RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KLHDC7B (Homo sapiens)

Ensembl gene IDs: ENSG00000130487

Ensembl transcript IDs: ENST00000395676.4, ENST00000648057.3

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTaGGGAGGCCTTAGGACAGGCAGAAAGTCCCAGAGGCGAGGGCGT +
Preference number: 1 (lower is better)
Translates to: NPQCQTDPDSYGVGT*GGLRTGRKSQRRGR
Trigger: ACGCCCTCGCCTCTGGGACTTTCTGCCTGTCCTAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR GCA 90 bp GGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTaGGAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTG +
Preference number: 1 (lower is better)
Translates to: GEKTHHGLCCASWTP*EVLIAVILSPTTLL
Trigger: CAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR CCA 90 bp TTTCTAGCATGGGTTTCAAAGTGCGTAAGGGGAGAAAACGCATCATaGATTGTGCTGTGCATCCTGGACACCGTGCGAGGTGCTCATAGC +
Preference number: 1 (lower is better)
Translates to: FLAWVSKCVRGENAS*IVLCILDTVRGAHS
Trigger: GCTATGAGCACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCACTTTGAAACCCATGCTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR CCA 90 bp ACAGAAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTaGAGCACAGTCAGATGTATTCACTTTTCTAGCATGGGTTTCAAA +
Preference number: 1 (lower is better)
Translates to: TEKGPRQGHPGWRLE*STVRCIHFSSMGFK
Trigger: TTTGAAACCCATGCTAGAAAAGTGAATACATCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR GCA 90 bp CACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTGGTGTGGGCTGGGTATGGGCAGGAGCTaGAGACAGCAGGGCTGCACC +
Preference number: 2 (lower is better)
Translates to: HKAAEGGEPGVGLAWCGLGMGRS*RQQGCT
Trigger: GGTGCAGCCCTGCTGTCTGCAGCTCCTGCCCATACC...CAGCCCACACCAGGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR TCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGAGGCTGCAGAGGGTGGTaGGCCCGGAGTGGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRGCRGW*ARSGPG
Trigger: GCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCC...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGAGTGGTGAGCCCGGAGTaGGCCTGGCCTGGTGTGGGC +
Preference number: 2 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRVVSPE*AWPGVG
Trigger: GCCCACACCAGGCCAGGCCCACTCCGGGCTCACCAC...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CCA 90 bp GAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCCCAGGAGGGTCTCCCTaGAGAGCAGCGAAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: ESPRGEGVAWGRFCSLSCPGGSP*RAAKQL
Trigger: AAGCTGCTTCGCTGCTCTCCAGGGAGACCCTCCTGG...GCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR CAA 90 bp ACCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAAGTCCTaGTCTGTGGAGACGCATCAGTCCCTGGCTCTAGGGAATAGGGAG +
Preference number: 2 (lower is better)
Translates to: TPSSLGSAELQRAKS*SVETHQSLALGNRE
Trigger: CTCCCTATTCCCTAGAGCCAGGGACTGATGCGTCTCCACAGACAAGGACTTGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR GCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGAGGTATGGGCAGGAGCTaGAGACAGCAGGGCTGCACC +
Preference number: 2 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRGMGRS*RQQGCT
Trigger: GGTGCAGCCCTGCTGTCTGCAGCTCCTGCCCATACC...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CCA 90 bp AAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCATGGCGAGAAGTGGGGTaGGCTTCTGGAGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: KKGPDRDIQAGGWSGAQSWREVG*ASGGAG
Trigger: CCCAGCCCCTCCAGAAGCCCACCCCACTTCTCGCCA...TGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CCA 90 bp GAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGCGAGGTGCTCGGCTTCTGGAGGGGCTaGGAGAGCCCCACAAGGCTG +
Preference number: 2 (lower is better)
Translates to: EKTHHGLCCASWTPCEVLGFWRG*ESPTRL
Trigger: CAGCCTTGTGGGGCTCTCCCAGCCCCTCCAGAAGCC...GAGCACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CCA 90 bp GTGCGTAAGGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTTGGCGAGAAGTGGGGTaGGCTTCTGGAGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: VRKGRKRIMDCAVHPGHRWREVG*ASGGAG
Trigger: CCCAGCCCCTCCAGAAGCCCACCCCACTTCTCGCCA...ACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGATTAGAGATCGGGGGTTaGCGAGAAGTGGGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRLEIGG*REVGWA
Trigger: AGCCCACCCCACTTCTCGCCAACCCCCGATCTCTAA...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR CAA 90 bp CCCTTGAGAATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTaGGTACCTGGGGAGGCCTTAGGACAGGCAGAAAGTCCCAGAGGC +
Preference number: 2 (lower is better)
Translates to: PLRIHSAKQTQIATG*VPGEALGQAESPRG
Trigger: GCCTCTGGGACTTTCTGCCTGTCCTAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR CAA 90 bp GGGCTGCACCAGCGGACCAGTTTCAGAGGCAAGGGTTCTAGGCCCTaGAGAATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTTG +
Preference number: 2 (lower is better)
Translates to: GLHQRTSFRGKGSRP*RIHSAKQTQIATGL
Trigger: CAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAGGGCCTAGAACCCTTGCCTCTGAAACTGGTCCGCTGGTGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR GCA 90 bp GAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGCGAGGTGCTCCAGAGGCGAGGGCGTTaGCTGGGGACGTTTTTGCTC +
Preference number: 2 (lower is better)
Translates to: EKTHHGLCCASWTPCEVLQRRGR*LGTFLL
Trigger: GAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTG...GAGCACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR TCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGAAGGGTTCTAGGCCCTTaGGAATCCACAGTGCCAAAC +
Preference number: 2 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRRVLGP*ESTVPN
Trigger: GTTTGGCACTGTGGATTCTCAAGGGCCTAGAACCCT...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CCA 90 bp TTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCGTGGTGAGCCCGGAGTaGGCCTGGCCTGGTGTGGGC +
Preference number: 2 (lower is better)
Translates to: LGDRRPLSTFYRQGEREVVVSPE*AWPGVG
Trigger: GCCCACACCAGGCCAGGCCCACTCCGGGCTCACCAC...GACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR CAA 90 bp ACAGGCAGAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTaGCTCCCTGTCCTGCTGACAGAGCATAGGAAGTGTGAATGTTTT +
Preference number: 2 (lower is better)
Translates to: TGRKSQRRGRCLGTF*LPVLLTEHRKCECF
Trigger: AAAACATTCACACTTCCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTCTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR GCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGAGCATGGGTTTCAAAGTaGGTAAGGGGAGAAAACGCA +
Preference number: 2 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRAWVSK*VRGENA
Trigger: TGCGTTTTCTCCCCTTACGCACTTTGAAACCCATGC...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CCA 90 bp AAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTCCGATCCCAGCCCAGGAGGGTCTCCCTaGAGAGCAGCGAAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: KAEGESCPETRAGSSDPSPGGSP*RAAKQL
Trigger: AAGCTGCTTCGCTGCTCTCCAGGGAGACCCTCCTGG...GCTGGGATCGGAACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CCA 90 bp CTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGGGGTTGGCGAGAAGTaGGGTGGGCTTCTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: LLGDRRPLSTFYRQGEREGVGEK*GGLLEG
Trigger: CCCCTCCAGAAGCCCACCCCACTTCTCGCCAACCCC...TTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGAGGAGAAAACGCATCATaGATTGTGCTGTGCATCCTG +
Preference number: 2 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRGENAS*IVLCIL
Trigger: CAGGATGCACAGCACAATCCATGATGCGTTTTCTCC...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR GCA 90 bp GAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGCGAGGTGCTCCTTGAGAATCCACAGTaGCAAACAGACCCAGATAGC +
Preference number: 2 (lower is better)
Translates to: EKTHHGLCCASWTPCEVLLENPQ*QTDPDS
Trigger: GCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG...GAGCACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CCA 90 bp CAGAAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTTCACTTTTCTAGCATaGGTTTCAAAGTGCGTAAGG +
Preference number: 2 (lower is better)
Translates to: QKKGPDRDIQAGGWSGAQFTFLA*VSKCVR
Trigger: CCTTACGCACTTTGAAACCCATGCTAGAAAAGTGAA...CTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR GCA 90 bp ACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCTGCAGACAGCAGGGCTaGACCAGCGGACCAGTTTCA +
Preference number: 2 (lower is better)
Translates to: TDVHCPHFIDKEKGKSNVCRQQG*TSGPVS
Trigger: TGAAACTGGTCCGCTGGTGCAGCCCTGCTGTCTGCA...GACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CCA 90 bp ACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCTTAGAGATCGGGGGTTaGCGAGAAGTGGGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: TDVHCPHFIDKEKGKSNVLEIGG*REVGWA
Trigger: AGCCCACCCCACTTCTCGCCAACCCCCGATCTCTAA...GACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CAA 90 bp CACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTGGTGTGGGCTGAGCAGAAGGGGAAAGTaGTCCAGAAACAAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: HKAAEGGEPGVGLAWCGLSRRGK*SRNKSR
Trigger: CCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCT...CAGCCCACACCAGGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR GCA 72 bp GCTGGGGGTATGGGCAGGAGCTGCAGACAGCAGGGCTaGACCAGCGGACCAGTTTCAGAGGCAAGGGTTCTA +
Preference number: 3 (lower is better)
Translates to: AGGMGRSCRQQG*TSGPVSEARVL
