCGCTGTCCAGTTCCCCTGGCAGGAGCCCACCG +
Preference number: 5 (lower is better)
Translates to: SSGPARTRPGSPGSR*RPEALSSSPGRSPP
Trigger: CGGTGGGCTCCTGCCAGGGGAACTGGACAGCGCCTCAGGGCGTCATCTACTCCCCGGACTTCCCGGACGAGTACGGGCCGGACCGGAACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS CCA 90 bp CCCGCCAGCTGGTACCCCTTCATGCGGCAGAAGCGTAGGCACACCTaGACCGTGAGCTTCGTGGAGGTGCCGCTGGGGCCGCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: PASWYPFMRQKRRHT*TVSFVEVPLGPLRA
Trigger: AGCCCTCAGCGGCCCCAGCGGCACCTCCACGAAGCTCACGGTCCAGGTGTGCCTACGCTTCTGCCGCATGAAGGGGTACCAGCTGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CAA 90 bp GCTCTACCTGCGATCCCGCGCGCGATCCTGTGCGTGGACCCAAAGCCTCGCTCCCTCTCCTGGGGGTCTTaGCCTCCCAGGGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: ALPAIPRAILCVDPKPRSLSWGS*PPRASA
Trigger: GGCAGAGGCCCTGGGAGGCAAAGACCCCCAGGAGAG...GGAGCGAGGCTTTGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572045.5
CDS-3UTR CAA 90 bp GCTCTACCTGCGATCCCGCGCGCGATCCTGTGCGTGGACCCAAAGCCTCGCTCCGGGTTACGGCAGAAGTaGTGCGCGCCCAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: ALPAIPRAILCVDPKPRSGLRQK*CAPSPQ
Trigger: CTGGGGGCTGGGCGCGCACAACTTCTGCCGTAACCC...GGAGCGAGGCTTTGGGTCCACGCACAGGATCGCGCGCGGGATCGCAGGTAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CAA 90 bp GGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCGGGCTGCAGCTCACGTaGGCCCCGTCGAGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: GPGPSGPPRSGQVPDNSTGLQLT*APSRGA
Trigger: GGCGCCCCTCGACGGGGCCAACGTGAGCTGCAGCCC...GGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS CCA 90 bp CACACAGCTGTCCAGGGTGGCCGAAACAGATCTGGTCACAGTCGGTaGCGGGGGCCAGGCGTCCCCGGGCCAGGTCGCTTTCAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: HTAVQGGRNRSGHSR*RGPGVPGPGRFQSH
Trigger: GTGGCTCTGAAAGCGACCTGGCCCGGGGACGCCTGGCCCCCGCCACCGACTGTGACCAGATCTGTTTCGGCCACCCTGGACAGCTGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CAA 90 bp GGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGGCCCAGCGGACCGCTGCTGTAGCTGTGTaGCTGCGTCTGGTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: GAAQHLRCPSRRRRAQRTAAVAV*LRLVPE
Trigger: TTCTGGGACCAGACGCAGCAACACAGCTACAGCAGC...GGTCCGCTGGGCCCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp CCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGACCATCGGTGAGCGCGAAGCCTaGCGCGTGGCCGCGCGCGTC +
Preference number: 5 (lower is better)
Translates to: PKPETTPTYRSMERAWTIGEREA*RVAARV
Trigger: GACGCGCGCGGCCACGCGCAAGGCTTCGCGCTCACC...GATGGTCCAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS CCA 90 bp CCACACAGCTGGTACCCCTTCATGCGGCAGAAGCGTAGGCACACCTaGACCGTGAGCTTCGTGGAGGTGCCGCTGGGGCCGCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: PHSWYPFMRQKRRHT*TVSFVEVPLGPLRA
Trigger: AGCCCTCAGCGGCCCCAGCGGCACCTCCACGAAGCTCACGGTCCAGGTGTGCCTACGCTTCTGCCGCATGAAGGGGTACCAGCTGTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571007.5
ENST00000575885.5
CDS-3UTR CAA 90 bp GAGGCCGAGCTGCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCAGCTGCTGTAGCTGTGTaGCTGCGTCTGGTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: EAELPLHRRKAEAGRSTAAAVAV*LRLVPE
Trigger: TTCTGGGACCAGACGCAGCAACACAGCTACAGCAGC...TGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGCAGCTCGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp CCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATGGGTTACGGCAGAAGTaGTGCGCGCCCAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: PTQAQGRGRAQHSISGVHGLRQK*CAPSPQ
Trigger: CTGGGGGCTGGGCGCGCACAACTTCTGCCGTAACCC...ATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp AGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGGCGGCGGTTTCCTGTCCGACTTTaGGTCTCCCCAAGGCGACCA +
Preference number: 5 (lower is better)
Translates to: RPRQGAAQHLRCPSRRRRFPVRL*VSPRRP
