RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHL32 (Homo sapiens)

Ensembl gene IDs: ENSG00000186231

Ensembl transcript IDs: ENST00000369254.5, ENST00000369261.9, ENST00000447886.1, ENST00000536676.5, ENST00000539200.5, ENST00000544166.5, ENST00000620278.1

Found 424 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTGCAGACCTCGCGCTTTTTCCCACCAATGATATACAGAGTGTCTaGCTGGAATCGTGGTTTGGTCCTGCGAGTCTGCCAGACAGGCTG +
Preference number: 1 (lower is better)
Translates to: LADLALFPTNDIQSV*LESWFGPASLPDRL
Trigger: CAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACACTCTGTATATCATTGGTGGGAAAAAGCGCGAGGTCTGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447886.1
3UTR CCA 90 bp CAGACCTCGCGCTTTTTCCCACCAATGATATACAGAGTGTCTGACTaGAATCGTGGTTTGGTCCTGCGAGTCTGCCAGACAGGCTGTGCA +
Preference number: 1 (lower is better)
Translates to: QTSRFFPPMIYRVSD*NRGLVLRVCQTGCA
Trigger: TGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACACTCTGTATATCATTGGTGGGAAAAAGCGCGAGGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447886.1
3UTR TCA 90 bp GCCAGCTCACTCCAGTTGGCAATGGCAGCTATGAGAGCATTCTCCTaGTCAACAGGATTGAAGTACCGAAGTTCCTTGACCTTGCAGACC +
Preference number: 1 (lower is better)
Translates to: ASSLQLAMAAMRAFS*STGLKYRSSLTLQT
Trigger: GGTCTGCAAGGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAGAATGCTCTCATAGCTGCCATTGCCAACTGGAGTGAGCTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
3UTR CCA 90 bp GGTCATTGCCTCCAAGAACATAAAGCTTCCTTTGTACAGCAGCCATaGAATGGTAGACCCTTCTCTGCAGCATGGGGCTACGGCTTATCC +
Preference number: 1 (lower is better)
Translates to: GHCLQEHKASFVQQP*NGRPFSAAWGYGLS
Trigger: GGATAAGCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAAGGAAGCTTTATGTTCTTGGAGGCAATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
3UTR GCA 90 bp CTATATGGCGCACAAGGATCCGGTCATTATTGTAGTCTAGGTCATTaGCTCCAAGAACATAAAGCTTCCTTTGTACAGCAGCCATGGAAT +
Preference number: 1 (lower is better)
Translates to: LYGAQGSGHYCSLGH*LQEHKASFVQQPWN
Trigger: ATTCCATGGCTGCTGTACAAAGGAAGCTTTATGTTCTTGGAGGCAATGACCTAGACTACAATAATGACCGGATCCTTGTGCGCCATATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
3UTR TCA 90 bp TCCGAATATAAGACCTATAAAGCAAGACAAGGAAGCATGGAGCACTaGGTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTC +
Preference number: 1 (lower is better)
Translates to: SEYKTYKARQGSMEH*VFSCPVSNSQSYVF
Trigger: GAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGACTCAGTGCTCCATGCTTCCTTGTCTTGCTTTATAGGTCTTATATTCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR TCA 90 bp CAGCTCACTCCAGTTGGCAATGGCAGCTATGAGAGCATTCTCCTGATCAACAGGAGTACCGAAGTTCCTTaGCCTTGCAGACCTCGCGCT +
Preference number: 2 (lower is better)
Translates to: QLTPVGNGSYESILLINRSTEVP*PCRPRA
Trigger: AGCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACT...CCTGTTGATCAGGAGAATGCTCTCATAGCTGCCATTGCCAACTGGAGTGAGCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
3UTR-3UTR GCA 90 bp CTCCTGATCAACAGGATTGAAGTACCGAAGTTCCTTGACCTTGCAGACCTCGCGATCGTGGTTTGGTCCTaGGAGTCTGCCAGACAGGCT +
Preference number: 2 (lower is better)
Translates to: LLINRIEVPKFLDLADLAIVVWS*ESARQA
Trigger: AGCCTGTCTGGCAGACTCGCAGGACCAAACCACGAT...CGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
3UTR-3UTR GCA 90 bp CTCCTGATCAACAGGATTGAAGTACCGAAGTTCCTTGACCTTGCAGACCTCGCGCAGGCTGTGCATAGATaGTCTGGTGGTATTCCAGGG +
Preference number: 2 (lower is better)
Translates to: LLINRIEVPKFLDLADLAQAVHR*SGGIPG
Trigger: CCCTGGAATACCACCAGAGCATCTATGCACAGCCTG...CGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
3UTR-3UTR GCA 90 bp TTCCTTGACCTTGCAGACCTCGCGCTTTTTCCCACCAATGATATACAGAGTGTCCTGCCAGACAGGCTGTaGATAGATGCTCTGGTGGTA +
Preference number: 2 (lower is better)
Translates to: FLDLADLALFPTNDIQSVLPDRL*IDALVV
Trigger: TACCACCAGAGCATCTATGCACAGCCTGTCTGGCAG...GACACTCTGTATATCATTGGTGGGAAAAAGCGCGAGGTCTGCAAGGTCAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447886.1
3UTR-3UTR CCA 90 bp CTCCTGATCAACAGGATTGAAGTACCGAAGTTCCTTGACCTTGCAGACCTCGCGTACAGAGTGTCTGACTaGAATCGTGGTTTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: LLINRIEVPKFLDLADLAYRVSD*NRGLVL
Trigger: CAGGACCAAACCACGATTCCAGTCAGACACTCTGTA...CGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
3UTR-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGGAAGCATGGAGCACTaGGTCTTTTCATGCCCAGTA +
Preference number: 2 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVGSMEH*VFSCPV
Trigger: TACTGGGCATGAAAAGACTCAGTGCTCCATGCTTCC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTGTCATAATGCTGAGTaGGTCTCTACTGAGCAGGGC +
Preference number: 2 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVCHNAE*VSTEQG
Trigger: GCCCTGCTCAGTAGAGACTCACTCAGCATTATGACA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR CCA 90 bp GTCTATGTTGTAAGAATCTATATGGCGCACAAGGATCCGGTCATTATTGTAGTCTTTGTACAGCAGCCATaGAATGGTAGACCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: VYVVRIYMAHKDPVIIVVFVQQP*NGRPFS
Trigger: AGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAA...GACTACAATAATGACCGGATCCTTGTGCGCCATATAGATTCTTACAACATAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
3UTR-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGGAAGCATGGAGCACTaGGTCTTTTCATGCCCAGTA +
Preference number: 2 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLGSMEH*VFSCPV
Trigger: TACTGGGCATGAAAAGACTCAGTGCTCCATGCTTCC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATGTCATAATGCTGAGTaGGTCTCTACTGAGCAGGGC +
Preference number: 2 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLCHNAE*VSTEQG
Trigger: GCCCTGCTCAGTAGAGACTCACTCAGCATTATGACA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR CCA 90 bp TATGGCGCACAAGGATCCGGTCATTATTGTAGTCTAGGTCATTGCCTCCAAGAACTTATCCACTTATTCTaGTTAGGTTCATACACCATT +
Preference number: 2 (lower is better)
Translates to: YGAQGSGHYCSLGHCLQELIHLF*LGSYTI
Trigger: AATGGTGTATGAACCTAACCAGAATAAGTGGATAAG...TTCTTGGAGGCAATGACCTAGACTACAATAATGACCGGATCCTTGTGCGCCATA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
3UTR-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTGTAAAGTTAGGTTCTaGCCCAAGGTCAGAGTAACC +
Preference number: 2 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVCKVRF*PKVRVT
Trigger: GGTTACTCTGACCTTGGGTCAGAACCTAACTTTACA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCAAGACAAGGAAGCATaGAGCACTGAGTCTTTTCAT +
Preference number: 2 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVQDKEA*STESFH
Trigger: ATGAAAAGACTCAGTGCTCCATGCTTCCTTGTCTTG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGGGTATTTCAACAACTaGTGTTCCAGTGTATGTCTA +
Preference number: 2 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVGYFNN*CSSVCL
Trigger: TAGACATACACTGGAACAGCAGTTGTTGAAATACCC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACAAGACAAGGAAGCATaGAGCACTGAGTCTTTTCAT +
Preference number: 2 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLQDKEA*STESFH
Trigger: ATGAAAAGACTCAGTGCTCCATGCTTCCTTGTCTTG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGGGTATTTCAACAACTaGTGTTCCAGTGTATGTCTA +
Preference number: 2 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLGYFNN*CSSVCL
Trigger: TAGACATACACTGGAACAGCAGTTGTTGAAATACCC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAAAGTGTACAAAGAATaGTCTAAAGACCCATGGAAC +
Preference number: 2 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLKVYKE*SKDPWN
Trigger: GTTCCATGGGTCTTTAGAGCATTCTTTGTACACTTT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTGCTCTAAAGACCCATaGAACACAATATACCTTAAA +
Preference number: 2 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVCSKDP*NTIYLK
Trigger: TTTAAGGTATATTGTGTTCCATGGGTCTTTAGAGCA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATGCTCTAAAGACCCATaGAACACAATATACCTTAAA +
Preference number: 2 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLCSKDP*NTIYLK
Trigger: TTTAAGGTATATTGTGTTCCATGGGTCTTTAGAGCA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR CAA 90 bp CAATGGTGGCTCCTTCCCACAGGCATGGGAGCCAGCTCACTCCAGTTGGCAATGGACTGGAATCGTGGTTaGGTCCTGCGAGTCTGCCAG +
Preference number: 3 (lower is better)
Translates to: QWWLLPTGMGASSLQLAMDWNRG*VLRVCQ
Trigger: CTGGCAGACTCGCAGGACCAAACCACGATTCCAGTC...CATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
3UTR TCA 72 bp CTCGCGCTTTTTCCCACCAATGATATACAGAGTGTCTaGCTGGAATCGTGGTTTGGTCCTGCGAGTCTGCCA +
Preference number: 3 (lower is better)
Translates to: LALFPTNDIQSV*LESWFGPASLP
Trigger: TGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACACTCTGTATATCATTGGTGGGAAAAAGCGCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447886.1
3UTR CCA 72 bp CGCTTTTTCCCACCAATGATATACAGAGTGTCTGACTaGAATCGTGGTTTGGTCCTGCGAGTCTGCCAGACA +
Preference number: 3 (lower is better)
Translates to: RFFPPMIYRVSD*NRGLVLRVCQT
Trigger: TGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACACTCTGTATATCATTGGTGGGAAAAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447886.1
3UTR TCA 72 bp CTCCAGTTGGCAATGGCAGCTATGAGAGCATTCTCCTaGTCAACAGGATTGAAGTACCGAAGTTCCTTGACC +
Preference number: 3 (lower is better)
Translates to: LQLAMAAMRAFS*STGLKYRSSLT
Trigger: GGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAGAATGCTCTCATAGCTGCCATTGCCAACTGGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
3UTR TCA 72 bp AAGACCTATAAAGCAAGACAAGGAAGCATGGAGCACTaGGTCTTTTCATGCCCAGTATCCAACAGTCAGAGC +
Preference number: 3 (lower is better)
Translates to: KTYKARQGSMEH*VFSCPVSNSQS
Trigger: GCTCTGACTGTTGGATACTGGGCATGAAAAGACTCAGTGCTCCATGCTTCCTTGTCTTGCTTTATAGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR CAA 90 bp AATTACAACGTGTCCACTGGTCAGTGTCTATGTTGTAAGAATCTATATGGCGCAAACATAAAGCTTCCTTaGTACAGCAGCCATGGAATG +
Preference number: 3 (lower is better)
Translates to: NYNVSTGQCLCCKNLYGANIKLP*YSSHGM
Trigger: CATTCCATGGCTGCTGTACAAAGGAAGCTTTATGTT...TGCGCCATATAGATTCTTACAACATAGACACTGACCAGTGGACACGTTGTAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
3UTR TCA 72 bp AAATCAGTAATTATCCTCCTTAAAAGGTGGGAAAACTaGAGCACTGTAAAGTTAGGTTCTGACCCAAGGTCA +
Preference number: 3 (lower is better)
Translates to: KSVIILLKRWEN*STVKLGSDPRS
Trigger: TGACCTTGGGTCAGAACCTAACTTTACAGTGCTTCAGTTTTCCCACCTTTTAAGGAGGATAATTACTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCAGATCATCGATGCCATaGTGTCCAATAAATTGCCTT +
Preference number: 3 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVRSSMP*CPINCL
Trigger: AAGGCAATTTATTGGACACAATGGCATCGATGATCT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
3UTR-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAGATCATCGATGCCATaGTGTCCAATAAATTGCCTT +
Preference number: 3 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLRSSMP*CPINCL
Trigger: AAGGCAATTTATTGGACACAATGGCATCGATGATCT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp TCCCACAGGCATGGGAGCCAGCTCACTCCAGTTGGCAATGGCAGCTATGAGAGCTCCAACAGCTGTAGGTaGCTGCCCGCTGCTAGCACA +
Preference number: 4 (lower is better)
Translates to: SHRHGSQLTPVGNGSYESSNSCR*LPAAST
Trigger: TGTGCTAGCAGCGGGCAGTCACCTACAGCTGTTGGA...GCTCTCATAGCTGCCATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR CCA 90 bp AATGGTGGCTCCTTCCCACAGGCATGGGAGCCAGCTCACTCCAGTTGGCAATGGGCAGTCTCACTTGCTTaGACAAGGGGGTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: NGGSFPQAWEPAHSSWQWAVSLA*TRGWDR
Trigger: CCTGTCCCACCCCCTTGTCCAAGCAAGTGAGACTGC...CCATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGGTGGCACGTCCCGCTaGCTCCGCCCCAGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMGGTSR*LRPRRS
Trigger: CGACCGCCTGGGGCGGAGTCAGCGGGACGTGCCACC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGCCTGCGTGCGTGTGTaGGCGCGACTGCCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMACVRV*ARLPAR
Trigger: GCGCGCAGGCAGTCGCGCGCACACACGCACGCAGGC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp TCCCACAGGCATGGGAGCCAGCTCACTCCAGTTGGCAATGGCAGCTATGAGAGCCACTTCTGCCAGATCTaGTCTTCACTCAGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SHRHGSQLTPVGNGSYESHFCQI*SSLREV
Trigger: GACCTCCCTGAGTGAAGAGCAGATCTGGCAGAAGTG...GCTCTCATAGCTGCCATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR GCA 90 bp CCACACAATGGTGGCTCCTTCCCACAGGCATGGGAGCCAGCTCACTCCAGTTGGCCAGTCTCCCCTCAGTaGACAAAAGGCAGCACAAAT +
Preference number: 4 (lower is better)
Translates to: PHNGGSFPQAWEPAHSSWPVSPQ*TKGSTN
Trigger: ATTTGTGCTGCCTTTTGTGCACTGAGGGGAGACTGG...CCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR CCA 90 bp TTTGTACAGCAGCCATGGAATGGTAGACCCTTCTCTGCAGCATGGGGCTACGGCGCTGCTAGCACATCCTaGATCACACCTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FVQQPWNGRPFSAAWGYGAASTS*ITPGSS
Trigger: GCTGGAGCCAGGTGTGATCCAGGATGTGCTAGCAGC...GCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR CCA 90 bp AGAGTGTCTGACTGGAATCGTGGTTTGGTCCTGCGAGTCTGCCAGACAGGCTGTGCTGCTAGCACATCCTaGATCACACCTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RVSDWNRGLVLRVCQTGCAASTS*ITPGSS
Trigger: GCTGGAGCCAGGTGTGATCCAGGATGTGCTAGCAGC...ACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR CCA 90 bp TGTCTGACTGGAATCGTGGTTTGGTCCTGCGAGTCTGCCAGACAGGCTGTGCATTCCTTCCCACAGGCATaGGAGCCAGCTCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: CLTGIVVWSCESARQAVHSFPQA*EPAHSS
Trigger: ACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGA...ATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR GCA 90 bp TTTGTACAGCAGCCATGGAATGGTAGACCCTTCTCTGCAGCATGGGGCTACGGCACAGCTGTAGGTGACTaGCCGCTGCTAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: FVQQPWNGRPFSAAWGYGTAVGD*PLLAHP
