Pregenerated sensors for KLK8 (Homo sapiens)
Ensembl gene IDs: ENSG00000129455Ensembl transcript IDs: ENST00000291726.11, ENST00000320838.9, ENST00000347619.8, ENST00000391806.6, ENST00000593490.1, ENST00000594669.1, ENST00000594914.1, ENST00000595238.1, ENST00000598195.5, ENST00000599710.1, ENST00000600767.5
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGACGGTGCACTTCTGGCCAGGCTGGGTGCAATGATCTGCCAGGCTaGTGGGCTTCACTTTGGACCCCAGGGATGCCTGGTCACGCAGTT | + |
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Preference number: 1 (lower is better) Translates to: RRCTSGQAGCNDLPG*WASLWTPGMPGHAV Trigger: AACTGCGTGACCAGGCATCCCTGGGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATTGCACCCAGCCTGGCCAGAAGTGCACCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGGCCTCCAGAATCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCGACAGTGCCCCAGCCTaGGACGGTGCACTTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: QGASRIALARVSPFAAACDSAPA*DGALLA Trigger: GGCCAGAAGTGCACCGTCTCAGGCTGGGGCACTGTC...GCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGATTCTGGAGGCCCCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| 3UTR-3UTR GCA 90 bp | GAATCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCACAGACCATGCCACCCAGCCTGAGACGGTaGACTTCTGGCCAGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: ESPWHVSAPLLLPAQTMPPSLRR*TSGQAG Trigger: CCCAGCCTGGCCAGAAGTGCACCGTCTCAGGCTGGG...TGGCATGGTCTGTGCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGATTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGGCCTCCAGAATCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCAATGATCTGCCAGGCTaGTGGGCTTCACTTTGGACC | + |
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Preference number: 2 (lower is better) Translates to: QGASRIALARVSPFAAACNDLPG*WASLWT Trigger: GGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATT...GCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGATTCTGGAGGCCCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| 3UTR-3UTR TCA 90 bp | GCCCTTGCTGCCTATGATCTTCTTGATCCAGTCCAGGTAGCGGCAGATGTTGGTCCTCCCACAGGGGTCTaGGCCCCAGGATGTGATGCC | + |
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Preference number: 2 (lower is better) Translates to: ALAAYDLLDPVQVAADVGPPTGV*APGCDA Trigger: GGCATCACATCCTGGGGCTCAGACCCCTGTGGGAGG...ACCAACATCTGCCGCTACCTGGACTGGATCAAGAAGATCATAGGCAGCAAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000320838.9 ENST00000593490.1 |
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| 3UTR-3UTR GCA 90 bp | AATCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCACAGACCATGCCATTTTGGACCCCAGGGATaGCTGGTCACGCAGTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: NRPGTCQPLCCCLHRPCHFGPQG*LVTQLK Trigger: CTTCAACTGCGTGACCAGGCATCCCTGGGGTCCAAA...ATGGCATGGTCTGTGCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGGCCTCCAGAATCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCTTACTTCTGCACAGTTaGGAGTGTCAGGAAAATTCT | + |
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Preference number: 2 (lower is better) Translates to: QGASRIALARVSPFAAACLLLHS*ECQENS Trigger: AGAATTTTCCTGACACTCTCAACTGTGCAGAAGTAA...GCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGATTCTGGAGGCCCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| 3UTR-3UTR TCA 90 bp | GATCTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTTCTTGATCCACCTCCCACAGGGGTCTaGGCCCCAGGATGTGATGCC | + |
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Preference number: 2 (lower is better) Translates to: DLVLILESALAAYDLLDPPPTGV*APGCDA Trigger: GGCATCACATCCTGGGGCTCAGACCCCTGTGGGAGG...TGGATCAAGAAGATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000320838.9 ENST00000593490.1 |
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| 3UTR-3UTR CCA 90 bp | GATCTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTTCTTGATCCAGGTAGCGGCAGATGTTaGTATAGACGCCAGGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: DLVLILESALAAYDLLDPGSGRC*YRRQVC Trigger: ACAAACCTGGCGTCTATACCAACATCTGCCGCTACC...TGGATCAAGAAGATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320838.9 ENST00000593490.1 |
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| 3UTR-3UTR CCA 90 bp | TTTATTAAGGGAGATCTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATGGTAGCGGCAGATGTTaGTATAGACGCCAGGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: FIKGDLVLILESALAAYDGSGRC*YRRQVC Trigger: ACAAACCTGGCGTCTATACCAACATCTGCCGCTACC...ATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAGATCTCCCTTAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320838.9 ENST00000593490.1 |