Trigger: TAGAACCCTTGCCTCTGAAACTGGTCCGCTGGTGCAGCCCTGCTGTCTGCAGCTCCTGCCCATACCCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CAA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGACCAGAGGCGAGGGCGTaGCCTGGGGACGTTTTTGCT +
Preference number: 3 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRPEARA*PGDVFA
Trigger: AGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGG...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CAA 90 bp AAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCACCAGAGGCGAGGGCGTaGCCTGGGGACGTTTTTGCT +
Preference number: 3 (lower is better)
Translates to: KKGPDRDIQAGGWSGAQSPEARA*PGDVFA
Trigger: AGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGG...TGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CAA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGATTTAGAGATCGGGGGTaGGCGAGAAGTGGGGTGGGC +
Preference number: 3 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRFRDRG*ARSGVG
Trigger: GCCCACCCCACTTCTCGCCAACCCCCGATCTCTAAA...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR GCA 72 bp CTTAGGACAGGCAGAAAGTCCCAGAGGCGAGGGCGTTaGCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACA +
Preference number: 3 (lower is better)
Translates to: LRTGRKSQRRGR*LGTFLLPVLLT
Trigger: TGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTCTGCCTGTCCTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CAA 90 bp CAGAAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTGCCTGGGGACGTTTTaGCTCCCTGTCCTGCTGACA +
Preference number: 3 (lower is better)
Translates to: QKKGPDRDIQAGGWSGAQCLGTF*LPVLLT
Trigger: TGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCA...CTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CAA 90 bp GAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGCGAGGTGCTCTTTAGAGATCGGGGGTaGGCGAGAAGTGGGGTGGGC +
Preference number: 3 (lower is better)
Translates to: EKTHHGLCCASWTPCEVLFRDRG*ARSGVG
Trigger: GCCCACCCCACTTCTCGCCAACCCCCGATCTCTAAA...GAGCACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR CCA 72 bp TGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTaGGGAGGCCTTAGGACAGGCAGAAAGTCCCAGAGG +
Preference number: 3 (lower is better)
Translates to: CQTDPDSYGVGT*GGLRTGRKSQR
Trigger: CCTCTGGGACTTTCTGCCTGTCCTAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CAA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGAAGCAGAAGGGGAAAGTaGTCCAGAAACAAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRSRRGK*SRNKSR
Trigger: CCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCT...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR CCA 72 bp GGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTaGACACCGTGCGAGGTGCTCATAGCTGTGATCTTG +
Preference number: 3 (lower is better)
Translates to: GEKTHHGLCCAS*TPCEVLIAVIL
Trigger: CAAGATCACAGCTATGAGCACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR CCA 72 bp GGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTaGAGCACAGTCAGATGTATTCACTTTTCTAGCATG +
Preference number: 3 (lower is better)
Translates to: GPRQGHPGWRLE*STVRCIHFSSM
Trigger: CATGCTAGAAAAGTGAATACATCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CAA 90 bp AAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAAAAACGCATCATGGATaGTGCTGTGCATCCTGGACA +
Preference number: 3 (lower is better)
Translates to: KKGPDRDIQAGGWSGAQSKTHHG*CCASWT
Trigger: TGTCCAGGATGCACAGCACAATCCATGATGCGTTTT...TGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR CCA 72 bp TGGGTTTCAAAGTGCGTAAGGGGAGAAAACGCATCATaGATTGTGCTGTGCATCCTGGACACCGTGCGAGGT +
Preference number: 3 (lower is better)
Translates to: WVSKCVRGENAS*IVLCILDTVRG
Trigger: ACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCACTTTGAAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CAA 90 bp TCTCCCACAACTCTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAACAGCGAGCCAAGTCCTaGTCTGTGGAGACGCATCAG +
Preference number: 3 (lower is better)
Translates to: SPTTLLGDRRPLSTFYRQQRAKS*SVETHQ
Trigger: CTGATGCGTCTCCACAGACAAGGACTTGGCTCGCTG...TTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAGAGTTGTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CAA 90 bp TGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCATGCCTGGGGACGTTTTaGCTCCCTGTCCTGCTGACA +
Preference number: 3 (lower is better)
Translates to: WVTDVHCPHFIDKEKGKSCLGTF*LPVLLT
Trigger: TGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCA...TGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR CCA 72 bp AAAACAGAAAAAGGGCCCAGACAGGGACATCCAGGCTaGAGGTTGGAGTGGAGCACAGTCAGATGTATTCAC +
Preference number: 3 (lower is better)
Translates to: KTEKGPRQGHPG*RLEWSTVRCIH
Trigger: GTGAATACATCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTTCTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR CCA 72 bp AAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTaGAGTGGAGCACAGTCAGATGTATTCACTTTTCTA +
Preference number: 3 (lower is better)
Translates to: KKGPDRDIQAGG*SGAQSDVFTFL
Trigger: TAGAAAAGTGAATACATCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CAA 90 bp CTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAAAGGGTTCTAGGCCCTaGAGAATCCACAGTGCCAAA +
Preference number: 3 (lower is better)
Translates to: LLGDRRPLSTFYRQGEREKGSRP*RIHSAK
Trigger: TTTGGCACTGTGGATTCTCAAGGGCCTAGAACCCTT...TTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR-3UTR CAA 90 bp TGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAAGGGTTCTAGGCCCTaGAGAATCCACAGTGCCAAA +
Preference number: 3 (lower is better)
Translates to: WVTDVHCPHFIDKEKGKSKGSRP*RIHSAK
Trigger: TTTGGCACTGTGGATTCTCAAGGGCCTAGAACCCTT...TGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCGCAGGGAGGCAGCCCTaGTCCAGGAGCCGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLAAGRQP*SRSRSL
Trigger: CAGTGACCGGCTCCTGGAGCAGGGCTGCCTCCCTGC...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTGGTGTGGGCTGGGGAGTGCGGGCTCCTaGGCGAGTGGGGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: HKAAEGGEPGVGLAWCGLGSAGS*ASGGPV
Trigger: CACAGGACCCCCACTCGCCCAGGAGCCCGCACTCCC...CAGCCCACACCAGGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCAGTCAGGGCTTCAGGTaGGAACCCCGGGCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLASQGFR*EPRAGS
Trigger: GCTCCCGGCCCGGGGTTCCCACCTGAAGCCCTGACT...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR GCA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTTCCGGGCCTCCTCCTaGTTTTCCGTGAGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLAFRASS*FSVSAP
Trigger: CGGGGCGCTCACGGAAAAGCAGGAGGAGGCCCGGAA...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTGGTGTGGGCTGAGGCCGGGCTCTCCGTaGTGCTGGGCAAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HKAAEGGEPGVGLAWCGLRPGSP*CWAKAS
Trigger: GCTGGCCTTTGCCCAGCAGCACGGAGAGCCCGGCCT...CAGCCCACACCAGGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCGGCTCTCCGTGCTGCTaGGCAAAGGCCAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLAGSPCC*AKASTS
Trigger: GGACGTGCTGGCCTTTGCCCAGCAGCACGGAGAGCC...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTGGCGAGAAGTGGGGTaGGCTTCTGGAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLAWREVG*ASGGAG
Trigger: CCCAGCCCCTCCAGAAGCCCACCCCACTTCTCGCCA...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTGGTGTGGGCTGCACCGGAGCCACGGATaGCCCCCGCCAGAAACAGGT +
Preference number: 4 (lower is better)
Translates to: HKAAEGGEPGVGLAWCGLHRSHG*PPPETG
Trigger: ACCTGTTTCTGGCGGGGGGCATCCGTGGCTCCGGTG...CAGCCCACACCAGGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAAGTCCTTGTCTGTGGGGGCCACAGGGAAGGTaGCTGCGGGGAGTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: PPPLSAQQSSSEPSPCLWGPQGR*LRGVAR
Trigger: GCGCGCCACTCCCCGCAGGCACCTTCCCTGTGGCCC...CCACAGACAAGGACTTGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCGGTATGGGCAGGAGCTaGAGACAGCAGGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLAGMGRS*RQQGCT
Trigger: GGTGCAGCCCTGCTGTCTGCAGCTCCTGCCCATACC...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTCGCTGGAACGCCGGTaGCTGGCACTGTATGGGCAC +
Preference number: 4 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLASLERR*LALYGH
Trigger: GTGCCCATACAGTGCCAGCCACCGGCGTTCCAGCGA...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTGGTGTGGGCTGTGGTGTTGCCCAGGGTaGTGCAGTGCAGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: HKAAEGGEPGVGLAWCGLWCCPG*CSAVGR
Trigger: CCGCCCCACTGCACTGCACCACCCTGGGCAACACCA...CAGCCCACACCAGGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp GAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCAGGCTGCAGAGGGTGGTaGGCCCGGAGTGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: EARALPGDVFAPCPADRAGCRGW*ARSGPG
Trigger: GCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCC...TGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp GAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCGGCTGCAGAGGGTGGTaGGCCCGGAGTGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: ESPRGEGVAWGRFCSLSCGCRGW*ARSGPG
Trigger: GCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCC...GCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp GAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCAGGGCCACAGGGAAGGTaGCTGCGGGGAGTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: EARALPGDVFAPCPADRAGPQGR*LRGVAR