Trigger: TGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAA...CCGCCGCCGGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp CAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCCATCTCGCCGCTGCTGTAGCTGTGTaGCTGCGTCTGGTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: QAQGRGRAQHSISGVHLAAAVAV*LRLVPE
Trigger: TTCTGGGACCAGACGCAGCAACACAGCTACAGCAGC...GGCGAGATGGACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp GAGGGCCTGGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCAGGGTTACGGCAGAAGTaGTGCGCGCCCAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: EGLDHLDPHGQAKSQIIAGLRQK*CAPSPQ
Trigger: CTGGGGGCTGGGCGCGCACAACTTCTGCCGTAACCC...TGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCCAGGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp CCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTGGTGAGCGCGAAGCCTaGCGCGTGGCCGCGCGCGTC +
Preference number: 5 (lower is better)
Translates to: PHGQAKSQIIAPDVSCPTGEREA*RVAARV
Trigger: GACGCGCGCGGCCACGCGCAAGGCTTCGCGCTCACC...AGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp GGGGGCCCTTTTCCCGGAGCCAGCAGACAGCTCCTAGAGAGGGAGCAGACATCACACCCCTCGGGGCTGTaGGTACCACACAGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GGPFPGASRQLLEREQTSHPSGL*VPHSPA
Trigger: AGCTGGGCTGTGTGGTACCAACAGCCCCGAGGGGTG...TGATGTCTGCTCCCTCTCTAGGAGCTGTCTGCTGGCTCCGGGAAAAGGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000572045.5
ENST00000575769.1
CDS-3UTR CAA 90 bp GCCCCTACACAGGCGCAAGGCCGAGGCAGGGCGCAGCACAGCATCTCAGGTGTCTTTCCTGTCCGACTTTaGGTCTCCCCAAGGCGACCA +
Preference number: 5 (lower is better)
Translates to: APTQAQGRGRAQHSISGVFPVRL*VSPRRP
Trigger: TGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAA...GACACCTGAGATGCTGTGCTGCGCCCTGCCTCGGCCTTGCGCCTGTGTAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS GCA 90 bp AGCCTGGCATGTGACAGGAGGGGATGTCGCAGTAGCGCCAGTAGATaGCCTCCTCTGTCTCAGCCACGTAGCACCACGGCTGCACGTCAC +
Preference number: 5 (lower is better)
Translates to: SLACDRRGCRSSASR*PPLSQPRSTTAARH
Trigger: GTGACGTGCAGCCGTGGTGCTACGTGGCTGAGACAGAGGAGGGCATCTACTGGCGCTACTGCGACATCCCCTCCTGTCACATGCCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp GGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCCTCTCCTGGGGGTCTTaGCCTCCCAGGGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GPPRSGQVPDNSTRCFLSLSWGS*PPRASA
Trigger: GGCAGAGGCCCTGGGAGGCAAAGACCCCCAGGAGAG...GGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR CAA 90 bp CCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTGGGCTGCAGCTCACGTaGGCCCCGTCGAGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: PRSGQVPDNSTRCFLSDFGLQLT*APSRGA
Trigger: GGCGCCCCTCGACGGGGCCAACGTGAGCTGCAGCCC...AAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp CCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTCTCCTGGGGGTCTTaGCCTCCCAGGGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PSGPPRSGQVPDNSTRCFLSWGS*PPRASA
Trigger: GGCAGAGGCCCTGGGAGGCAAAGACCCCCAGGAGAG...GAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR CAA 90 bp GTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGCTCTCCTGGGGGTCTTaGCCTCCCAGGGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VQRPPKPETTPTYRSMERLSWGS*PPRASA
Trigger: GGCAGAGGCCCTGGGAGGCAAAGACCCCCAGGAGAG...CCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR CAA 90 bp GTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGGGTTACGGCAGAAGTaGTGCGCGCCCAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: VQRPPKPETTPTYRSMERGLRQK*CAPSPQ
Trigger: CTGGGGGCTGGGCGCGCACAACTTCTGCCGTAACCC...CCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp AGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGGGTTACGGCAGAAGTaGTGCGCGCCCAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: RGSKTSETRDHPHIQVHGGLRQK*CAPSPQ