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| 3UTR TCA 72 bp | ACTTCTGGCCAGGCTGGGTGCAATGATCTGCCAGGCTaGTGGGCTTCACTTTGGACCCCAGGGATGCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: TSGQAGCNDLPG*WASLWTPGMPG Trigger: ACCAGGCATCCCTGGGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATTGCACCCAGCCTGGCCAGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR GCA 90 bp | CAGGGGGCCTCCAGAATCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCGGTCCTCCACATCGCTaGTGTTGTAGCAGGGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: QGASRIALARVSPFAAACGPPHR*CCSRGV Trigger: CACACCCCTGCTACAACAGCAGCGATGTGGAGGACC...GCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGATTCTGGAGGCCCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR GCA 90 bp | CAGGGGGCCTCCAGAATCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCTGTCAGCCCCTTTGCTaGTGCCTGCACAGACCATGC | + |
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Preference number: 4 (lower is better) Translates to: QGASRIALARVSPFAAACCQPLC*CLHRPC Trigger: GCATGGTCTGTGCAGGCAGCAGCAAAGGGGCTGACA...GCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGATTCTGGAGGCCCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR TCA 90 bp | ATGATCTGCCAGGCTGATGGGCTTCACTTTGGACCCCAGGGATGCCTGGTCACGGACAGTGCCCCAGCCTaGGACGGTGCACTTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: MICQADGLHFGPQGCLVTDSAPA*DGALLA Trigger: GGCCAGAAGTGCACCGTCTCAGGCTGGGGCACTGTC...CGTGACCAGGCATCCCTGGGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR CCA 90 bp | TCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCACAGACCATGCCATCTCCTCCAGAATCGCCCTaGCACGTGTCAGCCCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SPWHVSAPLLLPAQTMPSPPESP*HVSAPL Trigger: CAAAGGGGCTGACACGTGCCAGGGCGATTCTGGAGG...AGATGGCATGGTCTGTGCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR TCA 90 bp | GGTGCAATGATCTGCCAGGCTGATGGGCTTCACTTTGGACCCCAGGGATGCCTGTCTCTCGGGGACTGGTaGCAGTGCCCCAGCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: GAMICQADGLHFGPQGCLSLGDW*QCPSLR Trigger: TCTCAGGCTGGGGCACTGTCACCAGTCCCCGAGAGA...CAGGCATCCCTGGGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATTGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR GCA 90 bp | GAATCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCACAGACCATGCCATGTGATGCCCTGGAGTaGACCATCACACACCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESPWHVSAPLLLPAQTMPCDALE*TITHQG Trigger: CCCCTGGTGTGTGATGGTGCACTCCAGGGCATCACA...TGGCATGGTCTGTGCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTGAGACGGTGCACTTCTGGCCAGGCTGGGTGCAATGATCTGCCAGGCGTTGTAGCAGGGGTGTaGGATGGACTGAACCACAGG | + |
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Preference number: 4 (lower is better) Translates to: PSLRRCTSGQAGCNDLPGVVAGV*DGLNHR Trigger: CCTGTGGTTCAGTCCATCCCACACCCCTGCTACAAC...GCCTGGCAGATCATTGCACCCAGCCTGGCCAGAAGTGCACCGTCTCAGGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR GCA 90 bp | CTGGCCAGGCTGGGTGCAATGATCTGCCAGGCTGATGGGCTTCACTTTGGACCCTTTGGACCCCAGGGATaGCTGGTCACGCAGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LARLGAMICQADGLHFGPFGPQG*LVTQLK Trigger: CTTCAACTGCGTGACCAGGCATCCCTGGGGTCCAAA...GGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATTGCACCCAGCCTGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR GCA 90 bp | TCTGCACAGTTGAGAGTGTCAGGAAAATTCTCTCGGGGACTGGTGACAGTGCCCCCCAGCCTGAGACGGTaGACTTCTGGCCAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SAQLRVSGKFSRGLVTVPPSLRR*TSGQAG Trigger: CCCAGCCTGGCCAGAAGTGCACCGTCTCAGGCTGGG...GGGCACTGTCACCAGTCCCCGAGAGAATTTTCCTGACACTCTCAACTGTGCAGA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR TCA 90 bp | AATCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCACAGACCATGCCATGCCTGGTCACGCAGTTaGAGAAGCATCAGATCATGG | + |
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Preference number: 4 (lower is better) Translates to: NRPGTCQPLCCCLHRPCHAWSRS*RSIRSW Trigger: CCATGATCTGATGCTTCTTCAACTGCGTGACCAGGC...ATGGCATGGTCTGTGCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR TCA 90 bp | CTGGCCAGGCTGGGTGCAATGATCTGCCAGGCTGATGGGCTTCACTTTGGACCCAATGATCTGCCAGGCTaGTGGGCTTCACTTTGGACC | + |