Trigger: AGGATGTGCTAGCAGCGGGCAGTCACCTACAGCTGT...GCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGTGCGCGCGACTGCCTaGGCGCTCCCGAACTGTCGC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMVRATA*ALPNCR
Trigger: GCGACAGTTCGGGAGCGCGCAGGCAGTCGCGCGCAC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GTGTCTGACTGGAATCGTGGTTTGGTCCTGCGAGTCTGCCAGACAGGCTGTGCACAGGCTGTGCATAGATaGTCTGGTGGTATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VSDWNRGLVLRVCQTGCAQAVHR*SGGIPG
Trigger: CCCTGGAATACCACCAGAGCATCTATGCACAGCCTG...TGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR GCA 90 bp TGGTTTGGTCCTGCGAGTCTGCCAGACAGGCTGTGCATAGATGCTCTGGTGGTAATCGTGGTTTGGTCCTaGGAGTCTGCCAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: WFGPASLPDRLCIDALVVIVVWS*ESARQA
Trigger: AGCCTGTCTGGCAGACTCGCAGGACCAAACCACGAT...TACCACCAGAGCATCTATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR TCA 90 bp CAGCAGCCATGGAATGGTAGACCCTTCTCTGCAGCATGGGGCTACGGCTTATCCGCATTTCTTGAATACTaGGGCAGCGTTCAGACGGCA +
Preference number: 4 (lower is better)
Translates to: QQPWNGRPFSAAWGYGLSAFLEY*GSVQTA
Trigger: TGCCGTCTGAACGCTGCCTCAGTATTCAAGAAATGC...GGATAAGCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATTCCATGGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR TCA 90 bp TGCATAGATGCTCTGGTGGTATTCCAGGGCCTCGTTGACAAGGGCTGTTGCAGTGTCTTGTCATCCCATTaGGGTAAGCCAGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: CIDALVVFQGLVDKGCCSVLSSH*GKPGHQ
Trigger: CTGGTGCCCTGGCTTACCTCAATGGGATGACAAGAC...ACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAGAGCATCTATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR GCA 90 bp GAGTGTCTGACTGGAATCGTGGTTTGGTCCTGCGAGTCTGCCAGACAGGCTGTGGTTGACAAGGGCTGTTaGAGTCTCACTTGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ECLTGIVVWSCESARQAVVDKGC*SLTCLD
Trigger: GTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAAC...CACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR GCA 90 bp CCAGACAGGCTGTGCATAGATGCTCTGGTGGTATTCCAGGGCCTCGTTGACAAGCTGCCAGACAGGCTGTaGATAGATGCTCTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: PDRLCIDALVVFQGLVDKLPDRL*IDALVV
Trigger: TACCACCAGAGCATCTATGCACAGCCTGTCTGGCAG...CTTGTCAACGAGGCCCTGGAATACCACCAGAGCATCTATGCACAGCCTGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR CCA 90 bp TACAGCAGCCATGGAATGGTAGACCCTTCTCTGCAGCATGGGGCTACGGCTTATCCCTTCTCTGCAGCATaGGGCTACGGCTTATCCACT +
Preference number: 4 (lower is better)
Translates to: YSSHGMVDPSLQHGATAYPFSAA*GYGLST
Trigger: AGTGGATAAGCCGTAGCCCCATGCTGCAGAGAAGGG...ATAAGCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATTCCATGGCTGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR TCA 90 bp AAGCTTCCTTTGTACAGCAGCCATGGAATGGTAGACCCTTCTCTGCAGCATGGGCCTCAGCAATCAGGGTaGTGTCGCAGAGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: KLPLYSSHGMVDPSLQHGPQQSG*CRRGCH
Trigger: ATGGCATCCTCTGCGACATCACCCTGATTGCTGAGG...CCCATGCTGCAGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAAGGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR TCA 90 bp CTCCTGATCAACAGGATTGAAGTACCGAAGTTCCTTGACCTTGCAGACCTCGCGAGTACCGAAGTTCCTTaGCCTTGCAGACCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: LLINRIEVPKFLDLADLASTEVP*PCRPRA
Trigger: AGCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACT...CGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGGTGGCACGTCCCGCTaGCTCCGCCCCAGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVGGTSR*LRPRRS
Trigger: CGACCGCCTGGGGCGGAGTCAGCGGGACGTGCCACC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp AATGGTGGCTCCTTCCCACAGGCATGGGAGCCAGCTCACTCCAGTTGGCAATGGCAAATTCCACACTTCTaGCAGATCTGCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: NGGSFPQAWEPAHSSWQWQIPHF*QICSSL
Trigger: GAGTGAAGAGCAGATCTGGCAGAAGTGTGGAATTTG...CCATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR CCA 90 bp CCGAAGTTCCTTGACCTTGCAGACCTCGCGCTTTTTCCCACCAATGATATACAGGCTTGGACAAGGGGGTaGGACAGGGCAACTGTATGG +
Preference number: 4 (lower is better)
Translates to: PKFLDLADLALFPTNDIQAWTRG*DRATVW
Trigger: CCATACAGTTGCCCTGTCCCACCCCCTTGTCCAAGC...CTGTATATCATTGGTGGGAAAAAGCGCGAGGTCTGCAAGGTCAAGGAACTTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR CCA 90 bp GTTTGGTCCTGCGAGTCTGCCAGACAGGCTGTGCATAGATGCTCTGGTGGTATTACTGGAATCGTGGTTTaGTCCTGCGAGTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VWSCESARQAVHRCSGGITGIVV*SCESAR
Trigger: TCTGGCAGACTCGCAGGACCAAACCACGATTCCAGT...AATACCACCAGAGCATCTATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGCGGTCGCGTCAGACTaGAGACGCACCTTGGCACCC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMAVASD*RRTLAP
Trigger: GGGTGCCAAGGTGCGTCTCCAGTCTGACGCGACCGC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGAGCCAGCACTGCAGGTaGCACGTCCCGCTGACTCCG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMSQHCR*HVPLTP
Trigger: CGGAGTCAGCGGGACGTGCCACCTGCAGTGCTGGCT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTTCCAGCCGATGGGGTaGGCGGTCTGCTGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMFQPMG*AVCWVR
Trigger: CCTAACCCAGCAGACCGCTCACCCCATCGGCTGGAA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp CAATGGTGGCTCCTTCCCACAGGCATGGGAGCCAGCTCACTCCAGTTGGCAATGATGAGAGCATTCTCCTaGTCAACAGGATTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: QWWLLPTGMGASSLQLAMMRAFS*STGLKY
Trigger: GTACTTCAATCCTGTTGATCAGGAGAATGCTCTCAT...CATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR TCA 90 bp TGTCTGACTGGAATCGTGGTTTGGTCCTGCGAGTCTGCCAGACAGGCTGTGCATTGGCAATGGCAGCTATaGGAGCATTCTCCTGATCAA +
Preference number: 4 (lower is better)
Translates to: CLTGIVVWSCESARQAVHWQWQL*EHSPDQ
Trigger: TTGATCAGGAGAATGCTCTCATAGCTGCCATTGCCA...ATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR GCA 90 bp AAGCTTCCTTTGTACAGCAGCCATGGAATGGTAGACCCTTCTCTGCAGCATGGGGCAAACTCCAGAGCCTaGTTTAAGCCAAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: KLPLYSSHGMVDPSLQHGANSRA*FKPRLV
Trigger: GACCAGCCTTGGCTTAAAGCAGGCTCTGGAGTTTGC...CCCATGCTGCAGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAAGGAAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCCTGCGTGCGTGTGTaGGCGCGACTGCCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVACVRV*ARLPAR
Trigger: GCGCGCAGGCAGTCGCGCGCACACACGCACGCAGGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGTCTGCTGGGTTAGGTaGCAGAGACGGCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMVCWVR*QRRQRR
Trigger: CCTGCGCTGCCGTCTCTGGCACCTAACCCAGCAGAC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp CAGCTCACTCCAGTTGGCAATGGCAGCTATGAGAGCATTCTCCTGATCAACAGGTGTTGCAGTCTCACTTaGTTGGACAAGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: QLTPVGNGSYESILLINRCCSLT*LDKGVG
Trigger: TCCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACA...CCTGTTGATCAGGAGAATGCTCTCATAGCTGCCATTGCCAACTGGAGTGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGTCCGGCCACTGGCATaGTCAACTTCCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMVRPLA*STSPPA
Trigger: GGCAGGAGGGGAAGTTGAGCATGCCAGTGGCCGGAC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp TATGGCGCACAAGGATCCGGTCATTATTGTAGTCTAGGTCATTGCCTCCAAGAACCATCACTCCTCTGCTaGTTCAGCGCTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: YGAQGSGHYCSLGHCLQEPSLLC*FSAART
Trigger: TGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGG...TTCTTGGAGGCAATGACCTAGACTACAATAATGACCGGATCCTTGTGCGCCATA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR TCA 90 bp TATGGCGCACAAGGATCCGGTCATTATTGTAGTCTAGGTCATTGCCTCCAAGAATCCAACAGCTGTAGGTaGCTGCCCGCTGCTAGCACA +
Preference number: 4 (lower is better)
Translates to: YGAQGSGHYCSLGHCLQESNSCR*LPAAST
Trigger: TGTGCTAGCAGCGGGCAGTCACCTACAGCTGTTGGA...TTCTTGGAGGCAATGACCTAGACTACAATAATGACCGGATCCTTGTGCGCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR TCA 90 bp TTTGTACAGCAGCCATGGAATGGTAGACCCTTCTCTGCAGCATGGGGCTACGGCGTTACTCCACCTGGATaGGATAGTGGGAGCATAAAT +
Preference number: 4 (lower is better)
Translates to: FVQQPWNGRPFSAAWGYGVTPPG*DSGSIN
Trigger: ATTTATGCTCCCACTATCTCATCCAGGTGGAGTAAC...GCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR TCA 90 bp CTTCCCACAGGCATGGGAGCCAGCTCACTCCAGTTGGCAATGGCAGCTATGAGAGCTTTTTCCCACCAATaGTATACAGAGTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: LPTGMGASSLQLAMAAMRAFSHQ*YTECLT
Trigger: AGTCAGACACTCTGTATATCATTGGTGGGAAAAAGC...TCTCATAGCTGCCATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR GCA 90 bp CAGCCATGGAATGGTAGACCCTTCTCTGCAGCATGGGGCTACGGCTTATCCACTAATCTGTCCTGTGTATaGAAACTCCAGAGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: QPWNGRPFSAAWGYGLSTNLSCV*KLQSLL
Trigger: AAGCAGGCTCTGGAGTTTGCATACACAGGACAGATT...AGTGGATAAGCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATTCCATGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR GCA 90 bp CTCACTCCAGTTGGCAATGGCAGCTATGAGAGCATTCTCCTGATCAACAGGATTACAGCTGTAGGTGACTaGCCGCTGCTAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: LTPVGNGSYESILLINRITAVGD*PLLAHP
Trigger: AGGATGTGCTAGCAGCGGGCAGTCACCTACAGCTGT...AATCCTGTTGATCAGGAGAATGCTCTCATAGCTGCCATTGCCAACTGGAGTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCCTGCGTGCGTGTGTaGGCGCGACTGCCTGCGCGC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLACVRV*ARLPAR
Trigger: GCGCGCAGGCAGTCGCGCGCACACACGCACGCAGGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGAAGCATTCCAGCCGATaGGGTGAGCGGTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMKHSSR*GERSAG
Trigger: CCCAGCAGACCGCTCACCCCATCGGCTGGAATGCTT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CCA 90 bp CTGGAATCGTGGTTTGGTCCTGCGAGTCTGCCAGACAGGCTGTGCATAGATGCTGACAGGGCAACTGTATaGAGAGTATCCACATCCATT +
Preference number: 4 (lower is better)
Translates to: LESWFGPASLPDRLCIDADRATV*RVSTSI
Trigger: AATGGATGTGGATACTCTCCATACAGTTGCCCTGTC...AGCATCTATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCACACGTCCGGCCACTaGCATGCTCAACTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMHTSGH*HAQLPL
Trigger: GAGGGGAAGTTGAGCATGCCAGTGGCCGGACGTGTG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCCATCACTCCTCTGCTaGTTCAGCGCTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMPSLLC*FSAART
Trigger: TGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTCCAACAGCTGTAGGTaGCTGCCCGCTGCTAGCACA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMSNSCR*LPAAST
Trigger: TGTGCTAGCAGCGGGCAGTCACCTACAGCTGTTGGA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGCACCGGCCTCTCCTTaGTGCACAATGGCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMAPASP*CTMALL
Trigger: AAGCAGAGCCATTGTGCATCAAGGAGAGGCCGGTGC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGACAGGAAGTCCCCCATaGCTGCCACACAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMTGSPP*LPHNGG
Trigger: GCCACCATTGTGTGGCAGTCATGGGGGACTTCCTGT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp TTTGTACAGCAGCCATGGAATGGTAGACCCTTCTCTGCAGCATGGGGCTACGGCCCTGTTCTGATATTGTaGCGTATTAGTTACTCCACC +
Preference number: 4 (lower is better)
Translates to: FVQQPWNGRPFSAAWGYGPVLIL*RISYST
Trigger: GGTGGAGTAACTAATACGGCACAATATCAGAACAGG...GCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGTGCGCGCGACTGCCTaGGCGCTCCCGAACTGTCGC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLVRATA*ALPNCR
Trigger: GCGACAGTTCGGGAGCGCGCAGGCAGTCGCGCGCAC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGTGTGTGCGCGCGACTaGCTGCGCGCTCCCGAACTG +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVVCARD*LRAPEL
Trigger: CAGTTCGGGAGCGCGCAGGCAGTCGCGCGCACACAC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCTGCTGGTTCGGGGATaGAGTAGCGAAGACGAGCGT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMLLVRG*SSEDER
Trigger: ACGCTCGTCTTCGCTACTGCATCCCCGAACCAGCAG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGCTGCTAGCACATCCTaGATCACACCTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMAASTS*ITPGSS
Trigger: GCTGGAGCCAGGTGTGATCCAGGATGTGCTAGCAGC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGTAGCTTCGCTCTGCTaGTTCGGGGATGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMVASLC*FGDAVA
Trigger: CGCTACTGCATCCCCGAACCAGCAGAGCGAAGCTAC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGCTTGGACAAGGGGGTaGGACAGGGCAACTGTATGG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMAWTRG*DRATVW
Trigger: CCATACAGTTGCCCTGTCCCACCCCCTTGTCCAAGC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp TACAGCAGCCATGGAATGGTAGACCCTTCTCTGCAGCATGGGGCTACGGCTTATACAAAGACTGAACATTaGCCGGAAATAGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: YSSHGMVDPSLQHGATAYTKTEH*PEIVTA
Trigger: TGCAGTGACTATTTCCGGGCAATGTTCAGTCTTTGT...ATAAGCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATTCCATGGCTGCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGACAGCTGTAGGTGACTaGCCGCTGCTAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMTAVGD*PLLAHP
Trigger: AGGATGTGCTAGCAGCGGGCAGTCACCTACAGCTGT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGTGTGTGCGCGCGACTaGCTGCGCGCTCCCGAACTG +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLVCARD*LRAPEL
Trigger: CAGTTCGGGAGCGCGCAGGCAGTCGCGCGCACACAC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGCAGTAGCTTCGCTCTaGTGGTTCGGGGATGCAGTA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMAVASL*WFGDAV
Trigger: TACTGCATCCCCGAACCAGCAGAGCGAAGCTACTGC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGATCGTGGTTTGGTCCTaGGAGTCTGCCAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMIVVWS*ESARQA