Trigger: CTGGGGGCTGGGCGCGCACAACTTCTGCCGTAACCC...TCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp CAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCGGGCTGCAGCTCACGTaGGCCCCGTCGAGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: QAKSQIIAPDVSCPTFGLGLQLT*APSRGA
Trigger: GGCGCCCCTCGACGGGGCCAACGTGAGCTGCAGCCC...GAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp GGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCCACCCCTCGGGGCTGTaGGTACCACACAGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GPPRSGQVPDNSTRCFLSHPSGL*VPHSPA
Trigger: AGCTGGGCTGTGTGGTACCAACAGCCCCGAGGGGTG...GGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp AGAGGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGCACCCCTCGGGGCTGTaGGTACCACACAGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: RGVQRPPKPETTPTYRSMHPSGL*VPHSPA
Trigger: AGCTGGGCTGTGTGGTACCAACAGCCCCGAGGGGTG...CATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp CTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGAGGGCCTGGACCATTTCCTGTCCGACTTTaGGTCTCCCCAAGGCGACCA +
Preference number: 5 (lower is better)
Translates to: LRNQRPPPHTGPWRGPGPFPVRL*VSPRRP
Trigger: TGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAA...TGGTCCAGGCCCTCTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp GGACCATCTGGACCCCCACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTGCTGCTGTAGCTGTGTaGCTGCGTCTGGTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: GPSGPPRSGQVPDNSTRCAAVAV*LRLVPE
Trigger: TTCTGGGACCAGACGCAGCAACACAGCTACAGCAGC...ACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTGGGGGTCCAGATGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp GGGGTTCAAAGACCTCCGAAACCAGAGACCACCCCCACATACAGGTCCATGGAGGCTGCTGTAGCTGTGTaGCTGCGTCTGGTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: GVQRPPKPETTPTYRSMEAAVAV*LRLVPE
Trigger: TTCTGGGACCAGACGCAGCAACACAGCTACAGCAGC...CTCCATGGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp ATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGACCAGACACCCCTCGGGGCTGTaGGTACCACACAGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: IIAPDVSCPTFGLPKATRHPSGL*VPHSPA
Trigger: AGCTGGGCTGTGTGGTACCAACAGCCCCGAGGGGTG...TCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp CACGGTCAGGCCAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGAAGCCCTGCAGGGCTaGTGTCCCCATCGCTCTCAA +
Preference number: 5 (lower is better)
Translates to: HGQAKSQIIAPDVSCPTFEALQG*CPHRSQ
Trigger: TTGAGAGCGATGGGGACACAAGCCCTGCAGGGCTTC...AAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTGGCCTGACCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS-3UTR CAA 90 bp AATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCGACCAGAGGTTTCCTGTCCGACTTTaGGTCTCCCCAAGGCGACCA +
Preference number: 5 (lower is better)
Translates to: NSTRCFLSDFWSPQGDQRFPVRL*VSPRRP
Trigger: TGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAA...CCTCTGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp GTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGGCTTTCCTGTCCGACTTTaGGTCTCCCCAAGGCGACCA +
Preference number: 5 (lower is better)
Translates to: VPDNSTRCFLSDFWSPQGFPVRL*VSPRRP
Trigger: TGGTCGCCTTGGGGAGACCAAAAGTCGGACAGGAAA...GCCTTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS-3UTR CAA 90 bp CAAGTCCCAGATAATAGCACCAGATGTTTCCTGTCCGACTTTTGGTCTCCCCAAGCTGCTGTAGCTGTGTaGCTGCGTCTGGTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: QVPDNSTRCFLSDFWSPQAAVAV*LRLVPE
Trigger: TTCTGGGACCAGACGCAGCAACACAGCTACAGCAGC...TTGGGGAGACCAAAAGTCGGACAGGAAACATCTGGTGCTATTATCTGGGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS GCA 72 bp GCGGTGGGCGGGCGCCATCGAAGGCGCGGAGCAGGCTaGCCGAAGCCGCGTCGCGCAGCTCCAGCCGGTCGC +
Preference number: 6 (lower is better)
Translates to: AVGGRHRRRGAG*PKPRRAAPAGR
Trigger: GCGACCGGCTGGAGCTGCGCGACGCGGCTTCGGGCAGCCTGCTCCGCGCCTTCGATGGCGCCCGCCCACCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS CCA 72 bp CGCCGCGGGGGTCTGGGCCGAGCCCTCGGGGGCCTCTaGGTCCTCAGCGGCGTCCTGCAGCCCGCGGTAGGT +
