RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KPNA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000114030

Ensembl transcript IDs: ENST00000344337.11, ENST00000465882.5, ENST00000466923.5, ENST00000470904.5, ENST00000476916.5, ENST00000482287.5, ENST00000485027.5, ENST00000493510.1, ENST00000494339.5

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGTTGCCAAGTCTAGTTCTGGGAGATCCTGGGCACGGAACTACTaGGTGGCCACTGCTTTCTTCAAGACACAGAATTTGCAGGGCTCT +
Preference number: 1 (lower is better)
Translates to: VVAKSSSGRSWARNY*VATAFFKTQNLQGS
Trigger: AGAGCCCTGCAAATTCTGTGTCTTGAAGAAAGCAGTGGCCACGCAGTAGTTCCGTGCCCAGGATCTCCCAGAACTAGACTTGGCAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR CCA 90 bp TTGCCAAGTCTAGTTCTGGGAGATCCTGGGCACGGAACTACTGCGTaGCCACTGCTTTCTTCAAGACACAGAATTTGCAGGGCTCTTCCC +
Preference number: 1 (lower is better)
Translates to: LPSLVLGDPGHGTTA*PLLSSRHRICRALP
Trigger: GGGAAGAGCCCTGCAAATTCTGTGTCTTGAAGAAAGCAGTGGCCACGCAGTAGTTCCGTGCCCAGGATCTCCCAGAACTAGACTTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR GCA 90 bp ACACTGTTGGAAGATGTACTGCTGCTGGTTAAGGTCAACCTGGGGTaGAATGCTGCTGTCTTCATCTTCGGTCCCGAAGTAATGCTCAAT +
Preference number: 1 (lower is better)
Translates to: TLLEDVLLLVKVNLG*NAAVFIFGPEVMLN
Trigger: ATTGAGCATTACTTCGGGACCGAAGATGAAGACAGCAGCATTGCACCCCAGGTTGACCTTAACCAGCAGCAGTACATCTTCCAACAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR CCA 90 bp GTATTGCTTCAAAGCTGGAAACCTTCCATAGGAGCCTCACACTGTTaGAAGATGTACTGCTGCTGGTTAAGGTCAACCTGGGGTGCAATG +
Preference number: 1 (lower is better)
Translates to: VLLQSWKPSIGASHC*KMYCCWLRSTWGAM
Trigger: CATTGCACCCCAGGTTGACCTTAACCAGCAGCAGTACATCTTCCAACAGTGTGAGGCTCCTATGGAAGGTTTCCAGCTTTGAAGCAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485027.5
3UTR TCA 90 bp GCGCAAGGCAAGCAAATGAGCGCAAACAGTATTATGGAAAACATTTaGGAAGTTAGCTCCATGAGGACTGTGGGCTCCACAAGAGGACTC +
Preference number: 1 (lower is better)
Translates to: AQGKQMSANSIMENI*EVSSMRTVGSTRGL
Trigger: GAGTCCTCTTGTGGAGCCCACAGTCCTCATGGAGCTAACTTCTCAAATGTTTTCCATAATACTGTTTGCGCTCATTTGCTTGCCTTGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR GCA 90 bp TCAGACGGTATCCATCCCAGAGCACAGACACTACTACAGACTAGATaGGAAGAATGCGTCACACTCTTGGCTGATAAATGTCCTTTGTCT +
Preference number: 1 (lower is better)
Translates to: SDGIHPRAQTLLQTR*EECVTLLADKCPLS
Trigger: AGACAAAGGACATTTATCAGCCAAGAGTGTGACGCATTCTTCGCATCTAGTCTGTAGTAGTGTCTGTGCTCTGGGATGGATACCGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR GCA 90 bp CAAGCACAAATGTGGATCACTGAACACAGTACTGGAAGCGCCATTTaGAGGTACAGATTGCAGTCATCATTAAATGAGCCAGAAGGCAGA +
Preference number: 1 (lower is better)
Translates to: QAQMWITEHSTGSAI*RYRLQSSLNEPEGR
Trigger: TCTGCCTTCTGGCTCATTTAATGATGACTGCAATCTGTACCTGCAAATGGCGCTTCCAGTACTGTGTTCAGTGATCCACATTTGTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR TCA 90 bp CACTCACTGAAACATCTCCAACTACTAGCAAAAATTCCGAATGTCTaGATGCACACTACTCTTCCTAATGTGGGGAGACAACTGTGTGCT +
Preference number: 1 (lower is better)
Translates to: HSLKHLQLLAKIPNV*MHTTLPNVGRQLCA
Trigger: AGCACACAGTTGTCTCCCCACATTAGGAAGAGTAGTGTGCATTCAGACATTCGGAATTTTTGCTAGTAGTTGGAGATGTTTCAGTGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR GCA 90 bp TATCATCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTaGTGGTCCATCAGATACCAGATGCCTTTACATCCAAAATTCTCT +
Preference number: 1 (lower is better)
Translates to: YHLPYPKFLNPTTST*WSIRYQMPLHPKFS
Trigger: AGAGAATTTTGGATGTAAAGGCATCTGGTATCTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGATGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR TCA 90 bp TCTAAGTGTCAGAACACTTTGAAGCAGGATGTAGAGTGGTCAGAATaGCTTGAGGTAAAGCAGAAACACTCAACAACCAGTACATTAAAA +
Preference number: 1 (lower is better)
Translates to: SKCQNTLKQDVEWSE*LEVKQKHSTTSTLK
Trigger: TTTTAATGTACTGGTTGTTGAGTGTTTCTGCTTTACCTCAAGTCATTCTGACCACTCTACATCCTGCTTCAAAGTGTTCTGACACTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR GCA 90 bp AGAGAAGCAAAAGCGATACAAATTAATATGTGCCCCTCTCCTTTCTaGTCTAAGGGAATCTACAAACCAGTATCACATTTAGGAGTCAAA +
Preference number: 1 (lower is better)
Translates to: REAKAIQINMCPSPF*SKGIYKPVSHLGVK
Trigger: TTTGACTCCTAAATGTGATACTGGTTTGTAGATTCCCTTAGAGCAGAAAGGAGAGGGGCACATATTAATTTGTATCGCTTTTGCTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR CCA 90 bp AGCCTTTCCTTCCGTGTCAATACTTTCCACATTTGTGCGTTTGAATaGATCCATGTGTTTAGCCATTATTTTACTAAACACAAAATCATT +
Preference number: 1 (lower is better)
Translates to: SLSFRVNTFHICAFE*IHVFSHYFTKHKII
Trigger: AATGATTTTGTGTTTAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAGTATTGACACGGAAGGAAAGGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGAACATTGAGTCAAGATaGCCAACTAGCACCGAGAAG +
Preference number: 2 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGNIESR*PTSTEK
Trigger: CTTCTCGGTGCTAGTTGGCCATCTTGACTCAATGTT...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR GCA 90 bp GAGGGGGAAGGATATTGCAGTCTAAGACATAGTCCCTGCACATGGTACTATCTCGCCAAGAGCCCAGACTaGCTGTTCCTGGACATCTTC +
Preference number: 2 (lower is better)
Translates to: EGEGYCSLRHSPCTWYYLAKSPD*LFLDIF
Trigger: GAAGATGTCCAGGAACAGGCAGTCTGGGCTCTTGGC...GAGATAGTACCATGTGCAGGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR GCA 90 bp AGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACAGACAAAGCCCATACTaGATTCCGGGTCATGGTCAG +
Preference number: 2 (lower is better)
Translates to: RVHDREEITERLDTTQFYRQSPY*IPGHGQ
Trigger: CTGACCATGACCCGGAATGCAGTATGGGCTTTGTCT...GTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR TCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGCATGTTACCTTAATTTaGCCTACAGGGAAAACACTC +
Preference number: 2 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGHVTLI*PTGKTL
Trigger: GAGTGTTTTCCCTGTAGGTCAAATTAAGGTAACATG...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR GCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGCCTAGTTACACTGATTaGATTTGGGAAAATTGGAGG +
Preference number: 2 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGPSYTD*IWENWR
Trigger: CCTCCAATTTTCCCAAATGCAATCAGTGTAACTAGG...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR GCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGAAAGTATGTGTTATCTaGCAGTCACAGAGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGKVCVI*QSQRGK
Trigger: TTTTCCCCTCTGTGACTGGCAGATAACACATACTTT...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR GCA 90 bp AAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCATGACCGTGAGGAGATCAGCCAAGAGCCCAGACTaGCTGTTCCTGGACATCTTC +
Preference number: 2 (lower is better)
Translates to: KPFRATCTILESMTVRRSAKSPD*LFLDIF
Trigger: GAAGATGTCCAGGAACAGGCAGTCTGGGCTCTTGGC...TGATCTCCTCACGGTCATGGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR CCA 90 bp AGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACCAGACTGCCTGTTCCTaGACATCTTCAAACTCTGAG +
Preference number: 2 (lower is better)
Translates to: RVHDREEITERLDTTQFYQTACS*TSSNSE
Trigger: CTCAGAGTTTGAAGATGTCCAGGAACAGGCAGTCTG...GTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR TCA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGCTGGGTAGCCTGGTCTaGCACAGGTACGTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: STLPKISQSNHIYLLVHQLGSLV*HRYVKA
Trigger: TGCTTTCACGTACCTGTGTCAGACCAGGCTACCCAG...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR TCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGCTTTATCAGATATTCTaGTGTCCTGGTATCCATTGT +
Preference number: 2 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGLYQIF*CPGIHC
Trigger: ACAATGGATACCAGGACATCAGAATATCTGATAAAG...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR TCA 90 bp AGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACCTTGATCTGTTCAGCTaGTCCTCCAGAAGTTGCATT +
Preference number: 2 (lower is better)
Translates to: RVHDREEITERLDTTQFYLDLFS*SSRSCI
Trigger: AATGCAACTTCTGGAGGATCAGCTGAACAGATCAAG...GTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR GCA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCAGATGGGCACAGCTCCTaGCTGAATCACAATTCGGGT +
Preference number: 2 (lower is better)
Translates to: QPSSTRYLICSADPPEVADGHSS*LNHNSG
Trigger: ACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATC...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR CAA 90 bp ACTGCTTTCTTCAAGACACAGAATTTGCAGGGCTCTTCCCCGCCCTaGGACAGCCATCTAAGTGTTGTAACCTTGGGGCAAAGTAATTTC +
Preference number: 2 (lower is better)
Translates to: TAFFKTQNLQGSSPP*DSHLSVVTLGQSNF
Trigger: GAAATTACTTTGCCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAAATTCTGTGTCTTGAAGAAAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR CAA 90 bp AGTATTGCTTCAAAGCTGGAAACCTTCCATAGGAGCCTCACACTGTaGGAAGATGTACTGCTGCTGGTTAAGGTCAACCTGGGGTGCAAT +
Preference number: 2 (lower is better)
Translates to: SIASKLETFHRSLTL*EDVLLLVKVNLGCN
Trigger: ATTGCACCCCAGGTTGACCTTAACCAGCAGCAGTACATCTTCCAACAGTGTGAGGCTCCTATGGAAGGTTTCCAGCTTTGAAGCAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485027.5
3UTR-3UTR TCA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGGAGAAGTTAGCTCCATaGGGACTGTGGGCTCCACAA +
Preference number: 2 (lower is better)
Translates to: STLPKISQSNHIYLLVHQEKLAP*GLWAPQ
Trigger: TTGTGGAGCCCACAGTCCTCATGGAGCTAACTTCTC...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR GCA 90 bp TACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCGAGGGGGAAGGATATTaGAGTCTAAGACATAGTCCC +
Preference number: 2 (lower is better)
Translates to: YNLRVHDREEITERLDTTEGEGY*SLRHSP
Trigger: GGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC...GGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR TCA 90 bp TACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCGTACATCAGTGTCACTaGCAAACAGCAACCAGGAAA +
Preference number: 2 (lower is better)
Translates to: YNLRVHDREEITERLDTTVHQCH*QTATRK
Trigger: TTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTAC...GGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR CCA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCACAGACTGCCTGTTCCTaGACATCTTCAAACTCTGAG +
Preference number: 2 (lower is better)
Translates to: QPSSTRYLICSADPPEVAQTACS*TSSNSE
Trigger: CTCAGAGTTTGAAGATGTCCAGGAACAGGCAGTCTG...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR CCA 90 bp TACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCTGCAAATTCTGGAGGTaGACTTTTCCCTCTACAGAG +
Preference number: 2 (lower is better)
Translates to: YNLRVHDREEITERLDTTCKFWR*TFPSTE
Trigger: CTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGCA...GGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR CCA 90 bp TACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCGCATCTATCACAGTCTaGATCTGTGCCCTATTTCCA +
Preference number: 2 (lower is better)
Translates to: YNLRVHDREEITERLDTTASITV*ICALFP
Trigger: TGGAAATAGGGCACAGATCCAGACTGTGATAGATGC...GGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR CAA 90 bp TGTACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTaGATACAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGAT +
Preference number: 2 (lower is better)
Translates to: CTILESMTVRRSQSG*IQPSSTRYLICSAD
Trigger: ATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR TCA 90 bp TACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCATCACAATTCGGGTCTaGAGAGAATTTCCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: YNLRVHDREEITERLDTTITIRV*REFPEA
Trigger: TGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGAT...GGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR TCA 90 bp GAGGGGGAAGGATATTGCAGTCTAAGACATAGTCCCTGCACATGGTACTATCTCGACATCTTCAAACTCTaGGCTGAGCAACTCTATGAA +
Preference number: 2 (lower is better)
Translates to: EGEGYCSLRHSPCTWYYLDIFKL*AEQLYE
Trigger: TTCATAGAGTTGCTCAGCTCAGAGTTTGAAGATGTC...GAGATAGTACCATGTGCAGGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR TCA 90 bp AGCCTCAGGATATTTTCCAAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCGATCACAGAGCGGCTTaGTACAACCCAGTTCTACTA +
Preference number: 2 (lower is better)
Translates to: SLRIFSKPFRATCTILESDHRAA*YNPVLL
Trigger: TAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATC...GGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTTGGAAAATATCCTGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR GCA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGACTGGAAGCGCCATTTaGAGGTACAGATTGCAGTCA +
Preference number: 2 (lower is better)
Translates to: STLPKISQSNHIYLLVHQTGSAI*RYRLQS
Trigger: TGACTGCAATCTGTACCTGCAAATGGCGCTTCCAGT...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CCA 90 bp CTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACAAGAGGACTCGACTaGGTAGCCTGGTCTGACACA +
Preference number: 2 (lower is better)
Translates to: LLPKSLLQYQVPTYLSYATRGLD*VAWSDT
Trigger: TGTGTCAGACCAGGCTACCCAGTCGAGTCCTCTTGT...AGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CCA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTCTGCATTCCGGGTCATaGTCAGGCGGTTTTGCTTTG +
Preference number: 2 (lower is better)
Translates to: KILMRAGKMLASITVWICLHSGS*SGGFAL
Trigger: CAAAGCAAAACCGCCTGACCATGACCCGGAATGCAG...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR TCA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCCGCAAGGCAAGCAAATaGGCGCAAACAGTATTATGG +
Preference number: 2 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTRKASK*AQTVLW
Trigger: CCATAATACTGTTTGCGCTCATTTGCTTGCCTTGCG...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR TCA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCAATCACAATTCGGGTCTaGAGAGAATTTCCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: QPSSTRYLICSADPPEVAITIRV*REFPEA