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Preference number: 4 (lower is better) Translates to: LARLGAMICQADGLHFGPNDLPG*WASLWT Trigger: GGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATT...GGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATTGCACCCAGCCTGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR TCA 90 bp | GGTGCAATGATCTGCCAGGCTGATGGGCTTCACTTTGGACCCCAGGGATGCCTGAGACCATGCCATCTGTaGTCTGCCCCGGGTAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: GAMICQADGLHFGPQGCLRPCHL*SAPGKH Trigger: ATGCTTACCCGGGGCAGATCACAGATGGCATGGTCT...CAGGCATCCCTGGGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR CCA 90 bp | TCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCACAGACCATGCCATCTTTATTCTGTAGGCTGTaGTCTCCCAGGCGTACTGTG | + |
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Preference number: 4 (lower is better) Translates to: SPWHVSAPLLLPAQTMPSLFCRL*SPRRTV Trigger: CACAGTACGCCTGGGAGACCACAGCCTACAGAATAA...AGATGGCATGGTCTGTGCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR CCA 90 bp | TCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCACAGACCATGCCATCTATCAGATCATGGTTGTaGTCCTCCACATCGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SPWHVSAPLLLPAQTMPSIRSWL*SSTSLL Trigger: CAGCAGCGATGTGGAGGACCACAACCATGATCTGAT...AGATGGCATGGTCTGTGCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR TCA 90 bp | GGTGCAATGATCTGCCAGGCTGATGGGCTTCACTTTGGACCCCAGGGATGCCTGGGGTGTGGGATGGACTaGACCACAGGTATTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GAMICQADGLHFGPQGCLGCGMD*TTGISC Trigger: GCAAGAAATACCTGTGGTTCAGTCCATCCCACACCC...CAGGCATCCCTGGGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATTGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR GCA 90 bp | CAGGGGGCCTCCAGAATCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCAAAGATTTTTACTTCTaGACAGTTGAGAGTGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: QGASRIALARVSPFAAACKDFYF*TVESVR Trigger: CCTGACACTCTCAACTGTGCAGAAGTAAAAATCTTT...GCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGATTCTGGAGGCCCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR GCA 90 bp | TCTGCACAGTTGAGAGTGTCAGGAAAATTCTCTCGGGGACTGGTGACAGTGCCCACGTGTCAGCCCCTTTaGTGCTGCCTGCACAGACCA | + |
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Preference number: 4 (lower is better) Translates to: SAQLRVSGKFSRGLVTVPTCQPL*CCLHRP Trigger: TGGTCTGTGCAGGCAGCAGCAAAGGGGCTGACACGT...GGGCACTGTCACCAGTCCCCGAGAGAATTTTCCTGACACTCTCAACTGTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR GCA 90 bp | TCTGCACAGTTGAGAGTGTCAGGAAAATTCTCTCGGGGACTGGTGACAGTGCCCCTGGGTGCAATGATCTaGCAGGCTGATGGGCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: SAQLRVSGKFSRGLVTVPLGAMI*QADGLH Trigger: GTGAAGCCCATCAGCCTGGCAGATCATTGCACCCAG...GGGCACTGTCACCAGTCCCCGAGAGAATTTTCCTGACACTCTCAACTGTGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR CCA 90 bp | GGTGCAATGATCTGCCAGGCTGATGGGCTTCACTTTGGACCCCAGGGATGCCTGAGAAGCATCAGATCATaGTTGTGGTCCTCCACATCG | + |
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Preference number: 4 (lower is better) Translates to: GAMICQADGLHFGPQGCLRSIRS*LWSSTS Trigger: CGATGTGGAGGACCACAACCATGATCTGATGCTTCT...CAGGCATCCCTGGGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATTGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR TCA 90 bp | GTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTTCTTGATCCAGTCCAGCTGAGCCCCAGGATGTaGTGCCCTGGAGTGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: VLILESALAAYDLLDPVQLSPRM*CPGVHH Trigger: ATGGTGCACTCCAGGGCATCACATCCTGGGGCTCAG...CTGGACTGGATCAAGAAGATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000320838.9 ENST00000593490.1 |
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| CDS-3UTR TCA 90 bp | CTGGCCAGGCTGGGTGCAATGATCTGCCAGGCTGATGGGCTTCACTTTGGACCCTTACTTCTGCACAGTTaGGAGTGTCAGGAAAATTCT | + |
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Preference number: 4 (lower is better) Translates to: LARLGAMICQADGLHFGPLLLHS*ECQENS Trigger: AGAATTTTCCTGACACTCTCAACTGTGCAGAAGTAA...GGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATTGCACCCAGCCTGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR TCA 90 bp | CTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTTCTTGATCCAGTCCTGAGCCCCAGGATGTaGTGCCCTGGAGTGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: LVLILESALAAYDLLDPVLSPRM*CPGVHH Trigger: ATGGTGCACTCCAGGGCATCACATCCTGGGGCTCAG...GACTGGATCAAGAAGATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000320838.9 ENST00000593490.1 |
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| CDS-3UTR GCA 90 bp | GTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTTCTTGATCCAGTCCAGTGTGATGCCCTGGAGTaGACCATCACACACCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VLILESALAAYDLLDPVQCDALE*TITHQG Trigger: CCCCTGGTGTGTGATGGTGCACTCCAGGGCATCACA...CTGGACTGGATCAAGAAGATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320838.9 ENST00000593490.1 |