Trigger: GCGCGCCACTCCCCGCAGGCACCTTCCCTGTGGCCC...TGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTGGTGTGGGCTGACTCAGAGTGAGGTCTaGAGCCGGTCCTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: HKAAEGGEPGVGLAWCGLTQSEV*SRSSGG
Trigger: GCCCCCTGAGGACCGGCTGCAGACCTCACTCTGAGT...CAGCCCACACCAGGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp GAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCAGCAGCCGGCTTTGCTTaGTCCGGGGGCCGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: EARALPGDVFAPCPADRAAAGFA*SGGRVG
Trigger: GCCCACCCGGCCCCCGGAGCAAGCAAAGCCGGCTGC...TGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCAGCAGAAGACCTCGTTaGAGCAGACGGCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLASRRPR*SRRPWH
Trigger: GTGCCAAGGCCGTCTGCTCCAACGAGGTCTTCTGCT...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATAGGGAGGGCGCGCGGCTGTaGCCGGCTGCAGCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: RGRCLGTFLLPVLLTEHREGARL*PAAAGF
Trigger: AAAGCCGGCTGCAGCCGGCCACAGCCGCGCGCCCTC...CCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR TCA 90 bp GAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCCTGGGGTACCGGCTGTaGGCGCCTCGCAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ESPRGEGVAWGRFCSLSCLGYRL*APRRGG
Trigger: TCCTCCTCTGCGAGGCGCTCACAGCCGGTACCCCAG...GCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp AAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGAGGCCTTAGGACAGGCACCGAGGCGGCCGGCCTaGCCTCCTGCTCCGAGCTCG +
Preference number: 4 (lower is better)
Translates to: KQTQIATGLVPGEALGQAPRRPA*PPAPSS
Trigger: CGAGCTCGGAGCAGGAGGTCAGGCCGGCCGCCTCGG...TGCCTGTCCTAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTTGAACACATGCAGGTaGGCAGGTAGAGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLALNTCR*AGRGRD
Trigger: GTCCCTGCCTCTACCTGCGCACCTGCATGTGTTCAA...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCGGTCGTAGCACTCCATaGTGTACAGGCATTCGCCAC +
Preference number: 4 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLAGRSTP*CTGIRH
Trigger: GTGGCGAATGCCTGTACAGCATGGAGTGCTACGACC...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTCAGTAGGGCCTGGCTaGAGATATCAGGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLASVGPG*RYQETA
Trigger: CGCTGTCTCCTGATATCTGCAGCCAGGCCCTACTGA...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR GCA 90 bp CAGAAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGGCAGGGACAGGGCTCTaGTGGCCGCGTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QKKGPDRDIQAGGWSGAQAGTGL*WPRPGG
Trigger: GCCCCCAGGACGCGGCCAGCAGAGCCCTGTCCCTGC...CTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR TCA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCAGGGTTCTAGGCCCTTaGGAATCCACAGTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLARVLGP*ESTVPN
Trigger: GTTTGGCACTGTGGATTCTCAAGGGCCTAGAACCCT...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp GCAGAGCTCCAGCGAGCCAAGTCCTTGTCTGTGGAGACGCATCAGTCCCTGGCTTGGGCTCGGGCCTGCTaGATGGGCCGAACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AELQRAKSLSVETHQSLAWARAC*MGRTWL
Trigger: GAGCCAGGTTCGGCCCATGCAGCAGGCCCGAGCCCA...AGCCAGGGACTGATGCGTCTCCACAGACAAGGACTTGGCTCGCTGGAGCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp GCAGAGCTCCAGCGAGCCAAGTCCTTGTCTGTGGAGACGCATCAGTCCCTGGCTGCAGGGAGGCAGCCCTaGTCCAGGAGCCGGTCACTG +
Preference number: 4 (lower is better)
Translates to: AELQRAKSLSVETHQSLAAGRQP*SRSRSL
Trigger: CAGTGACCGGCTCCTGGAGCAGGGCTGCCTCCCTGC...AGCCAGGGACTGATGCGTCTCCACAGACAAGGACTTGGCTCGCTGGAGCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAAGTCCTTGTCTGTGGGCCTGCCCCAAGGGCTaGCCAGTTAAGGTGGACCAG +
Preference number: 4 (lower is better)
Translates to: PPPLSAQQSSSEPSPCLWACPKG*PVKVDQ
Trigger: CTGGTCCACCTTAACTGGGCAGCCCTTGGGGCAGGC...CCACAGACAAGGACTTGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCAGCCACCAGCTTGAGCTaGGCTCGGGCCTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: EARALPGDVFAPCPADRAATSLS*ARACCM
Trigger: CATGCAGCAGGCCCGAGCCCAGCTCAAGCTGGTGGC...TGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATAGGGAGCCCCGAGGGCTGTaGACACCGGTTCTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RGRCLGTFLLPVLLTEHREPRGL*TPVLPP
Trigger: AGGCGGCAGAACCGGTGTCCACAGCCCTCGGGGCTC...CCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp TGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGAGGCCTTAGGACAGGGCTCCTGGGCGAGTaGGGGTCCTGTGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: CQTDPDSYGVGTWGGLRTGLLGE*GSCGEA
Trigger: GGCCTCCCCACAGGACCCCCACTCGCCCAGGAGCCC...TGTCCTAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp GCAGAGCTCCAGCGAGCCAAGTCCTTGTCTGTGGAGACGCATCAGTCCCTGGCTGTGGCACCCGGCCCTTaGGACGAGAGTGGGCGACCT +
Preference number: 4 (lower is better)
Translates to: AELQRAKSLSVETHQSLAVAPGP*DESGRP
Trigger: AGGTCGCCCACTCTCGTCCCAAGGGCCGGGTGCCAC...AGCCAGGGACTGATGCGTCTCCACAGACAAGGACTTGGCTCGCTGGAGCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR TCA 90 bp GAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCACTCTCCTGAGGCTTTaGCCCGTCAGCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ESPRGEGVAWGRFCSLSCTLLRL*PVSWGR
Trigger: CCTGCCCCAGCTGACGGGTCAAAGCCTCAGGAGAGT...GCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp TGTGAATGTTTTCTACCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAGCACGTCCAGGCAACTaGCCAGGTCCAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: CECFLPPPLSAQQSSSEPARPGN*PGPAAA
Trigger: GGCGGCGGCTGGACCTGGGCAGTTGCCTGGACGTGC...TGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGGTAGAAAACATTCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGAGCGGCTGTGGCCGGCTaGAGCCGGCTTTGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRAAVAG*SRLCLL
Trigger: GAGCAAGCAAAGCCGGCTGCAGCCGGCCACAGCCGC...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp GAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCCTGGGCATCGCGGCTTaGGGCAGCGGGTCTAGACTT +
Preference number: 4 (lower is better)
Translates to: ESPRGEGVAWGRFCSLSCLGIAA*GSGSRL
Trigger: AAGTCTAGACCCGCTGCCCCAAGCCGCGATGCCCAG...GCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCACTGCGTTTCCGTAGCTaGGGTACCGGCTGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: EARALPGDVFAPCPADRALRFRS*GTGCER
Trigger: GCGCTCACAGCCGGTACCCCAGCTACGGAAACGCAG...TGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GCAGAGCTCCAGCGAGCCAAGTCCTTGTCTGTGGAGACGCATCAGTCCCTGGCTCCCCCTGGTAGAGGCTaGGCAGTACGAGGACGCCCA +
Preference number: 4 (lower is better)
Translates to: AELQRAKSLSVETHQSLAPPGRG*AVRGRP
Trigger: TGGGCGTCCTCGTACTGCCCAGCCTCTACCAGGGGG...AGCCAGGGACTGATGCGTCTCCACAGACAAGGACTTGGCTCGCTGGAGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp TGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGAGGCCTTAGGACAGGGGAGTGGCGCGCGTaGGGTCCAGGCGTCTGTTCG +
Preference number: 4 (lower is better)
Translates to: CQTDPDSYGVGTWGGLRTGEWRA*GPGVCS
Trigger: CGAACAGACGCCTGGACCCCACGCGCGCCACTCCCC...TGTCCTAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GCAGAGCTCCAGCGAGCCAAGTCCTTGTCTGTGGAGACGCATCAGTCCCTGGCTCAGGCCACAGCCTCGTaGGCCACAGGGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: AELQRAKSLSVETHQSLAQATAS*ATGKVP
Trigger: AGGCACCTTCCCTGTGGCCCACGAGGCTGTGGCCTG...AGCCAGGGACTGATGCGTCTCCACAGACAAGGACTTGGCTCGCTGGAGCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCGGCGAGGGCGTTGCCTaGGGACGTTTTTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ESPRGEGVAWGRFCSLSCGEGVA*GRFCSL
Trigger: CAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCC...GCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGACATCGTAGGCCCCTGTaGCACCCGGCCCTTGGGACG +
Preference number: 4 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRHRRPL*HPALGT
Trigger: CGTCCCAAGGGCCGGGTGCCACAGGGGCCTACGATG...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp CAGAAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGGGCAGGGGATGCGGCTaGGGTTGGGGCTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QKKGPDRDIQAGGWSGAQGRGCG*GWGWSW
Trigger: CCAACTCCAGCCCCAACCCCAGCCGCATCCCCTGCC...CTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR TCA 90 bp ATCCTGGACACCGTGCGAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCCTCCTGCTTTTCCGTaGGCGCCCCGCTGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: ILDTVRGAHSCDLVSHNSPPAFP*APRCGR
Trigger: CCGGCCGCAGCGGGGCGCTCACGGAAAAGCAGGAGG...AGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTCGCACGGTGTCCAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp GAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTCACGGGGCTGTACCTaGGCAGGCGGTAGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: ESPRGEGVAWGRFCSLSCSRGCT*AGGRRG
Trigger: ACCTCTTCTACCGCCTGCTCAGGTACAGCCCCGTGA...GCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp CAGAAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGGCCTGCCACTCAGAGTaGGGTCTGCAGCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QKKGPDRDIQAGGWSGAQACHSE*GLQPVL
Trigger: GAGGACCGGCTGCAGACCTCACTCTGAGTGGCAGGC...CTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp TGTGAATGTTTTCTACCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCATGGGCTCGGGCCTGCTaGATGGGCCGAACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CECFLPPPLSAQQSSSEPWARAC*MGRTWL
