RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL35 (Homo sapiens)

Ensembl gene IDs: ENSG00000149243

Ensembl transcript IDs: ENST00000376292.8, ENST00000460787.1, ENST00000527491.1, ENST00000539798.2, ENST00000624466.1

Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAAGCAGAGTGTGCATCTaGGCTCCGCCTGCCTCTCCG +
Preference number: 2 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPSRVCI*APPASP
Trigger: CGGAGAGGCAGGCGGAGCTCAGATGCACACTCTGCT...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
3UTR-3UTR GCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCATCTGAGCTCCGCCTaGCTCTCCGCCTCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVHLSSA*LSASWL
Trigger: GAGCCAGGAGGCGGAGAGGCAGGCGGAGCTCAGATG...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
3UTR-3UTR TCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGAGCAGAGTGTGCATCTaGGCTCCGCCTGCCTCTCCG +
Preference number: 2 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVSRVCI*APPASP
Trigger: CGGAGAGGCAGGCGGAGCTCAGATGCACACTCTGCT...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGACCTCGGCGAAGGCCTaGCGCAGGACGCGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLTSAKA*RRTRPQ
Trigger: CTGCGGCCGCGTCCTGCGTCAGGCCTTCGCCGAGGT...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTACCTCGGCGAAGGCCTaGCGCAGGACGCGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPTSAKA*RRTRPQ
Trigger: CTGCGGCCGCGTCCTGCGTCAGGCCTTCGCCGAGGT...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTGGCCGGGCTCGTGCCTaGCGCCTCGGGAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPGRARA*RLGSYW
Trigger: CCAGTAGCTCCCGAGGCGCCAGGCACGAGCCCGGCC...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR TCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTCGCGGCCCAGGATaGAGCAGGCGCGAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLPRGPG*SRREPR
Trigger: TCGAGGCTCGCGCCTGCTTCATCCTGGGCCGCGAGG...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTGCACCTTGTCCGTGTTaGCGCCGCCCTGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPAPCPC*RRPAWR
Trigger: GCGCCAGGCAGGGCGGCGTCAACACGGACAAGGTGC...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCACTCGCCGCAGGCCTaGAGCAGCTCGTCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLHSPQA*SSSSAS
Trigger: GGAGGCGGACGAGCTGCTGCAGGCCTGCGGCGAGTG...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGGTGTTGACGCCGCCCTaGCTGGCGCCCCCAATCACG +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLVLTPP*LAPPIT
Trigger: CGTGATTGGGGGCGCCAGGCAGGGCGGCGTCAACAC...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTTCCAGGAAGTCGGCGTaGCGCGCCACCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPSRKSA*RATSAK
Trigger: CTTCGCCGAGGTGGCGCGCCACGCCGACTTCCTGGA...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGTGTAGCCGGGCAGGCTaGGCAGTGGGGTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLCSRAG*AVGSTA
Trigger: AGCGGTGGACCCCACTGCCCAGCCTGCCCGGCTACA...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTTGTAGCCGGGCAGGCTaGGCAGTGGGGTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPCSRAG*AVGSTA
Trigger: AGCGGTGGACCCCACTGCCCAGCCTGCCCGGCTACA...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTGCAGCGCTGCAGGGATaGCTGGACCTCCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPAALQG*LDLHLP
Trigger: GGGCAGGTGGAGGTCCAGCCATCCCTGCAGCGCTGC...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGGCAGCGCTGCAGGGATaGCTGGACCTCCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLAALQG*LDLHLP
Trigger: GGGCAGGTGGAGGTCCAGCCATCCCTGCAGCGCTGC...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGGACTCCTCCGGCGCATaGCCTTGCCGCATCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLDSSGA*PCRILA
Trigger: GGCCAGGATGCGGCAAGGCCATGCGCCGGAGGAGTC...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR CCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCGCCTCGGGAGCTACTaGCACCACTGGCACCACGGC +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLRLGSY*HHWHHG
Trigger: GCCGTGGTGCCAGTGGTGCCAGTAGCTCCCGAGGCG...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR GCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGAGCCGTGGGAGCTGGTaGAGCGCTGCAGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLSRGSW*SAAGMA
Trigger: AGCCATCCCTGCAGCGCTGCACCAGCTCCCACGGCT...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCATCTGAGCTCCGCCTaGCTCTCCGCCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLHLSSA*LSASWL
Trigger: GAGCCAGGAGGCGGAGAGGCAGGCGGAGCTCAGATG...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTCATCTGAGCTCCGCCTaGCTCTCCGCCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPHLSSA*LSASWL
Trigger: GAGCCAGGAGGCGGAGAGGCAGGCGGAGCTCAGATG...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTTCCGGCGCATGGCCTTaGCGCATCCTGGCCATACCC +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPSGAWP*RILAIP
Trigger: GGGTATGGCCAGGATGCGGCAAGGCCATGCGCCGGA...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTGGCGCACCCAGCGCATaGCCGCTTCAAACACGGCCT +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPGAPSA*PLQTRP
Trigger: AGGCCGTGTTTGAAGCGGCCATGCGCTGGGTGCGCC...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTCGCTGCAGGGATGGCTaGACCTCCACCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPRCRDG*TSTCPL
Trigger: CAGTGGGCAGGTGGAGGTCCAGCCATCCCTGCAGCG...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCACAGCCGTGGGAGCTaGTGCAGCGCTGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLHSRGS*CSAAGM
Trigger: CATCCCTGCAGCGCTGCACCAGCTCCCACGGCTGTG...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGACAGGCGGCGAATTCTaGGCGAGTGTAGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLTGGEF*ASVAGQ
Trigger: CTGCCCGGCTACACTCGCTCAGAATTCGCCGCCTGT...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTACAGGCGGCGAATTCTaGGCGAGTGTAGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPTGGEF*ASVAGQ
Trigger: CTGCCCGGCTACACTCGCTCAGAATTCGCCGCCTGT...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTAGCAGAGTGTGCATCTaGGCTCCGCCTGCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPSRVCI*APPASP
Trigger: CGGAGAGGCAGGCGGAGCTCAGATGCACACTCTGCT...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTCCCACCGCGAACAGCTaGCCCTGCACAACTGCCATC +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPPTANS*PCTTAI
Trigger: GATGGCAGTTGTGCAGGGGCAGCTGTTCGCGGTGGG...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCCACCGCGAACAGCTaGCCCTGCACAACTGCCATC +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLPTANS*PCTTAI
Trigger: GATGGCAGTTGTGCAGGGGCAGCTGTTCGCGGTGGG...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTGGCTGGACCTCCACCTaGCCACTGCTGGGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPGWTST*PLLGSK
Trigger: CTTTGACCCCAGCAGTGGGCAGGTGGAGGTCCAGCC...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGTATCACTCCCGTTTGTaGCTGCCGCCCGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLYHSRL*LPPAPL