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| CDS-3UTR CCA 90 bp | ATTAAGGGAGATCTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTTGGAACATCCACGTCTTaGCCGCACGAGGTCGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: IKGDLVLILESALAAYDLGTSTS*PHEVGG Trigger: GCCCCCGACCTCGTGCGGCCAAGACGTGGATGTTCC...AAGATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAGATCTCCCTTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000320838.9 ENST00000593490.1 |
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| CDS-3UTR CCA 90 bp | TCTGCACAGTTGAGAGTGTCAGGAAAATTCTCTCGGGGACTGGTGACAGTGCCCAGCAGGGGTGTGGGATaGACTGAACCACAGGTATTT | + |
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Preference number: 4 (lower is better) Translates to: SAQLRVSGKFSRGLVTVPSRGVG*TEPQVF Trigger: AAATACCTGTGGTTCAGTCCATCCCACACCCCTGCT...GGGCACTGTCACCAGTCCCCGAGAGAATTTTCCTGACACTCTCAACTGTGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR CCA 90 bp | GCCCTTGCTGCCTATGATCTTCTTGATCCAGTCCAGGTAGCGGCAGATGTTGGTGGTAGCGGCAGATGTTaGTATAGACGCCAGGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: ALAAYDLLDPVQVAADVGGSGRC*YRRQVC Trigger: ACAAACCTGGCGTCTATACCAACATCTGCCGCTACC...ACCAACATCTGCCGCTACCTGGACTGGATCAAGAAGATCATAGGCAGCAAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320838.9 ENST00000593490.1 |
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| CDS-3UTR TCA 90 bp | TTTATTAAGGGAGATCTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCCTCCCACAGGGGTCTaGGCCCCAGGATGTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: FIKGDLVLILESALAAYDPPTGV*APGCDA Trigger: GGCATCACATCCTGGGGCTCAGACCCCTGTGGGAGG...ATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAGATCTCCCTTAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000320838.9 ENST00000593490.1 |
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| CDS-3UTR GCA 90 bp | CTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTTCTTGATCCAGTCTCCTCCTTCTCCTCCTaGACTAGAGCCTGGGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LVLILESALAAYDLLDPVSSFSS*TRAWGA Trigger: AGCTCCCCAGGCTCTAGTGCAGGAGGAGAAGGAGGA...GACTGGATCAAGAAGATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320838.9 |
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| CDS-3UTR TCA 90 bp | TTTATTAAGGGAGATCTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATGGCGGGGTCACCTACTaGTTCGGACCCAGTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: FIKGDLVLILESALAAYDGGVTY*FGPSGG Trigger: TCCTCCACTGGGTCCGAATCAGTAGGTGACCCCGCC...ATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAGATCTCCCTTAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320838.9 |
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| CDS-3UTR GCA 90 bp | TCTGCACAGTTGAGAGTGTCAGGAAAATTCTCTCGGGGACTGGTGACAGTGCCCACCACAGGTATTTCTTaGTCTGGGCCATCTTTATTC | + |
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Preference number: 4 (lower is better) Translates to: SAQLRVSGKFSRGLVTVPTTGIS*SGPSLF Trigger: GAATAAAGATGGCCCAGAGCAAGAAATACCTGTGGT...GGGCACTGTCACCAGTCCCCGAGAGAATTTTCCTGACACTCTCAACTGTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS-3UTR CCA 90 bp | CTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTTCTTGATCCAGTCCTTCAGTTCTCTGCCTaGTACACGATTCTGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LVLILESALAAYDLLDPVLQFSA*YTILEP Trigger: AGGCTCCAGAATCGTGTACCAGGCAGAGAACTGAAG...GACTGGATCAAGAAGATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320838.9 |
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| CDS-3UTR CCA 90 bp | TTTATTAAGGGAGATCTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTGATTCGGACCCAGTaGAGGAGGCCCCAGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: FIKGDLVLILESALAAYDLIRTQ*RRPQYF Trigger: GAAGTACTGGGGCCTCCTCCACTGGGTCCGAATCAG...ATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAGATCTCCCTTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320838.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGAGTTGTGAGTTTATTAAGGGAGATCTAGTGCTTATCCTAGAATCAGCCCAGGATGTGATGCCCTaGAGTGCACCATCACACACC | + |
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Preference number: 4 (lower is better) Translates to: PESCEFIKGDLVLILESAQDVMP*SAPSHT Trigger: GGTGTGTGATGGTGCACTCCAGGGCATCACATCCTG...GGCTGATTCTAGGATAAGCACTAGATCTCCCTTAATAAACTCACAACTCTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320838.9 |
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| CDS-3UTR CCA 90 bp | ATTAAGGGAGATCTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTTCAGGATGTGATGCCCTaGAGTGCACCATCACACACC | + |