Trigger: TGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGAT...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR GCA 90 bp AAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCATGACCGTGAGGAGATCAACATGGAGAAACCTTTaGAAATTCTGGAGGTGGACT +
Preference number: 2 (lower is better)
Translates to: KPFRATCTILESMTVRRSTWRNL*KFWRWT
Trigger: AGTCCACCTCCAGAATTTGCAAAGGTTTCTCCATGT...TGATCTCCTCACGGTCATGGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR CCA 90 bp AGCCTCAGGATATTTTCCAAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCTGCAAATTCTGGAGGTaGACTTTTCCCTCTACAGAG +
Preference number: 2 (lower is better)
Translates to: SLRIFSKPFRATCTILESCKFWR*TFPSTE
Trigger: CTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGCA...GGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTTGGAAAATATCCTGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR GCA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTGAGGGGGAAGGATATTaGAGTCTAAGACATAGTCCC +
Preference number: 2 (lower is better)
Translates to: KILMRAGKMLASITVWICEGEGY*SLRHSP
Trigger: GGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR CCA 90 bp TACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCTTTGATAGATTCCTTTaGGCTACTCAGCAAATGCAA +
Preference number: 2 (lower is better)
Translates to: YNLRVHDREEITERLDTTFDRFL*ATQQMQ
Trigger: TTGCATTTGCTGAGTAGCCCAAAGGAATCTATCAAA...GGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR CAA 90 bp TGGATCACTGAACACAGTACTGGAAGCGCCATTTGCAGGTACAGATaGCAGTCATCATTAAATGAGCCAGAAGGCAGATACTGTTTTTAT +
Preference number: 2 (lower is better)
Translates to: WITEHSTGSAICRYR*QSSLNEPEGRYCFY
Trigger: ATAAAAACAGTATCTGCCTTCTGGCTCATTTAATGATGACTGCAATCTGTACCTGCAAATGGCGCTTCCAGTACTGTGTTCAGTGATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR TCA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGATTCTTCAGCATTCCTaGCAACTAGAAAGCACATTC +
Preference number: 2 (lower is better)
Translates to: STLPKISQSNHIYLLVHQILQHS*QLESTF
Trigger: GAATGTGCTTTCTAGTTGTCAGGAATGCTGAAGAAT...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR TCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTAGAAAGATGTTTGGCCTaGGAGGGCCTACACTCCAGT +
Preference number: 2 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLERCLA*EGLHSS
Trigger: ACTGGAGTGTAGGCCCTCTCAGGCCAAACATCTTTC...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR TCA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTGTACATCAGTGTCACTaGCAAACAGCAACCAGGAAA +
Preference number: 2 (lower is better)
Translates to: KILMRAGKMLASITVWICVHQCH*QTATRK
Trigger: TTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTAC...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR TCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTAAGAAAGCACATTCACTaGAGGCTGAAGGTGAGGGAG +
Preference number: 2 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLRKHIH*RLKVRE
Trigger: CTCCCTCACCTTCAGCCTTCAGTGAATGTGCTTTCT...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR TCA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGCAGGACCACAAAGCCTaGAACATTTATTTTAATGCA +
Preference number: 2 (lower is better)
Translates to: STLPKISQSNHIYLLVHQQDHKA*NIYFNA
Trigger: TGCATTAAAATAAATGTTTCAGGCTTTGTGGTCCTG...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR TCA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTACAAATGTGGATCACTaGACACAGTACTGGAAGCGC +
Preference number: 2 (lower is better)
Translates to: NVISVTKKPASVPSSNISTNVDH*TQYWKR
Trigger: GCGCTTCCAGTACTGTGTTCAGTGATCCACATTTGT...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR TCA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTCTGAAGAGAATTTCCTaGAGCAATATTTGTCAGTAC +
Preference number: 2 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTLKRIS*SNICQY
Trigger: GTACTGACAAATATTGCTTCAGGAAATTCTCTTCAG...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR GCA 90 bp AGCCTCAGGATATTTTCCAAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCATGGTCAGGCGGTTTTaGTTTGAAAATAACTGCAAA +
Preference number: 2 (lower is better)
Translates to: SLRIFSKPFRATCTILESMVRRF*FENNCK
Trigger: TTTGCAGTTATTTTCAAAGCAAAACCGCCTGACCAT...GGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTTGGAAAATATCCTGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR GCA 90 bp TACATCAGTGTCACTGACAAACAGCAACCAGGAAAGCACATTCAGACATGGAGAATGGTCAGGCGGTTTTaGTTTGAAAATAACTGCAAA +
Preference number: 2 (lower is better)
Translates to: YISVTDKQQPGKHIQTWRMVRRF*FENNCK
Trigger: TTTGCAGTTATTTTCAAAGCAAAACCGCCTGACCAT...TCTCCATGTCTGAATGTGCTTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR GCA 90 bp AGCCTCAGGATATTTTCCAAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCAAATGCAATAAACTCTaGAGAGCTGAGCAATTCAGA +
Preference number: 2 (lower is better)
Translates to: SLRIFSKPFRATCTILESKCNKL*RAEQFR
Trigger: TCTGAATTGCTCAGCTCTGCAGAGTTTATTGCATTT...GGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTTGGAAAATATCCTGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR CCA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGTTCCGTAAAAGAGAGTaGGCCGTTCTGGTTACCCTT +
Preference number: 2 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKFRKRE*AVLVTL
Trigger: AAGGGTAACCAGAACGGCCCACTCTCTTTTACGGAA...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CCA 90 bp GACTCAGAGCCAATAACCTTCATCTGTCATATGGAAGAAACAATCCTAGGGCAAAATGCGTCACACTCTTaGCTGATAAATGTCCTTTGT +
Preference number: 2 (lower is better)
Translates to: DSEPITFICHMEETILGQNASHS*LINVLC
Trigger: ACAAAGGACATTTATCAGCCAAGAGTGTGACGCATT...TTGCCCTAGGATTGTTTCTTCCATATGACAGATGAAGGTTATTGGCTCTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR TCA 90 bp CTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTCATCATGATGAGGTATaGAAAGCTCTGAATATCCCT +
Preference number: 2 (lower is better)
Translates to: LLPKSLLQYQVPTYLSYAHHDEV*KALNIP
Trigger: AGGGATATTCAGAGCTTTTCATACCTCATCATGATG...AGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR GCA 90 bp GACTCAGAGCCAATAACCTTCATCTGTCATATGGAAGAAACAATCCTAGGGCAAATACAAATTAATATGTaGCCCTCTCCTTTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: DSEPITFICHMEETILGQIQINM*PSPFCS
Trigger: AGAGCAGAAAGGAGAGGGGCACATATTAATTTGTAT...TTGCCCTAGGATTGTTTCTTCCATATGACAGATGAAGGTTATTGGCTCTGAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR GCA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTCTACTACAGACTAGATaGGAAGAATGCGTCACACTC +
Preference number: 2 (lower is better)
Translates to: NVISVTKKPASVPSSNISLLQTR*EECVTL
Trigger: GAGTGTGACGCATTCTTCGCATCTAGTCTGTAGTAG...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR GCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTAGGGGAGACAACTGTGTaGTTTGTATCTTTCCCACTC +
Preference number: 2 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLGETTV*FVSFPL
Trigger: GAGTGGGAAAGATACAAAGCACACAGTTGTCTCCCC...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR GCA 90 bp CTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTTTCCGAATGTCTGAATaGACACTACTCTTCCTAATG +
Preference number: 2 (lower is better)
Translates to: LLPKSLLQYQVPTYLSYAFRMSE*TLLFLM
Trigger: CATTAGGAAGAGTAGTGTGCATTCAGACATTCGGAA...AGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR GCA 90 bp AGCCTCAGGATATTTTCCAAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCAGATATCGTCCAACATaGTTCCTTTTTGATAGATTC +
Preference number: 2 (lower is better)
Translates to: SLRIFSKPFRATCTILESRYRPT*FLFDRF
Trigger: GAATCTATCAAAAAGGAAGCATGTTGGACGATATCT...GGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTTGGAAAATATCCTGAGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR CCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTACTACTCTTCCTAATGTaGGGAGACAACTGTGTGCTT +
Preference number: 2 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLLLFLM*GDNCVL
Trigger: AAGCACACAGTTGTCTCCCCACATTAGGAAGAGTAG...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CCA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTTTTGATAGATTCCTTTaGGCTACTCAGCAAATGCAA +
Preference number: 2 (lower is better)
Translates to: KILMRAGKMLASITVWICFDRFL*ATQQMQ
Trigger: TTGCATTTGCTGAGTAGCCCAAAGGAATCTATCAAA...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR GCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTAAGGTTTAAAAGGGTATaGTCTGAAACAGAGGTGAGC +
Preference number: 2 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLRFKRV*SETEVS
Trigger: GCTCACCTCTGTTTCAGAGCATACCCTTTTAAACCT...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR GCA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTAGATATCGTCCAACATaGTTCCTTTTTGATAGATTC +
Preference number: 2 (lower is better)
Translates to: KILMRAGKMLASITVWICRYRPT*FLFDRF
Trigger: GAATCTATCAAAAAGGAAGCATGTTGGACGATATCT...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR TCA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGATTATGGAAAACATTTaGGAAGTTAGCTCCATGAGG +
Preference number: 2 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKIMENI*EVSSMR
Trigger: CCTCATGGAGCTAACTTCTCAAATGTTTTCCATAAT...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CCA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTAGTAACAGTTATAGATaGGAGTTGACTAGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: NVISVTKKPASVPSSNISSNSYR*ELTSFA
Trigger: TGCAAAACTAGTCAACTCCCATCTATAACTGTTACT...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR CCA 72 bp CCAGCTGTGGTTGCCAAGTCTAGTTCTGGGAGATCCTaGGCACGGAACTACTGCGTGGCCACTGCTTTCTTC +
Preference number: 3 (lower is better)
Translates to: PAVVAKSSSGRS*ARNYCVATAFF
Trigger: GAAGAAAGCAGTGGCCACGCAGTAGTTCCGTGCCCAGGATCTCCCAGAACTAGACTTGGCAACCACAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CAA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGTACTGGAAGCGCCATTaGCAGGTACAGATTGCAGTC +
Preference number: 3 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGYWKRH*QVQIAV
Trigger: GACTGCAATCTGTACCTGCAAATGGCGCTTCCAGTA...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR GCA 72 bp TGGGAGATCCTGGGCACGGAACTACTGCGTGGCCACTaGTTTCTTCAAGACACAGAATTTGCAGGGCTCTTC +
Preference number: 3 (lower is better)
Translates to: WEILGTELLRGH*FLQDTEFAGLF
Trigger: GAAGAGCCCTGCAAATTCTGTGTCTTGAAGAAAGCAGTGGCCACGCAGTAGTTCCGTGCCCAGGATCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR TCA 72 bp GGGCCCAGCAGGCATCAGCCAGTACATCAGTGTCACTaGCAAACAGCAACCAGGAAAGCACATTCAGACATG +
Preference number: 3 (lower is better)
Translates to: GPSRHQPVHQCH*QTATRKAHSDM
Trigger: CATGTCTGAATGTGCTTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTACTGGCTGATGCCTGCTGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR CCA 72 bp TGTTGGAAGATGTACTGCTGCTGGTTAAGGTCAACCTaGGGTGCAATGCTGCTGTCTTCATCTTCGGTCCCG +
Preference number: 3 (lower is better)
Translates to: CWKMYCCWLRST*GAMLLSSSSVP
Trigger: CGGGACCGAAGATGAAGACAGCAGCATTGCACCCCAGGTTGACCTTAACCAGCAGCAGTACATCTTCCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR CAA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGTTTTTAATGAGGACCTaGATCAGGACCACAAAGCCT +
Preference number: 3 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGFLMRT*IRTTKP
Trigger: AGGCTTTGTGGTCCTGATCAAGGTCCTCATTAAAAA...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR GCA 72 bp GAAGATGTACTGCTGCTGGTTAAGGTCAACCTGGGGTaGAATGCTGCTGTCTTCATCTTCGGTCCCGAAGTA +
Preference number: 3 (lower is better)
Translates to: EDVLLLVKVNLG*NAAVFIFGPEV
Trigger: TACTTCGGGACCGAAGATGAAGACAGCAGCATTGCACCCCAGGTTGACCTTAACCAGCAGCAGTACATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR GCA 72 bp AAGTCTAGTTCTGGGAGATCCTGGGCACGGAACTACTaGGTGGCCACTGCTTTCTTCAAGACACAGAATTTG +
Preference number: 3 (lower is better)
Translates to: KSSSGRSWARNY*VATAFFKTQNL
Trigger: CAAATTCTGTGTCTTGAAGAAAGCAGTGGCCACGCAGTAGTTCCGTGCCCAGGATCTCCCAGAACTAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CAA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGACATGTTACCTTAATTaGACCTACAGGGAAAACACT +
Preference number: 3 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGTCYLN*TYRENT
Trigger: AGTGTTTTCCCTGTAGGTCAAATTAAGGTAACATGT...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CAA 90 bp TACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCAGGGCTGGGAAAATGTaGGCATCTATCACAGTCTGG +
Preference number: 3 (lower is better)
Translates to: YNLRVHDREEITERLDTTRAGKM*ASITVW
Trigger: CCAGACTGTGATAGATGCCAACATTTTCCCAGCCCT...GGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR GCA 72 bp GAGGGGGAAGGATATTGCAGTCTAAGACATAGTCCCTaGACATGGTACTATCTCCAGCAATGTTGCCAAGAG +
Preference number: 3 (lower is better)
Translates to: EGEGYCSLRHSP*TWYYLQQCCQE
Trigger: CTCTTGGCAACATTGCTGGAGATAGTACCATGTGCAGGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR CAA 90 bp TACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCAGTTCTACTAGGTACTaGATCTGTTCAGCTGATCCT +
Preference number: 3 (lower is better)
Translates to: YNLRVHDREEITERLDTTSSTRY*ICSADP
Trigger: AGGATCAGCTGAACAGATCAAGTACCTAGTAGAACT...GGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR CAA 90 bp TACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCCAACATGCTTCCTTTTaGATAGATTCCTTTGGGCTA +
Preference number: 3 (lower is better)
Translates to: YNLRVHDREEITERLDTTQHASF*IDSFGL
Trigger: TAGCCCAAAGGAATCTATCAAAAAGGAAGCATGTTG...GGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR TCA 72 bp GAGTCAAGATGGCCAACTAGCACCGAGAAGTCGTATTaGACTCATTTGCAGTTGTCTTGGCAATTAAGCGTA +
Preference number: 3 (lower is better)
Translates to: ESRWPTSTEKSY*THLQLSWQLSV
Trigger: TACGCTTAATTGCCAAGACAACTGCAAATGAGTTCAATACGACTTCTCGGTGCTAGTTGGCCATCTTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR GCA 72 bp ATGTGGATCACTGAACACAGTACTGGAAGCGCCATTTaGAGGTACAGATTGCAGTCATCATTAAATGAGCCA +