Trigger: CAGGGGTGCGGGCGGCAGGCACAAACGGGAGTGATA...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR TCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTTGCGTGGAGGTGCCATaGGGGAGCAGAGTGTGCATC +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPCVEVP*GSRVCI
Trigger: GATGCACACTCTGCTCCCTCATGGCACCTCCACGCA...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCAGGCAGGGCAGACTaGAGCTGGAACACAGACCCA +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLPGRAD*SWNTDP
Trigger: TGGGTCTGTGTTCCAGCTGCAGTCTGCCCTGCCTGG...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTGGCCTTGCCGCATCCTaGCCATACCCTCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPGLAAS*PYPLPS
Trigger: ACTTGGGAGAGGGTATGGCCAGGATGCGGCAAGGCC...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR TCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGGGTCGCAACCGCCGATaGCCACGATCACTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLGRNRR*PRSLQL
Trigger: TAGCTGAAGTGATCGTGGTCATCGGCGGTTGCGACC...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGAGACGTAGACGTCATTaGGGAGAGCACAGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLRRRRH*GEHRRR
Trigger: TCGCCGCCTGTGCTCTCCGCAATGACGTCTACGTCT...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTCTGCCCCTGCACAACTaGCATCTTGTGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPLPLHN*HLVPPP
Trigger: AGGTGGAGGCACAAGATGGCAGTTGTGCAGGGGCAG...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTCACCTGCCCAAGCTCTaGATGATGGTGACACAGCCG +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPHLPKL*MMVTQP
Trigger: CGGCTGTGTCACCATCATCCAGAGCTTGGGCAGGTG...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTTGCCTCTCCGCCTCCTaGCTCAGGCTGTCCAAATCT +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPCLSAS*LRLSKS
Trigger: AGATTTGGACAGCCTGAGCCAGGAGGCGGAGAGGCA...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCTCCACCTGCCCTTGTaGAGAGAGGCTACCTTGATC +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLLHLPL*REATLI
Trigger: GATCAAGGTAGCCTCTCTGCACAAGGGCAGGTGGAG...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGTCTTGTGCCTCCACCTaGCCTTGTGCAGAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLSCAST*PCAERL
Trigger: TAGCCTCTCTGCACAAGGGCAGGTGGAGGCACAAGA...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTACAACTGCCATCTTGTaGCTCCACCTGCCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPTTAIL*LHLPLC
Trigger: GCACAAGGGCAGGTGGAGGCACAAGATGGCAGTTGT...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCTGTTTGCGTGGAGGTaGCATGAGGGAGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLLFAWR*HEGAEC
Trigger: ACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTCTGTTTGCGTGGAGGTaGCATGAGGGAGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPLFAWR*HEGAEC
Trigger: ACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTGTGTTCATGCTGCTCTaGCCAGACTCCCGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPVFMLL*PDSRLL
Trigger: CAGCAAACGGGAGTCTGGGCAGAGCAGCATGAACAC...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTCTCCAGTGTTCATGCTaGTCTGCCCAGACTCCCGTT +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPLQCSC*SAQTPV
Trigger: AACGGGAGTCTGGGCAGAGCAGCATGAACACTGGAG...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR GCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCAAGTGCTCCGCAGCTaGTGCTCTCACAGGTATCAC +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLQVLRS*CSHRYH
Trigger: GTGATACCTGTGAGAGCAGCAGCTGCGGAGCACTTG...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR TCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTACACATCATGACTGTTaGTGTGGCCTCCGGAGACGT +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPTHHDC*CGLRRR
Trigger: ACGTCTCCGGAGGCCACATCAACAGTCATGATGTGT...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTCAGGCTGTCCAAATCTaGATCACCTGCCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPQAVQI*ITCPSS
Trigger: AGAGCTTGGGCAGGTGATTCAGATTTGGACAGCCTG...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAGCAGCACCACGTCGGTaGGGGTGCCGCTCCGCCGGT +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPAAPRR*GCRSAG
Trigger: ACCGGCGGAGCGGCACCCTCACCGACGTGGTGCTGC...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR GCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGACCTTGATCCAGGTGTaGAGATGGGAGCTAAACATC +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLTLIQV*RWELNI
Trigger: GATGTTTAGCTCCCATCTGCACACCTGGATCAAGGT...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTATCCAGGTGTGCAGATaGGAGCTAAACATCCACACA +
Preference number: 4 (lower is better)
Translates to: FAWRCHEGAECASELRLPIQVCR*ELNIHT
Trigger: TGTGTGGATGTTTAGCTCCCATCTGCACACCTGGAT...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCACTGAGCGCCGCGCGGTaGCACGGAAAGTCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPLSAAR*HGKSRP
Trigger: CGGGCGCGACTTTCCGTGCCACCGCGCGGCGCTCAG...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR TCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAGCACCTTGTCCGTGTTaGCGCCGCCCTGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPAPCPC*RRPAWR
Trigger: GCGCCAGGCAGGGCGGCGTCAACACGGACAAGGTGC...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAAGCTACTGGCACCACTaGCACCACGGCCGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPSYWHH*HHGRAA
Trigger: CGCGGCCCGGCCGTGGTGCCAGTGGTGCCAGTAGCT...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR GCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCACGGCCGCGAACAAGCTaGGGAAGTAGGCGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPRPRTS*GSRRCP
Trigger: CGGGCAGCGCCTACTTCCGCAGCTTGTTCGCGGCCG...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGGCAGCGCTAGGCTGTTaGCGGCGCGCAGGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVAALGC*RRAGGP
Trigger: AGGGCCGCCTGCGCGCCGCCAACAGCCTAGCGCTGC...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCATCCAGGAAGTCGGCGTaGCGCGCCACCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPSRKSA*RATSAK
Trigger: CTTCGCCGAGGTGGCGCGCCACGCCGACTTCCTGGA...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCACACATCTGTGCCTaGATCATAGGTGAAGATTTT +
Preference number: 4 (lower is better)
Translates to: LFAWRCHEGAECASELRLPHICA*IIGEDF
Trigger: AAAATCTTCACCTATGATCCAGGCACAGATGTGTGG...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAGAGCTGGTGCAGCGCTaGAGGGATGGCTGGACCTCC +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPELVQR*RDGWTS
Trigger: GGAGGTCCAGCCATCCCTGCAGCGCTGCACCAGCTC...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAGGCGCACCCAGCGCATaGCCGCTTCAAACACGGCCT +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPGAPSA*PLQTRP
Trigger: AGGCCGTGTTTGAAGCGGCCATGCGCTGGGTGCGCC...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCACGGCCGCCCAGGTGTTaGAGAAGGGGTCGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPRPPRC*RRGRSA
Trigger: AGCGCTACGACCCCTTCTCCAACACCTGGGCGGCCG...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCACGCTGCAGGGATGGCTaGACCTCCACCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPRCRDG*TSTCPL