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Preference number: 4 (lower is better) Translates to: IKGDLVLILESALAAYDLQDVMP*SAPSHT Trigger: GGTGTGTGATGGTGCACTCCAGGGCATCACATCCTG...AAGATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAGATCTCCCTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320838.9 ENST00000593490.1 |
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| CDS-3UTR GCA 90 bp | GTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTTCTTGATCCAGTCCAGAGTACTTCAGTTCTCTaGCTGGTACACGATTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLILESALAAYDLLDPVQSTSVL*LVHDSG Trigger: TCCAGAATCGTGTACCAGGCAGAGAACTGAAGTACT...CTGGACTGGATCAAGAAGATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320838.9 |
||
| CDS-3UTR CCA 90 bp | ATTAAGGGAGATCTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTTCTGGAGCCTTTTAACTaGGAATCTCCACCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKGDLVLILESALAAYDLLEPFN*ESPPPA Trigger: AGCAGGAGGTGGAGATTCCCAGTTAAAAGGCTCCAG...AAGATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAGATCTCCCTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320838.9 |
||
| CDS-3UTR CCA 90 bp | CTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTTCTTGATCCAGTCCCTGGTACACGATTCTaGAGCCTTTTAACTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVLILESALAAYDLLDPVPGTRF*SLLTGN Trigger: ATTCCCAGTTAAAAGGCTCCAGAATCGTGTACCAGG...GACTGGATCAAGAAGATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320838.9 |
||
| CDS GCA 90 bp | CCTGCAGCAGGAGGGAGAGGGTTGGATCGCCACCCTCTGGGGCAGTaGGAGGGCTGGGAAGGCCACTGTGGGTTCAAATGGACACACGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAAGGRGLDRHPLGQ*EGWEGHCGFKWTHG Trigger: GCCGTGTGTCCATTTGAACCCACAGTGGCCTTCCCAGCCCTCGCACTGCCCCAGAGGGTGGCGATCCAACCCTCTCCCTCCTGCTGCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391806.6 ENST00000599710.1 |
||
| CDS CCA 90 bp | GGAGGGAGAGGGTTGGATCGCCACCCTCTGGGGCAGTGCGAGGGCTaGGAAGGCCACTGTGGGTTCAAATGGACACACGGCAAGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGRGLDRHPLGQCEG*EGHCGFKWTHGKFS Trigger: GGAGAACTTGCCGTGTGTCCATTTGAACCCACAGTGGCCTTCCCAGCCCTCGCACTGCCCCAGAGGGTGGCGATCCAACCCTCTCCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391806.6 ENST00000599710.1 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGCTGATGGGCTTCACTTTGGACCCCAGGGATGCCTGGTCACGCAGTTGCACGTGTCAGCCCCTTaGCTGCTGCCTGCACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: CQADGLHFGPQGCLVTQLHVSAP*LLPAQT Trigger: GGTCTGTGCAGGCAGCAGCAAAGGGGCTGACACGTG...CAACTGCGTGACCAGGCATCCCTGGGGTCCAAAGTGAAGCCCATCAGCCTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594669.1 |
||
| CDS-3UTR CAA 90 bp | CAGGGGGCCTCCAGAATCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCTGCCTGGTCACGCAGTaGAAGAAGCATCAGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: QGASRIALARVSPFAAACCLVTQ*KKHQIM Trigger: CATGATCTGATGCTTCTTCAACTGCGTGACCAGGCA...GCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGATTCTGGAGGCCCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000594669.1 |
||
| CDS-3UTR CAA 90 bp | CTGGCCAGGCTGGGTGCAATGATCTGCCAGGCTGATGGGCTTCACTTTGGACCCCTGATGGGCTTCACTTaGGACCCCAGGGATGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LARLGAMICQADGLHFGPLMGFT*DPRDAW Trigger: CCAGGCATCCCTGGGGTCCAAAGTGAAGCCCATCAG...GGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATTGCACCCAGCCTGGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594669.1 |
||
| CDS CCA 90 bp | CCTCTGGGGCAGTGCGAGGGCTGGGAAGGCCACTGTGGGTTCAAATaGACACACGGCAAGTTCTCCGCATACAACTTAGTGAGGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLGQCEGWEGHCGFK*THGKFSAYNLVRRS Trigger: GGACCTCCTCACTAAGTTGTATGCGGAGAACTTGCCGTGTGTCCATTTGAACCCACAGTGGCCTTCCCAGCCCTCGCACTGCCCCAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391806.6 ENST00000599710.1 |
||
| CDS CCA 90 bp | GGATCGCCACCCTCTGGGGCAGTGCGAGGGCTGGGAAGGCCACTGTaGGTTCAAATGGACACACGGCAAGTTCTCCGCATACAACTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSPPSGAVRGLGRPL*VQMDTRQVLRIQLS Trigger: ACTAAGTTGTATGCGGAGAACTTGCCGTGTGTCCATTTGAACCCACAGTGGCCTTCCCAGCCCTCGCACTGCCCCAGAGGGTGGCGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391806.6 ENST00000599710.1 |
||
| CDS-3UTR CAA 90 bp | GAATCGCCCTGGCACGTGTCAGCCCCTTTGCTGCTGCCTGCACAGACCATGCCAAGCATCAGATCATGGTaGTGGTCCTCCACATCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESPWHVSAPLLLPAQTMPSIRSW*WSSTSL Trigger: CAGCGATGTGGAGGACCACAACCATGATCTGATGCT...TGGCATGGTCTGTGCAGGCAGCAGCAAAGGGGCTGACACGTGCCAGGGCGATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594669.1 |