Trigger: GAGCCAGGTTCGGCCCATGCAGCAGGCCCGAGCCCA...TGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGGTAGAAAACATTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAAGTCCTTGTCTGTGGGCATCCTGGACACCGTaGGAGGTGCTCATAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PPPLSAQQSSSEPSPCLWASWTP*EVLIAV
Trigger: CACAGCTATGAGCACCTCGCACGGTGTCCAGGATGC...CCACAGACAAGGACTTGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp TGTGAATGTTTTCTACCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAGGGGAGGGTCTGGGCTaGGCGATCCGTTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: CECFLPPPLSAQQSSSEPGEGLG*AIRWSR
Trigger: CCGAGACCAACGGATCGCCCAGCCCAGACCCTCCCC...TGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGGTAGAAAACATTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp TGTGAATGTTTTCTACCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAGCCTGGGGGAGGGTCTaGGCTGGGCGATCCGTTGGT +
Preference number: 4 (lower is better)
Translates to: CECFLPPPLSAQQSSSEPAWGRV*AGRSVG
Trigger: ACCAACGGATCGCCCAGCCCAGACCCTCCCCCAGGC...TGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGGTAGAAAACATTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CAGAAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGGGCTCTCCGTGCTGCTaGGCAAAGGCCAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: QKKGPDRDIQAGGWSGAQGSPCC*AKASTS
Trigger: GGACGTGCTGGCCTTTGCCCAGCAGCACGGAGAGCC...CTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCGCTGCCCAGTTAAGGTaGACCAGTCCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ESPRGEGVAWGRFCSLSCAAQLR*TSPPGP
Trigger: AGGCCCTGGAGGACTGGTCCACCTTAACTGGGCAGC...GCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp TGTGAATGTTTTCTACCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCACTAGCCAGGGGCGCGTaGAGTCTGGGGCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: CECFLPPPLSAQQSSSEPLARGA*SLGLGQ
Trigger: TTGGCCCAGCCCCAGACTCCACGCGCCCCTGGCTAG...TGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGGTAGAAAACATTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR TCA 90 bp GAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTCTGCAGAAACACCATaGGCTTCCGGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ESPRGEGVAWGRFCSLSCSAETP*ASGPPP
Trigger: AGGAGGAGGCCCGGAAGCTCATGGTGTTTCTGCAGA...GCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp AAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTCCGATCCCAGCGGCCGGTCCGCAGGCTaGGGATGCGCTCGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: KAEGESCPETRAGSSDPSGRSAG*GCARGR
Trigger: CCGACCGCGAGCGCATCCTCAGCCTGCGGACCGGCC...GCTGGGATCGGAACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp TGTGAATGTTTTCTACCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAAGAGGTGACCCCCGGTaGCGTAGATGTCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: CECFLPPPLSAQQSSSEPRGDPR*RRCPHG
Trigger: GCCGTGGGGACATCTACGTCACCGGGGGTCACCTCT...TGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGGTAGAAAACATTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp GAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCCTCAGGCAGCGTTCCTaGGCTCTGTGCTGTCATCAC +
Preference number: 4 (lower is better)
Translates to: ESPRGEGVAWGRFCSLSCLRQRS*ALCCHH
Trigger: GTGATGACAGCACAGAGCTCAGGAACGCTGCCTGAG...GCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR GCA 90 bp GCAGAGCTCCAGCGAGCCAAGTCCTTGTCTGTGGAGACGCATCAGTCCCTGGCTGGGCGATTTCGCACCTaGTGCGTTTCCGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AELQRAKSLSVETHQSLAGRFRT*CVSVAG
Trigger: CCCAGCTACGGAAACGCAGCAGGTGCGAAATCGCCC...AGCCAGGGACTGATGCGTCTCCACAGACAAGGACTTGGCTCGCTGGAGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp GAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCACAACCCCCGGGCCTCTaGAGAAACACCATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: EARALPGDVFAPCPADRAQPPGL*RNTMSF
Trigger: GAAGCTCATGGTGTTTCTGCAGAGGCCCGGGGGTTG...TGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp TGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATAGGAAGTGTGAAGCACGTCCAGGCAACTaGCCAGGTCCAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: CLGTFLLPVLLTEHRKCEARPGN*PGPAAA
Trigger: GGCGGCGGCTGGACCTGGGCAGTTGCCTGGACGTGC...TTCACACTTCCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAAGTCCTTGTCTGTGGTTGAACACATGCAGGTaGGCAGGTAGAGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PPPLSAQQSSSEPSPCLWLNTCR*AGRGRD
Trigger: GTCCCTGCCTCTACCTGCGCACCTGCATGTGTTCAA...CCACAGACAAGGACTTGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AGGCAGAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTGGCTGGGCGATCCGTTaGTCTCGGAGCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RQKVPEARALPGDVFAPCGWAIR*SRSFLA
Trigger: AGCCAAGAAGCTCCGAGACCAACGGATCGCCCAGCC...ACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGCGAGGTGCTCGCCTGGGGGAGGGTCTaGGCTGGGCGATCCGTTGGT +
Preference number: 4 (lower is better)
Translates to: EKTHHGLCCASWTPCEVLAWGRV*AGRSVG
Trigger: ACCAACGGATCGCCCAGCCCAGACCCTCCCCCAGGC...GAGCACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp ATCCTGGACACCGTGCGAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTGGGGAGTGGCGCGCGTaGGGTCCAGGCGTCTGTTCG +
Preference number: 4 (lower is better)
Translates to: ILDTVRGAHSCDLVSHNSGEWRA*GPGVCS
Trigger: CGAACAGACGCCTGGACCCCACGCGCGCCACTCCCC...AGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTCGCACGGTGTCCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGAGGCCTTAGGACAGGCATGGTGTTGCCCAGGGTaGTGCAGTGCAGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: KQTQIATGLVPGEALGQAWCCPG*CSAVGR
Trigger: CCGCCCCACTGCACTGCACCACCCTGGGCAACACCA...TGCCTGTCCTAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CAGAAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGAGGGCTGCAGCTCCTTaGCCTGGAACTGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QKKGPDRDIQAGGWSGAQRAAAP*PGTGQS
Trigger: GGACTGCCCAGTTCCAGGCCAAGGAGCTGCAGCCCT...CTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp TGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGAGGCCTTAGGACATGGCGAGAAGTGGGGTaGGCTTCTGGAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CQTDPDSYGVGTWGGLRTWREVG*ASGGAG
Trigger: CCCAGCCCCTCCAGAAGCCCACCCCACTTCTCGCCA...TGTCCTAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp TGTGAATGTTTTCTACCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAGGGGTTGGCGAGAAGTaGGGTGGGCTTCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CECFLPPPLSAQQSSSEPGVGEK*GGLLEG
Trigger: CCCCTCCAGAAGCCCACCCCACTTCTCGCCAACCCC...TGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGGTAGAAAACATTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGAGGCCTTAGGACAGGCAGGGGTTGGCGAGAAGTaGGGTGGGCTTCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: KQTQIATGLVPGEALGQAGVGEK*GGLLEG
Trigger: CCCCTCCAGAAGCCCACCCCACTTCTCGCCAACCCC...TGCCTGTCCTAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCACAGGGACATCCAGGCTaGAGGTTGGAGTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: EARALPGDVFAPCPADRAQGHPG*RLEWST
Trigger: TGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTG...TGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTGCGGGGCCTGCGGCCTaGCGAGAGGACGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRAGPAA*REDALT
Trigger: TGTCAGGGCGTCCTCTCGCCAGGCCGCAGGCCCCGC...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp GTGCGTAAGGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGGGGCGCGTGGAGTCTaGGGCTGGGCCAAAGCTCCG +
Preference number: 4 (lower is better)
Translates to: VRKGRKRIMDCAVHPGHRGARGV*GWAKAP
Trigger: CGGAGCTTTGGCCCAGCCCCAGACTCCACGCGCCCC...ACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648057.3
3UTR CAA 72 bp TCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAAGTCCTaGTCTGTGGAGACGCATCAGTCCCTGGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: SLGSAELQRAKS*SVETHQSLALG
Trigger: CCCTAGAGCCAGGGACTGATGCGTCTCCACAGACAAGGACTTGGCTCGCTGGAGCTCTGCTGAGCCGAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp CGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATAGGAGAGCCACACTCTCCTaGGGCTTTGACCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: RGRCLGTFLLPVLLTEHRRATLS*GFDPSA
Trigger: AGCTGACGGGTCAAAGCCTCAGGAGAGTGTGGCTCT...CCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp AGCAAGCTGAGAGGGTCTGTAAGTAGGTACGGAATTGAGTCAGGAAACAGTCTGCCGAGGCGGCCGGCCTaGCCTCCTGCTCCGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SKLRGSVSRYGIESGNSLPRRPA*PPAPSS
Trigger: CGAGCTCGGAGCAGGAGGTCAGGCCGGCCGCCTCGG...CAGACTGTTTCCTGACTCAATTCCGTACCTACTTACAGACCCTCTCAGCTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp CAGAAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTGTTCTCCCGGGGGTTaGACACATGCAGGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: QKKGPDRDIQAGGWSGAQCSPGG*THAGAQ
Trigger: CTGCGCACCTGCATGTGTTCAACCCCCGGGAGAACA...CTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGATCACGGGGCTGTACCTaGGCAGGCGGTAGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRSRGCT*AGGRRG
Trigger: ACCTCTTCTACCGCCTGCTCAGGTACAGCCCCGTGA...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp TGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGAGGCCTTAGGACAGAGAGTGGGCGACCTTaGGGCGGACTCTCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: CQTDPDSYGVGTWGGLRTESGRP*GGLSSQ