Trigger: AGCCTGTCTGGCAGACTCGCAGGACCAAACCACGAT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGAAGTCCCCCATGACTaGCACACAATGGTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMEVPHD*HTMVAP
Trigger: AGGAGCCACCATTGTGTGGCAGTCATGGGGGACTTC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCATGGGTGCTATCTCTaGCCAGGAATTACTGCGGGG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMHGCYL*PGITAG
Trigger: CCCCGCAGTAATTCCTGGGCAGAGATAGCACCCATG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTCCACCTGCCAGATCTaGTCTTCACTCAGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMSTCQI*SSLREV
Trigger: GACCTCCCTGAGTGAAGAGCAGATCTGGCAGGTGGA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCCCTTCTCTGCAGCATaGGGCTACGGCTTATCCACT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMPFSAA*GYGLST
Trigger: AGTGGATAAGCCGTAGCCCCATGCTGCAGAGAAGGG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGACTGCCACACAATGGTaGCTCCTTCCCACAGGCATG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMTATQW*LLPTGM
Trigger: CATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCCCGGCAGTTTTTCATaGGTGCTATCTCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMPGSFS*VLSLPR
Trigger: CCTGGGCAGAGATAGCACCCATGAAAAACTGCCGGG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAACTGGAGACGCACCTTaGCACCCCCGGGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLTGDAP*HPRGGF
Trigger: GAACCCGCCCCGGGGGTGCCAAGGTGCGTCTCCAGT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCGGTCGCGTCAGACTaGAGACGCACCTTGGCACCC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVAVASD*RRTLAP
Trigger: GGGTGCCAAGGTGCGTCTCCAGTCTGACGCGACCGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTTCCAGCCGATGGGGTaGGCGGTCTGCTGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVFQPMG*AVCWVR
Trigger: CCTAACCCAGCAGACCGCTCACCCCATCGGCTGGAA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCCCGGAAATAGTCACTaGATGCTGCTAGGACTGCCT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMPGNSH*MLLGLP
Trigger: AGGCAGTCCTAGCAGCATGCAGTGACTATTTCCGGG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGCAAACTCCAGAGCCTaGTTTAAGCCAAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMANSRA*FKPRLV
Trigger: GACCAGCCTTGGCTTAAAGCAGGCTCTGGAGTTTGC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGTCTGCTGGGTTAGGTaGCAGAGACGGCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVVCWVR*QRRQRR
Trigger: CCTGCGCTGCCGTCTCTGGCACCTAACCCAGCAGAC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTGTTGCAGTCTCACTTaGTTGGACAAGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMCCSLT*LDKGVG
Trigger: TCCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCAGGCTGTGCATAGATaGTCTGGTGGTATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMQAVHR*SGGIPG
Trigger: CCCTGGAATACCACCAGAGCATCTATGCACAGCCTG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCTGCCAGACAGGCTGTaGATAGATGCTCTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMLPDRL*IDALVV
Trigger: TACCACCAGAGCATCTATGCACAGCCTGTCTGGCAG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGTCCGGCCACTGGCATaGTCAACTTCCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVVRPLA*STSPPA
Trigger: GGCAGGAGGGGAAGTTGAGCATGCCAGTGGCCGGAC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGGCGCAGTTCATTTCTaGCCCCAACTGCATAGAGGT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMGAVHF*PQLHRG
Trigger: ACCTCTATGCAGTTGGGGGCAGAAATGAACTGCGCC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGACGGCATTTTCCAGCTaGGTTCCTCAGGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMTAFSS*VPQVLS
Trigger: GCTGAGAACCTGAGGAACCCAGCTGGAAAATGCCGT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGACTGTAGGCAGAACCTaGCGCAGTTCATTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMTVGRT*RSSFLP
Trigger: GGGCAGAAATGAACTGCGCCAGGTTCTGCCTACAGT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCGGTCGCGTCAGACTaGAGACGCACCTTGGCACCC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLAVASD*RRTLAP
Trigger: GGGTGCCAAGGTGCGTCTCCAGTCTGACGCGACCGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAGCCAGCACTGCAGGTaGCACGTCCCGCTGACTCCG +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLSQHCR*HVPLTP
Trigger: CGGAGTCAGCGGGACGTGCCACCTGCAGTGCTGGCT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp TACAACGTGTCCACTGGTCAGTGTCTATGTTGTAAGAATCTATATGGCGCACAAAGGACACTGTCATTGTaGGATTCGGAGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: YNVSTGQCLCCKNLYGAQRTLSL*DSEWQS
Trigger: GCTCTGCCACTCCGAATCTCACAATGACAGTGTCCT...TTGTGCGCCATATAGATTCTTACAACATAGACACTGACCAGTGGACACGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGGAAGCATGGAGCACTaGGTCTTTTCATGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMGSMEH*VFSCPV
Trigger: TACTGGGCATGAAAAGACTCAGTGCTCCATGCTTCC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTGTCATAATGCTGAGTaGGTCTCTACTGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMCHNAE*VSTEQG
Trigger: GCCCTGCTCAGTAGAGACTCACTCAGCATTATGACA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGTCTGCTGGGTTAGGTaGCAGAGACGGCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLVCWVR*QRRQRR
Trigger: CCTGCGCTGCCGTCTCTGGCACCTAACCCAGCAGAC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCCAAAGCGGATGTATTaGAGGAGCTCGTCCATGTAC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMPKRMY*RSSSMY
Trigger: GTACATGGACGAGCTCCTGCAATACATCCGCTTTGG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp AATGGCAGCTATGAGAGCATTCTCCTGATCAACAGGATTGAAGTACCGAAGTTCCCAAAGCGGATGTATTaGAGGAGCTCGTCCATGTAC +
Preference number: 4 (lower is better)
Translates to: NGSYESILLINRIEVPKFPKRMY*RSSSMY
Trigger: GTACATGGACGAGCTCCTGCAATACATCCGCTTTGG...GAACTTCGGTACTTCAATCCTGTTGATCAGGAGAATGCTCTCATAGCTGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGTTGACAAGGGCTGTTaGAGTCTCACTTGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMVDKGC*SLTCLD
Trigger: GTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAAC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCAAGCATTCCAGCCGATaGGGTGAGCGGTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVKHSSR*GERSAG
Trigger: CCCAGCAGACCGCTCACCCCATCGGCTGGAATGCTT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCACACGTCCGGCCACTaGCATGCTCAACTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVHTSGH*HAQLPL
Trigger: GAGGGGAAGTTGAGCATGCCAGTGGCCGGACGTGTG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGATCCTGGATCACACCTaGCTCCAGCAAAATCCGGAA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMILDHT*LQQNPE
Trigger: TTCCGGATTTTGCTGGAGCCAGGTGTGATCCAGGAT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536676.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCCATCACTCCTCTGCTaGTTCAGCGCTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVPSLLC*FSAART
Trigger: TGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp TACAACGTGTCCACTGGTCAGTGTCTATGTTGTAAGAATCTATATGGCGCACAAGCTAGGACTGCCTTGTaGGCATGGAATTTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: YNVSTGQCLCCKNLYGAQARTAL*AWNFCS
Trigger: GGAACAGAAATTCCATGCTCACAAGGCAGTCCTAGC...TTGTGCGCCATATAGATTCTTACAACATAGACACTGACCAGTGGACACGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCCAACAGCTGTAGGTaGCTGCCCGCTGCTAGCACA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVSNSCR*LPAAST
Trigger: TGTGCTAGCAGCGGGCAGTCACCTACAGCTGTTGGA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCACCGGCCTCTCCTTaGTGCACAATGGCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVAPASP*CTMALL
Trigger: AAGCAGAGCCATTGTGCATCAAGGAGAGGCCGGTGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp CCAGTTGGCAATGGCAGCTATGAGAGCATTCTCCTGATCAACAGGATTGAAGTAGATATACAGAGTGTCTaGCTGGAATCGTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: PVGNGSYESILLINRIEVDIQSV*LESWFG
Trigger: ACCAAACCACGATTCCAGTCAGACACTCTGTATATC...TACTTCAATCCTGTTGATCAGGAGAATGCTCTCATAGCTGCCATTGCCAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTGGCAATGGCAGCTATaGGAGCATTCTCCTGATCAA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMWQWQL*EHSPDQ
Trigger: TTGATCAGGAGAATGCTCTCATAGCTGCCATTGCCA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GTCTATGTTGTAAGAATCTATATGGCGCACAAGGATCCGGTCATTATTGTAGTCCCCGGAAATAGTCACTaGATGCTGCTAGGACTGCCT +
Preference number: 4 (lower is better)
Translates to: VYVVRIYMAHKDPVIIVVPGNSH*MLLGLP
Trigger: AGGCAGTCCTAGCAGCATGCAGTGACTATTTCCGGG...GACTACAATAATGACCGGATCCTTGTGCGCCATATAGATTCTTACAACATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCTGCTGGTTCGGGGATaGAGTAGCGAAGACGAGCGT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVLLVRG*SSEDER
Trigger: ACGCTCGTCTTCGCTACTGCATCCCCGAACCAGCAG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGAGCTGGAAGGAAGCATaGTGCTATTCCATTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMSWKEA*CYSIGS
Trigger: GCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTGGCTTTTCAGATGGTaGCAATCCTGTGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMWLFRW*QSCDEA
Trigger: TGCCTCATCACAGGATTGGCACCATCTGAAAAGCCA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGTCGCGCGGGGAAACTaGTCCCTAGTAAATAAAAAG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMVARGN*SLVNKK
Trigger: CTTTTTATTTACTAGGGAGCAGTTTCCCCGCGCGAC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CCA 90 bp GTCTATGTTGTAAGAATCTATATGGCGCACAAGGATCCGGTCATTATTGTAGTCACGGCATTTTCCAGCTaGGTTCCTCAGGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: VYVVRIYMAHKDPVIIVVTAFSS*VPQVLS
Trigger: GCTGAGAACCTGAGGAACCCAGCTGGAAAATGCCGT...GACTACAATAATGACCGGATCCTTGTGCGCCATATAGATTCTTACAACATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCTGCTAGCACATCCTaGATCACACCTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVAASTS*ITPGSS
Trigger: GCTGGAGCCAGGTGTGATCCAGGATGTGCTAGCAGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGTAGCTTCGCTCTGCTaGTTCGGGGATGCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVVASLC*FGDAVA
Trigger: CGCTACTGCATCCCCGAACCAGCAGAGCGAAGCTAC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCAGTCTCACTTGCTTaGACAAGGGGGTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVAVSLA*TRGWDR
Trigger: CCTGTCCCACCCCCTTGTCCAAGCAAGTGAGACTGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTACAGAGTGTCTGACTaGAATCGTGGTTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMYRVSD*NRGLVL
Trigger: CAGGACCAAACCACGATTCCAGTCAGACACTCTGTA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCCTTCCCACAGGCATaGGAGCCAGCTCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVSFPQA*EPAHSS
Trigger: ACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACACACGTCCGGCCACTaGCATGCTCAACTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLHTSGH*HAQLPL
Trigger: GAGGGGAAGTTGAGCATGCCAGTGGCCGGACGTGTG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCTTACATCCAGTACCTaGATACAAGCCAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMLTSST*IQARGS
Trigger: TGAGCCTCTGGCTTGTATCCAGGTACTGGATGTAAG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGCTTGGCTTTTCAGATaGTGCCAATCCTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMAWLFR*CQSCDE
Trigger: CTCATCACAGGATTGGCACCATCTGAAAAGCCAAGC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACCATCACTCCTCTGCTaGTTCAGCGCTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLPSLLC*FSAART
Trigger: TGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCCTCAGCAATCAGGGTaGTGTCGCAGAGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVPQQSG*CRRGCH
Trigger: ATGGCATCCTCTGCGACATCACCCTGATTGCTGAGG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCCACCATACAAAGACTaGACATTGCCCGGAAATAGT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMPPYKD*TLPGNS
Trigger: ACTATTTCCGGGCAATGTTCAGTCTTTGTATGGTGG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369261.9
ENST00000544166.5
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATCCAACAGCTGTAGGTaGCTGCCCGCTGCTAGCACA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLSNSCR*LPAAST
Trigger: TGTGCTAGCAGCGGGCAGTCACCTACAGCTGTTGGA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCACCGGCCTCTCCTTaGTGCACAATGGCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLAPASP*CTMALL
Trigger: AAGCAGAGCCATTGTGCATCAAGGAGAGGCCGGTGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGATATACAGAGTGTCTaGCTGGAATCGTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMDIQSV*LESWFG
Trigger: ACCAAACCACGATTCCAGTCAGACACTCTGTATATC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCAGTACCGAAGTTCCTTaGCCTTGCAGACCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVSTEVP*PCRPRA
Trigger: AGCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAACAGGAAGTCCCCCATaGCTGCCACACAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLTGSPP*LPHNGG
Trigger: GCCACCATTGTGTGGCAGTCATGGGGGACTTCCTGT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTGTAAAGTTAGGTTCTaGCCCAAGGTCAGAGTAACC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMCKVRF*PKVRVT
Trigger: GGTTACTCTGACCTTGGGTCAGAACCTAACTTTACA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGAATCTGTCCTGTGTATaGAAACTCCAGAGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMNLSCV*KLQSLL
Trigger: AAGCAGGCTCTGGAGTTTGCATACACAGGACAGATT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369261.9
ENST00000544166.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCACAGCTGTAGGTGACTaGCCGCTGCTAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVTAVGD*PLLAHP