Preference number: 3 (lower is better)
Translates to: MWITEHSTGSAI*RYRLQSSLNEP
Trigger: TGGCTCATTTAATGATGACTGCAATCTGTACCTGCAAATGGCGCTTCCAGTACTGTGTTCAGTGATCCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR GCA 72 bp AGAGCACAGACACTACTACAGACTAGATGCGAAGAATaGGTCACACTCTTGGCTGATAAATGTCCTTTGTCT +
Preference number: 3 (lower is better)
Translates to: RAQTLLQTRCEE*VTLLADKCPLS
Trigger: AGACAAAGGACATTTATCAGCCAAGAGTGTGACGCATTCTTCGCATCTAGTCTGTAGTAGTGTCTGTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR CCA 72 bp TTCCGAATGTCTGAATGCACACTACTCTTCCTAATGTaGGGAGACAACTGTGTGCTTTGTATCTTTCCCACT +
Preference number: 3 (lower is better)
Translates to: FRMSECTLLFLM*GDNCVLCIFPT
Trigger: AGTGGGAAAGATACAAAGCACACAGTTGTCTCCCCACATTAGGAAGAGTAGTGTGCATTCAGACATTCGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CAA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTATTCAAGACACAGAATTaGCAGGGCTCTTCCCCGCCC +
Preference number: 3 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLFKTQN*QGSSPP
Trigger: GGGCGGGGAAGAGCCCTGCAAATTCTGTGTCTTGAA...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CAA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCATTCCTGAAGCAATATTaGTCAGTACCCAAGCTGATT +
Preference number: 3 (lower is better)
Translates to: QPSSTRYLICSADPPEVAFLKQY*SVPKLI
Trigger: AATCAGCTTGGGTACTGACAAATATTGCTTCAGGAA...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR-3UTR CAA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTGACATGGAGAAACCTTaGCAAATTCTGGAGGTGGAC +
Preference number: 3 (lower is better)
Translates to: KILMRAGKMLASITVWICDMEKP*QILEVD
Trigger: GTCCACCTCCAGAATTTGCAAAGGTTTCTCCATGTC...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR TCA 72 bp ATGTGTGTAAGAGAGCAGGTGCGCAAGGCAAGCAAATaGGCGCAAACAGTATTATGGAAAACATTTGAGAAG +
Preference number: 3 (lower is better)
Translates to: MCVREQVRKASK*AQTVLWKTFEK
Trigger: CTTCTCAAATGTTTTCCATAATACTGTTTGCGCTCATTTGCTTGCCTTGCGCACCTGCTCTCTTACACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CAA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACGAATGCGTCACACTCTaGGCTGATAAATGTCCTTTG +
Preference number: 3 (lower is better)
Translates to: VTKKPASVPSSNISELCYECVTL*ADKCPL
Trigger: CAAAGGACATTTATCAGCCAAGAGTGTGACGCATTC...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CAA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTTTCCTGAAGCAATATTaGTCAGTACCCAAGCTGATT +
Preference number: 3 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTFLKQY*SVPKLI
Trigger: AATCAGCTTGGGTACTGACAAATATTGCTTCAGGAA...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR TCA 72 bp CACTTTGAAGCAGGATGTAGAGTGGTCAGAATGACTTaGGGTAAAGCAGAAACACTCAACAACCAGTACATT +
Preference number: 3 (lower is better)
Translates to: HFEAGCRVVRMT*GKAETLNNQYI
Trigger: AATGTACTGGTTGTTGAGTGTTTCTGCTTTACCTCAAGTCATTCTGACCACTCTACATCCTGCTTCAAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR CCA 72 bp TACCCAAAATTTCTCAATCCAACCACATCTACCTGCTaGTCCATCAGATACCAGATGCCTTTACATCCAAAA +
Preference number: 3 (lower is better)
Translates to: YPKFLNPTTSTC*SIRYQMPLHPK
Trigger: TTTTGGATGTAAAGGCATCTGGTATCTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CAA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGATTTGCAGGTACAGATaGCAGTCATCATTAAATGAG +
Preference number: 3 (lower is better)
Translates to: STLPKISQSNHIYLLVHQICRYR*QSSLNE
Trigger: CTCATTTAATGATGACTGCAATCTGTACCTGCAAAT...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CAA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACGAGATGTATAATAGCTaGTCAGGGGCAACTTCCAAA +
Preference number: 3 (lower is better)
Translates to: VTKKPASVPSSNISELCYEMYNS*SGATSK
Trigger: TTTGGAAGTTGCCCCTGACAAGCTATTATACATCTC...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CAA 90 bp GACTCAGAGCCAATAACCTTCATCTGTCATATGGAAGAAACAATCCTAGGGCAAGTTAAGCAGGTCATGTaGAGAAGATGGTTATTTCTT +
Preference number: 3 (lower is better)
Translates to: DSEPITFICHMEETILGQVKQVM*RRWLFL
Trigger: AAGAAATAACCATCTTCTCAACATGACCTGCTTAAC...TTGCCCTAGGATTGTTTCTTCCATATGACAGATGAAGGTTATTGGCTCTGAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR TCA 72 bp CGCCATTTGCAGGTACAGATTGCAGTCATCATTAAATaGGCCAGAAGGCAGATACTGTTTTTATTTTGTGTG +
Preference number: 3 (lower is better)
Translates to: RHLQVQIAVIIK*ARRQILFLFCV
Trigger: CACACAAAATAAAAACAGTATCTGCCTTCTGGCTCATTTAATGATGACTGCAATCTGTACCTGCAAATGGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR TCA 72 bp AAACATCTCCAACTACTAGCAAAAATTCCGAATGTCTaGATGCACACTACTCTTCCTAATGTGGGGAGACAA +
Preference number: 3 (lower is better)
Translates to: KHLQLLAKIPNV*MHTTLPNVGRQ
Trigger: TTGTCTCCCCACATTAGGAAGAGTAGTGTGCATTCAGACATTCGGAATTTTTGCTAGTAGTTGGAGATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR GCA 72 bp AAAGCGATACAAATTAATATGTGCCCCTCTCCTTTCTaGTCTAAGGGAATCTACAAACCAGTATCACATTTA +
Preference number: 3 (lower is better)
Translates to: KAIQINMCPSPF*SKGIYKPVSHL
Trigger: TAAATGTGATACTGGTTTGTAGATTCCCTTAGAGCAGAAAGGAGAGGGGCACATATTAATTTGTATCGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR-3UTR CAA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTAAGACAACTGTGTGCTTaGTATCTTTCCCACTCAAAT +
Preference number: 3 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLRQLCA*YLSHSN
Trigger: ATTTGAGTGGGAAAGATACAAAGCACACAGTTGTCT...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR TCA 72 bp AGATCACTGTTCTTATTTGGGTTAAGCAGGTCATGTTaGGAAGATGGTTATTTCTTTCAGATAAGGATGCTA +
Preference number: 3 (lower is better)
Translates to: RSLFLFGLSRSC*EDGYFFQIRML
Trigger: TAGCATCCTTATCTGAAAGAAATAACCATCTTCTCAACATGACCTGCTTAACCCAAATAAGAACAGTGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR CCA 72 bp TTCCGTGTCAATACTTTCCACATTTGTGCGTTTGAATaGATCCATGTGTTTAGCCATTATTTTACTAAACAC +
Preference number: 3 (lower is better)
Translates to: FRVNTFHICAFE*IHVFSHYFTKH
Trigger: GTGTTTAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAGTATTGACACGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGCTCGCCCGCCCGCCGTaGCACTCCCGCGCACAACCT +
Preference number: 4 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGLARPP*HSRAQP
Trigger: AGGTTGTGCGCGGGAGTGGCACGGCGGGCGGGCGAG...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAACCCGCGCCTCGGCGGTaGTCACCAGGCCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: AQLLPESQFGSEENFLKQPAPRR*SPGLAL
Trigger: GAGAGCGAGGCCTGGTGAGCACCGCCGAGGCGCGGG...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494339.5
CDS-3UTR GCA 90 bp AGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACTAGGTACTTGATCTGTCTCGCCCGCCCGCCGTaGCACTCCCGCGCACAACCT +
Preference number: 4 (lower is better)
Translates to: RRSQSGLIQPSSTRYLICLARPP*HSRAQP
Trigger: AGGTTGTGCGCGGGAGTGGCACGGCGGGCGGGCGAG...ACAGATCAAGTACCTAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494339.5
CDS-3UTR CCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGGGAACTCCACAAACCTaGCCACTACTCCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGGTPQT*PLLLVC
Trigger: GCACACCAGGAGTAGTGGCCAGGTTTGTGGAGTTCC...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGACAAGAGGACTCGACTaGGTAGCCTGGTCTGACACA +
Preference number: 4 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGTRGLD*VAWSDT
Trigger: TGTGTCAGACCAGGCTACCCAGTCGAGTCCTCTTGT...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGACAACCTCGAAGAGCTaGCCCGCGCCTCGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: STLPKISQSNHIYLLVHQTTSKS*PAPRRC
Trigger: GCACCGCCGAGGCGCGGGCCAGCTCTTCGAGGTTGT...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTACAACCTCGAAGAGCTaGCCCGCGCCTCGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTTTSKS*PAPRRC
Trigger: GCACCGCCGAGGCGCGGGCCAGCTCTTCGAGGTTGT...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494339.5
CDS-3UTR CCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGCAGACTGCCTGTTCCTaGACATCTTCAAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGQTACS*TSSNSE
Trigger: CTCAGAGTTTGAAGATGTCCAGGAACAGGCAGTCTG...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGTGTCAGTACCCAAGCTaGTTCAAACTGCAGTGTACA +
Preference number: 4 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGCQYPS*FKLQCT
Trigger: TGTACACTGCAGTTTGAATCAGCTTGGGTACTGACA...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGTCTGACACAGGTACGTaGAAGCAGAGTATTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGSDTGT*KQSIAS
Trigger: TGAAGCAATACTCTGCTTTCACGTACCTGTGTCAGA...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACGATGGGCACAGCTCCTaGCTGAATCACAATTCGGGT +
Preference number: 4 (lower is better)
Translates to: RVHDREEITERLDTTQFYDGHSS*LNHNSG
Trigger: ACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATC...GTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp AGATGGGCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGGGATCAGGACTCTGTTaGTGGCCACTTTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: RWAQLLPESQFGSEENFLGSGLC*WPLCRF
Trigger: GAACCGGCAAAGTGGCCAGCAACAGAGTCCTGATCC...CAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp AGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACTTGCCGGTTCCACTCTaGTTCCTAGCAAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: RVHDREEITERLDTTQFYLPVPL*FLANAR
Trigger: CCTGGCATTTGCTAGGAACCAGAGTGGAACCGGCAA...GTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp AGATGGGCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGTCAGGACTCTGTTGCTaGCCACTTTGCCGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: RWAQLLPESQFGSEENFLSGLCC*PLCRFH
Trigger: GTGGAACCGGCAAAGTGGCCAGCAACAGAGTCCTGA...CAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGATCACAATTCGGGTCTaGAGAGAATTTCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGITIRV*REFPEA
Trigger: TGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGAT...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGGACATCTTCAAACTCTaGGCTGAGCAACTCTATGAA +
Preference number: 4 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGDIFKL*AEQLYE
Trigger: TTCATAGAGTTGCTCAGCTCAGAGTTTGAAGATGTC...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAATTTCCCACTCCAGGTTaGGGTACGCCTGGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: AQLLPESQFGSEENFLKQFPTPG*GTPGSL
Trigger: AAGGGAACCAGGCGTACCTCAACCTGGAGTGGGAAA...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTACCCGCGCCTCGGCGGTaGTCACCAGGCCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLPAPRR*SPGLAL
Trigger: GAGAGCGAGGCCTGGTGAGCACCGCCGAGGCGCGGG...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAAGCCAAGAGCCCAGACTaGCTGTTCCTGGACATCTTC +
Preference number: 4 (lower is better)
Translates to: AQLLPESQFGSEENFLKQAKSPD*LFLDIF
Trigger: GAAGATGTCCAGGAACAGGCAGTCTGGGCTCTTGGC...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp AGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACAAGGTCAACCTGGGGTaGAATGCTGCTGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: RVHDREEITERLDTTQFYKVNLG*NAAVFI
Trigger: GATGAAGACAGCAGCATTGCACCCCAGGTTGACCTT...GTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGAAAGTTCTCTTTTCCTaGGGTGGTCATGATTTCAGG +
Preference number: 4 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGKVLFS*GGHDFR
Trigger: CCTGAAATCATGACCACCCCAGGAAAAGAGAACTTT...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR CAA 72 bp TTCAAGACACAGAATTTGCAGGGCTCTTCCCCGCCCTaGGACAGCCATCTAAGTGTTGTAACCTTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: FKTQNLQGSSPP*DSHLSVVTLGQ
Trigger: TTGCCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAAATTCTGTGTCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp AGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACGATCACAGAGCGGCTTaGTACAACCCAGTTCTACTA +
Preference number: 4 (lower is better)
Translates to: RVHDREEITERLDTTQFYDHRAA*YNPVLL
Trigger: TAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATC...GTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp AAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCATGACCGTGAGGAGATCATTTCCCACTCCAGGTTaGGGTACGCCTGGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: KPFRATCTILESMTVRRSFPTPG*GTPGSL
Trigger: AAGGGAACCAGGCGTACCTCAACCTGGAGTGGGAAA...TGATCTCCTCACGGTCATGGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCAGCCAAGAGCCCAGACTaGCTGTTCCTGGACATCTTC +
Preference number: 4 (lower is better)
Translates to: QPSSTRYLICSADPPEVAAKSPD*LFLDIF
Trigger: GAAGATGTCCAGGAACAGGCAGTCTGGGCTCTTGGC...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp AGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACTAGGTACTTGATCTGTCCTGGGGTGCAATGCTaGTGTCTTCATCTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: RRSQSGLIQPSSTRYLICPGVQC*CLHLRS
Trigger: GGACCGAAGATGAAGACAGCAGCATTGCACCCCAGG...ACAGATCAAGTACCTAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp AAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCATGACCGTGAGGAGATCACCTGGGGTGCAATGCTaGTGTCTTCATCTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: KPFRATCTILESMTVRRSPGVQC*CLHLRS
Trigger: GGACCGAAGATGAAGACAGCAGCATTGCACCCCAGG...TGATCTCCTCACGGTCATGGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp GAGGGGGAAGGATATTGCAGTCTAAGACATAGTCCCTGCACATGGTACTATCTCCAACCTGGGGTGCAATaGTGCTGTCTTCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: EGEGYCSLRHSPCTWYYLQPGVQ*CCLHLR
Trigger: CCGAAGATGAAGACAGCAGCATTGCACCCCAGGTTG...GAGATAGTACCATGTGCAGGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp AGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACTGGAAGATGTACTGCTaGTGGTTAAGGTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: RVHDREEITERLDTTQFYWKMYC*WLRSTW