Trigger: CTGGCTAGAGAGTCCGCCTCAAGGTCGCCCACTCTC...TGTCCTAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR GCA 90 bp AGGCAGAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCAACCCCCGGGCCTCTaGAGAAACACCATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RQKVPEARALPGDVFAPCQPPGL*RNTMSF
Trigger: GAAGCTCATGGTGTTTCTGCAGAGGCCCGGGGGTTG...ACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp TGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATAGGAAGTGTGAACCGGGCTCTCCGTGCTaGTGGGCAAAGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: CLGTFLLPVLLTEHRKCEPGSPC*WAKAST
Trigger: CGTGCTGGCCTTTGCCCAGCAGCACGGAGAGCCCGG...TTCACACTTCCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CAGAAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGCAGAGGCGAGGGCGTTaGCTGGGGACGTTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: QKKGPDRDIQAGGWSGAQQRRGR*LGTFLL
Trigger: GAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTG...CTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTGGCTGCAGCCGGCTTTaGTTGCTCCGGGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRGCSRL*LLRGPG
Trigger: ACCCGGCCCCCGGAGCAAGCAAAGCCGGCTGCAGCC...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp AAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCACCTCCTGGTAGCGCCTaGGGAGAGCCACACTCTCCT +
Preference number: 4 (lower is better)
Translates to: KKGPDRDIQAGGWSGAQSPPGSA*GEPHSP
Trigger: AGGAGAGTGTGGCTCTCCCCAGGCGCTACCAGGAGG...TGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATGCCTGGGGAAGGGGTaGCTTCTAAGAACCATGGCA +
Preference number: 4 (lower is better)
Translates to: EARALPGDVFAPCPADRACLGKG*LLRTMA
Trigger: TGCCATGGTTCTTAGAAGCCACCCCTTCCCCAGGCA...TGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GTGCGTAAGGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGGGGAGGGTCTGGGCTaGGCGATCCGTTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: VRKGRKRIMDCAVHPGHRGEGLG*AIRWSR
Trigger: CCGAGACCAACGGATCGCCCAGCCCAGACCCTCCCC...ACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCACTGGGCATCGCGGCTTaGGGCAGCGGGTCTAGACTT +
Preference number: 4 (lower is better)
Translates to: KKGPDRDIQAGGWSGAQSLGIAA*GSGSRL
Trigger: AAGTCTAGACCCGCTGCCCCAAGCCGCGATGCCCAG...TGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGCGAGGTGCTCCCCCCTGGTAGAGGCTaGGCAGTACGAGGACGCCCA +
Preference number: 4 (lower is better)
Translates to: EKTHHGLCCASWTPCEVLPPGRG*AVRGRP
Trigger: TGGGCGTCCTCGTACTGCCCAGCCTCTACCAGGGGG...GAGCACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGATGGAACGCCGGTGGCTaGCACTGTATGGGCACTCGT +
Preference number: 4 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRWNAGG*HCMGTR
Trigger: ACGAGTGCCCATACAGTGCCAGCCACCGGCGTTCCA...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CAGAAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGCCAGGAGGGTCTCCCTaGAGAGCAGCGAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: QKKGPDRDIQAGGWSGAQPGGSP*RAAKQL
Trigger: AAGCTGCTTCGCTGCTCTCCAGGGAGACCCTCCTGG...CTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTGGGCCTGGCCTGGTGTaGGCTGGGGGTATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRGPGLV*AGGMGR
Trigger: CCTGCCCATACCCCCAGCCCACACCAGGCCAGGCCC...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATAGGAGACAGCGAGGCTTATaGCAGGATAGGAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RGRCLGTFLLPVLLTEHRRQRGL*QDRSPG
Trigger: CCCTGGGCTCCTATCCTGCCATAAGCCTCGCTGTCT...CCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGATCCAGGGCCTGGGAATaGTGGGGTCTCTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRSRAWE*WGLCLH
Trigger: GTGCAAGCAGAGACCCCACCATTCCCAGGCCCTGGA...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR TCA 90 bp ATCCTGGACACCGTGCGAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTGGGCTGGCGCCGCTCTaGGATTTTCGCCCACGGAAG +
Preference number: 4 (lower is better)
Translates to: ILDTVRGAHSCDLVSHNSGLAPL*DFRPRK
Trigger: CTTCCGTGGGCGAAAATCTCAGAGCGGCGCCAGCCC...AGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTCGCACGGTGTCCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR TCA 90 bp GTGCGTAAGGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTCCTCGACAGCCGTCTTaGGTGGAAGCCGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: VRKGRKRIMDCAVHPGHRPRQPS*VEAGPW
Trigger: CCATGGCCCGGCTTCCACTCAAGACGGCTGTCGAGG...ACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR GCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTGCCGGCCTGACCTCCTaGTCCGAGCTCGGGGCGATT +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRAGLTS*SELGAI
Trigger: AATCGCCCCGAGCTCGGAGCAGGAGGTCAGGCCGGC...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp AAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGAGGCCTTAGGACAGGCACGGGGGTTGAACACATaGAGGTGCGCAGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: KQTQIATGLVPGEALGQARGLNT*RCAGRG
Trigger: GCCTCTACCTGCGCACCTGCATGTGTTCAACCCCCG...TGCCTGTCCTAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGAGGTAGTTGTGCATGGTaGAGAGACCGCAGCCCCGAA +
Preference number: 4 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRGSCAW*RDRSPE
Trigger: TTCGGGGCTGCGGTCTCTGCACCATGCACAACTACC...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATAGGCATCTGGCTCCAAGGTaGCCTGGATCATGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RGRCLGTFLLPVLLTEHRHLAPR*PGSWFR
Trigger: CCTGAACCATGATCCAGGGCACCTTGGAGCCAGATG...CCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR GCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGAGTGGCACTGCCCCGTTaGTGTCCTAATGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRVALPR*CPNASL
Trigger: CAGAGAGGCATTAGGACAGCAACGGGGCAGTGCCAC...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp TGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATAGGAAGTGTGAACTCGGGACACTCCCTTaGGGCCTGTCTTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CLGTFLLPVLLTEHRKCELGTLP*GLSCLG
Trigger: CCCCAGGCAAGACAGGCCCCAAGGGAGTGTCCCGAG...TTCACACTTCCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp ATCCTGGACACCGTGCGAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTTGGAGCAGACGGCCTTaGCACCGGAGCCACGGATGC +
Preference number: 4 (lower is better)
Translates to: ILDTVRGAHSCDLVSHNSWSRRP*HRSHGC
Trigger: GCATCCGTGGCTCCGGTGCCAAGGCCGTCTGCTCCA...AGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTCGCACGGTGTCCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CTTGAGAATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGTGCCACGATGTCGCTaGAACGCCGGTGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LENPQCQTDPDSYGVGTWVPRCR*NAGGWH
Trigger: GTGCCAGCCACCGGCGTTCCAGCGACATCGTGGCAC...CCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AGGCAGAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCAGAGTCAGGATGAATaGACTGAGGACCCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: RQKVPEARALPGDVFAPCQSQDE*TEDPGA
Trigger: AGCACCGGGGTCCTCAGTCCATTCATCCTGACTCTG...ACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGAGGCCTTAGGACAGGCACCAGAGGGGACCATCTaGCTCCAAGGTGCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: KQTQIATGLVPGEALGQAPEGTI*LQGALD
Trigger: ATCCAGGGCACCTTGGAGCCAGATGGTCCCCTCTGG...TGCCTGTCCTAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp ATCCTGGACACCGTGCGAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTGTAAGGCCAGCGCTGTaGCAGCCACCACAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: ILDTVRGAHSCDLVSHNSVRPAL*QPPQPA
Trigger: CGCTGGCTGTGGTGGCTGCCACAGCGCTGGCCTTAC...AGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTCGCACGGTGTCCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp CGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATAGGATGAGGTTGAGGTGGTaGCTGAGGTTGGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RGRCLGTFLLPVLLTEHRMRLRW*LRLVLS
Trigger: GCTCAGCACCAACCTCAGCCACCACCTCAACCTCAT...CCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp GTGCGTAAGGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGGTTGGGACTGGGACTaGGGCTGGGGCTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: VRKGRKRIMDCAVHPGHRGWDWD*GWGWSC
Trigger: GCAACTCCAGCCCCAGCCCCAGTCCCAGTCCCAACC...ACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR TCA 90 bp TTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCCCTCCTGCTTTTCCGTaGGCGCCCCGCTGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: LGDRRPLSTFYRQGEREVPPAFP*APRCGR
Trigger: CCGGCCGCAGCGGGGCGCTCACGGAAAAGCAGGAGG...GACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp AGCAAGCTGAGAGGGTCTGTAAGTAGGTACGGAATTGAGTCAGGAAACAGTCTGCCAGGGCCACCAGCTTaGGCTGGGCTCGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SKLRGSVSRYGIESGNSLPGPPA*AGLGPA
Trigger: AGCAGGCCCGAGCCCAGCTCAAGCTGGTGGCCCTGG...CAGACTGTTTCCTGACTCAATTCCGTACCTACTTACAGACCCTCTCAGCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTGCCTGCCACTCAGAGTaGGGTCTGCAGCCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRACHSE*GLQPVL
Trigger: GAGGACCGGCTGCAGACCTCACTCTGAGTGGCAGGC...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp TTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCCACAGAGGCCTGGGCTaGGGCACCGGCCAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: LGDRRPLSTFYRQGEREVHRGLG*GTGQRL