Preference number: 6 (lower is better)
Translates to: RRGGLGRALGGL*VLSGVLQPAVG
Trigger: ACCTACCGCGGGCTGCAGGACGCCGCTGAGGACCCAGAGGCCCCCGAGGGCTCGGCCCAGACCCCCGCGGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS TCA 72 bp AGCCTTGCGCGTGGCCGCGCGCGTCGCTTCGGAAGGTaGGCAGCAGCGCGGCAGTGCCCAGGCGCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: SLARGRARRFGR*AAARQCPGAAA
Trigger: GGCCGCTGCGCCTGGGCACTGCCGCGCTGCTGCTCACCTTCCGAAGCGACGCGCGCGGCCACGCGCAAGGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS TCA 72 bp GTCGAGAAGACCCGGGCTGCGGGCACACGGCTGCGGTaGGGATGGGCGCGAGGGGGCGGCTCCCTGACTCAC +
Preference number: 6 (lower is better)
Translates to: VEKTRAAGTRLR*GWARGGGSLTH
Trigger: GTGAGTCAGGGAGCCGCCCCCTCGCGCCCATCCTCACCGCAGCCGTGTGCCCGCAGCCCGGGTCTTCTCGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572045.5
CDS GCA 72 bp AGAAGAGGCACGGGCGGCCCGCCCCGCGCGGGCCAGTaGGGTTCTGGTGGCCGCGGTAGTCAGCCCCATTCA +
Preference number: 6 (lower is better)
Translates to: RRGTGGPPRAGQ*GSGGRGSQPHS
Trigger: TGAATGGGGCTGACTACCGCGGCCACCAGAACCGCACTGGCCCGCGCGGGGCGGGCCGCCCGTGCCTCTTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS CCA 72 bp TGTGCGCGCCCAGCCCCCAGCGGCCGTGGGGGTCGCTaGCGCTGCTGTAGCTGTGTTGCTGCGTCTGGTCCC +
Preference number: 6 (lower is better)
Translates to: CARPAPSGRGGR*RCCSCVAASGP
Trigger: GGGACCAGACGCAGCAACACAGCTACAGCAGCGCCAGCGACCCCCACGGCCGCTGGGGGCTGGGCGCGCACA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS CAA 72 bp GGCGTCCTGCAGCCCGCGGTAGGTGAGCGCGAAGCCTaGCGCGTGGCCGCGCGCGTCGCTTCGGAAGGTGAG +
Preference number: 6 (lower is better)
Translates to: GVLQPAVGEREA*RVAARVASEGE
Trigger: CTCACCTTCCGAAGCGACGCGCGCGGCCACGCGCAAGGCTTCGCGCTCACCTACCGCGGGCTGCAGGACGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS GCA 72 bp CACCGAGACAGCCGTCACCGTCGAGAAGACCCGGGCTaGGGGCACACGGCTGCGGTGAGGATGGGCGCGAGG +
Preference number: 6 (lower is better)
Translates to: HRDSRHRREDPG*GHTAAVRMGAR
Trigger: CCTCGCGCCCATCCTCACCGCAGCCGTGTGCCCGCAGCCCGGGTCTTCTCGACGGTGACGGCTGTCTCGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572045.5
CDS TCA 72 bp CCGGCCCGTACTCGTCCGGGAAGTCCGGGGAGTAGATaGCGCCCTGAGGCGCTGTCCAGTTCCCCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: PARTRPGSPGSR*RPEALSSSPGR
Trigger: CCTGCCAGGGGAACTGGACAGCGCCTCAGGGCGTCATCTACTCCCCGGACTTCCCGGACGAGTACGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS CCA 72 bp GTCCAGGGTGGCCGAAACAGATCTGGTCACAGTCGGTaGCGGGGGCCAGGCGTCCCCGGGCCAGGTCGCTTT +
Preference number: 6 (lower is better)
Translates to: VQGGRNRSGHSR*RGPGVPGPGRF
Trigger: AAAGCGACCTGGCCCGGGGACGCCTGGCCCCCGCCACCGACTGTGACCAGATCTGTTTCGGCCACCCTGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000572045.5
ENST00000575769.1
CDS CCA 72 bp TGGTACCCCTTCATGCGGCAGAAGCGTAGGCACACCTaGACCGTGAGCTTCGTGGAGGTGCCGCTGGGGCCG +
Preference number: 6 (lower is better)
Translates to: WYPFMRQKRRHT*TVSFVEVPLGP
Trigger: CGGCCCCAGCGGCACCTCCACGAAGCTCACGGTCCAGGTGTGCCTACGCTTCTGCCGCATGAAGGGGTACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5
CDS CCA 72 bp CCTCGTCCGACTCTGAGCCGCGCTTTCCGTCTGGGGTaGGTAAATCTCTCCTGGGGGTCTTTGCCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: PRPTLSRAFRLG*VNLSWGSLPPR
Trigger: CCTGGGAGGCAAAGACCCCCAGGAGAGATTTACCCACCCCAGACGGAAAGCGCGGCTCAGAGTCGGACGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575885.5
CDS GCA 72 bp TGTGACAGGAGGGGATGTCGCAGTAGCGCCAGTAGATaGCCTCCTCTGTCTCAGCCACGTAGCACCACGGCT +
Preference number: 6 (lower is better)
Translates to: CDRRGCRSSASR*PPLSQPRSTTA
Trigger: AGCCGTGGTGCTACGTGGCTGAGACAGAGGAGGGCATCTACTGGCGCTACTGCGACATCCCCTCCTGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303746.10
ENST00000319500.10
ENST00000571007.5
ENST00000572045.5
ENST00000575769.1
ENST00000575885.5