Trigger: CAGTGGGCAGGTGGAGGTCCAGCCATCCCTGCAGCG...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCACAATCACGAAGAGCTTaGCCGCGCAGGACGCCACCG +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPQSRRA*PRRTPP
Trigger: CGGTGGCGTCCTGCGCGGGCAAGCTCTTCGTGATTG...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGGTGTTGACGCCGCCCTaGCTGGCGCCCCCAATCACG +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVVLTPP*LAPPIT
Trigger: CGTGATTGGGGGCGCCAGGCAGGGCGGCGTCAACAC...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAGGCTGGACCTCCACCTaGCCACTGCTGGGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPGWTST*PLLGSK
Trigger: CTTTGACCCCAGCAGTGGGCAGGTGGAGGTCCAGCC...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGACTCCCGTTTGTGCCTaGCGCCCGCACCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVTPVCA*RPHPWQ
Trigger: CTGCCAGGGGTGCGGGCGGCAGGCACAAACGGGAGT...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGTGCCGCCCGCACCCCTaGCAGCCCAAGCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVCRPHP*QPKLQC
Trigger: ACACTGGAGCTTGGGCTGCCAGGGGTGCGGGCGGCA...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGGAGCTGGTGCAGCGCTaGAGGGATGGCTGGACCTCC +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVELVQR*RDGWTS
Trigger: GGAGGTCCAGCCATCCCTGCAGCGCTGCACCAGCTC...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGAGCCGTGGGAGCTGGTaGAGCGCTGCAGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVSRGSW*SAAGMA
Trigger: AGCCATCCCTGCAGCGCTGCACCAGCTCCCACGGCT...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCACCAGGCAGGGCAGACTaGAGCTGGAACACAGACCCA +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPPGRAD*SWNTDP
Trigger: TGGGTCTGTGTTCCAGCTGCAGTCTGCCCTGCCTGG...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCACCACCGCTGGCTCTCTaGATGGTAGGCATCGGCGAA +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPPPLAL*MVGIGE
Trigger: TTCGCCGATGCCTACCATCCAGAGAGCCAGCGGTGG...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCGGCCGCCCAGGTGTTaGAGAAGGGGTCGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVRPPRC*RRGRSA
Trigger: AGCGCTACGACCCCTTCTCCAACACCTGGGCGGCCG...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCACGCCCGCCAAGGATGTaGACCTTCCCGTCACACACA +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPRPPRM*TFPSHT
Trigger: TGTGTGTGACGGGAAGGTCCACATCCTTGGCGGGCG...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCACAGCCGTGGGAGCTaGTGCAGCGCTGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVHSRGS*CSAAGM
Trigger: CATCCCTGCAGCGCTGCACCAGCTCCCACGGCTGTG...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAGGTCGCAACCGCCGATaGCCACGATCACTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPGRNRR*PRSLQL
Trigger: TAGCTGAAGTGATCGTGGTCATCGGCGGTTGCGACC...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGGCCCAGACTCCCGTTTaGTGTTCGCTCGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVAQTPV*CSLGLS
Trigger: GCTGAGCCCGAGCGAACAGCAAACGGGAGTCTGGGC...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR GCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAATACCCTCTCCCAAGTaGTCCGCAGCTGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPIPSPK*SAAAAL
Trigger: GAGAGCAGCAGCTGCGGAGCACTTGGGAGAGGGTAT...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR CCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCATCCACCGGTCCTCCTTaGGGTCAAAGCACTGCACCT +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPSTGPP*GQSTAP
Trigger: AGGTGCAGTGCTTTGACCCCAAGGAGGACCGGTGGA...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCACACCTGCCCAAGCTCTaGATGATGGTGACACAGCCG +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPHLPKL*MMVTQP
Trigger: CGGCTGTGTCACCATCATCCAGAGCTTGGGCAGGTG...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCATCCCGTCACACACAGTaGCTCCACAGCTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPSRHTQ*LHSFPQ
Trigger: CTGTGGAAAGCTGTGGAGTCACTGTGTGTGACGGGA...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGTGCGTGGAGGTGCCATaGGGGAGCAGAGTGTGCATC +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVCVEVP*GSRVCI
Trigger: GATGCACACTCTGCTCCCTCATGGCACCTCCACGCA...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCACCGCTGGCTCTCTaGATGGTAGGCATCGGCGAA +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVPPLAL*MVGIGE
Trigger: TTCGCCGATGCCTACCATCCAGAGAGCCAGCGGTGG...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCGCCCGCCAAGGATGTaGACCTTCCCGTCACACACA +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVRPPRM*TFPSHT
Trigger: TGTGTGTGACGGGAAGGTCCACATCCTTGGCGGGCG...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAACACATCATGACTGTTaGTGTGGCCTCCGGAGACGT +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPTHHDC*CGLRRR
Trigger: ACGTCTCCGGAGGCCACATCAACAGTCATGATGTGT...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCACAGGCTGTCCAAATCTaGATCACCTGCCCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPQAVQI*ITCPSS
Trigger: AGAGCTTGGGCAGGTGATTCAGATTTGGACAGCCTG...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCTGCCCCTGCACAACTaGCATCTTGTGCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVLPLHN*HLVPPP
Trigger: AGGTGGAGGCACAAGATGGCAGTTGTGCAGGGGCAG...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGGCGAACAGCTGCCCCTaGACAACTGCCATCTTGTGC +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVANSCP*TTAILC
Trigger: GCACAAGATGGCAGTTGTGCAGGGGCAGCTGTTCGC...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGGTGCTCCGCAGCTGCTaGTCTCACAGGTATCACTCC +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVVLRSC*SHRYHS
Trigger: GGAGTGATACCTGTGAGAGCAGCAGCTGCGGAGCAC...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGTCCACCGGTCCTCCTTaGGGTCAAAGCACTGCACCT +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVSTGPP*GQSTAP
Trigger: AGGTGCAGTGCTTTGACCCCAAGGAGGACCGGTGGA...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGTGCCTCTCCGCCTCCTaGCTCAGGCTGTCCAAATCT +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVCLSAS*LRLSKS
Trigger: AGATTTGGACAGCCTGAGCCAGGAGGCGGAGAGGCA...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAAACATCCACACATCATaGCTGTTGATGTGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPNIHTS*LLMWPP
Trigger: CGGAGGCCACATCAACAGTCATGATGTGTGGATGTT...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGTCCCGTCACACACAGTaGCTCCACAGCTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVSRHTQ*LHSFPQ
Trigger: CTGTGGAAAGCTGTGGAGTCACTGTGTGTGACGGGA...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCATGCTGGGGTCAAAGGTaGAGACCTTATCGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPCWGQR*RPYRCF
Trigger: AAAGCACCGATAAGGTCTTCACCTTTGACCCCAGCA...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGTCTTGTGCCTCCACCTaGCCTTGTGCAGAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVSCAST*PCAERL
Trigger: TAGCCTCTCTGCACAAGGGCAGGTGGAGGCACAAGA...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGAAGCTCCAGTGTTCATaGTGCTCTGCCCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVKLQCS*CSAQTP