||
| CDS GCA 90 bp | AAGGCGGTACCGGTTCCCTCATCTGCCCTTCACCGCCCACCCGTTTaGTCTCCACTCATCTCACAGCTCAGGCAGAAAGAAGGTGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KAVPVPSSALHRPPV*SPLISQLRQKEGEV Trigger: AACCTCACCTTCTTTCTGCCTGAGCTGTGAGATGAGTGGAGAGCAAACGGGTGGGCGGTGAAGGGCAGATGAGGGAACCGGTACCGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000595238.1 ENST00000600767.5 |
||
| CDS TCA 90 bp | CTGATGGGCTTCACTTTGGACCCCAGGGATGCCTGGTCACGCAGTTaGAGAAGCATCAGATCATGGTTGTGGTCCTCCACATCGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LMGFTLDPRDAWSRS*RSIRSWLWSSTSLL Trigger: CAGCAGCGATGTGGAGGACCACAACCATGATCTGATGCTTCTTCAACTGCGTGACCAGGCATCCCTGGGGTCCAAAGTGAAGCCCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000291726.11 ENST00000391806.6 ENST00000594669.1 ENST00000600767.5 |
||
| CDS GCA 90 bp | GCAATGATCTGCCAGGCTGATGGGCTTCACTTTGGACCCCAGGGATaGCTGGTCACGCAGTTGAAGAAGCATCAGATCATGGTTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AMICQADGLHFGPQG*LVTQLKKHQIMVVV Trigger: GACCACAACCATGATCTGATGCTTCTTCAACTGCGTGACCAGGCATCCCTGGGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000291726.11 ENST00000391806.6 ENST00000594669.1 ENST00000600767.5 |
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| CDS CCA 90 bp | TGGAGGAGGCCCCAGTACTTCAGTTCTCTGCCTGGTACACGATTCTaGAGCCTTTTAACTGGGAATCTCCACCTCCTGCTCCTCCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: WRRPQYFSSLPGTRF*SLLTGNLHLLLLLL Trigger: AAGGAGGAGGAGCAGGAGGTGGAGATTCCCAGTTAAAAGGCTCCAGAATCGTGTACCAGGCAGAGAACTGAAGTACTGGGGCCTCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000291726.11 ENST00000320838.9 ENST00000347619.8 ENST00000600767.5 |
||
| CDS CCA 90 bp | GATTCGGACCCAGTGGAGGAGGCCCCAGTACTTCAGTTCTCTGCCTaGTACACGATTCTGGAGCCTTTTAACTGGGAATCTCCACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DSDPVEEAPVLQFSA*YTILEPFNWESPPP Trigger: AGGAGGTGGAGATTCCCAGTTAAAAGGCTCCAGAATCGTGTACCAGGCAGAGAACTGAAGTACTGGGGCCTCCTCCACTGGGTCCGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000291726.11 ENST00000320838.9 ENST00000347619.8 ENST00000600767.5 |
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| CDS CCA 90 bp | GGTGAGTCCCAATGTTTTCACTGTGAAGGAAGGCGAGGGGCTCTCTaGATTCTGGAGTCCCAAAGGGACAGCTTCATTGGAGGTCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GESQCFHCEGRRGAL*ILESQRDSFIGGPD Trigger: ATCTGGACCTCCAATGAAGCTGTCCCTTTGGGACTCCAGAATCCAGAGAGCCCCTCGCCTTCCTTCACAGTGAAAACATTGGGACTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598195.5 |
||
| CDS-3UTR CAA 90 bp | GATCTAGTGCTTATCCTAGAATCAGCCCTTGCTGCCTATGATCTTCTTGATCCAAGGAACATCCACGTCTaGGCCGCACGAGGTCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DLVLILESALAAYDLLDPRNIHV*AARGRG Trigger: CCCCCGACCTCGTGCGGCCAAGACGTGGATGTTCCT...TGGATCAAGAAGATCATAGGCAGCAAGGGCTGATTCTAGGATAAGCACTAGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320838.9 ENST00000593490.1 |
||
| CDS-3UTR CAA 90 bp | CTGGCCAGGCTGGGTGCAATGATCTGCCAGGCTGATGGGCTTCACTTTGGACCCAACCACAGGTATTTCTaGCTCTGGGCCATCTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: LARLGAMICQADGLHFGPNHRYF*LWAIFI Trigger: AATAAAGATGGCCCAGAGCAAGAAATACCTGTGGTT...GGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATTGCACCCAGCCTGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594669.1 |
||
| CDS CCA 90 bp | ATCATGGTTGTGGTCCTCCACATCGCTGCTGTTGTAGCAGGGGTGTaGGATGGACTGAACCACAGGTATTTCTTGCTCTGGGCCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IMVVVLHIAAVVAGV*DGLNHRYFLLWAIF Trigger: AAAGATGGCCCAGAGCAAGAAATACCTGTGGTTCAGTCCATCCCACACCCCTGCTACAACAGCAGCGATGTGGAGGACCACAACCATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000291726.11 ENST00000391806.6 ENST00000594669.1 ENST00000600767.5 |
||
| CDS-3UTR CAA 90 bp | CCAGAGAGTTGTGAGTTTATTAAGGGAGATCTAGTGCTTATCCTAGAATCAGCCAGGAACATCCACGTCTaGGCCGCACGAGGTCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PESCEFIKGDLVLILESARNIHV*AARGRG Trigger: CCCCCGACCTCGTGCGGCCAAGACGTGGATGTTCCT...GGCTGATTCTAGGATAAGCACTAGATCTCCCTTAATAAACTCACAACTCTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320838.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCCAGGCTGGGTGCAATGATCTGCCAGGCTGATGGGCTTCACTTTGGACCCTTTACTTCTGCACAGTaGAGAGTGTCAGGAAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LARLGAMICQADGLHFGPFTSAQ*RVSGKF Trigger: GAATTTTCCTGACACTCTCAACTGTGCAGAAGTAAA...GGGTCCAAAGTGAAGCCCATCAGCCTGGCAGATCATTGCACCCAGCCTGGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000594669.1 |