Trigger: CCAGGTTGACCTTAACCAGCAGCAGTACATCTTCCA...GTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGTGTTACCAAAAAGCCTaGTTCAGTACCAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGCYQKA*FSTKFQ
Trigger: TTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACA...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACTAGGTACTTGATCTGTGGATCAGGACTCTGTTaGTGGCCACTTTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: RRSQSGLIQPSSTRYLICGSGLC*WPLCRF
Trigger: GAACCGGCAAAGTGGCCAGCAACAGAGTCCTGATCC...ACAGATCAAGTACCTAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp GAGGGGGAAGGATATTGCAGTCTAAGACATAGTCCCTGCACATGGTACTATCTCCTGGTTCCTAGCAAATaGCAGGCTCACCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: EGEGYCSLRHSPCTWYYLLVPSK*QAHLQC
Trigger: ACACTGCAGGTGAGCCTGGCATTTGCTAGGAACCAG...GAGATAGTACCATGTGCAGGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCAGGAACTCCACAAACCTaGCCACTACTCCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: QPSSTRYLICSADPPEVAGTPQT*PLLLVC
Trigger: GCACACCAGGAGTAGTGGCCAGGTTTGTGGAGTTCC...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp GAGGGGGAAGGATATTGCAGTCTAAGACATAGTCCCTGCACATGGTACTATCTCCTGCATTCCGGGTCATaGTCAGGCGGTTTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: EGEGYCSLRHSPCTWYYLLHSGS*SGGFAL
Trigger: CAAAGCAAAACCGCCTGACCATGACCCGGAATGCAG...GAGATAGTACCATGTGCAGGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp AGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACAAGATGTACTGCTGCTaGTTAAGGTCAACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RVHDREEITERLDTTQFYKMYCC*LRSTWG
Trigger: ACCCCAGGTTGACCTTAACCAGCAGCAGTACATCTT...GTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGCAGGACCACAAAGCCTaGAACATTTATTTTAATGCA +
Preference number: 4 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGQDHKA*NIYFNA
Trigger: TGCATTAAAATAAATGTTTCAGGCTTTGTGGTCCTG...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AGATGGGCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGGAGGGGGAAGGATATTaGAGTCTAAGACATAGTCCC +
Preference number: 4 (lower is better)
Translates to: RWAQLLPESQFGSEENFLEGEGY*SLRHSP
Trigger: GGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC...CAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp AGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACTAGGTACTTGATCTGTCAACCTGGGGTGCAATaGTGCTGTCTTCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: RRSQSGLIQPSSTRYLICQPGVQ*CCLHLR
Trigger: CCGAAGATGAAGACAGCAGCATTGCACCCCAGGTTG...ACAGATCAAGTACCTAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAAAAGGTCAACCTGGGGTaGAATGCTGCTGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: AQLLPESQFGSEENFLKQKVNLG*NAAVFI
Trigger: GATGAAGACAGCAGCATTGCACCCCAGGTTGACCTT...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp AGATGGGCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGTGGAAGATGTACTGCTaGTGGTTAAGGTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: RWAQLLPESQFGSEENFLWKMYC*WLRSTW
Trigger: CCAGGTTGACCTTAACCAGCAGCAGTACATCTTCCA...CAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTTGTTGCTGGCCACTTTaGCGGTTCCACTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTCCWPL*RFHSGS
Trigger: GGAACCAGAGTGGAACCGGCAAAGTGGCCAGCAACA...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp TACATCAGTGTCACTGACAAACAGCAACCAGGAAAGCACATTCAGACATGGAGATGTTGCTGGCCACTTTaGCGGTTCCACTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: YISVTDKQQPGKHIQTWRCCWPL*RFHSGS
Trigger: GGAACCAGAGTGGAACCGGCAAAGTGGCCAGCAACA...TCTCCATGTCTGAATGTGCTTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp AGATGGGCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGGGGCTGGGAAAATGTTaGCATCTATCACAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RWAQLLPESQFGSEENFLGLGKC*HLSQSG
Trigger: TCCAGACTGTGATAGATGCCAACATTTTCCCAGCCC...CAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCCTGGGTAGCCTGGTCTaGCACAGGTACGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTLGSLV*HRYVKA
Trigger: TGCTTTCACGTACCTGTGTCAGACCAGGCTACCCAG...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AGCCTCAGGATATTTTCCAAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCGATGGGCACAGCTCCTaGCTGAATCACAATTCGGGT +
Preference number: 4 (lower is better)
Translates to: SLRIFSKPFRATCTILESDGHSS*LNHNSG
Trigger: ACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATC...GGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTTGGAAAATATCCTGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp GACTCAGAGCCAATAACCTTCATCTGTCATATGGAAGAAACAATCCTAGGGCAAGCCAAGAGCCCAGACTaGCTGTTCCTGGACATCTTC +
Preference number: 4 (lower is better)
Translates to: DSEPITFICHMEETILGQAKSPD*LFLDIF
Trigger: GAAGATGTCCAGGAACAGGCAGTCTGGGCTCTTGGC...TTGCCCTAGGATTGTTTCTTCCATATGACAGATGAAGGTTATTGGCTCTGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AGATGGGCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGGGGCTACTCAGCAAATaGAATAAACTCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RWAQLLPESQFGSEENFLGLLSK*NKLCRA
Trigger: AGCTCTGCAGAGTTTATTGCATTTGCTGAGTAGCCC...CAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGAGATATCGTCCAACATaGTTCCTTTTTGATAGATTC +
Preference number: 4 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGRYRPT*FLFDRF
Trigger: GAATCTATCAAAAAGGAAGCATGTTGGACGATATCT...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AGATGGGCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGCACAGTCTGGATCTGTaGCCTATTTCCAGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: RWAQLLPESQFGSEENFLHSLDL*PISSCN
Trigger: ATTACAGCTGGAAATAGGGCACAGATCCAGACTGTG...CAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTCTGGTTCCTAGCAAATaGCAGGCTCACCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTLVPSK*QAHLQC
Trigger: ACACTGCAGGTGAGCCTGGCATTTGCTAGGAACCAG...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp GAGGGGGAAGGATATTGCAGTCTAAGACATAGTCCCTGCACATGGTACTATCTCCAGACTGCCTGTTCCTaGACATCTTCAAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: EGEGYCSLRHSPCTWYYLQTACS*TSSNSE
Trigger: CTCAGAGTTTGAAGATGTCCAGGAACAGGCAGTCTG...GAGATAGTACCATGTGCAGGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp AGATGGGCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGCATAGTCCCTGCACATaGTACTATCTCCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: RWAQLLPESQFGSEENFLHSPCT*YYLQQC
Trigger: ACATTGCTGGAGATAGTACCATGTGCAGGGACTATG...CAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp AGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACTAGGTACTTGATCTGTTGGTTAAGGTCAACCTaGGGTGCAATGCTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RRSQSGLIQPSSTRYLICWLRST*GAMLLS
Trigger: AGACAGCAGCATTGCACCCCAGGTTGACCTTAACCA...ACAGATCAAGTACCTAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCAGTTCTGGGAGATCCTaGGCACGGAACTACTGCGTG +
Preference number: 4 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTSSGRS*ARNYCV
Trigger: CACGCAGTAGTTCCGTGCCCAGGATCTCCCAGAACT...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTTTGCCGGTTCCACTCTaGTTCCTAGCAAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTLPVPL*FLANAR
Trigger: CCTGGCATTTGCTAGGAACCAGAGTGGAACCGGCAA...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp AAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCATGACCGTGAGGAGATCAAGGTTGAGGTACGCCTaGTTCCCTTTCTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: KPFRATCTILESMTVRRSRLRYA*FPFSIW
Trigger: CCAAATGGAGAAAGGGAACCAGGCGTACCTCAACCT...TGATCTCCTCACGGTCATGGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp GAGGGGGAAGGATATTGCAGTCTAAGACATAGTCCCTGCACATGGTACTATCTCGTACATCAGTGTCACTaGCAAACAGCAACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: EGEGYCSLRHSPCTWYYLVHQCH*QTATRK
Trigger: TTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTAC...GAGATAGTACCATGTGCAGGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCAGATCACAGAGCGGCTTaGTACAACCCAGTTCTACTA +
Preference number: 4 (lower is better)
Translates to: QPSSTRYLICSADPPEVADHRAA*YNPVLL
Trigger: TAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATC...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp AGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTGAGAAGTTAGCTCCATaGGGACTGTGGGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: RKSHQVIQGFTVEELMKSEKLAP*GLWAPQ
Trigger: TTGTGGAGCCCACAGTCCTCATGGAGCTAACTTCTC...ACTTTTCATGAGTTCTTCCACAGTGAACCCTTGGATTACCTGGTGGCTTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp TCTGGTTACCCTTTTATTAGAAGGGTATTCCACCACAGAGAGCCGGAGGTTTTCCGCAAGGCAAGCAAATaGGCGCAAACAGTATTATGG +
Preference number: 4 (lower is better)
Translates to: SGYPFIRRVFHHREPEVFRKASK*AQTVLW
Trigger: CCATAATACTGTTTGCGCTCATTTGCTTGCCTTGCG...GAAAACCTCCGGCTCTCTGTGGTGGAATACCCTTCTAATAAAAGGGTAACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACCTTCCTCCCTCCTCCTaGGCATCTCATCGGGATTCA +
Preference number: 4 (lower is better)
Translates to: VTKKPASVPSSNISELCYLPPSS*ASHRDS
Trigger: TGAATCCCGATGAGATGCGCAGGAGGAGGGAGGAAG...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAAGATGACACCACCTGGTaGCATCTCCATGTTACTAAT +
Preference number: 4 (lower is better)
Translates to: AQLLPESQFGSEENFLKQDDTTW*HLHVTN
Trigger: ATTAGTAACATGGAGATGGCACCAGGTGGTGTCATC...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp AAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCATGACCGTGAGGAGATCAGAGGGGGAAGGATATTaGAGTCTAAGACATAGTCCC +
Preference number: 4 (lower is better)
Translates to: KPFRATCTILESMTVRRSEGEGY*SLRHSP
Trigger: GGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC...TGATCTCCTCACGGTCATGGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp AGATGGGCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGACATGGAGAAACCTTTaGAAATTCTGGAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: RWAQLLPESQFGSEENFLTWRNL*KFWRWT
Trigger: AGTCCACCTCCAGAATTTGCAAAGGTTTCTCCATGT...CAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACCCTGGGGTGCAATGCTaGTGTCTTCATCTTCGGTCC +
Preference number: 4 (lower is better)
Translates to: VTKKPASVPSSNISELCYPGVQC*CLHLRS
Trigger: GGACCGAAGATGAAGACAGCAGCATTGCACCCCAGG...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTCAACCTGGGGTGCAATaGTGCTGTCTTCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: RKSHQVIQGFTVEELMKSQPGVQ*CCLHLR
Trigger: CCGAAGATGAAGACAGCAGCATTGCACCCCAGGTTG...ACTTTTCATGAGTTCTTCCACAGTGAACCCTTGGATTACCTGGTGGCTTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp GAGGGGGAAGGATATTGCAGTCTAAGACATAGTCCCTGCACATGGTACTATCTCTGTTGGAAGATGTACTaGTGCTGGTTAAGGTCAACC +
Preference number: 4 (lower is better)
Translates to: EGEGYCSLRHSPCTWYYLCWKMY*CWLRST
Trigger: GGTTGACCTTAACCAGCAGCAGTACATCTTCCAACA...GAGATAGTACCATGTGCAGGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp TACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCTGTTGGAAGATGTACTaGTGCTGGTTAAGGTCAACC +
Preference number: 4 (lower is better)
Translates to: YNLRVHDREEITERLDTTCWKMY*CWLRST
Trigger: GGTTGACCTTAACCAGCAGCAGTACATCTTCCAACA...GGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp TCTGGTTACCCTTTTATTAGAAGGGTATTCCACCACAGAGAGCCGGAGGTTTTCACTGGAAGCGCCATTTaGAGGTACAGATTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SGYPFIRRVFHHREPEVFTGSAI*RYRLQS
Trigger: TGACTGCAATCTGTACCTGCAAATGGCGCTTCCAGT...GAAAACCTCCGGCTCTCTGTGGTGGAATACCCTTCTAATAAAAGGGTAACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTGGAACTCCACAAACCTaGCCACTACTCCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: KILMRAGKMLASITVWICGTPQT*PLLLVC
Trigger: GCACACCAGGAGTAGTGGCCAGGTTTGTGGAGTTCC...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAACATAGTCCCTGCACATaGTACTATCTCCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: AQLLPESQFGSEENFLKQHSPCT*YYLQQC
Trigger: ACATTGCTGGAGATAGTACCATGTGCAGGGACTATG...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAATGCAAATTCTGGAGGTaGACTTTTCCCTCTACAGAG +
Preference number: 4 (lower is better)
Translates to: AQLLPESQFGSEENFLKQCKFWR*TFPSTE
Trigger: CTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGCA...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp TCTGGTTACCCTTTTATTAGAAGGGTATTCCACCACAGAGAGCCGGAGGTTTTCGGGCTGGGAAAATGTTaGCATCTATCACAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SGYPFIRRVFHHREPEVFGLGKC*HLSQSG
Trigger: TCCAGACTGTGATAGATGCCAACATTTTCCCAGCCC...GAAAACCTCCGGCTCTCTGTGGTGGAATACCCTTCTAATAAAAGGGTAACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp AAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCATGACCGTGAGGAGATCAGGGCTGGGAAAATGTTaGCATCTATCACAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: KPFRATCTILESMTVRRSGLGKC*HLSQSG
Trigger: TCCAGACTGTGATAGATGCCAACATTTTCCCAGCCC...TGATCTCCTCACGGTCATGGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp TACATCAGTGTCACTGACAAACAGCAACCAGGAAAGCACATTCAGACATGGAGATGGTTAAGGTCAACCTaGGGTGCAATGCTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: YISVTDKQQPGKHIQTWRWLRST*GAMLLS
Trigger: AGACAGCAGCATTGCACCCCAGGTTGACCTTAACCA...TCTCCATGTCTGAATGTGCTTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
3UTR CAA 72 bp TTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTaGATACAACCCAGTTCTACTAGGTACTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: LESMTVRRSQSG*IQPSSTRYLIC
Trigger: ACAGATCAAGTACCTAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAAAATTCTCTTTTCGTTTaGGGAACTCCACAAACCTGG +
Preference number: 4 (lower is better)
Translates to: AQLLPESQFGSEENFLKQNSLFV*GTPQTW
Trigger: CCAGGTTTGTGGAGTTCCTCAAACGAAAAGAGAATT...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAAGACATCTTCAAACTCTaGGCTGAGCAACTCTATGAA +
Preference number: 4 (lower is better)
Translates to: AQLLPESQFGSEENFLKQDIFKL*AEQLYE