Trigger: AGGATGTGCTAGCAGCGGGCAGTCACCTACAGCTGT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp CCACTGGTCAGTGTCTATGTTGTAAGAATCTATATGGCGCACAAGGATCCGGTCTGTAGTCTAGGTCATTaGCTCCAAGAACATAAAGCT +
Preference number: 4 (lower is better)
Translates to: PLVSVYVVRIYMAHKDPVCSLGH*LQEHKA
Trigger: AGCTTTATGTTCTTGGAGGCAATGACCTAGACTACA...GACCGGATCCTTGTGCGCCATATAGATTCTTACAACATAGACACTGACCAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCAGTAGCTTCGCTCTaGTGGTTCGGGGATGCAGTA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVAVASL*WFGDAV
Trigger: TACTGCATCCCCGAACCAGCAGAGCGAAGCTACTGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCTAGCTGCCAGATCTaGTCTTCACTCAGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVASCQI*SSLREV
Trigger: GACCTCCCTGAGTGAAGAGCAGATCTGGCAGCTAGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGAAGTCCCCCATGACTaGCACACAATGGTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVEVPHD*HTMVAP
Trigger: AGGAGCCACCATTGTGTGGCAGTCATGGGGGACTTC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCTTCTTTGCCTTCTCTaGTTACATCCAGTACCTGGA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMLLCLL*LHPVPG
Trigger: TCCAGGTACTGGATGTAAGCAGAGAAGGCAAAGAAG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp AATTACAACGTGTCCACTGGTCAGTGTCTATGTTGTAAGAATCTATATGGCGCAATCCTGGATCACACCTaGCTCCAGCAAAATCTGTCC +
Preference number: 4 (lower is better)
Translates to: NYNVSTGQCLCCKNLYGAILDHT*LQQNLS
Trigger: GGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGAT...TGCGCCATATAGATTCTTACAACATAGACACTGACCAGTGGACACGTTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCTGCTAGCACATCCTaGATCACACCTGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLAASTS*ITPGSS
Trigger: GCTGGAGCCAGGTGTGATCCAGGATGTGCTAGCAGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTTTGTACAGCAGCCATaGAATGGTAGACCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMFVQQP*NGRPFS
Trigger: AGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCTCCTTGATGCACAATaGCTCTGCTTCGCCCCACGA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVLLDAQ*LCFAPR
Trigger: TCGTGGGGCGAAGCAGAGCCATTGTGCATCAAGGAG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGACAGGGCAACTGTATaGAGAGTATCCACATCCATT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMDRATV*RVSTSI
Trigger: AATGGATGTGGATACTCTCCATACAGTTGCCCTGTC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCTTGGACAAGGGGGTaGGACAGGGCAACTGTATGG +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLAWTRG*DRATVW
Trigger: CCATACAGTTGCCCTGTCCCACCCCCTTGTCCAAGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCAGTCTCACTTGCTTaGACAAGGGGGTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLAVSLA*TRGWDR
Trigger: CCTGTCCCACCCCCTTGTCCAAGCAAGTGAGACTGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATCCTTCCCACAGGCATaGGAGCCAGCTCACTCCAGT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLSFPQA*EPAHSS
Trigger: ACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCACTGCCACACAATGGTaGCTCCTTCCCACAGGCATG +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVTATQW*LLPTGM
Trigger: CATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCTGTTCATGATGGCTTaGCTTTTCAGATGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMLFMMA*LFRWCQ
Trigger: TTGGCACCATCTGAAAAGCCAAGCCATCATGAACAG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGATCCTGGATCACACCTaGCTCCAGCAAAATACTCAT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMILDHT*LQQNTH
Trigger: ATGAGTATTTTGCTGGAGCCAGGTGTGATCCAGGAT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACCTCAGCAATCAGGGTaGTGTCGCAGAGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLPQQSG*CRRGCH
Trigger: ATGGCATCCTCTGCGACATCACCCTGATTGCTGAGG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAGTACCGAAGTTCCTTaGCCTTGCAGACCTCGCGCT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLSTEVP*PCRPRA
Trigger: AGCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTTTTCCTCCTGTTCATaGTGGCTTGGCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMFSSCS*WLGFSD
Trigger: ATCTGAAAAGCCAAGCCATCATGAACAGGAGGAAAA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCTATACCCATTCTGCTaGTCCATTGCTTCTATCACT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMLYPFC*SIASIT
Trigger: AGTGATAGAAGCAATGGATCAGCAGAATGGGTATAG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCCCGGAAATAGTCACTaGATGCTGCTAGGACTGCCT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVPGNSH*MLLGLP
Trigger: AGGCAGTCCTAGCAGCATGCAGTGACTATTTCCGGG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAACAGCTGTAGGTGACTaGCCGCTGCTAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLTAVGD*PLLAHP
Trigger: AGGATGTGCTAGCAGCGGGCAGTCACCTACAGCTGT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCCTGTTCTGATATTGTaGCGTATTAGTTACTCCACC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMPVLIL*RISYST
Trigger: GGTGGAGTAACTAATACGGCACAATATCAGAACAGG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCAGTAGCTTCGCTCTaGTGGTTCGGGGATGCAGTA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLAVASL*WFGDAV
Trigger: TACTGCATCCCCGAACCAGCAGAGCGAAGCTACTGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCTAGCTGCCAGATCTaGTCTTCACTCAGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLASCQI*SSLREV
Trigger: GACCTCCCTGAGTGAAGAGCAGATCTGGCAGCTAGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTGTTGCAGTCTCACTTaGTTGGACAAGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVCCSLT*LDKGVG
Trigger: TCCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCAGGCTGTGCATAGATaGTCTGGTGGTATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVQAVHR*SGGIPG
Trigger: CCCTGGAATACCACCAGAGCATCTATGCACAGCCTG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCTGCCAGACAGGCTGTaGATAGATGCTCTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVLPDRL*IDALVV
Trigger: TACCACCAGAGCATCTATGCACAGCCTGTCTGGCAG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAATCGTGGTTTGGTCCTaGGAGTCTGCCAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLIVVWS*ESARQA
Trigger: AGCCTGTCTGGCAGACTCGCAGGACCAAACCACGAT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGAAGTCCCCCATGACTaGCACACAATGGTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLEVPHD*HTMVAP
Trigger: AGGAGCCACCATTGTGTGGCAGTCATGGGGGACTTC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACATGGGTGCTATCTCTaGCCAGGAATTACTGCGGGG +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLHGCYL*PGITAG
Trigger: CCCCGCAGTAATTCCTGGGCAGAGATAGCACCCATG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGGCGCAGTTCATTTCTaGCCCCAACTGCATAGAGGT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVGAVHF*PQLHRG
Trigger: ACCTCTATGCAGTTGGGGGCAGAAATGAACTGCGCC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTGGAAGGAAGCATGCTaGTATTCCATTGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMWKEAC*YSIGSK
Trigger: TTTGCTTCCAATGGAATAGCAGCATGCTTCCTTCCA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACCCTTCTCTGCAGCATaGGGCTACGGCTTATCCACT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLPFSAA*GYGLST
Trigger: AGTGGATAAGCCGTAGCCCCATGCTGCAGAGAAGGG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp TACAACGTGTCCACTGGTCAGTGTCTATGTTGTAAGAATCTATATGGCGCACAATTTGTACAGCAGCCATaGAATGGTAGACCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: YNVSTGQCLCCKNLYGAQFVQQP*NGRPFS
Trigger: AGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAA...TTGTGCGCCATATAGATTCTTACAACATAGACACTGACCAGTGGACACGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACTCCTTGATGCACAATaGCTCTGCTTCGCCCCACGA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLLLDAQ*LCFAPR
Trigger: TCGTGGGGCGAAGCAGAGCCATTGTGCATCAAGGAG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCACTGGAATCGTGGTTTaGTCCTGCGAGTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVTGIVV*SCESAR
Trigger: TCTGGCAGACTCGCAGGACCAAACCACGATTCCAGT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACCCGGCAGTTTTTCATaGGTGCTATCTCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLPGSFS*VLSLPR
Trigger: CCTGGGCAGAGATAGCACCCATGAAAAACTGCCGGG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCACTGTAGGCAGAACCTaGCGCAGTTCATTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVTVGRT*RSSFLP
Trigger: GGGCAGAAATGAACTGCGCCAGGTTCTGCCTACAGT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTCCATTTGTTCTTCTTaGGGCAATATCGCTCAACTG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMSICSS*GNIAQL
Trigger: CAGTTGAGCGATATTGCCCCAAGAAGAACAAATGGA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGACTCCAGATTCATTTTaGCCAGTCAGCAGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMTPDSF*PVSRLK
Trigger: TTTCAACCTGCTGACTGGCCAAAATGAATCTGGAGT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCAAGACAAGGAAGCATaGAGCACTGAGTCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMQDKEA*STESFH
Trigger: ATGAAAAGACTCAGTGCTCCATGCTTCCTTGTCTTG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCATTTCTTGAATACTaGGGCAGCGTTCAGACGGCA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVAFLEY*GSVQTA
Trigger: TGCCGTCTGAACGCTGCCTCAGTATTCAAGAAATGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAGGACACTGTCATTGTaGGATTCGGAGTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLRTLSL*DSEWQS
Trigger: GCTCTGCCACTCCGAATCTCACAATGACAGTGTCCT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCTAGGACTGCCTTGTaGGCATGGAATTTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVARTAL*AWNFCS
Trigger: GGAACAGAAATTCCATGCTCACAAGGCAGTCCTAGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp GTCTATGTTGTAAGAATCTATATGGCGCACAAGGATCCGGTCATTATTGTAGTCCCACCATACAAAGACTaGACATTGCCCGGAAATAGT +
Preference number: 4 (lower is better)
Translates to: VYVVRIYMAHKDPVIIVVPPYKD*TLPGNS
Trigger: ACTATTTCCGGGCAATGTTCAGTCTTTGTATGGTGG...GACTACAATAATGACCGGATCCTTGTGCGCCATATAGATTCTTACAACATAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGACCATTAGCCTGTTCTaGTATTGTGCCGTATTAGTT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMTISLF*YCAVLV
Trigger: AACTAATACGGCACAATATCAGAACAGGCTAATGGT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGATCTGTCAAAGGACTaGACAAAAGTCCATTTGTTC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMDLSKD*TKVHLF
Trigger: GAACAAATGGACTTTTGTTCAGTCCTTTGACAGATC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGATTAGTTACTCCACCTaGTATCCAAAGAAGACCATC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMISYST*YPKKTI
Trigger: GATGGTCTTCTTTGGATATCAGGTGGAGTAACTAAT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGGCCAGTCAGCAGGTTaGAATTACAACGTGTCCACT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVGQSAG*NYNVST
Trigger: AGTGGACACGTTGTAATTTCAACCTGCTGACTGGCC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGAATATGTATTGGTGGTaGAGAATTCCACAAGCACTC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMNMYWW*RIPQAL
Trigger: GAGTGCTTGTGGAATTCTTCACCACCAATACATATT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACCCGGAAATAGTCACTaGATGCTGCTAGGACTGCCT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLPGNSH*MLLGLP
Trigger: AGGCAGTCCTAGCAGCATGCAGTGACTATTTCCGGG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCAAACTCCAGAGCCTaGTTTAAGCCAAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLANSRA*FKPRLV
Trigger: GACCAGCCTTGGCTTAAAGCAGGCTCTGGAGTTTGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTGTAGTCTAGGTCATTaGCTCCAAGAACATAAAGCT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMCSLGH*LQEHKA
Trigger: AGCTTTATGTTCTTGGAGGCAATGACCTAGACTACA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCCAAAGCGGATGTATTaGAGGAGCTCGTCCATGTAC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVPKRMY*RSSSMY
Trigger: GTACATGGACGAGCTCCTGCAATACATCCGCTTTGG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATGTTGCAGTCTCACTTaGTTGGACAAGGGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLCCSLT*LDKGVG
Trigger: TCCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGTTGACAAGGGCTGTTaGAGTCTCACTTGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVVDKGC*SLTCLD
Trigger: GTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAAC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGGCGCAGTTCATTTCTaGCCCCAACTGCATAGAGGT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLGAVHF*PQLHRG
Trigger: ACCTCTATGCAGTTGGGGGCAGAAATGAACTGCGCC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGGGTATTTCAACAACTaGTGTTCCAGTGTATGTCTA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMGYFNN*CSSVCL
Trigger: TAGACATACACTGGAACAGCAGTTGTTGAAATACCC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCCGGAAATAGTCACTaGATGCTGCTAGGACTGCCT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVSGNSH*MLLGLP
Trigger: AGGCAGTCCTAGCAGCATGCAGTGACTATTTCCGGA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536676.5
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGATTCTGCTGATCCATTaGTTCTATCACTTTCCACTG +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMILLIH*FYHFPL
Trigger: CAGTGGAAAGTGATAGAAGCAATGGATCAGCAGAAT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGGCCTGTCCTGTGTATaGAAACTCCAGAGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLGLSCV*KLQSLL
Trigger: AAGCAGGCTCTGGAGTTTGCATACACAGGACAGGCC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCATCCTGGATCACACCTaGCTCCAGCAAAATCTGTCC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVILDHT*LQQNLS
Trigger: GGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGAT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369261.9