Trigger: CAGGCGCTGGCCGGTGCCTCAGCCCAGGCCTCTGTG...GACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR TCA 90 bp ATCCTGGACACCGTGCGAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTGGTTCTGCCGCCTCTTaGTCGTGCCCGGAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: ILDTVRGAHSCDLVSHNSGSAAS*SCPEPN
Trigger: GTTTGGCTCCGGGCACGATCAAGAGGCGGCAGAACC...AGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTCGCACGGTGTCCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR GCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTCACCGGAGCCACGGATaGCCCCCGCCAGAAACAGGT +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRHRSHG*PPPETG
Trigger: ACCTGTTTCTGGCGGGGGGCATCCGTGGCTCCGGTG...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CTTGAGAATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGCTGCGTTTCCGTAGCTaGGGTACCGGCTGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: LENPQCQTDPDSYGVGTWLRFRS*GTGCER
Trigger: GCGCTCACAGCCGGTACCCCAGCTACGGAAACGCAG...CCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp TGTGAATGTTTTCTACCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAACAGGTAGTTGTGCATaGTGCAGAGACCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: CECFLPPPLSAQQSSSEPTGSCA*CRDRSP
Trigger: GGGGCTGCGGTCTCTGCACCATGCACAACTACCTGT...TGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGGTAGAAAACATTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAACAGGTAGTTGTGCATaGTGCAGAGACCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KKGPDRDIQAGGWSGAQSTGSCA*CRDRSP
Trigger: GGGGCTGCGGTCTCTGCACCATGCACAACTACCTGT...TGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTTGGAGCAGACGGCCTTaGCACCGGAGCCACGGATGC +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRWSRRP*HRSHGC
Trigger: GCATCCGTGGCTCCGGTGCCAAGGCCGTCTGCTCCA...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GTGCGTAAGGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGGCGAGGGCGTTGCCTaGGGACGTTTTTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VRKGRKRIMDCAVHPGHRGEGVA*GRFCSL
Trigger: CAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCC...ACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTAGTTGCGGCTGCAGCTaGACTTGGGGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRSCGCS*TWGWGW
Trigger: CCAGCCCCAGCCCCAAGTCCAGCTGCAGCCGCAACT...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
3UTR CAA 72 bp AAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTaGCTCCCTGTCCTGCTGACAGAGCATAGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: KSQRRGRCLGTF*LPVLLTEHRKC
Trigger: ACACTTCCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTACTCTCCTGAGGCTTTaGCCCGTCAGCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRTLLRL*PVSWGR
Trigger: CCTGCCCCAGCTGACGGGTCAAAGCCTCAGGAGAGT...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGACTGTACCTGTCCCTATaGCTGTCCCCACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRLYLSL*LSPLKK
Trigger: CTTCTTCAGTGGGGACAGTCATAGGGACAGGTACAG...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp ACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCGGCCGGTCCGCAGGCTaGGGATGCGCTCGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: TDVHCPHFIDKEKGKSNVGRSAG*GCARGR
Trigger: CCGACCGCGAGCGCATCCTCAGCCTGCGGACCGGCC...GACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp TCTCCCACAACTCTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAACCAGGGCCACCAGCTTaGGCTGGGCTCGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SPTTLLGDRRPLSTFYRQPGPPA*AGLGPA
Trigger: AGCAGGCCCGAGCCCAGCTCAAGCTGGTGGCCCTGG...TTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAGAGTTGTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp GTGCGTAAGGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGGGCGATTTCGCACCTaGTGCGTTTCCGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VRKGRKRIMDCAVHPGHRGRFRT*CVSVAG
Trigger: CCCAGCTACGGAAACGCAGCAGGTGCGAAATCGCCC...ACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp AGCAAGCTGAGAGGGTCTGTAAGTAGGTACGGAATTGAGTCAGGAAACAGTCTGAGGCCGGGCTCTCCGTaGTGCTGGGCAAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SKLRGSVSRYGIESGNSLRPGSP*CWAKAS
Trigger: GCTGGCCTTTGCCCAGCAGCACGGAGAGCCCGGCCT...CAGACTGTTTCCTGACTCAATTCCGTACCTACTTACAGACCCTCTCAGCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp TTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCGCACCGGCCAGCGCCTaGCCCAAGGGCTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LGDRRPLSTFYRQGEREVAPASA*PKGCPV
Trigger: AACTGGGCAGCCCTTGGGGCAGGCGCTGGCCGGTGC...GACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp CTTGAGAATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGTCTCGGAGCTTCTTaGCTGTGGCTGACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LENPQCQTDPDSYGVGTWGLGAS*LWLTSS
Trigger: GCTGGAGGTCAGCCACAGCCAAGAAGCTCCGAGACC...CCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTCCGATCCCAGCCTCGGGCCTGCTGCATaGGCCGAACCTGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KAEGESCPETRAGSSDPSLGPAA*AEPGSR
Trigger: TCTGGAGCCAGGTTCGGCCCATGCAGCAGGCCCGAG...GCTGGGATCGGAACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp TCTCCCACAACTCTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGGCCTGGCCTGGTGTaGGCTGGGGGTATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPTTLLGDRRPLSTFYRQGPGLV*AGGMGR
Trigger: CCTGCCCATACCCCCAGCCCACACCAGGCCAGGCCC...TTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAGAGTTGTGGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCGGAGAAAACGCATCATaGATTGTGCTGTGCATCCTG +
Preference number: 4 (lower is better)
Translates to: ESPRGEGVAWGRFCSLSCGENAS*IVLCIL
Trigger: CAGGATGCACAGCACAATCCATGATGCGTTTTCTCC...GCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTGCTGCAATAGAGGCCTaGTGGCAGGCTGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRAAIEA*WQAGSA
Trigger: TGCACTGCCAGCCTGCCATCAGGCCTCTATTGCAGC...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR TCA 90 bp TCTCCCACAACTCTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGCGAGAGGACGCCCTaGCACCACCTGTCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: SPTTLLGDRRPLSTFYRQGERTP*HHLSPP
Trigger: AGGCGGAGACAGGTGGTGTCAGGGCGTCCTCTCGCC...TTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAGAGTTGTGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR TCA 90 bp CTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAACCAGAGCCTTCCGTCTaGGACCCAGGCTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LLGDRRPLSTFYRQGEREPEPSV*DPGCRA
Trigger: CGCCCTGCAGCCTGGGTCTCAGACGGAAGGCTCTGG...TTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR GCA 90 bp TCTCCCACAACTCTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAACCGGGCTCTCCGTGCTaGTGGGCAAAGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: SPTTLLGDRRPLSTFYRQPGSPC*WAKAST
Trigger: CGTGCTGGCCTTTGCCCAGCAGCACGGAGAGCCCGG...TTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAGAGTTGTGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CTTGAGAATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGTAGTTGTGCATGGTaGAGAGACCGCAGCCCCGAA +
Preference number: 4 (lower is better)
Translates to: LENPQCQTDPDSYGVGTWGSCAW*RDRSPE
Trigger: TTCGGGGCTGCGGTCTCTGCACCATGCACAACTACC...CCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp TTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAGCTGGGCTCGGGCCTaGTGCATGGGCCGAACCTGG +
Preference number: 4 (lower is better)
Translates to: LGDRRPLSTFYRQGEREVSWARA*CMGRTW
Trigger: CCAGGTTCGGCCCATGCAGCAGGCCCGAGCCCAGCT...GACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp AAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTCCGATCCCAGCACTCAGAGTGAGGTCTaGAGCCGGTCCTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: KAEGESCPETRAGSSDPSTQSEV*SRSSGG
Trigger: GCCCCCTGAGGACCGGCTGCAGACCTCACTCTGAGT...GCTGGGATCGGAACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp GTGCGTAAGGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTTGCAGACAGCAGGGCTaGACCAGCGGACCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: VRKGRKRIMDCAVHPGHRCRQQG*TSGPVS
Trigger: TGAAACTGGTCCGCTGGTGCAGCCCTGCTGTCTGCA...ACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp ATCCTGGACACCGTGCGAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTGCATCCTGGACACCGTaGGAGGTGCTCATAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ILDTVRGAHSCDLVSHNSASWTP*EVLIAV
Trigger: CACAGCTATGAGCACCTCGCACGGTGTCCAGGATGC...AGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTCGCACGGTGTCCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp AAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTCCGATCCCAGCGTCCTAATGCCTCTCTaGGGGCCTCCTCGACAGCCG +
Preference number: 4 (lower is better)
Translates to: KAEGESCPETRAGSSDPSVLMPL*GPPRQP
Trigger: CGGCTGTCGAGGAGGCCCGCAGAGAGGCATTAGGAC...GCTGGGATCGGAACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR GCA 90 bp AGCAAGCTGAGAGGGTCTGTAAGTAGGTACGGAATTGAGTCAGGAAACAGTCTGCCGCGGGGGTGGCACTaGCCCGTTGCTGTCCTAATG +
Preference number: 4 (lower is better)
Translates to: SKLRGSVSRYGIESGNSLPRGWH*PVAVLM
Trigger: CATTAGGACAGCAACGGGGCAGTGCCACCCCCGCGG...CAGACTGTTTCCTGACTCAATTCCGTACCTACTTACAGACCCTCTCAGCTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp AGCAAGCTGAGAGGGTCTGTAAGTAGGTACGGAATTGAGTCAGGAAACAGTCTGAGTGTGTGGAAGTGCTaGGACCCACGGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SKLRGSVSRYGIESGNSLSVWKC*DPRGSR