Trigger: TTCATAGAGTTGCTCAGCTCAGAGTTTGAAGATGTC...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp AGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACTAGGTACTTGATCTGTCTTGATCTGTTCAGCTaGTCCTCCAGAAGTTGCATT +
Preference number: 4 (lower is better)
Translates to: RRSQSGLIQPSSTRYLICLDLFS*SSRSCI
Trigger: AATGCAACTTCTGGAGGATCAGCTGAACAGATCAAG...ACAGATCAAGTACCTAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCACTTGATCTGTTCAGCTaGTCCTCCAGAAGTTGCATT +
Preference number: 4 (lower is better)
Translates to: QPSSTRYLICSADPPEVALDLFS*SSRSCI
Trigger: AATGCAACTTCTGGAGGATCAGCTGAACAGATCAAG...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp AAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCATGACCGTGAGGAGATCAGTTCTACTAGGTACTTaGTCTGTTCAGCTGATCCTC +
Preference number: 4 (lower is better)
Translates to: KPFRATCTILESMTVRRSVLLGT*SVQLIL
Trigger: GAGGATCAGCTGAACAGATCAAGTACCTAGTAGAAC...TGATCTCCTCACGGTCATGGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCAGAAAGCACATTCACTaGAGGCTGAAGGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTRKHIH*RLKVRE
Trigger: CTCCCTCACCTTCAGCCTTCAGTGAATGTGCTTTCT...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp TACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCTGTCAGTACCCAAGCTaGTTCAAACTCCTATCAAGT +
Preference number: 4 (lower is better)
Translates to: YNLRVHDREEITERLDTTCQYPS*FKLLSS
Trigger: ACTTGATAGGAGTTTGAATCAGCTTGGGTACTGACA...GGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp GAGGGGGAAGGATATTGCAGTCTAAGACATAGTCCCTGCACATGGTACTATCTCTGCTCTTCTCTTTTCTaGTTTCGTAACTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: EGEGYCSLRHSPCTWYYLCSSLF*FRNCSP
Trigger: AGGACTGCAGTTACGAAAGCAGAAAAGAGAAGAGCA...GAGATAGTACCATGTGCAGGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAATGCTCTTCTCTTTTCTaGTTTCGTAACTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: AQLLPESQFGSEENFLKQCSSLF*FRNCSP
Trigger: AGGACTGCAGTTACGAAAGCAGAAAAGAGAAGAGCA...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp AGATGGGCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGCTCCGCTTGAATAACTaGTCTTCTCTTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RWAQLLPESQFGSEENFLLRLNN*SSLFCF
Trigger: AAAGCAGAAAAGAGAAGAGCAGTTATTCAAGCGGAG...CAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCAGATGACACCACCTGGTaGCATCTCCATGTTACTAAT +
Preference number: 4 (lower is better)
Translates to: QPSSTRYLICSADPPEVADDTTW*HLHVTN
Trigger: ATTAGTAACATGGAGATGGCACCAGGTGGTGTCATC...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp TCTGGTTACCCTTTTATTAGAAGGGTATTCCACCACAGAGAGCCGGAGGTTTTCACTAGATGCGAAGAATaGGTCACACTCTTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: SGYPFIRRVFHHREPEVFTRCEE*VTLLAD
Trigger: ATCAGCCAAGAGTGTGACGCATTCTTCGCATCTAGT...GAAAACCTCCGGCTCTCTGTGGTGGAATACCCTTCTAATAAAAGGGTAACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAAAATGCCAGGCTCACCTaGAGTGTACAATTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: AQLLPESQFGSEENFLKQNARLT*SVQFSF
Trigger: AAAAGAGAATTGTACACTGCAGGTGAGCCTGGCATT...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp AGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTCCTGGCCACTACTCCTaGTGTGCTGATAACTTCATC +
Preference number: 4 (lower is better)
Translates to: RKSHQVIQGFTVEELMKSPGHYS*CADNFI
Trigger: GATGAAGTTATCAGCACACCAGGAGTAGTGGCCAGG...ACTTTTCATGAGTTCTTCCACAGTGAACCCTTGGATTACCTGGTGGCTTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp TACATCAGTGTCACTGACAAACAGCAACCAGGAAAGCACATTCAGACATGGAGACAGACTGCCTGTTCCTaGACATCTTCAAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: YISVTDKQQPGKHIQTWRQTACS*TSSNSE
Trigger: CTCAGAGTTTGAAGATGTCCAGGAACAGGCAGTCTG...TCTCCATGTCTGAATGTGCTTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp AGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACTAGGTACTTGATCTGTGCATCTATCACAGTCTaGATCTGTGCCCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: RRSQSGLIQPSSTRYLICASITV*ICALFP
Trigger: TGGAAATAGGGCACAGATCCAGACTGTGATAGATGC...ACAGATCAAGTACCTAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGAAGATGTACTGCTGCTaGTTAAGGTCAACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: STLPKISQSNHIYLLVHQKMYCC*LRSTWG
Trigger: ACCCCAGGTTGACCTTAACCAGCAGCAGTACATCTT...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTAAGATGTACTGCTGCTaGTTAAGGTCAACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTKMYCC*LRSTWG
Trigger: ACCCCAGGTTGACCTTAACCAGCAGCAGTACATCTT...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp TCTGGTTACCCTTTTATTAGAAGGGTATTCCACCACAGAGAGCCGGAGGTTTTCAACATTGAGTCAAGATaGCCAACTAGCACCGAGAAG +
Preference number: 4 (lower is better)
Translates to: SGYPFIRRVFHHREPEVFNIESR*PTSTEK
Trigger: CTTCTCGGTGCTAGTTGGCCATCTTGACTCAATGTT...GAAAACCTCCGGCTCTCTGTGGTGGAATACCCTTCTAATAAAAGGGTAACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR CAA 72 bp GAACACAGTACTGGAAGCGCCATTTGCAGGTACAGATaGCAGTCATCATTAAATGAGCCAGAAGGCAGATAC +
Preference number: 4 (lower is better)
Translates to: EHSTGSAICRYR*QSSLNEPEGRY
Trigger: GTATCTGCCTTCTGGCTCATTTAATGATGACTGCAATCTGTACCTGCAAATGGCGCTTCCAGTACTGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp AAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCATGACCGTGAGGAGATCAAATTCTCTTTTCGTTTaGGGAACTCCACAAACCTGG +
Preference number: 4 (lower is better)
Translates to: KPFRATCTILESMTVRRSNSLFV*GTPQTW
Trigger: CCAGGTTTGTGGAGTTCCTCAAACGAAAAGAGAATT...TGATCTCCTCACGGTCATGGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp AAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCATGACCGTGAGGAGATCAGACATCTTCAAACTCTaGGCTGAGCAACTCTATGAA +
Preference number: 4 (lower is better)
Translates to: KPFRATCTILESMTVRRSDIFKL*AEQLYE
Trigger: TTCATAGAGTTGCTCAGCTCAGAGTTTGAAGATGTC...TGATCTCCTCACGGTCATGGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTGTACATCAGTGTCACTaGCAAACAGCAACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTVHQCH*QTATRK
Trigger: TTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTAC...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGGTTCTACTAGGTACTTaGTCTGTTCAGCTGATCCTC +
Preference number: 4 (lower is better)
Translates to: STLPKISQSNHIYLLVHQVLLGT*SVQLIL
Trigger: GAGGATCAGCTGAACAGATCAAGTACCTAGTAGAAC...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTGTTCTACTAGGTACTTaGTCTGTTCAGCTGATCCTC +
Preference number: 4 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTVLLGT*SVQLIL
Trigger: GAGGATCAGCTGAACAGATCAAGTACCTAGTAGAAC...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp AGCCTCAGGATATTTTCCAAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCTGGGGAGAGAACAAATaGGTTTACTGTGAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLRIFSKPFRATCTILESWGENK*VYCEEL
Trigger: GAGCTCTTCACAGTAAACTCATTTGTTCTCTCCCCA...GGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTTGGAAAATATCCTGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485027.5
CDS-3UTR TCA 90 bp AGCCTCAGGATATTTTCCAAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCTTCCTGGGGTGGTCATaGTTTCTACAATACAAGTGG +
Preference number: 4 (lower is better)
Translates to: SLRIFSKPFRATCTILESFLGWS*FLQYKW
Trigger: CCACTTGTATTGTAGAAATCATGACCACCCCAGGAA...GGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTTGGAAAATATCCTGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485027.5
CDS-3UTR GCA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCGAGGGGGAAGGATATTaGAGTCTAAGACATAGTCCC +
Preference number: 4 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTEGEGY*SLRHSP
Trigger: GGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp CTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTAGACAAAGCCCATACTaGATTCCGGGTCATGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLPKSLLQYQVPTYLSYARQSPY*IPGHGQ
Trigger: CTGACCATGACCCGGAATGCAGTATGGGCTTTGTCT...AGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp TACATCAGTGTCACTGACAAACAGCAACCAGGAAAGCACATTCAGACATGGAGAGGGCTACTCAGCAAATaGAATAAACTCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: YISVTDKQQPGKHIQTWRGLLSK*NKLCRA
Trigger: AGCTCTGCAGAGTTTATTGCATTTGCTGAGTAGCCC...TCTCCATGTCTGAATGTGCTTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp AGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACAGATATCGTCCAACATaGTTCCTTTTTGATAGATTC +
Preference number: 4 (lower is better)
Translates to: RVHDREEITERLDTTQFYRYRPT*FLFDRF
Trigger: GAATCTATCAAAAAGGAAGCATGTTGGACGATATCT...GTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp CTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTCCAACCACATCTACCTaGTGGTCCATCAGATACCAG +
Preference number: 4 (lower is better)
Translates to: LLPKSLLQYQVPTYLSYAPTTST*WSIRYQ
Trigger: CTGGTATCTGATGGACCAGCAGGTAGATGTGGTTGG...AGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp AAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCATGACCGTGAGGAGATCAAAAGTTCTCTTTTCCTaGGGTGGTCATGATTTCAGG +
Preference number: 4 (lower is better)
Translates to: KPFRATCTILESMTVRRSKVLFS*GGHDFR
Trigger: CCTGAAATCATGACCACCCCAGGAAAAGAGAACTTT...TGATCTCCTCACGGTCATGGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494339.5
CDS-3UTR CCA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCAGTGATGACACCACCTaGTGCCATCTCCATGTTACT +
Preference number: 4 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTSDDTT*CHLHVT
Trigger: AGTAACATGGAGATGGCACCAGGTGGTGTCATCACT...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTCCTGGCCACTACTCCTaGTGTGCTGATAACTTCATC +
Preference number: 4 (lower is better)
Translates to: KILMRAGKMLASITVWICPGHYS*CADNFI
Trigger: GATGAAGTTATCAGCACACCAGGAGTAGTGGCCAGG...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp AGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTTTCCGTAAAAGAGAGTaGGCCGTTCTGGTTACCCTT +
Preference number: 4 (lower is better)
Translates to: RKSHQVIQGFTVEELMKSFRKRE*AVLVTL
Trigger: AAGGGTAACCAGAACGGCCCACTCTCTTTTACGGAA...ACTTTTCATGAGTTCTTCCACAGTGAACCCTTGGATTACCTGGTGGCTTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp TCTGGTTACCCTTTTATTAGAAGGGTATTCCACCACAGAGAGCCGGAGGTTTTCGTCCAAGCACAAATGTaGATCACTGAACACAGTACT +
Preference number: 4 (lower is better)
Translates to: SGYPFIRRVFHHREPEVFVQAQM*ITEHST
Trigger: AGTACTGTGTTCAGTGATCCACATTTGTGCTTGGAC...GAAAACCTCCGGCTCTCTGTGGTGGAATACCCTTCTAATAAAAGGGTAACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGATGCATCCCCCAAGTTaGGGGATTAAATCGCTGAAA +
Preference number: 4 (lower is better)
Translates to: STLPKISQSNHIYLLVHQMHPPS*GIKSLK
Trigger: TTTCAGCGATTTAATCCCCCAACTTGGGGGATGCAT...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTAGGTTGAGGTACGCCTaGTTCCCTTTCTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: KILMRAGKMLASITVWICRLRYA*FPFSIW
Trigger: CCAAATGGAGAAAGGGAACCAGGCGTACCTCAACCT...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCACAACATTTCTCCGCTTaGATAACTGCTCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: QPSSTRYLICSADPPEVAQHFSA*ITALLF
Trigger: AAAGAGAAGAGCAGTTATTCAAGCGGAGAAATGTTG...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTATCACAATTCGGGTCTaGAGAGAATTTCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTITIRV*REFPEA
Trigger: TGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGAT...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACGATCACAGAGCGGCTTaGTACAACCCAGTTCTACTA +
Preference number: 4 (lower is better)
Translates to: VTKKPASVPSSNISELCYDHRAA*YNPVLL
Trigger: TAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATC...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGGAAAGATGTTTGGCCTaGGAGGGCCTACACTCCAGT +
Preference number: 4 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKERCLA*EGLHSS
Trigger: ACTGGAGTGTAGGCCCTCTCAGGCCAAACATCTTTC...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCGATGACACCACCTGGTaGCATCTCCATGTTACTAAT +
Preference number: 4 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTDDTTW*HLHVTN
Trigger: ATTAGTAACATGGAGATGGCACCAGGTGGTGTCATC...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAAATGGTCAGGCGGTTTTaGTTTGAAAATAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: AQLLPESQFGSEENFLKQMVRRF*FENNCK
Trigger: TTTGCAGTTATTTTCAAAGCAAAACCGCCTGACCAT...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTACATGGAGAAACCTTTaGAAATTCTGGAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTTWRNL*KFWRWT
Trigger: AGTCCACCTCCAGAATTTGCAAAGGTTTCTCCATGT...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp GACTCAGAGCCAATAACCTTCATCTGTCATATGGAAGAAACAATCCTAGGGCAACTACTACAGACTAGATaGGAAGAATGCGTCACACTC +
Preference number: 4 (lower is better)
Translates to: DSEPITFICHMEETILGQLLQTR*EECVTL
Trigger: GAGTGTGACGCATTCTTCGCATCTAGTCTGTAGTAG...TTGCCCTAGGATTGTTTCTTCCATATGACAGATGAAGGTTATTGGCTCTGAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTTCAAGACACAGAATTTaGAGGGCTCTTCCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: NVISVTKKPASVPSSNISSRHRI*RALPRP
Trigger: AGGGCGGGGAAGAGCCCTGCAAATTCTGTGTCTTGA...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTATGGGCACGGAACTACTaGGTGGCCACTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLWARNY*VATAFF
Trigger: GAAGAAAGCAGTGGCCACGCAGTAGTTCCGTGCCCA...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp TACATCAGTGTCACTGACAAACAGCAACCAGGAAAGCACATTCAGACATGGAGAAATGCCAGGCTCACCTaGAGTGTACAATTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: YISVTDKQQPGKHIQTWRNARLT*SVQFSF
Trigger: AAAAGAGAATTGTACACTGCAGGTGAGCCTGGCATT...TCTCCATGTCTGAATGTGCTTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCCATAGTCCCTGCACATaGTACTATCTCCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTHSPCT*YYLQQC