ENST00000544166.5
CDS-3UTR CCA 90 bp CCACTGGTCAGTGTCTATGTTGTAAGAATCTATATGGCGCACAAGGATCCGGTCCTTATCCACTTATTCTaGTTAGGTTCATACACCATT +
Preference number: 4 (lower is better)
Translates to: PLVSVYVVRIYMAHKDPVLIHLF*LGSYTI
Trigger: AATGGTGTATGAACCTAACCAGAATAAGTGGATAAG...GACCGGATCCTTGTGCGCCATATAGATTCTTACAACATAGACACTGACCAGTGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAACTGGAATCGTGGTTTaGTCCTGCGAGTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLTGIVV*SCESAR
Trigger: TCTGGCAGACTCGCAGGACCAAACCACGATTCCAGT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAACTGTAGGCAGAACCTaGCGCAGTTCATTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLTVGRT*RSSFLP
Trigger: GGGCAGAAATGAACTGCGCCAGGTTCTGCCTACAGT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTGTAAAATATGGAGCTaGAAGGAAGCATGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMCKIWS*KEACCY
Trigger: ATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCATTTCTTGAATACTaGGGCAGCGTTCAGACGGCA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLAFLEY*GSVQTA
Trigger: TGCCGTCTGAACGCTGCCTCAGTATTCAAGAAATGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCTAGGACTGCCTTGTaGGCATGGAATTTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLARTAL*AWNFCS
Trigger: GGAACAGAAATTCCATGCTCACAAGGCAGTCCTAGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTGGCAATGGCAGCTATaGGAGCATTCTCCTGATCAA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVWQWQL*EHSPDQ
Trigger: TTGATCAGGAGAATGCTCTCATAGCTGCCATTGCCA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGGCCAGTCAGCAGGTTaGAATTACAACGTGTCCACT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLGQSAG*NYNVST
Trigger: AGTGGACACGTTGTAATTTCAACCTGCTGACTGGCC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCACCCAGCACAAAATaGTCCCGGCAGTTTTTCATG +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLAPSTK*SRQFFM
Trigger: CATGAAAAACTGCCGGGAGCATTTTGTGCTGGGTGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCAGCTGGAAGGAAGCATaGTGCTATTCCATTGGAAGC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVSWKEA*CYSIGS
Trigger: GCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTGGCTTTTCAGATGGTaGCAATCCTGTGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVWLFRW*QSCDEA
Trigger: TGCCTCATCACAGGATTGGCACCATCTGAAAAGCCA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGAAAGTGTACAAAGAATaGTCTAAAGACCCATGGAAC +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMKVYKE*SKDPWN
Trigger: GTTCCATGGGTCTTTAGAGCATTCTTTGTACACTTT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAATCCTGGATCACACCTaGCTCCAGCAAAATCTGTCC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLILDHT*LQQNLS
Trigger: GGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGAT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369261.9
ENST00000544166.5
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTACAGAGTGTCTGACTaGAATCGTGGTTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVYRVSD*NRGLVL
Trigger: CAGGACCAAACCACGATTCCAGTCAGACACTCTGTA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCCACATATCCAGCATaGCATGAAAGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVATYPA*HERDLS
Trigger: TGACAGATCCCTTTCATGCCATGCTGGATATGTGGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCTTACATCCAGTACCTaGATACAAGCCAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVLTSST*IQARGS
Trigger: TGAGCCTCTGGCTTGTATCCAGGTACTGGATGTAAG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCTTGGCTTTTCAGATaGTGCCAATCCTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVAWLFR*CQSCDE
Trigger: CTCATCACAGGATTGGCACCATCTGAAAAGCCAAGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACTTGCAGAAGAGGCATaGCCTGTCCTGTGTATGCAA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLLAEEA*PVLCMQ
Trigger: TTGCATACACAGGACAGGCCATGCCTCTTCTGCAAG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCCACCATACAAAGACTaGACATTGCCCGGAAATAGT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVPPYKD*TLPGNS
Trigger: ACTATTTCCGGGCAATGTTCAGTCTTTGTATGGTGG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369261.9
ENST00000544166.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGTTACTCCACCTGGATaGGATAGTGGGAGCATAAAT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVVTPPG*DSGSIN
Trigger: ATTTATGCTCCCACTATCTCATCCAGGTGGAGTAAC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544166.5
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATGGCAATGGCAGCTATaGGAGCATTCTCCTGATCAA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLWQWQL*EHSPDQ
Trigger: TTGATCAGGAGAATGCTCTCATAGCTGCCATTGCCA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCATATCCAGCATGGCATaGAAGGGATCTGTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVISSMA*KGSVKG
Trigger: TCCTTTGACAGATCCCTTTCATGCCATGCTGGATAT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCCACCATACAAAGACTaGACATTGCCTCTATACCCA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVPPYKD*TLPLYP
Trigger: TGGGTATAGAGGCAATGTTCAGTCTTTGTATGGTGG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCAGCCTTAGAAGTGTaGAGAGGAATCAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVSALEV*RGISKH
Trigger: ATGCTTGCTGATTCCTCTGCACACTTCTAAGGCTGA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCAGTTTTTCATGGGTaGTATCTCTGCCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVAVFHG*YLCPGI
Trigger: AATTCCTGGGCAGAGATAGCACCCATGAAAAACTGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAGCTGGAAGGAAGCATaGTGCTATTCCATTGGAAGC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLSWKEA*CYSIGS
Trigger: GCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATGGCTTTTCAGATGGTaGCAATCCTGTGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLWLFRW*QSCDEA
Trigger: TGCCTCATCACAGGATTGGCACCATCTGAAAAGCCA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGTCGCGCGGGGAAACTaGTCCCTAGTAAATAAAAAG +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLVARGN*SLVNKK
Trigger: CTTTTTATTTACTAGGGAGCAGTTTCCCCGCGCGAC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCATTAGTTACTCCACCTaGCAGATCTGCTCTTCACTC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVISYST*QICSSL
Trigger: GAGTGAAGAGCAGATCTGGCAGGTGGAGTAACTAAT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCTTATCCACTTATTCTaGTTAGGTTCATACACCATT +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMLIHLF*LGSYTI
Trigger: AATGGTGTATGAACCTAACCAGAATAAGTGGATAAG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTTTGTACAGCAGCCATaGAATGGTAGACCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVFVQQP*NGRPFS
Trigger: AGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATACAGAGTGTCTGACTaGAATCGTGGTTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLYRVSD*NRGLVL
Trigger: CAGGACCAAACCACGATTCCAGTCAGACACTCTGTA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCCACATATCCAGCATaGCATGAAAGGGATCTGTCA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLATYPA*HERDLS
Trigger: TGACAGATCCCTTTCATGCCATGCTGGATATGTGGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACTTACATCCAGTACCTaGATACAAGCCAGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLLTSST*IQARGS
Trigger: TGAGCCTCTGGCTTGTATCCAGGTACTGGATGTAAG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCTGTTCATGATGGCTTaGCTTTTCAGATGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVLFMMA*LFRWCQ
Trigger: TTGGCACCATCTGAAAAGCCAAGCCATCATGAACAG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTGCTCTAAAGACCCATaGAACACAATATACCTTAAA +
Preference number: 4 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMCSKDP*NTIYLK
Trigger: TTTAAGGTATATTGTGTTCCATGGGTCTTTAGAGCA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGATATACAGAGTGTCTaGCTGGAATCGTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLDIQSV*LESWFG
Trigger: ACCAAACCACGATTCCAGTCAGACACTCTGTATATC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCTTTTTCCCACCAATaGTATACAGAGTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVAFSHQ*YTECLT
Trigger: AGTCAGACACTCTGTATATCATTGGTGGGAAAAAGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCATGAGAGCATTCTCCTaGTCAACAGGATTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVMRAFS*STGLKY
Trigger: GTACTTCAATCCTGTTGATCAGGAGAATGCTCTCAT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAATATCCAGCATGGCATaGAAGGGATCTGTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLISSMA*KGSVKG
Trigger: TCCTTTGACAGATCCCTTTCATGCCATGCTGGATAT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTTTTCCTCCTGTTCATaGTGGCTTGGCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVFSSCS*WLGFSD
Trigger: ATCTGAAAAGCCAAGCCATCATGAACAGGAGGAAAA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATGTAAAGTTAGGTTCTaGCCCAAGGTCAGAGTAACC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLCKVRF*PKVRVT
Trigger: GGTTACTCTGACCTTGGGTCAGAACCTAACTTTACA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAATCTGTCCTGTGTATaGAAACTCCAGAGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLNLSCV*KLQSLL
Trigger: AAGCAGGCTCTGGAGTTTGCATACACAGGACAGATT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369261.9
ENST00000544166.5
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCCTGTTCTGATATTGTaGCGTATTAGTTACTCCACC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVPVLIL*RISYST
Trigger: GGTGGAGTAACTAATACGGCACAATATCAGAACAGG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATCAGCCTTAGAAGTGTaGAGAGGAATCAGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLSALEV*RGISKH
Trigger: ATGCTTGCTGATTCCTCTGCACACTTCTAAGGCTGA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCAGTTTTTCATGGGTaGTATCTCTGCCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLAVFHG*YLCPGI
Trigger: AATTCCTGGGCAGAGATAGCACCCATGAAAAACTGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAATTTCTGCCCCCAACTaGATAGAGGTATTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLISAPN*IEVFLH
Trigger: ATGGAGGAATACCTCTATGCAGTTGGGGGCAGAAAT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACTTCTTTGCCTTCTCTaGTTACATCCAGTACCTGGA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLLLCLL*LHPVPG
Trigger: TCCAGGTACTGGATGTAAGCAGAGAAGGCAAAGAAG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTGGAAGGAAGCATGCTaGTATTCCATTGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVWKEAC*YSIGSK
Trigger: TTTGCTTCCAATGGAATAGCAGCATGCTTCCTTCCA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATTTGTACAGCAGCCATaGAATGGTAGACCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLFVQQP*NGRPFS
Trigger: AGAGAAGGGTCTACCATTCCATGGCTGCTGTACAAA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGACAGGGCAACTGTATaGAGAGTATCCACATCCATT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLDRATV*RVSTSI
Trigger: AATGGATGTGGATACTCTCCATACAGTTGCCCTGTC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCACTCCAGATTCATTTTaGCCAGTCAGCAGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVTPDSF*PVSRLK
Trigger: TTTCAACCTGCTGACTGGCCAAAATGAATCTGGAGT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACTGTTCATGATGGCTTaGCTTTTCAGATGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLLFMMA*LFRWCQ
Trigger: TTGGCACCATCTGAAAAGCCAAGCCATCATGAACAG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GTTGAAATTACAACGTGTCCACTGGTCAGTGTCTATGTTGTAAGAATCTATATGACCATTAGCCTGTTCTaGTATTGTGCCGTATTAGTT +
Preference number: 4 (lower is better)
Translates to: VEITTCPLVSVYVVRIYMTISLF*YCAVLV
Trigger: AACTAATACGGCACAATATCAGAACAGGCTAATGGT...CATATAGATTCTTACAACATAGACACTGACCAGTGGACACGTTGTAATTTCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCTTTTTCCCACCAATaGTATACAGAGTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLAFSHQ*YTECLT
Trigger: AGTCAGACACTCTGTATATCATTGGTGGGAAAAAGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAATGAGAGCATTCTCCTaGTCAACAGGATTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLMRAFS*STGLKY
Trigger: GTACTTCAATCCTGTTGATCAGGAGAATGCTCTCAT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATTTTCCTCCTGTTCATaGTGGCTTGGCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLFSSCS*WLGFSD
Trigger: ATCTGAAAAGCCAAGCCATCATGAACAGGAGGAAAA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCAGAGGGATTCCTGAATaGTTAAACTGCCAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVRGIPE*LNCQGK
Trigger: TTTTCCTTGGCAGTTTAATCATTCAGGAATCCCTCT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACCTGTTCTGATATTGTaGCGTATTAGTTACTCCACC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLPVLIL*RISYST
Trigger: GGTGGAGTAACTAATACGGCACAATATCAGAACAGG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATGGAAGGAAGCATGCTaGTATTCCATTGGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLWKEAC*YSIGSK
Trigger: TTTGCTTCCAATGGAATAGCAGCATGCTTCCTTCCA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCACAAAGACTGAACATTaGCTCTATACCCATTCTGCT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVTKTEH*LYTHSA
Trigger: AGCAGAATGGGTATAGAGGCAATGTTCAGTCTTTGT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAACTCCAGATTCATTTTaGCCAGTCAGCAGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLTPDSF*PVSRLK
Trigger: TTTCAACCTGCTGACTGGCCAAAATGAATCTGGAGT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTGTAAAATATGGAGCTaGAAGGAAGCATGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVCKIWS*KEACCY
Trigger: ATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAACCATTAGCCTGTTCTaGTATTGTGCCGTATTAGTT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLTISLF*YCAVLV