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| CDS GCA 90 bp | GCAGTTGAAGAAGCATCAGATCATGGTTGTGGTCCTCCACATCGCTaGTGTTGTAGCAGGGGTGTGGGATGGACTGAACCACAGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: AVEEASDHGCGPPHR*CCSRGVGWTEPQVF Trigger: AAATACCTGTGGTTCAGTCCATCCCACACCCCTGCTACAACAGCAGCGATGTGGAGGACCACAACCATGATCTGATGCTTCTTCAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000291726.11 ENST00000391806.6 ENST00000594669.1 ENST00000600767.5 |
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| CDS TCA 90 bp | ACCCGTTTGCTCTCCACTCATCTCACAGCTCAGGCAGAAAGAAGGTaGGGTTTCCCGCGTTTACTGAAAAATCATCCGTTGCATTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TRLLSTHLTAQAERR*GFPRLLKNHPLHWL Trigger: GAGCCAATGCAACGGATGATTTTTCAGTAAACGCGGGAAACCTCACCTTCTTTCTGCCTGAGCTGTGAGATGAGTGGAGAGCAAACGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000595238.1 ENST00000600767.5 |
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| CDS TCA 90 bp | AAAGATTTTTACTTCTGCACAGTTGAGAGTGTCAGGAAAATTCTTTaGTTTGCGAGCACGTGTGTTTCCACAGCCGCAAACTGTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KDFYFCTVESVRKIL*FASTCVSTAANCLI Trigger: GATGAGACAGTTTGCGGCTGTGGAAACACACGTGCTCGCAAATCAAAGAATTTTCCTGACACTCTCAACTGTGCAGAAGTAAAAATCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000598195.5 |
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| CDS CCA 72 bp | GGGTTGGATCGCCACCCTCTGGGGCAGTGCGAGGGCTaGGAAGGCCACTGTGGGTTCAAATGGACACACGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLDRHPLGQCEG*EGHCGFKWTHG Trigger: GCCGTGTGTCCATTTGAACCCACAGTGGCCTTCCCAGCCCTCGCACTGCCCCAGAGGGTGGCGATCCAACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391806.6 ENST00000599710.1 |
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| CDS GCA 72 bp | CAGTTGCCACCTACAAGGACACCGCCACAGAGTAGTTaGTGGCCCTGGAACAAGGCCGCCTGCCAAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QLPPTRTPPQSS*WPWNKAACQGC Trigger: GCAGCCTTGGCAGGCGGCCTTGTTCCAGGGCCAGCAACTACTCTGTGGCGGTGTCCTTGTAGGTGGCAACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000391806.6 ENST00000595238.1 ENST00000599710.1 ENST00000600767.5 |
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| CDS TCA 72 bp | ATAGACGCCAGGTTTGTCGGACCTCCCACAGGGGTCTaGGCCCCAGGATGTGATGCCCTGGAGTGCACCATC | + |
|
Preference number: 6 (lower is better) Translates to: IDARFVGPPTGV*APGCDALECTI Trigger: GATGGTGCACTCCAGGGCATCACATCCTGGGGCTCAGACCCCTGTGGGAGGTCCGACAAACCTGGCGTCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000291726.11 ENST00000320838.9 ENST00000347619.8 ENST00000391806.6 ENST00000593490.1 ENST00000594914.1 ENST00000598195.5 ENST00000600767.5 |
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| CDS GCA 72 bp | AAGGGGGAGTTGCAAGGCGGTACCGGTTCCCTCATCTaGCCTTCACCGCCCACCCGTTTGCTCTCCACTCAT | + |
|
Preference number: 6 (lower is better) Translates to: KGELQGGTGSLI*PSPPTRLLSTH Trigger: ATGAGTGGAGAGCAAACGGGTGGGCGGTGAAGGGCAGATGAGGGAACCGGTACCGCCTTGCAACTCCCCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000595238.1 ENST00000600767.5 |
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| CDS GCA 72 bp | CCGGTTCCCTCATCTGCCCTTCACCGCCCACCCGTTTaGTCTCCACTCATCTCACAGCTCAGGCAGAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PVPSSALHRPPV*SPLISQLRQKE Trigger: TTCTTTCTGCCTGAGCTGTGAGATGAGTGGAGAGCAAACGGGTGGGCGGTGAAGGGCAGATGAGGGAACCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000595238.1 ENST00000600767.5 |
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| CDS CAA 72 bp | ACCGGTTCCCTCATCTGCCCTTCACCGCCCACCCGTTaGCTCTCCACTCATCTCACAGCTCAGGCAGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: TGSLICPSPPTR*LSTHLTAQAER Trigger: TCTTTCTGCCTGAGCTGTGAGATGAGTGGAGAGCAAACGGGTGGGCGGTGAAGGGCAGATGAGGGAACCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000595238.1 ENST00000600767.5 |
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| CDS CAA 90 bp | GCTGATGGGCTTCACTTTGGACCCCAGGGATGCCTGGTCACGCAGTaGAAGAAGCATCAGATCATGGTTGTGGTCCTCCACATCGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ADGLHFGPQGCLVTQ*KKHQIMVVVLHIAA Trigger: AGCAGCGATGTGGAGGACCACAACCATGATCTGATGCTTCTTCAACTGCGTGACCAGGCATCCCTGGGGTCCAAAGTGAAGCCCATCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000291726.11 ENST00000391806.6 ENST00000594669.1 ENST00000600767.5 |
||
| CDS GCA 72 bp | TTCTGGGAACTGGAACATAGGGGTTTAAGGGGGAGTTaGAAGGCGGTACCGGTTCCCTCATCTGCCCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: FWELEHRGLRGS*KAVPVPSSALH Trigger: GTGAAGGGCAGATGAGGGAACCGGTACCGCCTTGCAACTCCCCCTTAAACCCCTATGTTCCAGTTCCCAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600767.5 |
||