Trigger: ACATTGCTGGAGATAGTACCATGTGCAGGGACTATG...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTCTGCATTCCGGGTCATaGTCAGGCGGTTTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: NVISVTKKPASVPSSNISLHSGS*SGGFAL
Trigger: CAAAGCAAAACCGCCTGACCATGACCCGGAATGCAG...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp GACTCAGAGCCAATAACCTTCATCTGTCATATGGAAGAAACAATCCTAGGGCAATGCAAATTCTGGAGGTaGACTTTTCCCTCTACAGAG +
Preference number: 4 (lower is better)
Translates to: DSEPITFICHMEETILGQCKFWR*TFPSTE
Trigger: CTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGCA...TTGCCCTAGGATTGTTTCTTCCATATGACAGATGAAGGTTATTGGCTCTGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACTTAAATTCGCATCCATaGCACTGCTTCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VTKKPASVPSSNISELCYLNSHP*HCFLRQ
Trigger: CTGCCTCAGGAAGCAGTGCCATGGATGCGAATTTAA...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp TACATCAGTGTCACTGACAAACAGCAACCAGGAAAGCACATTCAGACATGGAGAATGAAAGCCTCCATCTaGCATAACTTCTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: YISVTDKQQPGKHIQTWRMKASI*HNFFFC
Trigger: ACAGAAGAAGAAGTTATGTCAGATGGAGGCTTTCAT...TCTCCATGTCTGAATGTGCTTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCACTGAAGAGAATTTCCTaGAGCAATATTTGTCAGTAC +
Preference number: 4 (lower is better)
Translates to: QPSSTRYLICSADPPEVALKRIS*SNICQY
Trigger: GTACTGACAAATATTGCTTCAGGAAATTCTCTTCAG...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCATCCCTTTTCTTCACTaGACATCATCCTTAGACACC +
Preference number: 4 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTIPFLH*TSSLDT
Trigger: GGTGTCTAAGGATGATGTTCAGTGAAGAAAAGGGAT...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTAGATGGGCACAGCTCCTaGCTGAATCACAATTCGGGT +
Preference number: 4 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLDGHSS*LNHNSG
Trigger: ACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATC...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp TCTGGTTACCCTTTTATTAGAAGGGTATTCCACCACAGAGAGCCGGAGGTTTTCATGGTCAGGCGGTTTTaGTTTGAAAATAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: SGYPFIRRVFHHREPEVFMVRRF*FENNCK
Trigger: TTTGCAGTTATTTTCAAAGCAAAACCGCCTGACCAT...GAAAACCTCCGGCTCTCTGTGGTGGAATACCCTTCTAATAAAAGGGTAACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACTAGGTACTTGATCTGTATGGTCAGGCGGTTTTaGTTTGAAAATAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: RRSQSGLIQPSSTRYLICMVRRF*FENNCK
Trigger: TTTGCAGTTATTTTCAAAGCAAAACCGCCTGACCAT...ACAGATCAAGTACCTAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp CTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTGGGCTACTCAGCAAATaGAATAAACTCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LLPKSLLQYQVPTYLSYAGLLSK*NKLCRA
Trigger: AGCTCTGCAGAGTTTATTGCATTTGCTGAGTAGCCC...AGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTCACAGTCTGGATCTGTaGCCTATTTCCAGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: KILMRAGKMLASITVWICHSLDL*PISSCN
Trigger: ATTACAGCTGGAAATAGGGCACAGATCCAGACTGTG...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp ATTCGAAATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACAAAGGTCAACCTGGGGTaGAATGCTGCTGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: IRNPHTSNRNEPLPNSKTKVNLG*NAAVFI
Trigger: GATGAAGACAGCAGCATTGCACCCCAGGTTGACCTT...TGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATTTCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp TCTGGTTACCCTTTTATTAGAAGGGTATTCCACCACAGAGAGCCGGAGGTTTTCATACAAATTAATATGTaGCCCTCTCCTTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SGYPFIRRVFHHREPEVFIQINM*PSPFCS
Trigger: AGAGCAGAAAGGAGAGGGGCACATATTAATTTGTAT...GAAAACCTCCGGCTCTCTGTGGTGGAATACCCTTCTAATAAAAGGGTAACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTAGGTTTAAAAGGGTATaGTCTGAAACAGAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RKSHQVIQGFTVEELMKSRFKRV*SETEVS
Trigger: GCTCACCTCTGTTTCAGAGCATACCCTTTTAAACCT...ACTTTTCATGAGTTCTTCCACAGTGAACCCTTGGATTACCTGGTGGCTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTTGCAAATTCTGGAGGTaGACTTTTCCCTCTACAGAG +
Preference number: 4 (lower is better)
Translates to: KILMRAGKMLASITVWICCKFWR*TFPSTE
Trigger: CTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGCA...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp AAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCATGACCGTGAGGAGATCATTTGATAGATTCCTTTaGGCTACTCAGCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: KPFRATCTILESMTVRRSFDRFL*ATQQMQ
Trigger: TTGCATTTGCTGAGTAGCCCAAAGGAATCTATCAAA...TGATCTCCTCACGGTCATGGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CCA 90 bp CTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTGCATCTATCACAGTCTaGATCTGTGCCCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: LLPKSLLQYQVPTYLSYAASITV*ICALFP
Trigger: TGGAAATAGGGCACAGATCCAGACTGTGATAGATGC...AGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGTGGTTAAGGTCAACCTaGGGTGCAATGCTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKWLRST*GAMLLS
Trigger: AGACAGCAGCATTGCACCCCAGGTTGACCTTAACCA...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTCACGGAACTACTGCGTaGCCACTGCTTTCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: NVISVTKKPASVPSSNISHGTTA*PLLSSR
Trigger: TCTTGAAGAAAGCAGTGGCCACGCAGTAGTTCCGTG...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTAAAGTTCTCTTTTCCTaGGGTGGTCATGATTTCTAC +
Preference number: 4 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTKVLFS*GGHDFY
Trigger: GTAGAAATCATGACCACCCCAGGAAAAGAGAACTTT...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485027.5
3UTR CAA 72 bp CTACTACAGACTAGATGCGAAGAATGCGTCACACTCTaGGCTGATAAATGTCCTTTGTCTTTGACTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LLQTRCEECVTL*ADKCPLSLTLS
Trigger: AGAAAGAGTCAAAGACAAAGGACATTTATCAGCCAAGAGTGTGACGCATTCTTCGCATCTAGTCTGTAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR CAA 72 bp GCAGTTTGTAAAATACTAATGAGGGCTGGGAAAATGTaGGCATCTATCACAGTCTGGATCTGTGCCCTATTT +
Preference number: 4 (lower is better)
Translates to: AVCKILMRAGKM*ASITVWICALF
Trigger: AAATAGGGCACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTTACAAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCATGAAAGCCTCCATCTaGCATAACTTCTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTMKASI*HNFFFC
Trigger: ACAGAAGAAGAAGTTATGTCAGATGGAGGCTTTCAT...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp TACATCAGTGTCACTGACAAACAGCAACCAGGAAAGCACATTCAGACATGGAGACTGAAGAGAATTTCCTaGAGCAATATTTGTCAGTAC +
Preference number: 4 (lower is better)
Translates to: YISVTDKQQPGKHIQTWRLKRIS*SNICQY
Trigger: GTACTGACAAATATTGCTTCAGGAAATTCTCTTCAG...TCTCCATGTCTGAATGTGCTTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp ATTCGAAATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACAACAAATGTGGATCACTaGACACAGTACTGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: IRNPHTSNRNEPLPNSKTTNVDH*TQYWKR
Trigger: GCGCTTCCAGTACTGTGTTCAGTGATCCACATTTGT...TGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATTTCGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCCATCATGATGAGGTATaGAAAGCTCTGAATATCCCT +
Preference number: 4 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTHHDEV*KALNIP
Trigger: AGGGATATTCAGAGCTTTTCATACCTCATCATGATG...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGGGGGGATTAAATCGCTaGAATGTTTATTTAGCACTA +
Preference number: 4 (lower is better)
Translates to: STLPKISQSNHIYLLVHQGGLNR*NVYLAL
Trigger: TAGTGCTAAATAAACATTTCAGCGATTTAATCCCCC...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCCATGTTACCTTAATTTaGCCTACAGGGAAAACACTC +
Preference number: 4 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTHVTLI*PTGKTL
Trigger: GAGTGTTTTCCCTGTAGGTCAAATTAAGGTAACATG...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTCATGGCACTGCTTCCTaGGGCAGTAATTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: NVISVTKKPASVPSSNISHGTAS*GSNSSK
Trigger: CTTTGAAGAATTACTGCCTCAGGAAGCAGTGCCATG...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp GACTCAGAGCCAATAACCTTCATCTGTCATATGGAAGAAACAATCCTAGGGCAACTCCGCTTGAATAACTaGTCTTCTCTTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: DSEPITFICHMEETILGQLRLNN*SSLFCF
Trigger: AAAGCAGAAAAGAGAAGAGCAGTTATTCAAGCGGAG...TTGCCCTAGGATTGTTTCTTCCATATGACAGATGAAGGTTATTGGCTCTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTAAATGCAATAAACTCTaGAGAGCTGAGCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTKCNKL*RAEQFR
Trigger: TCTGAATTGCTCAGCTCTGCAGAGTTTATTGCATTT...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCAAGATATCGTCCAACATaGTTCCTTTTTGATAGATTC +
Preference number: 4 (lower is better)
Translates to: QPSSTRYLICSADPPEVARYRPT*FLFDRF
Trigger: GAATCTATCAAAAAGGAAGCATGTTGGACGATATCT...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp AGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTAAAGTATGTGTTATCTaGCAGTCACAGAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: RKSHQVIQGFTVEELMKSKVCVI*QSQRGK
Trigger: TTTTCCCCTCTGTGACTGGCAGATAACACATACTTT...ACTTTTCATGAGTTCTTCCACAGTGAACCCTTGGATTACCTGGTGGCTTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGCCTGTAATCCTGAACTaGTGGGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKPVILN*WDYRHE
Trigger: CTCATGCCTGTAATCCCAGCAGTTCAGGATTACAGG...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGTTTGATAGATTCCTTTaGGCTACTCAGCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: STLPKISQSNHIYLLVHQFDRFL*ATQQMQ
Trigger: TTGCATTTGCTGAGTAGCCCAAAGGAATCTATCAAA...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGACCACATCTACCTGCTaGTCCATCAGATACCAGATG +
Preference number: 4 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKTTSTC*SIRYQM
Trigger: CATCTGGTATCTGATGGACCAGCAGGTAGATGTGGT...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTATGAAAGCCTCCATCTaGCATAACTTCTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KILMRAGKMLASITVWICMKASI*HNFFFC
Trigger: ACAGAAGAAGAAGTTATGTCAGATGGAGGCTTTCAT...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR TCA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGGTTATAGATGGGAGTTaGCTAGTTTTGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKVIDGS*LVLQWL
Trigger: CAGCCACTGCAAAACTAGTCAACTCCCATCTATAAC...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACAAAATTCCGAATGTCTaGATGCACACTACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VTKKPASVPSSNISELCYKIPNV*MHTTLP
Trigger: AGGAAGAGTAGTGTGCATTCAGACATTCGGAATTTT...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp AGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTTTAGTTACAGGAACATaGAAGAAAGTGTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: RKSHQVIQGFTVEELMKSLVTGT*KKVFHR
Trigger: TCTGTGGAACACTTTCTTTCATGTTCCTGTAACTAA...ACTTTTCATGAGTTCTTCCACAGTGAACCCTTGGATTACCTGGTGGCTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGGTGGTCAGAATGACTTaGGGTAAAGCAGAAACACTC +
Preference number: 4 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKVVRMT*GKAETL
Trigger: GAGTGTTTCTGCTTTACCTCAAGTCATTCTGACCAC...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTCTCCGCTTGAATAACTaGTCTTCTCTTTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KILMRAGKMLASITVWICLRLNN*SSLFCF
Trigger: AAAGCAGAAAAGAGAAGAGCAGTTATTCAAGCGGAG...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR GCA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGCACAGTCTGGATCTGTaGCCTATTTCCAGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKHSLDL*PISSCN
Trigger: ATTACAGCTGGAAATAGGGCACAGATCCAGACTGTG...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTATGGAAGATGTACTGCTaGTGGTTAAGGTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLWKMYC*WLRSTW
Trigger: CCAGGTTGACCTTAACCAGCAGCAGTACATCTTCCA...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTTGTTGGAAGATGTACTaGTGCTGGTTAAGGTCAACC +
Preference number: 4 (lower is better)
Translates to: NVISVTKKPASVPSSNISCWKMY*CWLRST
Trigger: GGTTGACCTTAACCAGCAGCAGTACATCTTCCAACA...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACTTCCGAATGTCTGAATaGACACTACTCTTCCTAATG +
Preference number: 4 (lower is better)
Translates to: VTKKPASVPSSNISELCYFRMSE*TLLFLM
Trigger: CATTAGGAAGAGTAGTGTGCATTCAGACATTCGGAA...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTACTACTGCGTGGCCACTaGTTTCTTCAAGACACAGAA +
Preference number: 4 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLLLRGH*FLQDTE
Trigger: TTCTGTGTCTTGAAGAAAGCAGTGGCCACGCAGTAG...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp ATTCGAAATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACTACTCTTCCTAATGTaGGGAGACAACTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: IRNPHTSNRNEPLPNSKTLLFLM*GDNCVL
Trigger: AAGCACACAGTTGTCTCCCCACATTAGGAAGAGTAG...TGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATTTCGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTAGTACATCAGTGTCACTaGCAAACAGCAACCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLVHQCH*QTATRK
Trigger: TTTCCTGGTTGCTGTTTGTCAGTGACACTGATGTAC...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTACTTGATCTGTTCAGCTaGTCCTCCAGAAGTTGCATT +
Preference number: 4 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLLDLFS*SSRSCI
Trigger: AATGCAACTTCTGGAGGATCAGCTGAACAGATCAAG...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACATTATGGAAAACATTTaGGAAGTTAGCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: VTKKPASVPSSNISELCYIMENI*EVSSMR
Trigger: CCTCATGGAGCTAACTTCTCAAATGTTTTCCATAAT...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTAGCAGTCATCATTAAATaGGCCAGAAGGCAGATACTG +
Preference number: 4 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLAVIIK*ARRQIL