Trigger: CCGGGAGCCCCGTGGGTCCCAGCACTTCCACACACT...CAGACTGTTTCCTGACTCAATTCCGTACCTACTTACAGACCCTCTCAGCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTGGCTGGGCGATCCGTTaGTCTCGGAGCTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRGWAIR*SRSFLA
Trigger: AGCCAAGAAGCTCCGAGACCAACGGATCGCCCAGCC...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CTTGAGAATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGAGCAGAAGACCTCGTTaGAGCAGACGGCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LENPQCQTDPDSYGVGTWSRRPR*SRRPWH
Trigger: GTGCCAAGGCCGTCTGCTCCAACGAGGTCTTCTGCT...CCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTCCGATCCCAGCAGGGCTGCAGCTCCTTaGCCTGGAACTGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: KAEGESCPETRAGSSDPSRAAAP*PGTGQS
Trigger: GGACTGCCCAGTTCCAGGCCAAGGAGCTGCAGCCCT...GCTGGGATCGGAACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AGAAAGAGGCTGAGGGAGTCTGGGCTTCAAAATAATCGACAACCTTTAAAGCAGGTGGTGAGCCCGGAGTaGGCCTGGCCTGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RKRLRESGLQNNRQPLKQVVSPE*AWPGVG
Trigger: GCCCACACCAGGCCAGGCCCACTCCGGGCTCACCAC...CTGCTTTAAAGGTTGTCGATTATTTTGAAGCCCAGACTCCCTCAGCCTCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AGCAAGCTGAGAGGGTCTGTAAGTAGGTACGGAATTGAGTCAGGAAACAGTCTGGGCTTCTGGAGGGGCTaGGAGAGCCCCACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SKLRGSVSRYGIESGNSLGFWRG*ESPTRL
Trigger: CAGCCTTGTGGGGCTCTCCCAGCCCCTCCAGAAGCC...CAGACTGTTTCCTGACTCAATTCCGTACCTACTTACAGACCCTCTCAGCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GTGCGTAAGGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTTTAGAGATCGGGGGTTaGCGAGAAGTGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: VRKGRKRIMDCAVHPGHRLEIGG*REVGWA
Trigger: AGCCCACCCCACTTCTCGCCAACCCCCGATCTCTAA...ACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp TGTGAATGTTTTCTACCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAATCCAGGCTGGAGGTTaGAGTGGAGCACAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: CECFLPPPLSAQQSSSEPIQAGG*SGAQSD
Trigger: ATCTGACTGTGCTCCACTCCAACCTCCAGCCTGGAT...TGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGGTAGAAAACATTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GTGCGTAAGGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTAGGGCCTGGGAATGGTaGGGTCTCTGCTTGCACTCA +
Preference number: 4 (lower is better)
Translates to: VRKGRKRIMDCAVHPGHRRAWEW*GLCLHS
Trigger: TGAGTGCAAGCAGAGACCCCACCATTCCCAGGCCCT...ACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp GTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCTCGTCCGGGACAGGGCTCTGCTaGCCGCGTCCTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VHCPHFIDKEKGKSNVSSGTGLC*PRPGGS
Trigger: AGAGCCCCCAGGACGCGGCCAGCAGAGCCCTGTCCC...GGACGAGACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
3UTR CAA 72 bp TCCTGGACACCGTGCGAGGTGCTCATAGCTGTGATCTaGTCTCCCACAACTCTCTTGGGTGACAGACGTCCA +
Preference number: 4 (lower is better)
Translates to: SWTPCEVLIAVI*SPTTLLGDRRP
Trigger: TGGACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTCGCACGGTGTCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp CGACAACCTTTAAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTCTGGGGTACCGGCTGTaGGCGCCTCGCAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RQPLKQKGKVVQKQEQEVLGYRL*APRRGG
Trigger: TCCTCCTCTGCGAGGCGCTCACAGCCGGTACCCCAG...AACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTTAAAGGTTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTTCTGCAGAAACACCATaGGCTTCCGGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRSAETP*ASGPPP
Trigger: AGGAGGAGGCCCGGAAGCTCATGGTGTTTCTGCAGA...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp TGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAGAGGTGACCCCCGGTaGCGTAGATGTCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: WVTDVHCPHFIDKEKGKSRGDPR*RRCPHG
Trigger: GCCGTGGGGACATCTACGTCACCGGGGGTCACCTCT...TGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CTTGAGAATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGCGATTTCGCACCTGCTaGGTTTCCGTAGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: LENPQCQTDPDSYGVGTWRFRTC*VSVAGV
Trigger: TACCCCAGCTACGGAAACGCAGCAGGTGCGAAATCG...CCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CGACAACCTTTAAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTAGCTGGGCTCGGGCCTaGTGCATGGGCCGAACCTGG +
Preference number: 4 (lower is better)
Translates to: RQPLKQKGKVVQKQEQEVSWARA*CMGRTW
Trigger: CCAGGTTCGGCCCATGCAGCAGGCCCGAGCCCAGCT...AACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTTAAAGGTTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CTTGAGAATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGTCGTAGCACTCCATaGTGTACAGGCATTCGCCAC +
Preference number: 4 (lower is better)
Translates to: LENPQCQTDPDSYGVGTWGRSTP*CTGIRH
Trigger: GTGGCGAATGCCTGTACAGCATGGAGTGCTACGACC...CCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp ATCCTGGACACCGTGCGAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTGGCAGTAAATGGTGTTaGCCAGGGTGGTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: ILDTVRGAHSCDLVSHNSGSKWC*PGWCSA
Trigger: TGCACTGCACCACCCTGGGCAACACCATTTACTGCC...AGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTCGCACGGTGTCCAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CTTGAGAATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGCAGTAAATGGTGTTaGCCAGGGTGGTGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LENPQCQTDPDSYGVGTWGSKWC*PGWCSA
Trigger: TGCACTGCACCACCCTGGGCAACACCATTTACTGCC...CCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp AAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGACTTGAGAATCCACAGTaGCAAACAGACCCAGATAGC +
Preference number: 4 (lower is better)
Translates to: KGPRQGHPGWRLEWSTVRLENPQ*QTDPDS
Trigger: GCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG...TCTGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp TGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATAGGAAGTGTGAATGCCTGGGGAAGGGGTaGCTTCTAAGAACCATGGCA +
Preference number: 4 (lower is better)
Translates to: CLGTFLLPVLLTEHRKCECLGKG*LLRTMA
Trigger: TGCCATGGTTCTTAGAAGCCACCCCTTCCCCAGGCA...TTCACACTTCCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp TCTCCCACAACTCTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGCCACCAGCTTGAGCTaGGCTCGGGCCTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: SPTTLLGDRRPLSTFYRQATSLS*ARACCM
Trigger: CATGCAGCAGGCCCGAGCCCAGCTCAAGCTGGTGGC...TTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAGAGTTGTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTCCGATCCCAGCGGCATTCGCCACCGATaGCATAGAGCAGCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: KAEGESCPETRAGSSDPSGIRHR*HRAARP
Trigger: TGGACGGGCTGCTCTATGCCATCGGTGGCGAATGCC...GCTGGGATCGGAACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AGCAAGCTGAGAGGGTCTGTAAGTAGGTACGGAATTGAGTCAGGAAACAGTCTGTCGCTGGAACGCCGGTaGCTGGCACTGTATGGGCAC +
Preference number: 4 (lower is better)
Translates to: SKLRGSVSRYGIESGNSLSLERR*LALYGH
Trigger: GTGCCCATACAGTGCCAGCCACCGGCGTTCCAGCGA...CAGACTGTTTCCTGACTCAATTCCGTACCTACTTACAGACCCTCTCAGCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTGCCACGATGTCGCTaGAACGCCGGTGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LLGDRRPLSTFYRQGEREVPRCR*NAGGWH
Trigger: GTGCCAGCCACCGGCGTTCCAGCGACATCGTGGCAC...TTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CTTGAGAATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGCCAAGTCCTTGTCTGTaGAGACGCATCAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LENPQCQTDPDSYGVGTWPSPCL*RRISPW
Trigger: CCAGGGACTGATGCGTCTCCACAGACAAGGACTTGG...CCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp ACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCGTGGTGAGCCCGGAGTaGGCCTGGCCTGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: TDVHCPHFIDKEKGKSNVVVSPE*AWPGVG
Trigger: GCCCACACCAGGCCAGGCCCACTCCGGGCTCACCAC...GACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CGACAACCTTTAAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTCTGCTGGCCGCGTCCTaGGGGCTCTGGTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RQPLKQKGKVVQKQEQEVLLAAS*GLWFPL
Trigger: CAGGGGAAACCAGAGCCCCCAGGACGCGGCCAGCAG...AACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTTAAAGGTTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp TTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCGACAGCCGTCTTGAGTaGAAGCCGGGCCATGGCGGC +
Preference number: 4 (lower is better)
Translates to: LGDRRPLSTFYRQGEREVDSRLE*KPGHGG
Trigger: GCCGCCATGGCCCGGCTTCCACTCAAGACGGCTGTC...GACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp CGACAACCTTTAAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTCGTGGAGTCTGGGGCTaGGCCAAAGCTCCGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RQPLKQKGKVVQKQEQEVRGVWG*AKAPGA
Trigger: GGCACCCGGAGCTTTGGCCCAGCCCCAGACTCCACG...AACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTTAAAGGTTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
3UTR CAA 72 bp CAGCGGACCAGTTTCAGAGGCAAGGGTTCTAGGCCCTaGAGAATCCACAGTGCCAAACAGACCCAGATAGCT +
Preference number: 4 (lower is better)
Translates to: QRTSFRGKGSRP*RIHSAKQTQIA