Trigger: AACTAATACGGCACAATATCAGAACAGGCTAATGGT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGATCTGTCAAAGGACTaGACAAAAGTCCATTTGTTC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLDLSKD*TKVHLF
Trigger: GAACAAATGGACTTTTGTTCAGTCCTTTGACAGATC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAATTAGTTACTCCACCTaGTATCCAAAGAAGACCATC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLISYST*YPKKTI
Trigger: GATGGTCTTCTTTGGATATCAGGTGGAGTAACTAAT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAATATGTATTGGTGGTaGAGAATTCCACAAGCACTC +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLNMYWW*RIPQAL
Trigger: GAGTGCTTGTGGAATTCTTCACCACCAATACATATT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAGAGGGATTCCTGAATaGTTAAACTGCCAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLRGIPE*LNCQGK
Trigger: TTTTCCTTGGCAGTTTAATCATTCAGGAATCCCTCT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR TCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTATCACTTTCCACTaGTTGATAATCTGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVSITFH*LIICSE
Trigger: TTCACTGCAGATTATCAATCAGTGGAAAGTGATAGA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATGTAGTCTAGGTCATTaGCTCCAAGAACATAAAGCT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLCSLGH*LQEHKA
Trigger: AGCTTTATGTTCTTGGAGGCAATGACCTAGACTACA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCAAAGTGTACAAAGAATaGTCTAAAGACCCATGGAAC +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVKVYKE*SKDPWN
Trigger: GTTCCATGGGTCTTTAGAGCATTCTTTGTACACTTT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTATATTCTCCCATTATaGACAGCAACTCCAGATTCA +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVYILPL*TATPDS
Trigger: TGAATCTGGAGTTGCTGTCCATAATGGGAGAATATA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR GCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAGAATACTTCTTCTTTaGCTTCTCTGCTTACATCCA +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLRILLL*LLCLHP
Trigger: TGGATGTAAGCAGAGAAGGCAAAGAAGAAGTATTCT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCTTATCCACTTATTCTaGTTAGGTTCATACACCATT +
Preference number: 4 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVLIHLF*LGSYTI
Trigger: AATGGTGTATGAACCTAACCAGAATAAGTGGATAAG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CCA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACTTATCCACTTATTCTaGTTAGGTTCATACACCATT +
Preference number: 4 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLLIHLF*LGSYTI
Trigger: AATGGTGTATGAACCTAACCAGAATAAGTGGATAAG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS GCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTGCGTGCGTGTGTaGGCGCGACTGCCTGCGCGCTCCCGAACTGTCGCGCGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCVCACVRV*ARLPARSRTVARGN
Trigger: GTTTCCCCGCGCGACAGTTCGGGAGCGCGCAGGCAGTCGCGCGCACACACGCACGCAGGCACACACACACACACACACACACACACACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 90 bp GTGTGTGTGTGTGTGTGCCTGCGTGCGTGTGTGCGCGCGACTGCCTaGGCGCTCCCGAACTGTCGCGCGGGGAAACTGCTCCCTAGTAAA +
Preference number: 5 (lower is better)
Translates to: VCVCVCLRACVRATA*ALPNCRAGKLLPSK
Trigger: TTTACTAGGGAGCAGTTTCCCCGCGCGACAGTTCGGGAGCGCGCAGGCAGTCGCGCGCACACACGCACGCAGGCACACACACACACACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 90 bp GTGCGAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTaGGTGCGTGTGTGCGCGCGACTGCCTGCGCGCTCCCGAACTGTC +
Preference number: 5 (lower is better)
Translates to: VRKCVCVCVCVCVCA*VRVCARLPARSRTV
Trigger: GACAGTTCGGGAGCGCGCAGGCAGTCGCGCGCACACACGCACGCAGGCACACACACACACACACACACACACACACACACACTTTCGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 90 bp GTGTGTGCGAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGCTGCGTGCGTGTGTGCGCGCGACTGCCTGCGCGCTCCCGAAC +
Preference number: 5 (lower is better)
Translates to: VCAKVCVCVCVCVCV*LRACVRATACALPN
Trigger: GTTCGGGAGCGCGCAGGCAGTCGCGCGCACACACGCACGCAGGCACACACACACACACACACACACACACACACACACTTTCGCACACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 90 bp CGCCCCACGATGCTGAGGTTAACAGAACCCGCAGTAGCTTCGCTCTaGTGGTTCGGGGATGCAGTAGCGAAGACGAGCGTCCTAGCGTGT +
Preference number: 5 (lower is better)
Translates to: RPTMLRLTEPAVASL*WFGDAVAKTSVLAC
Trigger: ACACGCTAGGACGCTCGTCTTCGCTACTGCATCCCCGAACCAGCAGAGCGAAGCTACTGCGGGTTCTGTTAACCTCAGCATCGTGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS CCA 90 bp CCTCCTGCCACAAACAGGAAGTCCCCCATGACTGCCACACAATGGTaGCTCCTTCCCACAGGCATGGGAGCCAGCTCACTCCAGTTGGCA +
Preference number: 5 (lower is better)
Translates to: PPATNRKSPMTATQW*LLPTGMGASSLQLA
Trigger: TGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGGGGGACTTCCTGTTTGTGGCAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp CACACAATGGTGGCTCCTTCCCACAGGCATGGGAGCCAGCTCACTCCAGTTGGCGACTGGAATCGTGGTTaGGTCCTGCGAGTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: HTMVAPSHRHGSQLTPVGDWNRG*VLRVCQ
Trigger: CTGGCAGACTCGCAGGACCAAACCACGATTCCAGTC...GCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS TCA 90 bp TGGCATGCTCAACTTCCCCTCCTGCCACAAACAGGAAGTCCCCCATaGCTGCCACACAATGGTGGCTCCTTCCCACAGGCATGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: WHAQLPLLPQTGSPP*LPHNGGSFPQAWEP
Trigger: TGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGGGGGACTTCCTGTTTGTGGCAGGAGGGGAAGTTGAGCATGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS GCA 90 bp ATGCTCAACTTCCCCTCCTGCCACAAACAGGAAGTCCCCCATGACTaGCACACAATGGTGGCTCCTTCCCACAGGCATGGGAGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: MLNFPSCHKQEVPHD*HTMVAPSHRHGSQL
Trigger: GAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGGGGGACTTCCTGTTTGTGGCAGGAGGGGAAGTTGAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS CCA 90 bp CCCACGATGCTGAGGTTAACAGAACCCGCAGTAGCTTCGCTCTGCTaGTTCGGGGATGCAGTAGCGAAGACGAGCGTCCTAGCGTGTTTG +
Preference number: 5 (lower is better)
Translates to: PTMLRLTEPAVASLC*FGDAVAKTSVLACL
Trigger: CAAACACGCTAGGACGCTCGTCTTCGCTACTGCATCCCCGAACCAGCAGAGCGAAGCTACTGCGGGTTCTGTTAACCTCAGCATCGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS TCA 90 bp AGACAGGCTGTGCATAGATGCTCTGGTGGTATTCCAGGGCCTCGTTaGCAAGGGCTGTTGCAGTCTCACTTGCTTGGACAAGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RQAVHRCSGGIPGPR*QGLLQSHLLGQGGG
Trigger: CCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAGAGCATCTATGCACAGCCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000447886.1
ENST00000536676.5
ENST00000539200.5
CDS GCA 90 bp GGTGATGTCGCAGAGGATGCCATCACTCCTCTGCTGATTCAGCGCTaGCAGGACACTGTCATTGTGAGATTCGGAGTGGCAGAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: GDVAEDAITPLLIQR*QDTVIVRFGVAEPL
Trigger: CAGAGGCTCTGCCACTCCGAATCTCACAATGACAGTGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGGCATCCTCTGCGACATCACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369254.5
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 90 bp GAGGTTAACAGAACCCGCAGTAGCTTCGCTCTGCTGGTTCGGGGATaGAGTAGCGAAGACGAGCGTCCTAGCGTGTTTGTGTGTGCGAAA +
Preference number: 5 (lower is better)
Translates to: EVNRTRSSFALLVRG*SSEDERPSVFVCAK
Trigger: TTTCGCACACACAAACACGCTAGGACGCTCGTCTTCGCTACTGCATCCCCGAACCAGCAGAGCGAAGCTACTGCGGGTTCTGTTAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 90 bp CGGCATTTTCCAGCTGGGTTCCTCAGGTTCTCAGCCTTAGAAGTGTaGAGAGGAATCAGCAAGCATTCCAGCCGATGGGGTGAGCGGTCT +
Preference number: 5 (lower is better)
Translates to: RHFPAGFLRFSALEV*RGISKHSSRWGERS
Trigger: AGACCGCTCACCCCATCGGCTGGAATGCTTGCTGATTCCTCTGCACACTTCTAAGGCTGAGAACCTGAGGAACCCAGCTGGAAAATGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 90 bp GTGGTATTCCAGGGCCTCGTTGACAAGGGCTGTTGCAGTCTCACTTaGTTGGACAAGGGGGTGGGACAGGGCAACTGTATGGAGAGTATC +
Preference number: 5 (lower is better)
Translates to: VVFQGLVDKGCCSLT*LDKGVGQGNCMESI
Trigger: GATACTCTCCATACAGTTGCCCTGTCCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000447886.1
ENST00000536676.5
ENST00000539200.5
CDS GCA 90 bp ATAGATGCTCTGGTGGTATTCCAGGGCCTCGTTGACAAGGGCTGTTaGAGTCTCACTTGCTTGGACAAGGGGGTGGGACAGGGCAACTGT +
Preference number: 5 (lower is better)
Translates to: IDALVVFQGLVDKGC*SLTCLDKGVGQGNC
Trigger: ACAGTTGCCCTGTCCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAGAGCATCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000447886.1
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp TGCATAGATGCTCTGGTGGTATTCCAGGGCCTCGTTGACAAGGGCTGTTGCAGTCTGTTGCAGTCTCACTaGCTTGGACAAGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: CIDALVVFQGLVDKGCCSLLQSH*LGQGGG
Trigger: CCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAG...ACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAGAGCATCTATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR CAA 90 bp TGTCTGACTGGAATCGTGGTTTGGTCCTGCGAGTCTGCCAGACAGGCTGTGCATAAGTACCGAAGTTCCTaGACCTTGCAGACCTCGCGC +
Preference number: 5 (lower is better)
Translates to: CLTGIVVWSCESARQAVHKYRSS*TLQTSR
Trigger: GCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTT...ATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGACTGGAGACGCACCTaGGCACCCCCGGGGCGGGTT +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMDWRRT*APPGRV
Trigger: AACCCGCCCCGGGGGTGCCAAGGTGCGTCTCCAGTC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 90 bp CTCAACTGTAGGCAGAACCTGGCGCAGTTCATTTCTGCCCCCAACTaGATAGAGGTATTCCTCCATGGCACCCAGCACAAAATGCTCCCG +
Preference number: 5 (lower is better)
Translates to: LNCRQNLAQFISAPN*IEVFLHGTQHKMLP
Trigger: CGGGAGCATTTTGTGCTGGGTGCCATGGAGGAATACCTCTATGCAGTTGGGGGCAGAAATGAACTGCGCCAGGTTCTGCCTACAGTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS CCA 90 bp TATTCCAGGGCCTCGTTGACAAGGGCTGTTGCAGTCTCACTTGCTTaGACAAGGGGGTGGGACAGGGCAACTGTATGGAGAGTATCCACA +
Preference number: 5 (lower is better)
Translates to: YSRASLTRAVAVSLA*TRGWDRATVWRVST
Trigger: TGTGGATACTCTCCATACAGTTGCCCTGTCCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000447886.1
ENST00000536676.5
ENST00000539200.5
CDS TCA 90 bp GGACTGCCTTGTGAGCATGGAATTTCTGTTCCTCAGCAATCAGGGTaGTGTCGCAGAGGATGCCATCACTCCTCTGCTGATTCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: GLPCEHGISVPQQSG*CRRGCHHSSADSAL
Trigger: CAGCGCTGAATCAGCAGAGGAGTGATGGCATCCTCTGCGACATCACCCTGATTGCTGAGGAACAGAAATTCCATGCTCACAAGGCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369254.5
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS CCA 90 bp GCAGTCTCACTTGCTTGGACAAGGGGGTGGGACAGGGCAACTGTATaGAGAGTATCCACATCCATTAGGCCAAAGCGGATGTATTGCAGG +
Preference number: 5 (lower is better)
Translates to: AVSLAWTRGWDRATV*RVSTSIRPKRMYCR
Trigger: CCTGCAATACATCCGCTTTGGCCTAATGGATGTGGATACTCTCCATACAGTTGCCCTGTCCCACCCCCTTGTCCAAGCAAGTGAGACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000447886.1
ENST00000536676.5
ENST00000539200.5
CDS CCA 90 bp TCGTTGACAAGGGCTGTTGCAGTCTCACTTGCTTGGACAAGGGGGTaGGACAGGGCAACTGTATGGAGAGTATCCACATCCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: SLTRAVAVSLAWTRG*DRATVWRVSTSIRP
Trigger: TGGCCTAATGGATGTGGATACTCTCCATACAGTTGCCCTGTCCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000447886.1
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GTTTGGTCCTGCGAGTCTGCCAGACAGGCTGTGCATAGATGCTCTGGTGGTATTGCCAAAGCGGATGTATaGCAGGAGCTCGTCCATGTA +
Preference number: 5 (lower is better)
Translates to: VWSCESARQAVHRCSGGIAKADV*QELVHV
Trigger: TACATGGACGAGCTCCTGCAATACATCCGCTTTGGC...AATACCACCAGAGCATCTATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR CAA 90 bp CAGACCTCGCGCTTTTTCCCACCAATGATATACAGAGTGTCTGACTGGAATCGTTGCAGTCTCACTTGCTaGGACAAGGGGGTGGGACAG +
Preference number: 5 (lower is better)
Translates to: QTSRFFPPMIYRVSDWNRCSLTC*DKGVGQ
Trigger: CTGTCCCACCCCCTTGTCCAAGCAAGTGAGACTGCA...ACGATTCCAGTCAGACACTCTGTATATCATTGGTGGGAAAAAGCGCGAGGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS GCA 90 bp TGCAGAAGAGGCATGGCCTGTCCTGTGTATGCAAACTCCAGAGCCTaGTTTAAGCCAAGGCTGGTCACACCGTGCAAATTAACCTCATCA +
Preference number: 5 (lower is better)
Translates to: CRRGMACPVYANSRA*FKPRLVTPCKLTSS
Trigger: TGATGAGGTTAATTTGCACGGTGTGACCAGCCTTGGCTTAAAGCAGGCTCTGGAGTTTGCATACACAGGACAGGCCATGCCTCTTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTGCAGTCTCACTTGCTaGGACAAGGGGGTGGGACAG +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMCSLTC*DKGVGQ
Trigger: CTGTCCCACCCCCTTGTCCAAGCAAGTGAGACTGCA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp CTCACTCCAGTTGGCAATGGCAGCTATGAGAGCATTCTCCTGATCAACAGGATTCGAAGTTCCTTGACCTaGCAGACCTCGCGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LTPVGNGSYESILLINRIRSSLT*QTSRFF
Trigger: GAAAAAGCGCGAGGTCTGCAAGGTCAAGGAACTTCG...AATCCTGTTGATCAGGAGAATGCTCTCATAGCTGCCATTGCCAACTGGAGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447886.1
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGACTGGAGACGCACCTaGGCACCCCCGGGGCGGGTT +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLDWRRT*APPGRV
Trigger: AACCCGCCCCGGGGGTGCCAAGGTGCGTCTCCAGTC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS TCA 90 bp CATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATaGTGGCTTGGCTTTTCAGATGGTGCCAATCCTGTGATGAGGCAC +
Preference number: 5 (lower is better)
Translates to: HAQYPTVRAMFSSCS*WLGFSDGANPVMRH
Trigger: GTGCCTCATCACAGGATTGGCACCATCTGAAAAGCCAAGCCATCATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp CCACTGGTCAGTGTCTATGTTGTAAGAATCTATATGGCGCACAAGGATCCGGTCGCCTGTCAGCATTTCTaGAATACTGAGGCAGCGTTC +
Preference number: 5 (lower is better)