Trigger: CAGTATCTGCCTTCTGGCTCATTTAATGATGACTGC...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp ATTCGAAATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACAACCGAGAAGTCGTATTaGACTCATTTGCAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: IRNPHTSNRNEPLPNSKTTEKSY*THLQLS
Trigger: AGACAACTGCAAATGAGTTCAATACGACTTCTCGGT...TGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATTTCGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACCTTTATCAGATATTCTaGTGTCCTGGTATCCATTGT +
Preference number: 4 (lower is better)
Translates to: VTKKPASVPSSNISELCYLYQIF*CPGIHC
Trigger: ACAATGGATACCAGGACATCAGAATATCTGATAAAG...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp ATTCGAAATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACATGCTCTTCTCTTTTCTaGTTTCGTAACTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: IRNPHTSNRNEPLPNSKTCSSLF*FRNCSP
Trigger: AGGACTGCAGTTACGAAAGCAGAAAAGAGAAGAGCA...TGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATTTCGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR CAA 72 bp GAAGAATGCGTCACACTCTTGGCTGATAAATGTCCTTaGTCTTTGACTCTTTCTAGTTTGAATGAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: EECVTLLADKCP*SLTLSSLNEVD
Trigger: ATCCACTTCATTCAAACTAGAAAGAGTCAAAGACAAAGGACATTTATCAGCCAAGAGTGTGACGCATTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGCAACATTTCTCCGCTTaGATAACTGCTCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKQHFSA*ITALLF
Trigger: AAAGAGAAGAGCAGTTATTCAAGCGGAGAAATGTTG...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTAAATTCTCTTTTCGTTTaGGGAACTCCACAAACCTGG +
Preference number: 4 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLNSLFV*GTPQTW
Trigger: CCAGGTTTGTGGAGTTCCTCAAACGAAAAGAGAATT...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGTCGTTTACCCTTAGTTaGAAACAGAACGGAACACTT +
Preference number: 4 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKSFTLS*KQNGTL
Trigger: AAGTGTTCCGTTCTGTTTTCAACTAAGGGTAAACGA...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTAACATGGAGAAACCTTTaGAAATTCTGGAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLTWRNL*KFWRWT
Trigger: AGTCCACCTCCAGAATTTGCAAAGGTTTCTCCATGT...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTCCTAGTTACACTGATTaGATTTGGGAAAATTGGAGG +
Preference number: 4 (lower is better)
Translates to: NVISVTKKPASVPSSNISPSYTD*IWENWR
Trigger: CCTCCAATTTTCCCAAATGCAATCAGTGTAACTAGG...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp ATTCGAAATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACAAATGCGTCACACTCTTaGCTGATAAATGTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: IRNPHTSNRNEPLPNSKTNASHS*LINVLC
Trigger: ACAAAGGACATTTATCAGCCAAGAGTGTGACGCATT...TGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATTTCGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACAGTAACAGTTATAGATaGGAGTTGACTAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: VTKKPASVPSSNISELCYSNSYR*ELTSFA
Trigger: TGCAAAACTAGTCAACTCCCATCTATAACTGTTACT...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACACAAATAATATAGATTaGAAGTTTGGAGGATGGAGG +
Preference number: 4 (lower is better)
Translates to: VTKKPASVPSSNISELCYTNNID*KFGGWR
Trigger: CCTCCATCCTCCAAACTTCCAATCTATATTATTTGT...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTCGTTTAAAAGGGTCTTaGTCAATTAGTTACAGGAAC +
Preference number: 4 (lower is better)
Translates to: NVISVTKKPASVPSSNISRLKGS*SISYRN
Trigger: GTTCCTGTAACTAATTGATCAAGACCCTTTTAAACG...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTAAATGCAATAAACTCTaGAGAGCTGAGCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: NVISVTKKPASVPSSNISKCNKL*RAEQFR
Trigger: TCTGAATTGCTCAGCTCTGCAGAGTTTATTGCATTT...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTATCACTGTTCTTATTTaGGTTAAGCAGGTCATGTTG +
Preference number: 4 (lower is better)
Translates to: NVISVTKKPASVPSSNISITVLI*VKQVML
Trigger: CAACATGACCTGCTTAACCCAAATAAGAACAGTGAT...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGTATAGATTGGAAGTTTaGAGGATGGAGGGGAATAAA +
Preference number: 4 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKYRLEV*RMEGNK
Trigger: TTTATTCCCCTCCATCCTCCAAACTTCCAATCTATA...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CCA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTATTTGTGCGTTTGAATaGATCCATGTGTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: NVISVTKKPASVPSSNISICAFE*IHVFSH
Trigger: ATGGCTAAACACATGGATCCATTCAAACGCACAAAT...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR TCA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTACTGAAGAGAATTTCCTaGAGCAATATTTGTCAGTAC +
Preference number: 4 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLLKRIS*SNICQY
Trigger: GTACTGACAAATATTGCTTCAGGAAATTCTCTTCAG...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR GCA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGCAAGCTGATTCAAACTaGAGTGTACAATTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKQADSN*SVQFSF
Trigger: AAAAGAGAATTGTACACTGCAGTTTGAATCAGCTTG...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR CAA 72 bp TTTCCTTCCGTGTCAATACTTTCCACATTTGTGCGTTaGAATGGATCCATGTGTTTAGCCATTATTTTACTA +
Preference number: 4 (lower is better)
Translates to: FPSVSILSTFVR*NGSMCLAIILL
Trigger: TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAGTATTGACACGGAAGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
3UTR CAA 72 bp AAATGTTTATTTAGCACTAGAGAAGTAAATTCAAAGTaGCCTGTGGGTAGACGTACAATAGAATTGGTTGAC +
Preference number: 4 (lower is better)
Translates to: KCLFSTREVNSK*PVGRRTIELVD
Trigger: GTCAACCAATTCTATTGTACGTCTACCCACAGGCAACTTTGAATTTACTTCTCTAGTGCTAAATAAACATTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS CCA 90 bp GCTCGCCCGCCCGCCGTGCCACTCCCGCGCACAACCTCGAAGAGCTaGCCCGCGCCTCGGCGGTGCTCACCAGGCCTCGCTCTCCGCCGC +
Preference number: 5 (lower is better)
Translates to: ARPPAVPLPRTTSKS*PAPRRCSPGLALRR
Trigger: GCGGCGGAGAGCGAGGCCTGGTGAGCACCGCCGAGGCGCGGGCCAGCTCTTCGAGGTTGTGCGCGGGAGTGGCACGGCGGGCGGGCGAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344337.11
ENST00000494339.5
CDS TCA 90 bp GAGGACTGTGGGCTCCACAAGAGGACTCGACTGGGTAGCCTGGTCTaGCACAGGTACGTGAAAGCAGAGTATTGCTTCAAAGCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: EDCGLHKRTRLGSLV*HRYVKAEYCFKAGN
Trigger: GTTTCCAGCTTTGAAGCAATACTCTGCTTTCACGTACCTGTGTCAGACCAGGCTACCCAGTCGAGTCCTCTTGTGGAGCCCACAGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344337.11
ENST00000466923.5
ENST00000470904.5
CDS CCA 90 bp ATTTGGATCAGGACTCTGTTGCTGGCCACTTTGCCGGTTCCACTCTaGTTCCTAGCAAATGCCAGGCTCACCTCCCTCTTCCTACAAAGC +
Preference number: 5 (lower is better)
Translates to: IWIRTLLLATLPVPL*FLANARLTSLFLQS
Trigger: GCTTTGTAGGAAGAGGGAGGTGAGCCTGGCATTTGCTAGGAACCAGAGTGGAACCGGCAAAGTGGCCAGCAACAGAGTCCTGATCCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466923.5
ENST00000470904.5
CDS CCA 90 bp ATTTGGATCAGGACTCTGTTGCTGGCCACTTTGCCGGTTCCACTCTaGTTCCTAGCAAATGCCAGGCTCACCTGCAGTGTACAATTCTCT +
Preference number: 5 (lower is better)
Translates to: IWIRTLLLATLPVPL*FLANARLTCSVQFS
Trigger: AGAGAATTGTACACTGCAGGTGAGCCTGGCATTTGCTAGGAACCAGAGTGGAACCGGCAAAGTGGCCAGCAACAGAGTCCTGATCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp TTGCAGGGCTCTTCCCCGCCCTTGGACAGCCATCTAAGTGTTGTAACCTTGGGGGCAACATTTCTCCGCTaGAATAACTGCTCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: LQGSSPPLDSHLSVVTLGATFLR*NNCSSL
Trigger: AAGAGAAGAGCAGTTATTCAAGCGGAGAAATGTTGC...CCCCAAGGTTACAACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCCCTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCACTGTTGCTGGCCACTTaGCCGGTTCCACTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: QPSSTRYLICSADPPEVALLLAT*PVPLWF
Trigger: GAACCAGAGTGGAACCGGCAAAGTGGCCAGCAACAG...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCAGTTTCCCACTCCAGGTaGAGGTACGCCTGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: QPSSTRYLICSADPPEVAVSHSR*RYAWFP
Trigger: AGGGAACCAGGCGTACCTCAACCTGGAGTGGGAAAC...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp AGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACTAGGTACTTGATCTGTGTTTCCCACTCCAGGTaGAGGTACGCCTGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: RRSQSGLIQPSSTRYLICVSHSR*RYAWFP
Trigger: AGGGAACCAGGCGTACCTCAACCTGGAGTGGGAAAC...ACAGATCAAGTACCTAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp AGATGGGCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAGGGCTGGGAAAATGTaGGCATCTATCACAGTCTGG +
Preference number: 5 (lower is better)
Translates to: RWAQLLPESQFGSEENFLRAGKM*ASITVW
Trigger: CCAGACTGTGATAGATGCCAACATTTTCCCAGCCCT...CAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS GCA 90 bp CCAGGCTCACCTCCCTCTTCCTACAAAGCATTTCAAATGATAAACTaGAGTAAGGTTCCTCATTTGGTCCCTCTGGTTCTCGGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PGSPPSSYKAFQMIN*SKVPHLVPLVLGRL
Trigger: CAACCTGCCGAGAACCAGAGGGACCAAATGAGGAACCTTACTGCAGTTTATCATTTGAAATGCTTTGTAGGAAGAGGGAGGTGAGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466923.5
ENST00000470904.5
CDS-3UTR CAA 90 bp AGCCTCAGGATATTTTCCAAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCTGGATCAGGACTCTGTaGCTGGCCACTTTGCCGGTT +
Preference number: 5 (lower is better)
Translates to: SLRIFSKPFRATCTILESWIRTL*LATLPV
Trigger: AACCGGCAAAGTGGCCAGCAACAGAGTCCTGATCCA...GGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTTGGAAAATATCCTGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp TACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCGACATGGAGAAACCTTaGCAAATTCTGGAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: YNLRVHDREEITERLDTTDMEKP*QILEVD
Trigger: GTCCACCTCCAGAATTTGCAAAGGTTTCTCCATGTC...GGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp TACAATCTTAGAGTCCATGACCGTGAGGAGATCACAGAGCGGCTTGATACAACCAGATCACAGAGCGGCTaGATACAACCCAGTTCTACT +
Preference number: 5 (lower is better)
Translates to: YNLRVHDREEITERLDTTRSQSG*IQPSST
Trigger: AGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCT...GGTTGTATCAAGCCGCTCTGTGATCTCCTCACGGTCATGGACTCTAAGATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp GAGGGGGAAGGATATTGCAGTCTAAGACATAGTCCCTGCACATGGTACTATCTCAGATCACAGAGCGGCTaGATACAACCCAGTTCTACT +
Preference number: 5 (lower is better)
Translates to: EGEGYCSLRHSPCTWYYLRSQSG*IQPSST
Trigger: AGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCT...GAGATAGTACCATGTGCAGGGACTATGTCTTAGACTGCAATATCCTTCCCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp TCTGGTTACCCTTTTATTAGAAGGGTATTCCACCACAGAGAGCCGGAGGTTTTCTACTGGAAGCGCCATTaGCAGGTACAGATTGCAGTC +
Preference number: 5 (lower is better)
Translates to: SGYPFIRRVFHHREPEVFYWKRH*QVQIAV
Trigger: GACTGCAATCTGTACCTGCAAATGGCGCTTCCAGTA...GAAAACCTCCGGCTCTCTGTGGTGGAATACCCTTCTAATAAAAGGGTAACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACGGCTCTTCCCCGCCCTaGGACAGCCATCTAAGTGTT +
Preference number: 5 (lower is better)
Translates to: VTKKPASVPSSNISELCYGSSPP*DSHLSV
Trigger: AACACTTAGATGGCTGTCCAAGGGCGGGGAAGAGCC...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp AGATGGGCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGGCAACATTTCTCCGCTaGAATAACTGCTCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: RWAQLLPESQFGSEENFLATFLR*NNCSSL
Trigger: AAGAGAAGAGCAGTTATTCAAGCGGAGAAATGTTGC...CAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp CAACCCAGTTCTACTAGGTACTTGATCTGTTCAGCTGATCCTCCAGAAGTTGCAGACATGGAGAAACCTTaGCAAATTCTGGAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: QPSSTRYLICSADPPEVADMEKP*QILEVD
Trigger: GTCCACCTCCAGAATTTGCAAAGGTTTCTCCATGTC...TGCAACTTCTGGAGGATCAGCTGAACAGATCAAGTACCTAGTAGAACTGGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTTGGATCAGGACTCTGTaGCTGGCCACTTTGCCGGTT +
Preference number: 5 (lower is better)
Translates to: KILMRAGKMLASITVWICWIRTL*LATLPV
Trigger: AACCGGCAAAGTGGCCAGCAACAGAGTCCTGATCCA...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS GCA 90 bp CTCTTTTCTGCTTTCGTAACTGCAGTCCTTCTTCCTCCCTCCTCCTaGGCATCTCATCGGGATTCAGAGATTTGTTCTTGTAACTTTTCA +
Preference number: 5 (lower is better)
Translates to: LFSAFVTAVLLPPSS*ASHRDSEICSCNFS
Trigger: TGAAAAGTTACAAGAACAAATCTCTGAATCCCGATGAGATGCGCAGGAGGAGGGAGGAAGAAGGACTGCAGTTACGAAAGCAGAAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344337.11
ENST00000465882.5
ENST00000476916.5
ENST00000482287.5
ENST00000485027.5
ENST00000493510.1
ENST00000494339.5
CDS CCA 90 bp GTGAACGTGATTATTTTTCAGGTGTCTGATGATCCTGGCCTTAGATaGGGACCAGAATTACAATCCAGGAGGCAGCTAGCAAAACAGAAC +
Preference number: 5 (lower is better)
Translates to: VNVIIFQVSDDPGLR*GPELQSRRQLAKQN
Trigger: GTTCTGTTTTGCTAGCTGCCTCCTGGATTGTAATTCTGGTCCCCATCTAAGGCCAGGATCATCAGACACCTGAAAAATAATCACGTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470904.5
CDS-3UTR CAA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAACAATTCTCTTTTCGTTaGAGGAACTCCACAAACCTG +
Preference number: 5 (lower is better)
Translates to: AQLLPESQFGSEENFLKQQFSFR*RNSTNL
Trigger: CAGGTTTGTGGAGTTCCTCAAACGAAAAGAGAATTG...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp AGATGGGCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGCAACATGCTTCCTTTTaGATAGATTCCTTTGGGCTA +
Preference number: 5 (lower is better)
Translates to: RWAQLLPESQFGSEENFLQHASF*IDSFGL
Trigger: TAGCCCAAAGGAATCTATCAAAAAGGAAGCATGTTG...CAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp GCACAGCTCCTGCCTGAATCACAATTCGGGTCTGAAGAGAATTTCCTGAAGCAAAGTTCTACTAGGTACTaGATCTGTTCAGCTGATCCT +
Preference number: 5 (lower is better)
Translates to: AQLLPESQFGSEENFLKQSSTRY*ICSADP
Trigger: AGGATCAGCTGAACAGATCAAGTACCTAGTAGAACT...TTGCTTCAGGAAATTCTCTTCAGACCCGAATTGTGATTCAGGCAGGAGCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp TCTGGTTACCCTTTTATTAGAAGGGTATTCCACCACAGAGAGCCGGAGGTTTTCCACCGAGAAGTCGTATaGAACTCATTTGCAGTTGTC +