Trigger: GGGAGTCTGGGCAGAGCAGCATGAACACTGGAGCTT...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR CCA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAATCCAGGTGTGCAGATaGGAGCTAAACATCCACACA +
Preference number: 4 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPIQVCR*ELNIHT
Trigger: TGTGTGGATGTTTAGCTCCCATCTGCACACCTGGAT...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR TCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGTGCTGGGGTCAAAGGTaGAGACCTTATCGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVCWGQR*RPYRCF
Trigger: AAAGCACCGATAAGGTCTTCACCTTTGACCCCAGCA...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR GCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGACCTTGATCCAGGTGTaGAGATGGGAGCTAAACATC +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVTLIQV*RWELNI
Trigger: GATGTTTAGCTCCCATCTGCACACCTGGATCAAGGT...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CCA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCACACATCTGTGCCTaGATCATAGGTGAAGATTTT +
Preference number: 4 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVPHICA*IIGEDF
Trigger: AAAATCTTCACCTATGATCCAGGCACAGATGTGTGG...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS TCA 90 bp GCCAGCTCCAGGAAGTCGGCGTGGCGCGCCACCTCGGCGAAGGCCTaGCGCAGGACGCGGCCGCAGCGCTCGGCCAGCGGGGCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: ASSRKSAWRATSAKA*RRTRPQRSASGASE
Trigger: CTCGCTGGCCCCGCTGGCCGAGCGCTGCGGCCGCGTCCTGCGTCAGGCCTTCGCCGAGGTGGCGCGCCACGCCGACTTCCTGGAGCTGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS CCA 90 bp GGGCCAGCGAGAAGGCGGCGGCCACGCGGCGCAGCGCTAGGCTGTTaGCGGCGCGCAGGCGGCCCTCGAGAAAGCGCACGCAGGCCTCGC +
Preference number: 5 (lower is better)
Translates to: GPARRRRPRGAALGC*RRAGGPRESARRPR
Trigger: GCGAGGCCTGCGTGCGCTTTCTCGAGGGCCGCCTGCGCGCCGCCAACAGCCTAGCGCTGCGCCGCGTGGCCGCCGCCTTCTCGCTGGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS TCA 90 bp GGTGGCACGGAAAGTCGCGCCCGCCGGCGCGCAGCACCACGTCGGTaGGGGTGCCGCTCCGCCGGTAGGCGTTCAGGGCCTGCAGCACGC +
Preference number: 5 (lower is better)
Translates to: GGTESRARRRAAPRR*GCRSAGRRSGPAAR
Trigger: GCGTGCTGCAGGCCCTGAACGCCTACCGGCGGAGCGGCACCCTCACCGACGTGGTGCTGCGCGCCGGCGGGCGCGACTTTCCGTGCCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS GCA 90 bp CCGCCCGCACCCCTGGCAGCCCAAGCTCCAGTGTTCATGCTGCTCTaGCCAGACTCCCGTTTGCTGTTCGCTCGGGCTCAGCTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: PPAPLAAQAPVFMLL*PDSRLLFARAQLRE
Trigger: CTCCCGCAGCTGAGCCCGAGCGAACAGCAAACGGGAGTCTGGGCAGAGCAGCATGAACACTGGAGCTTGGGCTGCCAGGGGTGCGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS GCA 90 bp CCACCGCGAACAGCTGCAAGTGAGGACATGGGCCGGGGAGCCGGGTaGCAGGGCCTTAGGGCCCTCGGCCTCATCGCTTCAGTCCTTACA +
Preference number: 5 (lower is better)
Translates to: PPRTAASEDMGRGAG*QGLRALGLIASVLT
Trigger: TGTAAGGACTGAAGCGATGAGGCCGAGGGCCCTAAGGCCCTGGCACCCGGCTCCCCGGCCCATGTCCTCACTTGCAGCTGTTCGCGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS CCA 90 bp GGAGAGCACAGGCGGCGAATTCTGAGCGAGTGTAGCCGGGCAGGCTaGGCAGTGGGGTCCACCGCTGGCTCTCTGGATGGTAGGCATCGG +
Preference number: 5 (lower is better)
Translates to: GEHRRRILSECSRAG*AVGSTAGSLDGRHR
Trigger: CCGATGCCTACCATCCAGAGAGCCAGCGGTGGACCCCACTGCCCAGCCTGCCCGGCTACACTCGCTCAGAATTCGCCGCCTGTGCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
CDS TCA 90 bp TCCGGAGACGTAGACGTCATTGCGGAGAGCACAGGCGGCGAATTCTaGGCGAGTGTAGCCGGGCAGGCTGGGCAGTGGGGTCCACCGCTG +
Preference number: 5 (lower is better)
Translates to: SGDVDVIAESTGGEF*ASVAGQAGQWGPPL
Trigger: CAGCGGTGGACCCCACTGCCCAGCCTGCCCGGCTACACTCGCTCAGAATTCGCCGCCTGTGCTCTCCGCAATGACGTCTACGTCTCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
CDS GCA 90 bp ACCCACCGCGAACAGCTTGTGTCCCAGGGCAGCCGCTGCAGCTCGTaGCTACCTGCCCCTGCACAACTGCCATCTTGTGCCTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: THREQLVSQGSRCSS*LPAPAQLPSCASTC
Trigger: GCAGGTGGAGGCACAAGATGGCAGTTGTGCAGGGGCAGGTAGGCACGAGCTGCAGCGGCTGCCCTGGGACACAAGCTGTTCGCGGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527491.1
CDS CCA 90 bp AGTGTAGCCGGGCAGGCTGGGCAGTGGGGTCCACCGCTGGCTCTCTaGATGGTAGGCATCGGCGAAGGGCAGCTTCAGGAGACCTTTGCG +
Preference number: 5 (lower is better)
Translates to: SVAGQAGQWGPPLAL*MVGIGEGQLQETFA
Trigger: CGCAAAGGTCTCCTGAAGCTGCCCTTCGCCGATGCCTACCATCCAGAGAGCCAGCGGTGGACCCCACTGCCCAGCCTGCCCGGCTACACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
CDS GCA 90 bp CCCAGGGCAGCCGCTGCAGCTCGTGCCTACCTGCCCCTGCACAACTaGCATCTTGTGCCTCCACCTGCCCTTGTGCAGAGAGGCTACCTT +
Preference number: 5 (lower is better)
Translates to: PRAAAAARAYLPLHN*HLVPPPALVQRGYL
Trigger: AAGGTAGCCTCTCTGCACAAGGGCAGGTGGAGGCACAAGATGGCAGTTGTGCAGGGGCAGGTAGGCACGAGCTGCAGCGGCTGCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460787.1
ENST00000527491.1
CDS GCA 90 bp CTGTCCCCAACCCAGTTTCAGGACCAAACTGACCCCCGAGCCCAGTaGTGCCACCACCTGGGCAGCCTCCACCCAGTTGCTGTACCTCCC +
Preference number: 5 (lower is better)
Translates to: LSPTQFQDQTDPRAQ*CHHLGSLHPVAVPP
Trigger: GGGAGGTACAGCAACTGGGTGGAGGCTGCCCAGGTGGTGGCAGCACTGGGCTCGGGGGTCAGTTTGGTCCTGAAACTGGGTTGGGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS GCA 90 bp CGAACAGCTTGTGTCCCAGGGCAGCCGCTGCAGCTCGTGCCTACCTaGCCCTGCACAACTGCCATCTTGTGCCTCCACCTGCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: RTACVPGQPLQLVPT*PCTTAILCLHLPLC
Trigger: GCACAAGGGCAGGTGGAGGCACAAGATGGCAGTTGTGCAGGGGCAGGTAGGCACGAGCTGCAGCGGCTGCCCTGGGACACAAGCTGTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527491.1
CDS GCA 90 bp TGCTCCGCAGCTGCTGCTCTCACAGGTATCACTCCCGTTTGTGCCTaGCGCCCGCACCCCTGGCAGCCCAAGCTCCAGTGTTCATGCTGC +
Preference number: 5 (lower is better)
Translates to: CSAAAALTGITPVCA*RPHPWQPKLQCSCC
Trigger: GCAGCATGAACACTGGAGCTTGGGCTGCCAGGGGTGCGGGCGGCAGGCACAAACGGGAGTGATACCTGTGAGAGCAGCAGCTGCGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS GCA 90 bp TTGCCGCATCCTGGCCATACCCTCTCCCAAGTGCTCCGCAGCTGCTaGTCTCACAGGTATCACTCCCGTTTGTGCCTGCCGCCCGCACCC +
Preference number: 5 (lower is better)
Translates to: LPHPGHTLSQVLRSC*SHRYHSRLCLPPAP
Trigger: GGGTGCGGGCGGCAGGCACAAACGGGAGTGATACCTGTGAGAGCAGCAGCTGCGGAGCACTTGGGAGAGGGTATGGCCAGGATGCGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS CCA 90 bp GCTCTCACAGGTATCACTCCCGTTTGTGCCTGCCGCCCGCACCCCTaGCAGCCCAAGCTCCAGTGTTCATGCTGCTCTGCCCAGACTCCC +
Preference number: 5 (lower is better)
Translates to: ALTGITPVCACRPHP*QPKLQCSCCSAQTP
Trigger: GGGAGTCTGGGCAGAGCAGCATGAACACTGGAGCTTGGGCTGCCAGGGGTGCGGGCGGCAGGCACAAACGGGAGTGATACCTGTGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR CAA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCTCCGGCGCATGGCCTaGCCGCATCCTGGCCATACC +
Preference number: 5 (lower is better)
Translates to: LFAWRCHEGAECASELRLLRRMA*PHPGHT
Trigger: GGTATGGCCAGGATGCGGCAAGGCCATGCGCCGGAG...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS TCA 90 bp GAGCTGGAAACTATCCCTGTCCCCAACCCAGTTTCAGGACCAAACTaGCCCCCGAGCCCAGTGCTGCCACCACCTGGGCAGCCTCCACCC +
Preference number: 5 (lower is better)
Translates to: ELETIPVPNPVSGPN*PPSPVLPPPGQPPP