Translates to: PLVSVYVVRIYMAHKDPVACQHF*NTEAAF
Trigger: GAACGCTGCCTCAGTATTCAAGAAATGCTGACAGGC...GACCGGATCCTTGTGCGCCATATAGATTCTTACAACATAGACACTGACCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGAGCGTCCTAGCGTGTTaGTGTGTGCGAAAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMSVLAC*CVRKCV
Trigger: CACACACTTTCGCACACACAAACACGCTAGGACGCT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCGAAGTTCCTTGACCTaGCAGACCTCGCGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMRSSLT*QTSRFF
Trigger: GAAAAAGCGCGAGGTCTGCAAGGTCAAGGAACTTCG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS CCA 90 bp GTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGATGGCTTaGCTTTTCAGATGGTGCCAATCCTGTGATGAGGCACTTGAAGAG +
Preference number: 5 (lower is better)
Translates to: VSNSQSYVFLLFMMA*LFRWCQSCDEALEE
Trigger: CTCTTCAAGTGCCTCATCACAGGATTGGCACCATCTGAAAAGCCAAGCCATCATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGCCTGTCAGCATTTCTaGAATACTGAGGCAGCGTTC +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMACQHF*NTEAAF
Trigger: GAACGCTGCCTCAGTATTCAAGAAATGCTGACAGGC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CAA 90 bp CATGGAATGGTAGACCCTTCTCTGCAGCATGGGGCTACGGCTTATCCACTTATTAACATAAAGCTTCCTTaGTACAGCAGCCATGGAATG +
Preference number: 5 (lower is better)
Translates to: HGMVDPSLQHGATAYPLINIKLP*YSSHGM
Trigger: CATTCCATGGCTGCTGTACAAAGGAAGCTTTATGTT...AATAAGTGGATAAGCCGTAGCCCCATGCTGCAGAGAAGGGTCTACCATTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369254.5
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGGCACCGGCCTCTCCTaGATGCACAATGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVGTGLS*MHNGSA
Trigger: AGCAGAGCCATTGTGCATCAAGGAGAGGCCGGTGCC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGTGGCCAGTCAGCAGGTaGAAATTACAACGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMWPVSR*KLQRVH
Trigger: GTGGACACGTTGTAATTTCAACCTGCTGACTGGCCA...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCCTGTTCATGATGGCTaGGCTTTTCAGATGGTGCCA +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMPVHDG*AFQMVP
Trigger: TGGCACCATCTGAAAAGCCAAGCCATCATGAACAGG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGGCACCGGCCTCTCCTaGATGCACAATGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLGTGLS*MHNGSA
Trigger: AGCAGAGCCATTGTGCATCAAGGAGAGGCCGGTGCC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCTGTTGCAGTCTCACTaGCTTGGACAAGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVLLQSH*LGQGGG
Trigger: CCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGACTGGAATCGTGGTTaGGTCCTGCGAGTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVDWNRG*VLRVCQ
Trigger: CTGGCAGACTCGCAGGACCAAACCACGATTCCAGTC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCCTGTGATGAGGCACTaGAAGAGTTTGAAGGTTAGG +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMPVMRH*KSLKVR
Trigger: CCTAACCTTCAAACTCTTCAAGTGCCTCATCACAGG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS GCA 90 bp TTGAAGGTTAGGGCATGTAAAATATGGAGCTGGAAGGAAGCATGCTaGTATTCCATTGGAAGCAAAAGGGAGTGTAGGCCCATAGAATAC +
Preference number: 5 (lower is better)
Translates to: LKVRACKIWSWKEAC*YSIGSKRECRPIEY
Trigger: GTATTCTATGGGCCTACACTCCCTTTTGCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACATGCCCTAACCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS GCA 90 bp AGTTTGAAGGTTAGGGCATGTAAAATATGGAGCTGGAAGGAAGCATaGTGCTATTCCATTGGAAGCAAAAGGGAGTGTAGGCCCATAGAA +
Preference number: 5 (lower is better)
Translates to: SLKVRACKIWSWKEA*CYSIGSKRECRPIE
Trigger: TTCTATGGGCCTACACTCCCTTTTGCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACATGCCCTAACCTTCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS CCA 90 bp AGGCACTTGAAGAGTTTGAAGGTTAGGGCATGTAAAATATGGAGCTaGAAGGAAGCATGCTGCTATTCCATTGGAAGCAAAAGGGAGTGT +
Preference number: 5 (lower is better)
Translates to: RHLKSLKVRACKIWS*KEACCYSIGSKREC
Trigger: ACACTCCCTTTTGCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACATGCCCTAACCTTCAAACTCTTCAAGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATGCAGTCTCACTTGCTaGGACAAGGGGGTGGGACAG +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLCSLTC*DKGVGQ
Trigger: CTGTCCCACCCCCTTGTCCAAGCAAGTGAGACTGCA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACTGTTGCAGTCTCACTaGCTTGGACAAGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLLLQSH*LGQGGG
Trigger: CCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGACTGGAATCGTGGTTaGGTCCTGCGAGTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLDWNRG*VLRVCQ
Trigger: CTGGCAGACTCGCAGGACCAAACCACGATTCCAGTC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCAAGTACCGAAGTTCCTaGACCTTGCAGACCTCGCGC +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVKYRSS*TLQTSR
Trigger: GCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGGTCCATTTGTTCTTCTaGGGGCAATATCGCTCAACT +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMVHLFF*GQYRST
Trigger: AGTTGAGCGATATTGCCCCAAGAAGAACAAATGGAC...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGAACTCCAGATTCATTTaGGCCAGTCAGCAGGTTGAA +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMNSRFI*ASQQVE
Trigger: TTCAACCTGCTGACTGGCCAAAATGAATCTGGAGTT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGCATGCTGCTATTCCATaGGAAGCAAAAGGGAGTGTA +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMHAAIP*EAKGSV
Trigger: TACACTCCCTTTTGCTTCCAATGGAATAGCAGCATG...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCAGCGTCCTAGCGTGTTaGTGTGTGCGAAAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVSVLAC*CVRKCV
Trigger: CACACACTTTCGCACACACAAACACGCTAGGACGCT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCCAAAGCGGATGTATaGCAGGAGCTCGTCCATGTA +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVAKADV*QELVHV
Trigger: TACATGGACGAGCTCCTGCAATACATCCGCTTTGGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAAGTACCGAAGTTCCTaGACCTTGCAGACCTCGCGC +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLKYRSS*TLQTSR
Trigger: GCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGAAGCCAGAGGCTCATTaGTCCAAATTGAATATCCAC +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMKPEAH*SKLNIH
Trigger: GTGGATATTCAATTTGGACAAATGAGCCTCTGGCTT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGAGGCACTTGAAGAGTTaGAAGGTTAGGGCATGTAAA +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMRHLKS*KVRACK
Trigger: TTTACATGCCCTAACCTTCAAACTCTTCAAGTGCCT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS TCA 90 bp CTTATCCACTTATTCTGGTTAGGTTCATACACCATTAGCCTGTTCTaGTATTGTGCCGTATTAGTTACTCCACCTGCCAGATCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: LIHLFWLGSYTISLF*YCAVLVTPPARSAL
Trigger: AAGAGCAGATCTGGCAGGTGGAGTAACTAATACGGCACAATATCAGAACAGGCTAATGGTGTATGAACCTAACCAGAATAAGTGGATAAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGCCTGTCAGCATTTCTaGAATACTGAGGCAGCGTTC +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVACQHF*NTEAAF
Trigger: GAACGCTGCCTCAGTATTCAAGAAATGCTGACAGGC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAGCGTCCTAGCGTGTTaGTGTGTGCGAAAGTGTGTG +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLSVLAC*CVRKCV
Trigger: CACACACTTTCGCACACACAAACACGCTAGGACGCT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCCAAAGCGGATGTATaGCAGGAGCTCGTCCATGTA +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLAKADV*QELVHV
Trigger: TACATGGACGAGCTCCTGCAATACATCCGCTTTGGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACGAAGTTCCTTGACCTaGCAGACCTCGCGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLRSSLT*QTSRFF
Trigger: GAAAAAGCGCGAGGTCTGCAAGGTCAAGGAACTTCG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTGGCCAGTCAGCAGGTaGAAATTACAACGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVWPVSR*KLQRVH
Trigger: GTGGACACGTTGTAATTTCAACCTGCTGACTGGCCA...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCCTGTTCATGATGGCTaGGCTTTTCAGATGGTGCCA +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVPVHDG*AFQMVP
Trigger: TGGCACCATCTGAAAAGCCAAGCCATCATGAACAGG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GTCTTTTCATGCCCAGTATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATGAGATCATCGATGCCATaGTGTCCAATAAATTGCCTT +
Preference number: 5 (lower is better)
Translates to: VFSCPVSNSQSYVFLLFMRSSMP*CPINCL
Trigger: AAGGCAATTTATTGGACACAATGGCATCGATGATCT...CATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATACTGGGCATGAAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGCCTGTCAGCATTTCTaGAATACTGAGGCAGCGTTC +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLACQHF*NTEAAF
Trigger: GAACGCTGCCTCAGTATTCAAGAAATGCTGACAGGC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATGGCCAGTCAGCAGGTaGAAATTACAACGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLWPVSR*KLQRVH
Trigger: GTGGACACGTTGTAATTTCAACCTGCTGACTGGCCA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCCTGTGATGAGGCACTaGAAGAGTTTGAAGGTTAGG +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVPVMRH*KSLKVR
Trigger: CCTAACCTTCAAACTCTTCAAGTGCCTCATCACAGG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACCTGTTCATGATGGCTaGGCTTTTCAGATGGTGCCA +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLPVHDG*AFQMVP
Trigger: TGGCACCATCTGAAAAGCCAAGCCATCATGAACAGG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAGGATGTTGTATAGTCTaGCAGAAGAGGCATGGCCTG +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLGCCIV*QKRHGL
Trigger: CAGGCCATGCCTCTTCTGCAAGACTATACAACATCC...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCGTCCATTTGTTCTTCTaGGGGCAATATCGCTCAACT +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVVHLFF*GQYRST
Trigger: AGTTGAGCGATATTGCCCCAAGAAGAACAAATGGAC...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCAACTCCAGATTCATTTaGGCCAGTCAGCAGGTTGAA +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVNSRFI*ASQQVE
Trigger: TTCAACCTGCTGACTGGCCAAAATGAATCTGGAGTT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCATGCTGCTATTCCATaGGAAGCAAAAGGGAGTGTA +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVHAAIP*EAKGSV
Trigger: TACACTCCCTTTTGCTTCCAATGGAATAGCAGCATG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACCTGTGATGAGGCACTaGAAGAGTTTGAAGGTTAGG +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLPVMRH*KSLKVR
Trigger: CCTAACCTTCAAACTCTTCAAGTGCCTCATCACAGG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCCTCCCTATTTCCTCATaGTGTGTCTCTTTCACATGC +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVLPISS*CVSFTC
Trigger: GCATGTGAAAGAGACACACAATGAGGAAATAGGGAG...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCAGAGGAGCAAGGATGTaGTATAGTCTTGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVRGARM*YSLAEE
Trigger: CTCTTCTGCAAGACTATACAACATCCTTGCTCCTCT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS TCA 90 bp CTTATCCACTTATTCTGGTTAGGTTCATACACCATTAGCCTGTTCTaGTATTGTGCCGTATTAGTTACTCCACCTGATATCCAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: LIHLFWLGSYTISLF*YCAVLVTPPDIQRR
Trigger: TCTTCTTTGGATATCAGGTGGAGTAACTAATACGGCACAATATCAGAACAGGCTAATGGTGTATGAACCTAACCAGAATAAGTGGATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAACTCCAGATTCATTTaGGCCAGTCAGCAGGTTGAA +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLNSRFI*ASQQVE
Trigger: TTCAACCTGCTGACTGGCCAAAATGAATCTGGAGTT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCAAGCCAGAGGCTCATTaGTCCAAATTGAATATCCAC +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVKPEAH*SKLNIH
Trigger: GTGGATATTCAATTTGGACAAATGAGCCTCTGGCTT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACATGCTGCTATTCCATaGGAAGCAAAAGGGAGTGTA +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLHAAIP*EAKGSV
Trigger: TACACTCCCTTTTGCTTCCAATGGAATAGCAGCATG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATACCTGTACAAGTTTAGATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCAGGCACTTGAAGAGTTaGAAGGTTAGGGCATGTAAA +
Preference number: 5 (lower is better)
Translates to: DTCTSLDFEKLPISSLCVRHLKS*KVRACK
Trigger: TTTACATGCCCTAACCTTCAAACTCTTCAAGTGCCT...GACACACAATGAGGAAATAGGGAGTTTCTCAAAATCTAAACTTGTACAGGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACTCCCTATTTCCTCATaGTGTGTCTCTTTCACATGC +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLLPISS*CVSFTC
Trigger: GCATGTGAAAGAGACACACAATGAGGAAATAGGGAG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAAGCCAGAGGCTCATTaGTCCAAATTGAATATCCAC +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLKPEAH*SKLNIH
Trigger: GTGGATATTCAATTTGGACAAATGAGCCTCTGGCTT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTAAGGCACTTGAAGAGTTaGAAGGTTAGGGCATGTAAA +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLRHLKS*KVRACK
Trigger: TTTACATGCCCTAACCTTCAAACTCTTCAAGTGCCT...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTACATTCTGCTGATCCATaGCTTCTATCACTTTCCACT +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLHSADP*LLSLST
Trigger: AGTGGAAAGTGATAGAAGCAATGGATCAGCAGAATG...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS-3UTR CAA 90 bp GATTTTGAGAAACTCCCTATTTCCTCATTGTGTGTCTCTTTCACATGCTTTTTATCAAGGAAGGAGGCTTaGACTGACATTCACGAAATT +
Preference number: 5 (lower is better)
Translates to: DFEKLPISSLCVSFTCFLSRKEA*TDIHEI
Trigger: AATTTCGTGAATGTCAGTCAAAGCCTCCTTCCTTGA...TAAAAAGCATGTGAAAGAGACACACAATGAGGAAATAGGGAGTTTCTCAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS TCA 72 bp AAAGCCCTAGCCAGCACTGCAGGTGGCACGTCCCGCTaGCTCCGCCCCAGGCGGTCGCGTCAGACTGGAGAC +
Preference number: 6 (lower is better)