Preference number: 5 (lower is better)
Translates to: SGYPFIRRVFHHREPEVFHREVV*NSFAVV
Trigger: GACAACTGCAAATGAGTTCAATACGACTTCTCGGTG...GAAAACCTCCGGCTCTCTGTGGTGGAATACCCTTCTAATAAAAGGGTAACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS CCA 90 bp GTGAACGTGATTATTTTTCAGGTGTCTGATGATCCTGGCCTTAGATaGGGACCAGAATTACAATCCAGGAGGCAGCTTTTCTGGATTTCT +
Preference number: 5 (lower is better)
Translates to: VNVIIFQVSDDPGLR*GPELQSRRQLFWIS
Trigger: AGAAATCCAGAAAAGCTGCCTCCTGGATTGTAATTCTGGTCCCCATCTAAGGCCAGGATCATCAGACACCTGAAAAATAATCACGTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466923.5
CDS-3UTR CAA 90 bp AGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACTAGGTACTTGATCTGTGCAACATTTCTCCGCTaGAATAACTGCTCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: RRSQSGLIQPSSTRYLICATFLR*NNCSSL
Trigger: AAGAGAAGAGCAGTTATTCAAGCGGAGAAATGTTGC...ACAGATCAAGTACCTAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp AGGAGATCACAGAGCGGCTTGATACAACCCAGTTCTACTAGGTACTTGATCTGTAGTTCTACTAGGTACTaGATCTGTTCAGCTGATCCT +
Preference number: 5 (lower is better)
Translates to: RRSQSGLIQPSSTRYLICSSTRY*ICSADP
Trigger: AGGATCAGCTGAACAGATCAAGTACCTAGTAGAACT...ACAGATCAAGTACCTAGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp GACTCAGAGCCAATAACCTTCATCTGTCATATGGAAGAAACAATCCTAGGGCAAAGATCACAGAGCGGCTaGATACAACCCAGTTCTACT +
Preference number: 5 (lower is better)
Translates to: DSEPITFICHMEETILGQRSQSG*IQPSST
Trigger: AGTAGAACTGGGTTGTATCAAGCCGCTCTGTGATCT...TTGCCCTAGGATTGTTTCTTCCATATGACAGATGAAGGTTATTGGCTCTGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp GCAAATTCTGGAGGTGGACTTTTCCCTCTACAGAGATTAGACAAAGCCCATACTCGTGAAAGCAGAGTATaGCTTCAAAGCTGGAAACCT +
Preference number: 5 (lower is better)
Translates to: ANSGGGLFPLQRLDKAHTRESRV*LQSWKP
Trigger: AGGTTTCCAGCTTTGAAGCAATACTCTGCTTTCACG...AGTATGGGCTTTGTCTAATCTCTGTAGAGGGAAAAGTCCACCTCCAGAATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485027.5
CDS-3UTR CAA 90 bp ATTCGAAATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACATTCAAGACACAGAATTaGCAGGGCTCTTCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: IRNPHTSNRNEPLPNSKTFKTQN*QGSSPP
Trigger: GGGCGGGGAAGAGCCCTGCAAATTCTGTGTCTTGAA...TGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATTTCGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGGAGATGTATAATAGCTaGTCAGGGGCAACTTCCAAA +
Preference number: 5 (lower is better)
Translates to: STLPKISQSNHIYLLVHQEMYNS*SGATSK
Trigger: TTTGGAAGTTGCCCCTGACAAGCTATTATACATCTC...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp AGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTGAATGCGTCACACTCTaGGCTGATAAATGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: RKSHQVIQGFTVEELMKSECVTL*ADKCPL
Trigger: CAAAGGACATTTATCAGCCAAGAGTGTGACGCATTC...ACTTTTCATGAGTTCTTCCACAGTGAACCCTTGGATTACCTGGTGGCTTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp GACTCAGAGCCAATAACCTTCATCTGTCATATGGAAGAAACAATCCTAGGGCAACAATTCTCTTTTCGTTaGAGGAACTCCACAAACCTG +
Preference number: 5 (lower is better)
Translates to: DSEPITFICHMEETILGQQFSFR*RNSTNL
Trigger: CAGGTTTGTGGAGTTCCTCAAACGAAAAGAGAATTG...TTGCCCTAGGATTGTTTCTTCCATATGACAGATGAAGGTTATTGGCTCTGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp TCTACCTTACCCAAAATTTCTCAATCCAACCACATCTACCTGCTGGTCCATCAGTTCCTGAAGCAATATTaGTCAGTACCCAAGCTGATT +
Preference number: 5 (lower is better)
Translates to: STLPKISQSNHIYLLVHQFLKQY*SVPKLI
Trigger: AATCAGCTTGGGTACTGACAAATATTGCTTCAGGAA...CTGATGGACCAGCAGGTAGATGTGGTTGGATTGAGAAATTTTGGGTAAGGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp AGCCTCAGGATATTTTCCAAGCCATTTAGGGCAACCTGTACAATCTTAGAGTCCTTCCTGAAGCAATATTaGTCAGTACCCAAGCTGATT +
Preference number: 5 (lower is better)
Translates to: SLRIFSKPFRATCTILESFLKQY*SVPKLI
Trigger: AATCAGCTTGGGTACTGACAAATATTGCTTCAGGAA...GGACTCTAAGATTGTACAGGTTGCCCTAAATGGCTTGGAAAATATCCTGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTAGGGCTGGGAAAATGTaGGCATCTATCACAGTCTGG +
Preference number: 5 (lower is better)
Translates to: NVISVTKKPASVPSSNISRAGKM*ASITVW
Trigger: CCAGACTGTGATAGATGCCAACATTTTCCCAGCCCT...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp AGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTGAAGTAAATTCAAAGTaGCCTGTGGGTAGACGTACA +
Preference number: 5 (lower is better)
Translates to: RKSHQVIQGFTVEELMKSEVNSK*PVGRRT
Trigger: TGTACGTCTACCCACAGGCAACTTTGAATTTACTTC...ACTTTTCATGAGTTCTTCCACAGTGAACCCTTGGATTACCTGGTGGCTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGACATGGAGAAACCTTaGCAAATTCTGGAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: NVISVTKKPASVPSSNISDMEKP*QILEVD
Trigger: GTCCACCTCCAGAATTTGCAAAGGTTTCTCCATGTC...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCCAACATGCTTCCTTTTaGATAGATTCCTTTGGGCTA +
Preference number: 5 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTQHASF*IDSFGL
Trigger: TAGCCCAAAGGAATCTATCAAAAAGGAAGCATGTTG...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp GTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTGAGTTATGCTACAGTTATAGATGGGAGTaGACTAGTTTTGCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: VTKKPASVPSSNISELCYSYRWE*TSFAVA
Trigger: AGCCACTGCAAAACTAGTCAACTCCCATCTATAACT...GTAGCATAACTCAGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp AAAATACTAATGAGGGCTGGGAAAATGTTGGCATCTATCACAGTCTGGATCTGTCAACATGCTTCCTTTTaGATAGATTCCTTTGGGCTA +
Preference number: 5 (lower is better)
Translates to: KILMRAGKMLASITVWICQHASF*IDSFGL
Trigger: TAGCCCAAAGGAATCTATCAAAAAGGAAGCATGTTG...ACAGATCCAGACTGTGATAGATGCCAACATTTTCCCAGCCCTCATTAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS-3UTR CAA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTCGTGAAAGCAGAGTATaGCTTCAAAGCTGGAAACCT +
Preference number: 5 (lower is better)
Translates to: NVISVTKKPASVPSSNISRESRV*LQSWKP
Trigger: AGGTTTCCAGCTTTGAAGCAATACTCTGCTTTCACG...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCGTTAAGCAGGTCATGTaGAGAAGATGGTTATTTCTT +
Preference number: 5 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTVKQVM*RRWLFL
Trigger: AAGAAATAACCATCTTCTCAACATGACCTGCTTAAC...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp TGCTACATTAAAGGAATCGTGTGCAGCATGAAAAGATTAGAATCGAGCTGCACCATTTGCAGGTACAGATaGCAGTCATCATTAAATGAG +
Preference number: 5 (lower is better)
Translates to: CYIKGIVCSMKRLESSCTICRYR*QSSLNE
Trigger: CTCATTTAATGATGACTGCAATCTGTACCTGCAAAT...GGTGCAGCTCGATTCTAATCTTTTCATGCTGCACACGATTCCTTTAATGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp AGAAAAAGCCACCAGGTAATCCAAGGGTTCACTGTGGAAGAACTCATGAAAAGTACATGTTACCTTAATTaGACCTACAGGGAAAACACT +
Preference number: 5 (lower is better)
Translates to: RKSHQVIQGFTVEELMKSTCYLN*TYRENT
Trigger: AGTGTTTTCCCTGTAGGTCAAATTAAGGTAACATGT...ACTTTTCATGAGTTCTTCCACAGTGAACCCTTGGATTACCTGGTGGCTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGAGTTCTACTAGGTACTaGATCTGTTCAGCTGATCCT +
Preference number: 5 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKSSTRY*ICSADP
Trigger: AGGATCAGCTGAACAGATCAAGTACCTAGTAGAACT...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp AATCCTCATACCAGCAACAGAAATGAACCACTTCCAAATTCTAAGACACAAAAGTTTTTAATGAGGACCTaGATCAGGACCACAAAGCCT +
Preference number: 5 (lower is better)
Translates to: NPHTSNRNEPLPNSKTQKFLMRT*IRTTKP
Trigger: AGGCTTTGTGGTCCTGATCAAGGTCCTCATTAAAAA...CTTTTGTGTCTTAGAATTTGGAAGTGGTTCATTTCTGTTGCTGGTATGAGGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp CTTTCCACATTTGTGCGTTTGAATGGATCCATGTGTTTAGCCATTATTTTACTACTAAGTGTTGTAACCTaGGGGCAAAGTAATTTCTCG +
Preference number: 5 (lower is better)
Translates to: LSTFVRLNGSMCLAIILLLSVVT*GQSNFS
Trigger: CGAGAAATTACTTTGCCCCAAGGTTACAACACTTAG...TAGTAAAATAATGGCTAAACACATGGATCCATTCAAACGCACAAATGTGGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS-3UTR CAA 90 bp AATGTCATTTCTGTTACCAAAAAGCCTGCTTCAGTACCAAGTTCCAACATATCTTCCACATTTGTGCGTTaGAATGGATCCATGTGTTTA +
Preference number: 5 (lower is better)
Translates to: NVISVTKKPASVPSSNISSTFVR*NGSMCL
Trigger: TAAACACATGGATCCATTCAAACGCACAAATGTGGA...AGATATGTTGGAACTTGGTACTGAAGCAGGCTTTTTGGTAACAGAAATGACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344337.11
CDS CCA 72 bp CCCGCCGTGCCACTCCCGCGCACAACCTCGAAGAGCTaGCCCGCGCCTCGGCGGTGCTCACCAGGCCTCGCT +
Preference number: 6 (lower is better)
Translates to: PAVPLPRTTSKS*PAPRRCSPGLA
Trigger: AGCGAGGCCTGGTGAGCACCGCCGAGGCGCGGGCCAGCTCTTCGAGGTTGTGCGCGGGAGTGGCACGGCGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344337.11
ENST00000494339.5
CDS CCA 72 bp AGGACTCTGTTGCTGGCCACTTTGCCGGTTCCACTCTaGTTCCTAGCAAATGCCAGGCTCACCTCCCTCTTC +
Preference number: 6 (lower is better)
Translates to: RTLLLATLPVPL*FLANARLTSLF
Trigger: GAAGAGGGAGGTGAGCCTGGCATTTGCTAGGAACCAGAGTGGAACCGGCAAAGTGGCCAGCAACAGAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466923.5
ENST00000470904.5
CDS CCA 72 bp AGGACTCTGTTGCTGGCCACTTTGCCGGTTCCACTCTaGTTCCTAGCAAATGCCAGGCTCACCTGCAGTGTA +
Preference number: 6 (lower is better)
Translates to: RTLLLATLPVPL*FLANARLTCSV
Trigger: TACACTGCAGGTGAGCCTGGCATTTGCTAGGAACCAGAGTGGAACCGGCAAAGTGGCCAGCAACAGAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485027.5
ENST00000494339.5
CDS TCA 72 bp GGGCTCCACAAGAGGACTCGACTGGGTAGCCTGGTCTaGCACAGGTACGTGAAAGCAGAGTATTGCTTCAAA +
Preference number: 6 (lower is better)
Translates to: GLHKRTRLGSLV*HRYVKAEYCFK
Trigger: TTTGAAGCAATACTCTGCTTTCACGTACCTGTGTCAGACCAGGCTACCCAGTCGAGTCCTCTTGTGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344337.11
ENST00000466923.5
ENST00000470904.5
CDS TCA 72 bp GGACTCGACTGGGTAGCCTGGTCTGACACAGGTACGTaGAAGCAGAGTATTGCTTCAAAGCTGGAAACCTTC +
Preference number: 6 (lower is better)
Translates to: GLDWVAWSDTGT*KQSIASKLETF
Trigger: GAAGGTTTCCAGCTTTGAAGCAATACTCTGCTTTCACGTACCTGTGTCAGACCAGGCTACCCAGTCGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344337.11
ENST00000466923.5
ENST00000470904.5
CDS CCA 72 bp GTTCTTGTAACTTTTCAGGCGAAAGTTCTCTTTTCCTaGGGTGGTCATGATTTCAGGCCTCGCTCTCCGCCG +
Preference number: 6 (lower is better)
Translates to: VLVTFQAKVLFS*GGHDFRPRSPP
Trigger: CGGCGGAGAGCGAGGCCTGAAATCATGACCACCCCAGGAAAAGAGAACTTTCGCCTGAAAAGTTACAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465882.5
ENST00000476916.5
CDS GCA 72 bp GCTTTCGTAACTGCAGTCCTTCTTCCTCCCTCCTCCTaGGCATCTCATCGGGATTCAGAGATTTGTTCTTGT +
Preference number: 6 (lower is better)
Translates to: AFVTAVLLPPSS*ASHRDSEICSC
Trigger: ACAAGAACAAATCTCTGAATCCCGATGAGATGCGCAGGAGGAGGGAGGAAGAAGGACTGCAGTTACGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344337.11
ENST00000465882.5
ENST00000476916.5
ENST00000482287.5
ENST00000485027.5
ENST00000493510.1
ENST00000494339.5
CDS CCA 72 bp GTTCTTGTAACTTTTCAGGCGAAAGTTCTCTTTTCCTaGGGTGGTCATGATTTCTCGAAGAGCTGGCCCGCG +
Preference number: 6 (lower is better)
Translates to: VLVTFQAKVLFS*GGHDFSKSWPA
Trigger: CGCGGGCCAGCTCTTCGAGAAATCATGACCACCCCAGGAAAAGAGAACTTTCGCCTGAAAAGTTACAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493510.1
CDS CAA 90 bp TCCTACAAAGCATTTCAAATGATAAACTGCAGTAAGGTTCCTCATTaGGTCCCTCTGGTTCTCGGCAGGTTGCTTAGGGGATCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: SYKAFQMINCSKVPH*VPLVLGRLLRGSGS
Trigger: AGAGCCTGATCCCCTAAGCAACCTGCCGAGAACCAGAGGGACCAAATGAGGAACCTTACTGCAGTTTATCATTTGAAATGCTTTGTAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466923.5
ENST00000470904.5
CDS CAA 72 bp GCATTTCAAATGATAAACTGCAGTAAGGTTCCTCATTaGGTCCCTCTGGTTCTCGGCAGGTTGCTTAGGGGA +
Preference number: 6 (lower is better)
Translates to: AFQMINCSKVPH*VPLVLGRLLRG
Trigger: TCCCCTAAGCAACCTGCCGAGAACCAGAGGGACCAAATGAGGAACCTTACTGCAGTTTATCATTTGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466923.5
ENST00000470904.5
CDS CCA 72 bp GTTCTTGTAACTTTTCAGGCGAAAGTTCTCTTTTCCTaGGGTGGTCATGATTTCAGGCTCAAGGCAACCGAT +
Preference number: 6 (lower is better)
Translates to: VLVTFQAKVLFS*GGHDFRLKATD
Trigger: ATCGGTTGCCTTGAGCCTGAAATCATGACCACCCCAGGAAAAGAGAACTTTCGCCTGAAAAGTTACAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344337.11
ENST00000494339.5
CDS CCA 72 bp ATTATTTTTCAGGTGTCTGATGATCCTGGCCTTAGATaGGGACCAGAATTACAATCCAGGAGGCAGCTAGCA +
Preference number: 6 (lower is better)
Translates to: IIFQVSDDPGLR*GPELQSRRQLA
Trigger: TGCTAGCTGCCTCCTGGATTGTAATTCTGGTCCCCATCTAAGGCCAGGATCATCAGACACCTGAAAAATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470904.5
CDS CCA 72 bp ATTATTTTTCAGGTGTCTGATGATCCTGGCCTTAGATaGGGACCAGAATTACAATCCAGGAGGCAGCTTTTC +
Preference number: 6 (lower is better)
Translates to: IIFQVSDDPGLR*GPELQSRRQLF
Trigger: GAAAAGCTGCCTCCTGGATTGTAATTCTGGTCCCCATCTAAGGCCAGGATCATCAGACACCTGAAAAATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466923.5
CDS CAA 72 bp AGAATTACAATCCAGGAGGCAGCTTTTCTGGATTTCTaGTTTTTCCTCTGGAAGGAACTCATCACCGCAACA +
Preference number: 6 (lower is better)
Translates to: RITIQEAAFLDF*FFLWKELITAT
Trigger: TGTTGCGGTGATGAGTTCCTTCCAGAGGAAAAACAAGAAATCCAGAAAAGCTGCCTCCTGGATTGTAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466923.5
CDS CAA 72 bp AATTTTTATAGCTGCATAGTCTCAGGGCCCAAGCCTTaGAGATTAGATCCTACAGGTGAGAATTTAGGGATC +
Preference number: 6 (lower is better)
Translates to: NFYSCIVSGPKP*RLDPTGENLGI
Trigger: GATCCCTAAATTCTCACCTGTAGGATCTAATCTCAAAGGCTTGGGCCCTGAGACTATGCAGCTATAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466923.5
CDS CAA 90 bp TACCTAACCAATTTTTATAGCTGCATAGTCTCAGGGCCCAAGCCTTaGAGATTAGATCCTACAGGTGAGAATTTAGGGATCACATGTATT +
Preference number: 6 (lower is better)
Translates to: YLTNFYSCIVSGPKP*RLDPTGENLGITCI
Trigger: AATACATGTGATCCCTAAATTCTCACCTGTAGGATCTAATCTCAAAGGCTTGGGCCCTGAGACTATGCAGCTATAAAAATTGGTTAGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466923.5