Trigger: GGGTGGAGGCTGCCCAGGTGGTGGCAGCACTGGGCTCGGGGGTCAGTTTGGTCCTGAAACTGGGTTGGGGACAGGGATAGTTTCCAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS GCA 90 bp AAGCTCTGGATGATGGTGACACAGCCGTGGGAGCTGGTGCAGCGCTaGAGGGATGGCTGGACCTCCACCTGCCCACTGCTGGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: KLWMMVTQPWELVQR*RDGWTSTCPLLGSK
Trigger: CTTTGACCCCAGCAGTGGGCAGGTGGAGGTCCAGCCATCCCTGCAGCGCTGCACCAGCTCCCACGGCTGTGTCACCATCATCCAGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
ENST00000624466.1
CDS GCA 90 bp TCTGTACCTTGTGTCCCAGGGCAGCCGCTGCAGCTCGTGCCTACCTaGCCCTGCACAACTGCCATCTTGTGCCTCCACCTGCCCTTGTGC +
Preference number: 5 (lower is better)
Translates to: SVPCVPGQPLQLVPT*PCTTAILCLHLPLC
Trigger: GCACAAGGGCAGGTGGAGGCACAAGATGGCAGTTGTGCAGGGGCAGGTAGGCACGAGCTGCAGCGGCTGCCCTGGGACACAAGGTACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS GCA 90 bp CAAGTGCTCCGCAGCTGCTGCTCTCACAGGTATCACTCCCGTTTGTaGCTGCCGCCCGCACCCCTGGCAGCCCAAGCTCCAGTGTTCATG +
Preference number: 5 (lower is better)
Translates to: QVLRSCCSHRYHSRL*LPPAPLAAQAPVFM
Trigger: CATGAACACTGGAGCTTGGGCTGCCAGGGGTGCGGGCGGCAGGCACAAACGGGAGTGATACCTGTGAGAGCAGCAGCTGCGGAGCACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS-3UTR CAA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTCCAATCACGAAGAGCTaGCCCGCGCAGGACGCCACC +
Preference number: 5 (lower is better)
Translates to: FAWRCHEGAECASELRLPPITKS*PAQDAT
Trigger: GGTGGCGTCCTGCGCGGGCAAGCTCTTCGTGATTGG...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CAA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGAGGTATCACTCCCGTTaGTGCCTGCCGCCCGCACCC +
Preference number: 5 (lower is better)
Translates to: LFAWRCHEGAECASELRLRYHSR*CLPPAP
Trigger: GGGTGCGGGCGGCAGGCACAAACGGGAGTGATACCT...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS TCA 90 bp GCAGGGATGGCTGGACCTCCACCTGCCCACTGCTGGGGTCAAAGGTaGAGACCTTATCGGTGCTTTCTCCGCGATCATCCCGCCCGCCAA +
Preference number: 5 (lower is better)
Translates to: AGMAGPPPAHCWGQR*RPYRCFLRDHPARQ
Trigger: TTGGCGGGCGGGATGATCGCGGAGAAAGCACCGATAAGGTCTTCACCTTTGACCCCAGCAGTGGGCAGGTGGAGGTCCAGCCATCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
ENST00000624466.1
CDS GCA 90 bp CCGTGGGAGCTGGTGCAGCGCTGCAGGGATGGCTGGACCTCCACCTaGCCACTGCTGGGGTCAAAGGTGAAGACCTTATCGGTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PWELVQRCRDGWTST*PLLGSKVKTLSVLS
Trigger: AGAAAGCACCGATAAGGTCTTCACCTTTGACCCCAGCAGTGGGCAGGTGGAGGTCCAGCCATCCCTGCAGCGCTGCACCAGCTCCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
ENST00000624466.1
CDS GCA 90 bp TCCACAGATCTGTACCTTGTGTCCCAGGGCAGCCGCTGCAGCTCGTaGCTACCTGCCCCTGCACAACTGCCATCTTGTGCCTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: STDLYLVSQGSRCSS*LPAPAQLPSCASTC
Trigger: GCAGGTGGAGGCACAAGATGGCAGTTGTGCAGGGGCAGGTAGGCACGAGCTGCAGCGGCTGCCCTGGGACACAAGGTACAGATCTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS-3UTR CAA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCTCCACCGGTCCTCCTaGGGGTCAAAGCACTGCACC +
Preference number: 5 (lower is better)
Translates to: LFAWRCHEGAECASELRLLHRSS*GSKHCT
Trigger: GGTGCAGTGCTTTGACCCCAAGGAGGACCGGTGGAG...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CAA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTTGCCCAGACTCCCGTTaGCTGTTCGCTCGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: FAWRCHEGAECASELRLPCPDSR*LFARAQ
Trigger: CTGAGCCCGAGCGAACAGCAAACGGGAGTCTGGGCA...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS GCA 90 bp AAGCCACCCACCGCGAACAGCTGCCCCTGCACAACTGCCATCTTGTaGCTCCACCTGCCCTTGTGCAGAGAGGCTACCTTGATCCAGGTG +
Preference number: 5 (lower is better)
Translates to: KPPTANSCPCTTAIL*LHLPLCREATLIQV
Trigger: CACCTGGATCAAGGTAGCCTCTCTGCACAAGGGCAGGTGGAGGCACAAGATGGCAGTTGTGCAGGGGCAGCTGTTCGCGGTGGGTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS CCA 90 bp AATCTGAATCACCTGCCCAAGCTCTGGATGATGGTGACACAGCCGTaGGAGCTGGTGCAGCGCTGCAGGGATGGCTGGACCTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: NLNHLPKLWMMVTQP*ELVQRCRDGWTSTC
Trigger: GCAGGTGGAGGTCCAGCCATCCCTGCAGCGCTGCACCAGCTCCCACGGCTGTGTCACCATCATCCAGAGCTTGGGCAGGTGATTCAGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
ENST00000624466.1
CDS CCA 90 bp CCTCCTGGCTCAGGCTGTCCAAATCTGAATCACCTGCCCAAGCTCTaGATGATGGTGACACAGCCGTGGGAGCTGGTGCAGCGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PPGSGCPNLNHLPKL*MMVTQPWELVQRCR
Trigger: CCTGCAGCGCTGCACCAGCTCCCACGGCTGTGTCACCATCATCCAGAGCTTGGGCAGGTGATTCAGATTTGGACAGCCTGAGCCAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
ENST00000624466.1
CDS-3UTR CAA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTAGCTTCAGGAGACCTTaGCGGTCGCAACCGCCGATG +
Preference number: 5 (lower is better)
Translates to: FAWRCHEGAECASELRLPSFRRP*RSQPPM
Trigger: CATCGGCGGTTGCGACCGCAAAGGTCTCCTGAAGCT...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CAA 90 bp CTGTTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGTCAAAGCACTGCACCTaGTCCGTGTTGACGCCGCCC +
Preference number: 5 (lower is better)
Translates to: LFAWRCHEGAECASELRLSKHCT*SVLTPP
Trigger: GGGCGGCGTCAACACGGACAAGGTGCAGTGCTTTGA...CAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS TCA 90 bp TGCTGCCACCACCTGGGCAGCCTCCACCCAGTTGCTGTACCTCCCTaGGCCGGTTTCCTCTCATTTAGCGGGGATGAGACCTTAACCTGC +
Preference number: 5 (lower is better)
Translates to: CCHHLGSLHPVAVPP*AGFLSFSGDETLTC
Trigger: GCAGGTTAAGGTCTCATCCCCGCTAAATGAGAGGAAACCGGCTCAGGGAGGTACAGCAACTGGGTGGAGGCTGCCCAGGTGGTGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS-3UTR CAA 90 bp TTTGCGTGGAGGTGCCATGAGGGAGCAGAGTGTGCATCTGAGCTCCGCCTGCCTTGCACAACTGCCATCTaGTGCCTCCACCTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: FAWRCHEGAECASELRLPCTTAI*CLHLPL
Trigger: CAAGGGCAGGTGGAGGCACAAGATGGCAGTTGTGCA...AGGCAGGCGGAGCTCAGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS CCA 90 bp ACCTTATCGGTGCTTTCTCCGCGATCATCCCGCCCGCCAAGGATGTaGACCTTCCCGTCACACACAGTGACTCCACAGCTTTCCACAGGG +
Preference number: 5 (lower is better)
Translates to: TLSVLSPRSSRPPRM*TFPSHTVTPQLSTG
Trigger: CCCTGTGGAAAGCTGTGGAGTCACTGTGTGTGACGGGAAGGTCCACATCCTTGGCGGGCGGGATGATCGCGGAGAAAGCACCGATAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
CDS CCA 90 bp ACCTTATCGGTGCTTTCTCCGCGATCATCCCGCCCGCCAAGGATGTaGACCTTCCCGTCACACACAGTGACTCCACAGCTTTCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: TLSVLSPRSSRPPRM*TFPSHTVTPQLSWV
Trigger: CACCCAGGAAAGCTGTGGAGTCACTGTGTGTGACGGGAAGGTCCACATCCTTGGCGGGCGGGATGATCGCGGAGAAAGCACCGATAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS GCA 90 bp AGCTGCCCCTGCACAACTGCCATCTTGTGCCTCCACCTGCCCTTGTaGAGAGAGGCTACCTTGATCCAGGTGTGCAGATGGGAGCTAAAC +
Preference number: 5 (lower is better)
Translates to: SCPCTTAILCLHLPL*REATLIQVCRWELN
Trigger: GTTTAGCTCCCATCTGCACACCTGGATCAAGGTAGCCTCTCTGCACAAGGGCAGGTGGAGGCACAAGATGGCAGTTGTGCAGGGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS GCA 90 bp ACCTGCCCCTGCACAACTGCCATCTTGTGCCTCCACCTGCCCTTGTaGAGAGAGGCTACCTTGATCCAGGTGTGCAGATGGGAGCTAAAC +
Preference number: 5 (lower is better)
Translates to: TCPCTTAILCLHLPL*REATLIQVCRWELN