Translates to: KALASTAGGTSR*LRPRRSRQTGD
Trigger: GTCTCCAGTCTGACGCGACCGCCTGGGGCGGAGTCAGCGGGACGTGCCACCTGCAGTGCTGGCTAGGGCTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 72 bp TGTGTGTGTGTGCCTGCGTGCGTGTGTGCGCGCGACTaGCTGCGCGCTCCCGAACTGTCGCGCGGGGAAACT +
Preference number: 6 (lower is better)
Translates to: CVCVPACVCARD*LRAPELSRGET
Trigger: AGTTTCCCCGCGCGACAGTTCGGGAGCGCGCAGGCAGTCGCGCGCACACACGCACGCAGGCACACACACACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 72 bp TGTGTGTGTGTGTGTGTGTGTGCCTGCGTGCGTGTGTaGGCGCGACTGCCTGCGCGCTCCCGAACTGTCGCG +
Preference number: 6 (lower is better)
Translates to: CVCVCVCACVRV*ARLPARSRTVA
Trigger: CGCGACAGTTCGGGAGCGCGCAGGCAGTCGCGCGCACACACGCACGCAGGCACACACACACACACACACACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS TCA 72 bp GTGCCAGAGACGGCAGCGCAGGCACCGGCCTCTCCTTaGTGCACAATGGCTCTGCTTCGCCCCACGATGCTG +
Preference number: 6 (lower is better)
Translates to: VPETAAQAPASP*CTMALLRPTML
Trigger: CAGCATCGTGGGGCGAAGCAGAGCCATTGTGCATCAAGGAGAGGCCGGTGCCTGCGCTGCCGTCTCTGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS CAA 72 bp GGTGCCAGAGACGGCAGCGCAGGCACCGGCCTCTCCTaGATGCACAATGGCTCTGCTTCGCCCCACGATGCT +
Preference number: 6 (lower is better)
Translates to: GARDGSAGTGLS*MHNGSASPHDA
Trigger: AGCATCGTGGGGCGAAGCAGAGCCATTGTGCATCAAGGAGAGGCCGGTGCCTGCGCTGCCGTCTCTGGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS CAA 90 bp GCTGGGTTAGGTGCCAGAGACGGCAGCGCAGGCACCGGCCTCTCCTaGATGCACAATGGCTCTGCTTCGCCCCACGATGCTGAGGTTAAC +
Preference number: 6 (lower is better)
Translates to: AGLGARDGSAGTGLS*MHNGSASPHDAEVN
Trigger: GTTAACCTCAGCATCGTGGGGCGAAGCAGAGCCATTGTGCATCAAGGAGAGGCCGGTGCCTGCGCTGCCGTCTCTGGCACCTAACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 72 bp AAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGCTGCGTGCGTGTGTGCGCGCGACTGCCTGCGCG +
Preference number: 6 (lower is better)
Translates to: KVCVCVCVCVCV*LRACVRATACA
Trigger: CGCGCAGGCAGTCGCGCGCACACACGCACGCAGGCACACACACACACACACACACACACACACACACACTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 72 bp CAGGCAGTCCTCACAGCACACGTCCGGCCACTGGCATaGTCAACTTCCCCTCCTGCCACAAACAGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: QAVLTAHVRPLA*STSPPATNRKS
Trigger: GGACTTCCTGTTTGTGGCAGGAGGGGAAGTTGAGCATGCCAGTGGCCGGACGTGTGCTGTGAGGACTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS CCA 72 bp AGCGACAGGCAGTCCTCACAGCACACGTCCGGCCACTaGCATGCTCAACTTCCCCTCCTGCCACAAACAGGA +
Preference number: 6 (lower is better)
Translates to: SDRQSSQHTSGH*HAQLPLLPQTG
Trigger: TCCTGTTTGTGGCAGGAGGGGAAGTTGAGCATGCCAGTGGCCGGACGTGTGCTGTGAGGACTGCCTGTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS GCA 72 bp TTCCCCTCCTGCCACAAACAGGAAGTCCCCCATGACTaGCACACAATGGTGGCTCCTTCCCACAGGCATGGG +
Preference number: 6 (lower is better)
Translates to: FPSCHKQEVPHD*HTMVAPSHRHG
Trigger: CCCATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGGGGGACTTCCTGTTTGTGGCAGGAGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS TCA 72 bp CAACTTCCCCTCCTGCCACAAACAGGAAGTCCCCCATaGCTGCCACACAATGGTGGCTCCTTCCCACAGGCA +
Preference number: 6 (lower is better)
Translates to: QLPLLPQTGSPP*LPHNGGSFPQA
Trigger: TGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGGGGGACTTCCTGTTTGTGGCAGGAGGGGAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS GCA 72 bp AGAACCCGCAGTAGCTTCGCTCTGCTGGTTCGGGGATaGAGTAGCGAAGACGAGCGTCCTAGCGTGTTTGTG +
Preference number: 6 (lower is better)
Translates to: RTRSSFALLVRG*SSEDERPSVFV
Trigger: CACAAACACGCTAGGACGCTCGTCTTCGCTACTGCATCCCCGAACCAGCAGAGCGAAGCTACTGCGGGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 72 bp CTGGTGGTATTCCAGGGCCTCGTTGACAAGGGCTGTTaGAGTCTCACTTGCTTGGACAAGGGGGTGGGACAG +
Preference number: 6 (lower is better)
Translates to: LVVFQGLVDKGC*SLTCLDKGVGQ
Trigger: CTGTCCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000447886.1
ENST00000536676.5
ENST00000539200.5
CDS CCA 72 bp ACAAACAGGAAGTCCCCCATGACTGCCACACAATGGTaGCTCCTTCCCACAGGCATGGGAGCCAGCTCACTC +
Preference number: 6 (lower is better)
Translates to: TNRKSPMTATQW*LLPTGMGASSL
Trigger: GAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGGGGGACTTCCTGTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS GCA 72 bp ATGCTGAGGTTAACAGAACCCGCAGTAGCTTCGCTCTaGTGGTTCGGGGATGCAGTAGCGAAGACGAGCGTC +
Preference number: 6 (lower is better)
Translates to: MLRLTEPAVASL*WFGDAVAKTSV
Trigger: GACGCTCGTCTTCGCTACTGCATCCCCGAACCAGCAGAGCGAAGCTACTGCGGGTTCTGTTAACCTCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS CCA 72 bp CTGAGGTTAACAGAACCCGCAGTAGCTTCGCTCTGCTaGTTCGGGGATGCAGTAGCGAAGACGAGCGTCCTA +
Preference number: 6 (lower is better)
Translates to: LRLTEPAVASLC*FGDAVAKTSVL
Trigger: TAGGACGCTCGTCTTCGCTACTGCATCCCCGAACCAGCAGAGCGAAGCTACTGCGGGTTCTGTTAACCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 72 bp GCAGAGGATGCCATCACTCCTCTGCTGATTCAGCGCTaGCAGGACACTGTCATTGTGAGATTCGGAGTGGCA +
Preference number: 6 (lower is better)
Translates to: AEDAITPLLIQR*QDTVIVRFGVA
Trigger: TGCCACTCCGAATCTCACAATGACAGTGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGGCATCCTCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369254.5
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS CCA 72 bp AGGGCTGTTGCAGTCTCACTTGCTTGGACAAGGGGGTaGGACAGGGCAACTGTATGGAGAGTATCCACATCC +
Preference number: 6 (lower is better)
Translates to: RAVAVSLAWTRG*DRATVWRVSTS
Trigger: GGATGTGGATACTCTCCATACAGTTGCCCTGTCCCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000447886.1
ENST00000536676.5
ENST00000539200.5
CDS CAA 90 bp TGCTGGTTCGGGGATGCAGTAGCGAAGACGAGCGTCCTAGCGTGTTaGTGTGTGCGAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: CWFGDAVAKTSVLAC*CVRKCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACTTTCGCACACACAAACACGCTAGGACGCTCGTCTTCGCTACTGCATCCCCGAACCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 72 bp AGGCAGAACCTGGCGCAGTTCATTTCTGCCCCCAACTaGATAGAGGTATTCCTCCATGGCACCCAGCACAAA +
Preference number: 6 (lower is better)
Translates to: RQNLAQFISAPN*IEVFLHGTQHK
Trigger: TTTGTGCTGGGTGCCATGGAGGAATACCTCTATGCAGTTGGGGGCAGAAATGAACTGCGCCAGGTTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS CAA 72 bp GGGGATGCAGTAGCGAAGACGAGCGTCCTAGCGTGTTaGTGTGTGCGAAAGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 6 (lower is better)
Translates to: GDAVAKTSVLAC*CVRKCVCVCVC
Trigger: ACACACACACACACACACACACTTTCGCACACACAAACACGCTAGGACGCTCGTCTTCGCTACTGCATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS TCA 72 bp GTGCATAGATGCTCTGGTGGTATTCCAGGGCCTCGTTaGCAAGGGCTGTTGCAGTCTCACTTGCTTGGACAA +
Preference number: 6 (lower is better)
Translates to: VHRCSGGIPGPR*QGLLQSHLLGQ
Trigger: TTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAGAGCATCTATGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369261.9
ENST00000447886.1
ENST00000536676.5
ENST00000539200.5
CDS GCA 72 bp GGCATGGCCTGTCCTGTGTATGCAAACTCCAGAGCCTaGTTTAAGCCAAGGCTGGTCACACCGTGCAAATTA +
Preference number: 6 (lower is better)
Translates to: GMACPVYANSRA*FKPRLVTPCKL
Trigger: TAATTTGCACGGTGTGACCAGCCTTGGCTTAAAGCAGGCTCTGGAGTTTGCATACACAGGACAGGCCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS TCA 72 bp TGTGAGCATGGAATTTCTGTTCCTCAGCAATCAGGGTaGTGTCGCAGAGGATGCCATCACTCCTCTGCTGAT +
Preference number: 6 (lower is better)
Translates to: CEHGISVPQQSG*CRRGCHHSSAD
Trigger: ATCAGCAGAGGAGTGATGGCATCCTCTGCGACATCACCCTGATTGCTGAGGAACAGAAATTCCATGCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369254.5
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
CDS GCA 72 bp TCCAGAGCCTGCTTTAAGCCAAGGCTGGTCACACCGTaGAAATTAACCTCATCAGCTCCACTTTCCACCATA +
Preference number: 6 (lower is better)
Translates to: SRACFKPRLVTP*KLTSSAPLSTI
Trigger: TATGGTGGAAAGTGGAGCTGATGAGGTTAATTTGCACGGTGTGACCAGCCTTGGCTTAAAGCAGGCTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369254.5
ENST00000369261.9
ENST00000544166.5
ENST00000620278.1
CDS CAA 72 bp AACCCGTCTTTCGCCAACTCCTCAAGGAAGGAGGCTTaGACTGACATTCACGAAATTAGTGCAGCTCCCATC +
Preference number: 6 (lower is better)
Translates to: NPSFANSSRKEA*TDIHEISAAPI
Trigger: GATGGGAGCTGCACTAATTTCGTGAATGTCAGTCAAAGCCTCCTTCCTTGAGGAGTTGGCGAAAGACGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS CAA 90 bp AGAAAGAGAAACCCGTCTTTCGCCAACTCCTCAAGGAAGGAGGCTTaGACTGACATTCACGAAATTAGTGCAGCTCCCATCAGAGGAGCA +
Preference number: 6 (lower is better)
Translates to: RKRNPSFANSSRKEA*TDIHEISAAPIRGA
Trigger: TGCTCCTCTGATGGGAGCTGCACTAATTTCGTGAATGTCAGTCAAAGCCTCCTTCCTTGAGGAGTTGGCGAAAGACGGGTTTCTCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS GCA 72 bp AGGGCATGTAAAATATGGAGCTGGAAGGAAGCATGCTaGTATTCCATTGGAAGCAAAAGGGAGTGTAGGCCC +
Preference number: 6 (lower is better)
Translates to: RACKIWSWKEAC*YSIGSKRECRP
Trigger: GGGCCTACACTCCCTTTTGCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACATGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS CAA 90 bp GGCTTTTCAGATGGTGCCAATCCTGTGATGAGGCACTTGAAGAGTTaGAAGGTTAGGGCATGTAAAATATGGAGCTGGAAGGAAGCATGC +
Preference number: 6 (lower is better)
Translates to: GFSDGANPVMRHLKS*KVRACKIWSWKEAC
Trigger: GCATGCTTCCTTCCAGCTCCATATTTTACATGCCCTAACCTTCAAACTCTTCAAGTGCCTCATCACAGGATTGGCACCATCTGAAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS CCA 72 bp AGTCAGAGCTATGTTTTCCTCCTGTTCATGATGGCTTaGCTTTTCAGATGGTGCCAATCCTGTGATGAGGCA +
Preference number: 6 (lower is better)
Translates to: SQSYVFLLFMMA*LFRWCQSCDEA
Trigger: TGCCTCATCACAGGATTGGCACCATCTGAAAAGCCAAGCCATCATGAACAGGAGGAAAACATAGCTCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS TCA 72 bp CCAAAGAAGACCATCAGCCACATATCCAGCATGGCATaGAAGGGATCTGTCAAAGGACTGAACAAAAGTCCA +
Preference number: 6 (lower is better)
Translates to: PKKTISHISSMA*KGSVKGLNKSP
Trigger: TGGACTTTTGTTCAGTCCTTTGACAGATCCCTTTCATGCCATGCTGGATATGTGGCTGATGGTCTTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS TCA 72 bp TATCCAACAGTCAGAGCTATGTTTTCCTCCTGTTCATaGTGGCTTGGCTTTTCAGATGGTGCCAATCCTGTG +
Preference number: 6 (lower is better)
Translates to: YPTVRAMFSSCS*WLGFSDGANPV
Trigger: CACAGGATTGGCACCATCTGAAAAGCCAAGCCATCATGAACAGGAGGAAAACATAGCTCTGACTGTTGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS GCA 72 bp GTTAGGGCATGTAAAATATGGAGCTGGAAGGAAGCATaGTGCTATTCCATTGGAAGCAAAAGGGAGTGTAGG +
Preference number: 6 (lower is better)
Translates to: VRACKIWSWKEA*CYSIGSKRECR
Trigger: CCTACACTCCCTTTTGCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACATGCCCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS CAA 72 bp GATGGTGCCAATCCTGTGATGAGGCACTTGAAGAGTTaGAAGGTTAGGGCATGTAAAATATGGAGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: DGANPVMRHLKS*KVRACKIWSWK
Trigger: CTTCCAGCTCCATATTTTACATGCCCTAACCTTCAAACTCTTCAAGTGCCTCATCACAGGATTGGCACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS CCA 72 bp CACTTGAAGAGTTTGAAGGTTAGGGCATGTAAAATATaGAGCTGGAAGGAAGCATGCTGCTATTCCATTGGA +
Preference number: 6 (lower is better)
Translates to: HLKSLKVRACKI*SWKEACCYSIG
Trigger: TCCAATGGAATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACATGCCCTAACCTTCAAACTCTTCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS TCA 72 bp TATCCAGCATGGCATGAAAGGGATCTGTCAAAGGACTaGACAAAAGTCCATTTGTTCTTCTTGGGGCAATAT +
Preference number: 6 (lower is better)
Translates to: YPAWHERDLSKD*TKVHLFFLGQY
Trigger: ATATTGCCCCAAGAAGAACAAATGGACTTTTGTTCAGTCCTTTGACAGATCCCTTTCATGCCATGCTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS TCA 72 bp TTATTCTGGTTAGGTTCATACACCATTAGCCTGTTCTaGTATTGTGCCGTATTAGTTACTCCACCTGCCAGA +
Preference number: 6 (lower is better)
Translates to: LFWLGSYTISLF*YCAVLVTPPAR
Trigger: TCTGGCAGGTGGAGTAACTAATACGGCACAATATCAGAACAGGCTAATGGTGTATGAACCTAACCAGAATAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620278.1
CDS CCA 72 bp AAGAGTTTGAAGGTTAGGGCATGTAAAATATGGAGCTaGAAGGAAGCATGCTGCTATTCCATTGGAAGCAAA +
Preference number: 6 (lower is better)
Translates to: KSLKVRACKIWS*KEACCYSIGSK
Trigger: TTTGCTTCCAATGGAATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACATGCCCTAACCTTCAAACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS CAA 90 bp TTACATCCAGTACCTGGATACAAGCCAGAGGCTCATTTGTCCAAATaGAATATCCACCAACTAAATATATTCTCCCATTATGGACAGCAA +
Preference number: 6 (lower is better)
Translates to: LHPVPGYKPEAHLSK*NIHQLNIFSHYGQQ
Trigger: TTGCTGTCCATAATGGGAGAATATATTTAGTTGGTGGATATTCAATTTGGACAAATGAGCCTCTGGCTTGTATCCAGGTACTGGATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS TCA 72 bp TTATTCTGGTTAGGTTCATACACCATTAGCCTGTTCTaGTATTGTGCCGTATTAGTTACTCCACCTGATATC +
Preference number: 6 (lower is better)
Translates to: LFWLGSYTISLF*YCAVLVTPPDI
Trigger: GATATCAGGTGGAGTAACTAATACGGCACAATATCAGAACAGGCTAATGGTGTATGAACCTAACCAGAATAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
CDS CAA 72 bp GTACCTGGATACAAGCCAGAGGCTCATTTGTCCAAATaGAATATCCACCAACTAAATATATTCTCCCATTAT +
Preference number: 6 (lower is better)
Translates to: VPGYKPEAHLSK*NIHQLNIFSHY
Trigger: ATAATGGGAGAATATATTTAGTTGGTGGATATTCAATTTGGACAAATGAGCCTCTGGCTTGTATCCAGGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1
CDS CAA 72 bp TTACATCCAGTACCTGGATACAAGCCAGAGGCTCATTaGTCCAAATTGAATATCCACCAACTAAATATATTC +
Preference number: 6 (lower is better)
Translates to: LHPVPGYKPEAH*SKLNIHQLNIF
Trigger: GAATATATTTAGTTGGTGGATATTCAATTTGGACAAATGAGCCTCTGGCTTGTATCCAGGTACTGGATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369261.9
ENST00000536676.5
ENST00000539200.5
ENST00000544166.5
ENST00000620278.1