| CDS CCA 72 bp | GTGGTCCTCCACATCGCTGCTGTTGTAGCAGGGGTGTaGGATGGACTGAACCACAGGTATTTCTTGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VVLHIAAVVAGV*DGLNHRYFLLW Trigger: CCAGAGCAAGAAATACCTGTGGTTCAGTCCATCCCACACCCCTGCTACAACAGCAGCGATGTGGAGGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000291726.11 ENST00000391806.6 ENST00000594669.1 ENST00000600767.5 |
||
| CDS CCA 72 bp | CAGTGCGAGGGCTGGGAAGGCCACTGTGGGTTCAAATaGACACACGGCAAGTTCTCCGCATACAACTTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QCEGWEGHCGFK*THGKFSAYNLV Trigger: CACTAAGTTGTATGCGGAGAACTTGCCGTGTGTCCATTTGAACCCACAGTGGCCTTCCCAGCCCTCGCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391806.6 ENST00000599710.1 |
||
| CDS CCA 72 bp | TTCACTGTGAAGGAAGGCGAGGGGCTCTCTGGATTCTaGAGTCCCAAAGGGACAGCTTCATTGGAGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FTVKEGEGLSGF*SPKGTASLEVQ Trigger: CTGGACCTCCAATGAAGCTGTCCCTTTGGGACTCCAGAATCCAGAGAGCCCCTCGCCTTCCTTCACAGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598195.5 |
||
| CDS GCA 72 bp | GAAGCATCAGATCATGGTTGTGGTCCTCCACATCGCTaGTGTTGTAGCAGGGGTGTGGGATGGACTGAACCA | + |
|
Preference number: 6 (lower is better) Translates to: EASDHGCGPPHR*CCSRGVGWTEP Trigger: TGGTTCAGTCCATCCCACACCCCTGCTACAACAGCAGCGATGTGGAGGACCACAACCATGATCTGATGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000291726.11 ENST00000391806.6 ENST00000594669.1 ENST00000600767.5 |
||
| CDS TCA 72 bp | TTCACTTTGGACCCCAGGGATGCCTGGTCACGCAGTTaGAGAAGCATCAGATCATGGTTGTGGTCCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: FTLDPRDAWSRS*RSIRSWLWSST Trigger: TGTGGAGGACCACAACCATGATCTGATGCTTCTTCAACTGCGTGACCAGGCATCCCTGGGGTCCAAAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000291726.11 ENST00000391806.6 ENST00000594669.1 ENST00000600767.5 |
||
| CDS GCA 72 bp | GAAGAGGTTGTAAGGTTCCCTGAGAGAGCAGCCCTTTaGCTCCATCCCTGTCTGGATCTAACCCCCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: EEVVRFPERAAL*LHPCLDLTPFL Trigger: AAGAAAGGGGGTTAGATCCAGACAGGGATGGAGGCAAAGGGCTGCTCTCTCAGGGAACCTTACAACCTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000594914.1 |
||
| CDS CAA 72 bp | CTCTCTGGATTCTGGAGTCCCAAAGGGACAGCTTCATaGGAGGTCCAGATTTTGGGGTCCAGAGTCAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSGFWSPKGTAS*EVQILGSRVKR Trigger: CCTCTTGACTCTGGACCCCAAAATCTGGACCTCCAATGAAGCTGTCCCTTTGGGACTCCAGAATCCAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598195.5 |
||
| CDS CAA 90 bp | GGCAGGGACCTGAATGCTGACTTTGCCACTTCCTGGAGAAGCTCCTaGACTCTCTTAGGTGAGTCCCAATGTTTTCACTGTGAAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRDLNADFATSWRSS*TLLGESQCFHCEGR Trigger: CCTTCCTTCACAGTGAAAACATTGGGACTCACCTAAGAGAGTCAAGGAGCTTCTCCAGGAAGTGGCAAAGTCAGCATTCAGGTCCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598195.5 |
||
| CDS CCA 72 bp | CAATGTTTTCACTGTGAAGGAAGGCGAGGGGCTCTCTaGATTCTGGAGTCCCAAAGGGACAGCTTCATTGGA | + |
|
Preference number: 6 (lower is better) Translates to: QCFHCEGRRGAL*ILESQRDSFIG Trigger: TCCAATGAAGCTGTCCCTTTGGGACTCCAGAATCCAGAGAGCCCCTCGCCTTCCTTCACAGTGAAAACATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598195.5 |
||
| CDS TCA 72 bp | CTCTCCACTCATCTCACAGCTCAGGCAGAAAGAAGGTaGGGTTTCCCGCGTTTACTGAAAAATCATCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSTHLTAQAERR*GFPRLLKNHPL Trigger: CAACGGATGATTTTTCAGTAAACGCGGGAAACCTCACCTTCTTTCTGCCTGAGCTGTGAGATGAGTGGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000595238.1 ENST00000600767.5 |
||
| CDS CAA 72 bp | TCTGCACAGTTGAGAGTGTCAGGAAAATTCTTTGATTaGCGAGCACGTGTGTTTCCACAGCCGCAAACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SAQLRVSGKFFD*RARVFPQPQTV Trigger: GACAGTTTGCGGCTGTGGAAACACACGTGCTCGCAAATCAAAGAATTTTCCTGACACTCTCAACTGTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598195.5 |
||
| CDS TCA 72 bp | CTCAGGCAGAAAGAAGGTGAGGTTTCCCGCGTTTACTaGAAAATCATCCGTTGCATTGGCTCTAAAGGTATC | + |
|
Preference number: 6 (lower is better) Translates to: LRQKEGEVSRVY*KIIRCIGSKGI Trigger: GATACCTTTAGAGCCAATGCAACGGATGATTTTTCAGTAAACGCGGGAAACCTCACCTTCTTTCTGCCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595238.1 ENST00000600767.5 |
||
| CDS CAA 90 bp | ATTTTTACTTCTGCACAGTTGAGAGTGTCAGGAAAATTCTTTGATTaGCGAGCACGTGTGTTTCCACAGCCGCAAACTGTCTCATCCAAA | + |
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Preference number: 6 (lower is better) Translates to: IFTSAQLRVSGKFFD*RARVFPQPQTVSSK Trigger: TTTGGATGAGACAGTTTGCGGCTGTGGAAACACACGTGCTCGCAAATCAAAGAATTTTCCTGACACTCTCAACTGTGCAGAAGTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000598195.5 |
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