Trigger: GTTTAGCTCCCATCTGCACACCTGGATCAAGGTAGCCTCTCTGCACAAGGGCAGGTGGAGGCACAAGATGGCAGTTGTGCAGGGGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460787.1
ENST00000527491.1
CDS CCA 90 bp GTTACTAGCAGTGGCCTTCGGGGCAGGAGAGACCACAGGGTCATTTaGACCAAATCCCCACTCAAAGCTATAGCACTTGGGACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: VTSSGLRGRRDHRVI*TKSPLKAIALGTAG
Trigger: CCCTGCAGTCCCAAGTGCTATAGCTTTGAGTGGGGATTTGGTCCAAATGACCCTGTGGTCTCTCCTGCCCCGAAGGCCACTGCTAGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS TCA 90 bp GATCATCCCGCCCGCCAAGGATGTGGACCTTCCCGTCACACACAGTaGCTCCACAGCTTTCCTGGGTGGACAAACAGAAAGACAACTATC +
Preference number: 5 (lower is better)
Translates to: DHPARQGCGPSRHTQ*LHSFPGWTNRKTTI
Trigger: GATAGTTGTCTTTCTGTTTGTCCACCCAGGAAAGCTGTGGAGTCACTGTGTGTGACGGGAAGGTCCACATCCTTGGCGGGCGGGATGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS GCA 90 bp CCTCTGGACTCCCTTTGTCAAAAGCCTCCTCATCTTTCGAGGTCCTaGTCAAATGCCACCCCATCCTTAAAGGTCTCCCTGGTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: PLDSLCQKPPHLSRS*SNATPSLKVSLVFP
Trigger: GGGGAACACCAGGGAGACCTTTAAGGATGGGGTGGCATTTGAGCAGGACCTCGAAAGATGAGGAGGCTTTTGACAAAGGGAGTCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS CCA 90 bp AGAGCAGACCTTAGCAACTCCCTTCCCCACATCTTACCTCATGATTaGTTACTAGCAGTGGCCTTCGGGGCAGGAGAGACCACAGGGTCA +
Preference number: 5 (lower is better)
Translates to: RADLSNSLPHILPHD*LLAVAFGAGETTGS
Trigger: TGACCCTGTGGTCTCTCCTGCCCCGAAGGCCACTGCTAGTAACCAATCATGAGGTAAGATGTGGGGAAGGGAGTTGCTAAGGTCTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS CCA 90 bp TTAGGGCCCTCGGCCTCATCGCTTCAGTCCTTACAGTCTTTGAGCTaGAAACTATCCCTGTCCCCAACCCAGTTTCAGGACCAAACTGAC +
Preference number: 5 (lower is better)
Translates to: LGPSASSLQSLQSLS*KLSLSPTQFQDQTD
Trigger: GTCAGTTTGGTCCTGAAACTGGGTTGGGGACAGGGATAGTTTCCAGCTCAAAGACTGTAAGGACTGAAGCGATGAGGCCGAGGGCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS GCA 90 bp GGTCATTTGGACCAAATCCCCACTCAAAGCTATAGCACTTGGGACTaGAGGGTTCTAGGCTCTGCCTTAACAGGGCCTAGTTGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: GHLDQIPTQSYSTWD*RVLGSALTGPSCWP
Trigger: AGGCCAACAACTAGGCCCTGTTAAGGCAGAGCCTAGAACCCTGCAGTCCCAAGTGCTATAGCTTTGAGTGGGGATTTGGTCCAAATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS CCA 90 bp GATTACAGCCACTGCGCCCGGCCGACAGATTCTTTTATTCTTGAGTaGCACAGTCAAGATTCAAACCTAGACTCTATGGCCCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: DYSHCARPTDSFILE*HSQDSNLDSMAPEP
Trigger: GGGCTCTGGGGCCATAGAGTCTAGGTTTGAATCTTGACTGTGCCACTCAAGAATAAAAGAATCTGTCGGCCGGGCGCAGTGGCTGTAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS-3UTR CAA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAAGCTTCAGGAGACCTTaGCGGTCGCAACCGCCGATG +
Preference number: 5 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPSFRRP*RSQPPM
Trigger: CATCGGCGGTTGCGACCGCAAAGGTCTCCTGAAGCT...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CAA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCAATCACGAAGAGCTaGCCCGCGCAGGACGCCACC +
Preference number: 5 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVPITKS*PAQDAT
Trigger: GGTGGCGTCCTGCGCGGGCAAGCTCTTCGTGATTGG...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CAA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCATCAAAGCACTGCACCTaGTCCGTGTTGACGCCGCCC +
Preference number: 5 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPSKHCT*SVLTPP
Trigger: GGGCGGCGTCAACACGGACAAGGTGCAGTGCTTTGA...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS CCA 90 bp ACTCAAGCCAGAAATCTCACCTCTAAGGTCACCAAAGGTCAGAACTaGCAGAGACCTCCAGTCCAACCATATCTGTGTAGTCTCTGGAGT +
Preference number: 5 (lower is better)
Translates to: TQARNLTSKVTKGQN*QRPPVQPYLCSLWS
Trigger: ACTCCAGAGACTACACAGATATGGTTGGACTGGAGGTCTCTGCCAGTTCTGACCTTTGGTGACCTTAGAGGTGAGATTTCTGGCTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS-3UTR CAA 90 bp ATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCCATGCACAACTGCCATCTaGTGCCTCCACCTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: IYTRKGTIKLRAVCVEVPCTTAI*CLHLPL
Trigger: CAAGGGCAGGTGGAGGCACAAGATGGCAGTTGTGCA...TGGCACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CAA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGCTCCACCGGTCCTCCTaGGGGTCAAAGCACTGCACC +
Preference number: 5 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVLHRSS*GSKHCT
Trigger: GGTGCAGTGCTTTGACCCCAAGGAGGACCGGTGGAG...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS-3UTR CAA 90 bp TTTATTTATACAAGAAAAGGGACCATTAAGTTAAGGGCTGTTTGCGTGGAGGTGTGCAGAGAGGCTACCTaGATCCAGGTGTGCAGATGG +
Preference number: 5 (lower is better)
Translates to: FIYTRKGTIKLRAVCVEVCREAT*IQVCRW
Trigger: CCATCTGCACACCTGGATCAAGGTAGCCTCTCTGCA...CACCTCCACGCAAACAGCCCTTAACTTAATGGTCCCTTTTCTTGTATAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS TCA 72 bp GCCGGGTCCGCAGCGCACCGGCCTCGCGGCCCAGGATaGAGCAGGCGCGAGCCTCGAGCAGCAGCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: AGSAAHRPRGPG*SRREPRAAAGG
Trigger: GCCGCCCGCTGCTGCTCGAGGCTCGCGCCTGCTTCATCCTGGGCCGCGAGGCCGGTGCGCTGCGGACCCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
CDS CAA 90 bp GGGGCCAGCGAGAAGGCGGCGGCCACGCGGCGCAGCGCTAGGCTGTaGGCGGCGCGCAGGCGGCCCTCGAGAAAGCGCACGCAGGCCTCG +
Preference number: 6 (lower is better)
Translates to: GASEKAAATRRSARL*AARRRPSRKRTQAS
Trigger: CGAGGCCTGCGTGCGCTTTCTCGAGGGCCGCCTGCGCGCCGCCAACAGCCTAGCGCTGCGCCGCGTGGCCGCCGCCTTCTCGCTGGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS GCA 72 bp CGCCGCCCTGCCTGGCGCCCCCAATCACGAAGAGCTTaGCCGCGCAGGACGCCACCGCCGCCGAGCTCACGG +
Preference number: 6 (lower is better)
Translates to: RRPAWRPQSRRA*PRRTPPPPSSR
Trigger: CCGTGAGCTCGGCGGCGGTGGCGTCCTGCGCGGGCAAGCTCTTCGTGATTGGGGGCGCCAGGCAGGGCGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
CDS CCA 72 bp AGAAGGCGGCGGCCACGCGGCGCAGCGCTAGGCTGTTaGCGGCGCGCAGGCGGCCCTCGAGAAAGCGCACGC +
Preference number: 6 (lower is better)
Translates to: RRRRPRGAALGC*RRAGGPRESAR
Trigger: GCGTGCGCTTTCTCGAGGGCCGCCTGCGCGCCGCCAACAGCCTAGCGCTGCGCCGCGTGGCCGCCGCCTTCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS CAA 72 bp GAGAAGGCGGCGGCCACGCGGCGCAGCGCTAGGCTGTaGGCGGCGCGCAGGCGGCCCTCGAGAAAGCGCACG +
Preference number: 6 (lower is better)
Translates to: EKAAATRRSARL*AARRRPSRKRT
Trigger: CGTGCGCTTTCTCGAGGGCCGCCTGCGCGCCGCCAACAGCCTAGCGCTGCGCCGCGTGGCCGCCGCCTTCTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS TCA 72 bp GAAAGTCGCGCCCGCCGGCGCGCAGCACCACGTCGGTaGGGGTGCCGCTCCGCCGGTAGGCGTTCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: ESRARRRAAPRR*GCRSAGRRSGP
Trigger: AGGCCCTGAACGCCTACCGGCGGAGCGGCACCCTCACCGACGTGGTGCTGCGCGCCGGCGGGCGCGACTTTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS CAA 72 bp ACGCCGCCCTGCCTGGCGCCCCCAATCACGAAGAGCTaGCCCGCGCAGGACGCCACCGCCGCCGAGCTCACG +
Preference number: 6 (lower is better)
Translates to: TPPCLAPPITKS*PAQDATAAELT
Trigger: CGTGAGCTCGGCGGCGGTGGCGTCCTGCGCGGGCAAGCTCTTCGTGATTGGGGGCGCCAGGCAGGGCGGCGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
CDS CAA 90 bp TCCGTGTTGACGCCGCCCTGCCTGGCGCCCCCAATCACGAAGAGCTaGCCCGCGCAGGACGCCACCGCCGCCGAGCTCACGGCCTCCGGG +
Preference number: 6 (lower is better)
Translates to: SVLTPPCLAPPITKS*PAQDATAAELTASG
Trigger: CCCGGAGGCCGTGAGCTCGGCGGCGGTGGCGTCCTGCGCGGGCAAGCTCTTCGTGATTGGGGGCGCCAGGCAGGGCGGCGTCAACACGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
CDS GCA 72 bp GCCTCGAGCAGCAGCGGGCGGCACTCGCCGCAGGCCTaGAGCAGCTCGTCCGCCTCCACCTTCTCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: ASSSSGRHSPQA*SSSSASTFSRK
Trigger: CTTCCTGGAGAAGGTGGAGGCGGACGAGCTGCTGCAGGCCTGCGGCGAGTGCCGCCCGCTGCTGCTCGAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
CDS CCA 72 bp GGCGCTTCGCAGCCCGGCTCCGACTCCTCCGGCGCATaGCCTTGCCGCATCCTGGCCATACCCTCTCCCAAG +
Preference number: 6 (lower is better)
Translates to: GASQPGSDSSGA*PCRILAIPSPK
Trigger: CTTGGGAGAGGGTATGGCCAGGATGCGGCAAGGCCATGCGCCGGAGGAGTCGGAGCCGGGCTGCGAAGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS GCA 72 bp ACAGCTGCAAGTGAGGACATGGGCCGGGGAGCCGGGTaGCAGGGCCTTAGGGCCCTCGGCCTCATCGCTTCA +
Preference number: 6 (lower is better)
Translates to: TAASEDMGRGAG*QGLRALGLIAS
Trigger: TGAAGCGATGAGGCCGAGGGCCCTAAGGCCCTGGCACCCGGCTCCCCGGCCCATGTCCTCACTTGCAGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS CCA 72 bp GGGCAGGCTGGGCAGTGGGGTCCACCGCTGGCTCTCTaGATGGTAGGCATCGGCGAAGGGCAGCTTCAGGAG +
Preference number: 6 (lower is better)
Translates to: GQAGQWGPPLAL*MVGIGEGQLQE
Trigger: CTCCTGAAGCTGCCCTTCGCCGATGCCTACCATCCAGAGAGCCAGCGGTGGACCCCACTGCCCAGCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
CDS CCA 72 bp AGGCGGCGAATTCTGAGCGAGTGTAGCCGGGCAGGCTaGGCAGTGGGGTCCACCGCTGGCTCTCTGGATGGT +
Preference number: 6 (lower is better)
Translates to: RRRILSECSRAG*AVGSTAGSLDG
Trigger: ACCATCCAGAGAGCCAGCGGTGGACCCCACTGCCCAGCCTGCCCGGCTACACTCGCTCAGAATTCGCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
CDS GCA 72 bp TCAAAGCACTGCACCTTGTCCGTGTTGACGCCGCCCTaGCTGGCGCCCCCAATCACGAAGAGCTTGCCCGCG +
Preference number: 6 (lower is better)
Translates to: SKHCTLSVLTPP*LAPPITKSLPA
Trigger: CGCGGGCAAGCTCTTCGTGATTGGGGGCGCCAGGCAGGGCGGCGTCAACACGGACAAGGTGCAGTGCTTTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
CDS GCA 72 bp ATGATGGTGACACAGCCGTGGGAGCTGGTGCAGCGCTaGAGGGATGGCTGGACCTCCACCTGCCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: MMVTQPWELVQR*RDGWTSTCPLL
Trigger: CAGCAGTGGGCAGGTGGAGGTCCAGCCATCCCTGCAGCGCTGCACCAGCTCCCACGGCTGTGTCACCATCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
ENST00000624466.1
CDS GCA 72 bp CCGCACCCCTGGCAGCCCAAGCTCCAGTGTTCATGCTaGTCTGCCCAGACTCCCGTTTGCTGTTCGCTCGGG +
Preference number: 6 (lower is better)
Translates to: PHPWQPKLQCSC*SAQTPVCCSLG
Trigger: CCCGAGCGAACAGCAAACGGGAGTCTGGGCAGAGCAGCATGAACACTGGAGCTTGGGCTGCCAGGGGTGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS GCA 72 bp CGCCCGCACCCCTGGCAGCCCAAGCTCCAGTGTTCATaGTGCTCTGCCCAGACTCCCGTTTGCTGTTCGCTC +
Preference number: 6 (lower is better)
Translates to: RPHPWQPKLQCS*CSAQTPVCCSL
Trigger: GAGCGAACAGCAAACGGGAGTCTGGGCAGAGCAGCATGAACACTGGAGCTTGGGCTGCCAGGGGTGCGGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS GCA 72 bp GCTGCTGCTCTCACAGGTATCACTCCCGTTTGTGCCTaGCGCCCGCACCCCTGGCAGCCCAAGCTCCAGTGT +
Preference number: 6 (lower is better)
Translates to: AAALTGITPVCA*RPHPWQPKLQC
Trigger: ACACTGGAGCTTGGGCTGCCAGGGGTGCGGGCGGCAGGCACAAACGGGAGTGATACCTGTGAGAGCAGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS CCA 72 bp CACCTGCCCAAGCTCTGGATGATGGTGACACAGCCGTaGGAGCTGGTGCAGCGCTGCAGGGATGGCTGGACC +
Preference number: 6 (lower is better)
Translates to: HLPKLWMMVTQP*ELVQRCRDGWT
Trigger: GGTCCAGCCATCCCTGCAGCGCTGCACCAGCTCCCACGGCTGTGTCACCATCATCCAGAGCTTGGGCAGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
ENST00000624466.1
CDS CCA 72 bp GGTATCACTCCCGTTTGTGCCTGCCGCCCGCACCCCTaGCAGCCCAAGCTCCAGTGTTCATGCTGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: GITPVCACRPHP*QPKLQCSCCSA
Trigger: GGCAGAGCAGCATGAACACTGGAGCTTGGGCTGCCAGGGGTGCGGGCGGCAGGCACAAACGGGAGTGATACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS CAA 90 bp ACCCCCGAGCCCAGTGCTGCCACCACCTGGGCAGCCTCCACCCAGTaGCTGTACCTCCCTGAGCCGGTTTCCTCTCATTTAGCGGGGATG +
Preference number: 6 (lower is better)
Translates to: TPEPSAATTWAASTQ*LYLPEPVSSHLAGM
Trigger: CATCCCCGCTAAATGAGAGGAAACCGGCTCAGGGAGGTACAGCAACTGGGTGGAGGCTGCCCAGGTGGTGGCAGCACTGGGCTCGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS GCA 72 bp ACCCAGTTTCAGGACCAAACTGACCCCCGAGCCCAGTaGTGCCACCACCTGGGCAGCCTCCACCCAGTTGCT +
Preference number: 6 (lower is better)
Translates to: TQFQDQTDPRAQ*CHHLGSLHPVA
Trigger: AGCAACTGGGTGGAGGCTGCCCAGGTGGTGGCAGCACTGGGCTCGGGGGTCAGTTTGGTCCTGAAACTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS TCA 72 bp GCCCGCCAAGGATGTGGACCTTCCCGTCACACACAGTaGCTCCACAGCTTTCCACAGGGCTGGGGAGGACAG +
Preference number: 6 (lower is better)
Translates to: ARQGCGPSRHTQ*LHSFPQGWGGQ
Trigger: CTGTCCTCCCCAGCCCTGTGGAAAGCTGTGGAGTCACTGTGTGTGACGGGAAGGTCCACATCCTTGGCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
CDS GCA 72 bp CTGGTGCAGCGCTGCAGGGATGGCTGGACCTCCACCTaGCCACTGCTGGGGTCAAAGGTGAAGACCTTATCG +
Preference number: 6 (lower is better)
Translates to: LVQRCRDGWTST*PLLGSKVKTLS
Trigger: CGATAAGGTCTTCACCTTTGACCCCAGCAGTGGGCAGGTGGAGGTCCAGCCATCCCTGCAGCGCTGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
ENST00000624466.1
CDS GCA 72 bp CCTGGCCATACCCTCTCCCAAGTGCTCCGCAGCTGCTaGTCTCACAGGTATCACTCCCGTTTGTGCCTGCCG +
Preference number: 6 (lower is better)
Translates to: PGHTLSQVLRSC*SHRYHSRLCLP
Trigger: CGGCAGGCACAAACGGGAGTGATACCTGTGAGAGCAGCAGCTGCGGAGCACTTGGGAGAGGGTATGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS GCA 72 bp TGGCCTTGCCGCATCCTGGCCATACCCTCTCCCAAGTaGTCCGCAGCTGCTGCTCTCACAGGTATCACTCCC +
Preference number: 6 (lower is better)
Translates to: WPCRILAIPSPK*SAAAALTGITP
Trigger: GGGAGTGATACCTGTGAGAGCAGCAGCTGCGGAGCACTTGGGAGAGGGTATGGCCAGGATGCGGCAAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539798.2
CDS GCA 72 bp ACCGCGAACAGCTGCCCCTGCACAACTGCCATCTTGTaGCTCCACCTGCCCTTGTGCAGAGAGGCTACCTTG +
Preference number: 6 (lower is better)
Translates to: TANSCPCTTAIL*LHLPLCREATL
Trigger: CAAGGTAGCCTCTCTGCACAAGGGCAGGTGGAGGCACAAGATGGCAGTTGTGCAGGGGCAGCTGTTCGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376292.8
ENST00000539798.2
CDS CAA 72 bp CCCAGTGCTGCCACCACCTGGGCAGCCTCCACCCAGTaGCTGTACCTCCCTGAGCCGGTTTCCTCTCATTTA +
Preference number: 6 (lower is better)
Translates to: PSAATTWAASTQ*LYLPEPVSSHL
Trigger: TAAATGAGAGGAAACCGGCTCAGGGAGGTACAGCAACTGGGTGGAGGCTGCCCAGGTGGTGGCAGCACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS CAA 90 bp AGGGTTTTAGAGAACCTCCCTCCAGCACATCCACAGATCTGTACCTaGTGTCCCAGGGCAGCCGCTGCAGCTCGTGCCTACCTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: RVLENLPPAHPQICT*CPRAAAAARAYLPL
Trigger: CAGGGGCAGGTAGGCACGAGCTGCAGCGGCTGCCCTGGGACACAAGGTACAGATCTGTGGATGTGCTGGAGGGAGGTTCTCTAAAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS TCA 72 bp GCTGGACCTCCACCTGCCCACTGCTGGGGTCAAAGGTaGAGACCTTATCGGTGCTTTCTCCGCGATCATCCC +
Preference number: 6 (lower is better)
Translates to: AGPPPAHCWGQR*RPYRCFLRDHP
Trigger: GGGATGATCGCGGAGAAAGCACCGATAAGGTCTTCACCTTTGACCCCAGCAGTGGGCAGGTGGAGGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
ENST00000624466.1
CDS CCA 72 bp GTGCTTTCTCCGCGATCATCCCGCCCGCCAAGGATGTaGACCTTCCCGTCACACACAGTGACTCCACAGCTT +
Preference number: 6 (lower is better)
Translates to: VLSPRSSRPPRM*TFPSHTVTPQL
Trigger: AAGCTGTGGAGTCACTGTGTGTGACGGGAAGGTCCACATCCTTGGCGGGCGGGATGATCGCGGAGAAAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
ENST00000624466.1
CDS CAA 90 bp AAGGTAGGGGAGGCAGGGAATTGCAGGGGCCAGAGCTTCCAGGACTaGGGCCTCCCTGCTCTGATATCACTAGAGCAGACCTTAGCAACT +
Preference number: 6 (lower is better)
Translates to: KVGEAGNCRGQSFQD*GLPALISLEQTLAT
Trigger: AGTTGCTAAGGTCTGCTCTAGTGATATCAGAGCAGGGAGGCCCAAGTCCTGGAAGCTCTGGCCCCTGCAATTCCCTGCCTCCCCTACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS TCA 72 bp GCCCGCCAAGGATGTGGACCTTCCCGTCACACACAGTaGCTCCACAGCTTTCCTGGGTGGACAAACAGAAAG +
Preference number: 6 (lower is better)
Translates to: ARQGCGPSRHTQ*LHSFPGWTNRK
Trigger: CTTTCTGTTTGTCCACCCAGGAAAGCTGTGGAGTCACTGTGTGTGACGGGAAGGTCCACATCCTTGGCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS GCA 72 bp TGCACAACTGCCATCTTGTGCCTCCACCTGCCCTTGTaGAGAGAGGCTACCTTGATCCAGGTGTGCAGATGG +
Preference number: 6 (lower is better)
Translates to: CTTAILCLHLPL*REATLIQVCRW
Trigger: CCATCTGCACACCTGGATCAAGGTAGCCTCTCTGCACAAGGGCAGGTGGAGGCACAAGATGGCAGTTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000527491.1
ENST00000539798.2
CDS CCA 72 bp TCAGGCTGTCCAAATCTGAATCACCTGCCCAAGCTCTaGATGATGGTGACACAGCCGTGGGAGCTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: SGCPNLNHLPKL*MMVTQPWELVQ
Trigger: CTGCACCAGCTCCCACGGCTGTGTCACCATCATCCAGAGCTTGGGCAGGTGATTCAGATTTGGACAGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000539798.2
ENST00000624466.1
CDS CAA 90 bp AGGGCCTTAGGGCCCTCGGCCTCATCGCTTCAGTCCTTACAGTCTTaGAGCTGGAAACTATCCCTGTCCCCAACCCAGTTTCAGGACCAA +
Preference number: 6 (lower is better)
Translates to: RALGPSASSLQSLQS*SWKLSLSPTQFQDQ
Trigger: TTGGTCCTGAAACTGGGTTGGGGACAGGGATAGTTTCCAGCTCAAAGACTGTAAGGACTGAAGCGATGAGGCCGAGGGCCCTAAGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS TCA 72 bp GGCCCTCGGCCTCATCGCTTCAGTCCTTACAGTCTTTaGGCTGGAAACTATCCCTGTCCCCAACCCAGTTTC +
Preference number: 6 (lower is better)
Translates to: GPRPHRFSPYSL*AGNYPCPQPSF
Trigger: GAAACTGGGTTGGGGACAGGGATAGTTTCCAGCTCAAAGACTGTAAGGACTGAAGCGATGAGGCCGAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS CCA 72 bp AGTGGCCTTCGGGGCAGGAGAGACCACAGGGTCATTTaGACCAAATCCCCACTCAAAGCTATAGCACTTGGG +
Preference number: 6 (lower is better)
Translates to: SGLRGRRDHRVI*TKSPLKAIALG
Trigger: CCCAAGTGCTATAGCTTTGAGTGGGGATTTGGTCCAAATGACCCTGTGGTCTCTCCTGCCCCGAAGGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS CAA 72 bp TTGTGCCTCCACCTGCCCTTGTGCAGAGAGGCTACCTaGATCCAGGTGTGCAGATGGGAGCTAAACATCCAC +
Preference number: 6 (lower is better)
Translates to: LCLHLPLCREAT*IQVCRWELNIH
Trigger: GTGGATGTTTAGCTCCCATCTGCACACCTGGATCAAGGTAGCCTCTCTGCACAAGGGCAGGTGGAGGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376292.8
ENST00000460787.1
ENST00000527491.1
ENST00000539798.2
CDS CAA 72 bp GGGCCCTCGGCCTCATCGCTTCAGTCCTTACAGTCTTaGAGCTGGAAACTATCCCTGTCCCCAACCCAGTTT +
Preference number: 6 (lower is better)
Translates to: GPSASSLQSLQS*SWKLSLSPTQF
Trigger: AAACTGGGTTGGGGACAGGGATAGTTTCCAGCTCAAAGACTGTAAGGACTGAAGCGATGAGGCCGAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS TCA 72 bp TCTGTCCCTGCCTGGCCAGGCCAGATAATAGAACCTTaGCCCACAGACTGTGAACAGGCAATCTGGACTGTA +
Preference number: 6 (lower is better)
Translates to: SVPAWPGQIIEP*PTDCEQAIWTV
Trigger: TACAGTCCAGATTGCCTGTTCACAGTCTGTGGGTCAAGGTTCTATTATCTGGCCTGGCCAGGCAGGGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS CCA 72 bp TCGGCCTCATCGCTTCAGTCCTTACAGTCTTTGAGCTaGAAACTATCCCTGTCCCCAACCCAGTTTCAGGAC +
Preference number: 6 (lower is better)
Translates to: SASSLQSLQSLS*KLSLSPTQFQD
Trigger: GTCCTGAAACTGGGTTGGGGACAGGGATAGTTTCCAGCTCAAAGACTGTAAGGACTGAAGCGATGAGGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS CAA 90 bp CTGGAAGAATGTGGTCAGGGAATAAGGAAGCGTGGGCACCCTAATTaGGGAAAGAGTCAAGTCCTAGGACCACAGGCTTATGAGGCCATC +
Preference number: 6 (lower is better)
Translates to: LEECGQGIRKRGHPN*GKSQVLGPQAYEAI
Trigger: GATGGCCTCATAAGCCTGTGGTCCTAGGACTTGACTCTTTCCCAAATTAGGGTGCCCACGCTTCCTTATTCCCTGACCACATTCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS CCA 72 bp CACTGCGCCCGGCCGACAGATTCTTTTATTCTTGAGTaGCACAGTCAAGATTCAAACCTAGACTCTATGGCC +
Preference number: 6 (lower is better)
Translates to: HCARPTDSFILE*HSQDSNLDSMA
Trigger: GGCCATAGAGTCTAGGTTTGAATCTTGACTGTGCCACTCAAGAATAAAAGAATCTGTCGGCCGGGCGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS CAA 72 bp TGTGGTCAGGGAATAAGGAAGCGTGGGCACCCTAATTaGGGAAAGAGTCAAGTCCTAGGACCACAGGCTTAT +
Preference number: 6 (lower is better)
Translates to: CGQGIRKRGHPN*GKSQVLGPQAY
Trigger: ATAAGCCTGTGGTCCTAGGACTTGACTCTTTCCCAAATTAGGGTGCCCACGCTTCCTTATTCCCTGACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS GCA 72 bp GGTTTCCTCTCATTTAGCGGGGATGAGACCTTAACCTaGATGGTTACAGCTGTAAAATACCTGGCACCAAGC +
Preference number: 6 (lower is better)
Translates to: GFLSFSGDETLT*MVTAVKYLAPS
Trigger: GCTTGGTGCCAGGTATTTTACAGCTGTAACCATGCAGGTTAAGGTCTCATCCCCGCTAAATGAGAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460787.1
CDS GCA 72 bp AGGTGTCTTGCAGCCCTATTTCTACAGCTGTCCACATaGCCATGGGTGTTTCTGATGCCCTTAACAGTTTCT +
Preference number: 6 (lower is better)
Translates to: RCLAALFLQLST*PWVFLMPLTVS
Trigger: AGAAACTGTTAAGGGCATCAGAAACACCCATGGGCATGTGGACAGCTGTAGAAATAGGGCTGCAAGACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS GCA 72 bp TCAAGGGCTCTTCATCTAGTTCTATGTTCTGTCCTCTaGCTCTGGACTCCCTTTGTCAAAAGCCTCCTCATC +
Preference number: 6 (lower is better)
Translates to: SRALHLVLCSVL*LWTPFVKSLLI
Trigger: GATGAGGAGGCTTTTGACAAAGGGAGTCCAGAGGCAGAGGACAGAACATAGAACTAGATGAAGAGCCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS CCA 72 bp AGAAATCTCACCTCTAAGGTCACCAAAGGTCAGAACTaGCAGAGACCTCCAGTCCAACCATATCTGTGTAGT +
Preference number: 6 (lower is better)
Translates to: RNLTSKVTKGQN*QRPPVQPYLCS
Trigger: ACTACACAGATATGGTTGGACTGGAGGTCTCTGCCAGTTCTGACCTTTGGTGACCTTAGAGGTGAGATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS GCA 72 bp TCAGTTTCCTCATCGGCAAAGGGAGAAGAACTAAAGTaGCTTCTTCACAGGGTTCCCTTAACAGTTAATGGA +
Preference number: 6 (lower is better)
Translates to: SVSSSAKGEELK*LLHRVPLTVNG
Trigger: TCCATTAACTGTTAAGGGAACCCTGTGAAGAAGGCACTTTAGTTCTTCTCCCTTTGCCGATGAGGAAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624466.1
CDS TCA 72 bp ATTTGCAAAAAGCCTAAATGTCCCAACAATAAAAGATaGGTAGACTCTAGTTCATCCACCATGTGGAATAGT +
Preference number: 6 (lower is better)
Translates to: ICKKPKCPNNKR*VDSSSSTMWNS
Trigger: ACTATTCCACATGGTGGATGAACTAGAGTCTACTCATCTTTTATTGTTGGGACATTTAGGCTTTTTGCAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624466.1