Trigger: AGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAGGGCCTAGAACCCTTGCCTCTGAAACTGGTCCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp AGAAAGAGGCTGAGGGAGTCTGGGCTTCAAAATAATCGACAACCTTTAAAGCAGTTCCGGGCCTCCTCCTaGTTTTCCGTGAGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: RKRLRESGLQNNRQPLKQFRASS*FSVSAP
Trigger: CGGGGCGCTCACGGAAAAGCAGGAGGAGGCCCGGAA...CTGCTTTAAAGGTTGTCGATTATTTTGAAGCCCAGACTCCCTCAGCCTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp TGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGGAGGCCTTAGGACACTTGAGAATCCACAGTaGCAAACAGACCCAGATAGC +
Preference number: 4 (lower is better)
Translates to: CQTDPDSYGVGTWGGLRTLENPQ*QTDPDS
Trigger: GCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG...TGTCCTAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp GTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCTCGTCCGGAGCCCAGGGTCTCTaGAAGCACCCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VHCPHFIDKEKGKSNVSSGAQGL*KHPTSS
Trigger: GGAGCTGGTGGGGTGCTTGCAGAGACCCTGGGCTCC...GGACGAGACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp CGACAACCTTTAAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTAGTGTGTGGAAGTGCTaGGACCCACGGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RQPLKQKGKVVQKQEQEVSVWKC*DPRGSR
Trigger: CCGGGAGCCCCGTGGGTCCCAGCACTTCCACACACT...AACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTTAAAGGTTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp TGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATAGGAAGTGTGAACCTGGCTCCAGATGTTaGTCAGAGGGTTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: CLGTFLLPVLLTEHRKCEPGSRC*SEGCSR
Trigger: TCTGCTACAACCCTCTGACCAACATCTGGAGCCAGG...TTCACACTTCCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AGAAAGAGGCTGAGGGAGTCTGGGCTTCAAAATAATCGACAACCTTTAAAGCAGCTCGGGCCTGCTGCATaGGCCGAACCTGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RKRLRESGLQNNRQPLKQLGPAA*AEPGSR
Trigger: TCTGGAGCCAGGTTCGGCCCATGCAGCAGGCCCGAG...CTGCTTTAAAGGTTGTCGATTATTTTGAAGCCCAGACTCCCTCAGCCTCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCTCGTCCCAGGCCACAGCCTCGTaGGCCACAGGGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VHCPHFIDKEKGKSNVSSQATAS*ATGKVP
Trigger: AGGCACCTTCCCTGTGGCCCACGAGGCTGTGGCCTG...GGACGAGACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp AGCAAGCTGAGAGGGTCTGTAAGTAGGTACGGAATTGAGTCAGGAAACAGTCTGAGAGCCACACTCTCCTaGGGCTTTGACCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SKLRGSVSRYGIESGNSLRATLS*GFDPSA
Trigger: AGCTGACGGGTCAAAGCCTCAGGAGAGTGTGGCTCT...CAGACTGTTTCCTGACTCAATTCCGTACCTACTTACAGACCCTCTCAGCTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR TCA 90 bp CTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAATGTTCTCCCGGGGGTTaGACACATGCAGGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: LLGDRRPLSTFYRQGERECSPGG*THAGAQ
Trigger: CTGCGCACCTGCATGTGTTCAACCCCCGGGAGAACA...TTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp TCTCCCACAACTCTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAACGGGGGTTGAACACATaGAGGTGCGCAGGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: SPTTLLGDRRPLSTFYRQRGLNT*RCAGRG
Trigger: GCCTCTACCTGCGCACCTGCATGTGTTCAACCCCCG...TTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAGAGTTGTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp TCTCCCACAACTCTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAACAGAGGCGAGGGCGTTaGCTGGGGACGTTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SPTTLLGDRRPLSTFYRQQRRGR*LGTFLL
Trigger: GAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTG...TTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAGAGTTGTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CGACAACCTTTAAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTGGTATGGGCAGGAGCTaGAGACAGCAGGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: RQPLKQKGKVVQKQEQEVGMGRS*RQQGCT
Trigger: GGTGCAGCCCTGCTGTCTGCAGCTCCTGCCCATACC...AACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTTAAAGGTTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp TGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAATGGCAGGCTGGCAGTaGATGCAGAGCACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: WVTDVHCPHFIDKEKGKSMAGWQ*MQSTEA
Trigger: GGCCTCTGTGCTCTGCATGCACTGCCAGCCTGCCAT...TGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR GCA 90 bp CTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAATGTGGACACCGGTTCTaGCGCCTCTTGATCGTGCCC +
Preference number: 4 (lower is better)
Translates to: LLGDRRPLSTFYRQGERECGHRF*RLLIVP
Trigger: GGGCACGATCAAGAGGCGGCAGAACCGGTGTCCACA...TTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTCCTGGCTCCAGATGTTaGTCAGAGGGTTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRPGSRC*SEGCSR
Trigger: TCTGCTACAACCCTCTGACCAACATCTGGAGCCAGG...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAACCAGGAGGGTCTCCCTaGAGAGCAGCGAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLGDRRPLSTFYRQGEREPGGSP*RAAKQL
Trigger: AAGCTGCTTCGCTGCTCTCCAGGGAGACCCTCCTGG...TTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp ACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCGGCTTCTGGAGGGGCTaGGAGAGCCCCACAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TDVHCPHFIDKEKGKSNVGFWRG*ESPTRL
Trigger: CAGCCTTGTGGGGCTCTCCCAGCCCCTCCAGAAGCC...GACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGCGAGGTGCTCGGAGAAAACGCATCATaGATTGTGCTGTGCATCCTG +
Preference number: 4 (lower is better)
Translates to: EKTHHGLCCASWTPCEVLGENAS*IVLCIL
Trigger: CAGGATGCACAGCACAATCCATGATGCGTTTTCTCC...GAGCACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTATCCAGGCTGGAGGTTaGAGTGGAGCACAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRIQAGG*SGAQSD
Trigger: ATCTGACTGTGCTCCACTCCAACCTCCAGCCTGGAT...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AGAAAGAGGCTGAGGGAGTCTGGGCTTCAAAATAATCGACAACCTTTAAAGCAGCCCTTGGGACGAGAGTaGGCGACCTTGAGGCGGACT +
Preference number: 4 (lower is better)
Translates to: RKRLRESGLQNNRQPLKQPLGRE*ATLRRT
Trigger: AGTCCGCCTCAAGGTCGCCCACTCTCGTCCCAAGGG...CTGCTTTAAAGGTTGTCGATTATTTTGAAGCCCAGACTCCCTCAGCCTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR GCA 90 bp CTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAATGCAGACAGCAGGGCTaGACCAGCGGACCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: LLGDRRPLSTFYRQGERECRQQG*TSGPVS
Trigger: TGAAACTGGTCCGCTGGTGCAGCCCTGCTGTCTGCA...TTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CTTGAGAATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGGCATGGGTTTCAAAGTaGGTAAGGGGAGAAAACGCA +
Preference number: 4 (lower is better)
Translates to: LENPQCQTDPDSYGVGTWAWVSK*VRGENA
Trigger: TGCGTTTTCTCCCCTTACGCACTTTGAAACCCATGC...CCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CGACAACCTTTAAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTCAGCTCAGCTCCTCCTaGCTGATGAGGTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RQPLKQKGKVVQKQEQEVQLSSS*LMRLSP
Trigger: GGGGCTCAACCTCATCAGGCAGGAGGAGCTGAGCTG...AACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTTAAAGGTTGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR GCA 90 bp GAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTTGGGTGACAGACGTATCATGGTTCAGGGCTaGAATAGAGGCCTGATGGCA +
Preference number: 4 (lower is better)
Translates to: EVLIAVILSPTTLLGDRRIMVQG*NRGLMA
Trigger: TGCCATCAGGCCTCTATTGCAGCCCTGAACCATGAT...ACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp ACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCCCTCCTGGTAGCGCCTaGGGAGAGCCACACTCTCCT +
Preference number: 4 (lower is better)
Translates to: TDVHCPHFIDKEKGKSNVPPGSA*GEPHSP
Trigger: AGGAGAGTGTGGCTCTCCCCAGGCGCTACCAGGAGG...GACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AGAAAGAGGCTGAGGGAGTCTGGGCTTCAAAATAATCGACAACCTTTAAAGCAGGGTCTCGGAGCTTCTTaGCTGTGGCTGACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RKRLRESGLQNNRQPLKQGLGAS*LWLTSS
Trigger: GCTGGAGGTCAGCCACAGCCAAGAAGCTCCGAGACC...CTGCTTTAAAGGTTGTCGATTATTTTGAAGCCCAGACTCCCTCAGCCTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AGAAAGAGGCTGAGGGAGTCTGGGCTTCAAAATAATCGACAACCTTTAAAGCAGGGCATTCGCCACCGATaGCATAGAGCAGCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: RKRLRESGLQNNRQPLKQGIRHR*HRAARP
Trigger: TGGACGGGCTGCTCTATGCCATCGGTGGCGAATGCC...CTGCTTTAAAGGTTGTCGATTATTTTGAAGCCCAGACTCCCTCAGCCTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AGAAAGAGGCTGAGGGAGTCTGGGCTTCAAAATAATCGACAACCTTTAAAGCAGTGGAACGCCGGTGGCTaGCACTGTATGGGCACTCGT +
Preference number: 4 (lower is better)
Translates to: RKRLRESGLQNNRQPLKQWNAGG*HCMGTR
Trigger: ACGAGTGCCCATACAGTGCCAGCCACCGGCGTTCCA...CTGCTTTAAAGGTTGTCGATTATTTTGAAGCCCAGACTCCCTCAGCCTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp TCTCCCACAACTCTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAACCCACGGAAGGATCCTaGGTAACCTCCAGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SPTTLLGDRRPLSTFYRQPTEGS*VTSRGK
Trigger: TTTGCCCCTGGAGGTTACCCAGGATCCTTCCGTGGG...TTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAGAGTTGTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR TCA 90 bp TGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCATGCTCCCTGTCCTGCTaGCAGAGCATAGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: WVTDVHCPHFIDKEKGKSCSLSC*QSIGSV
Trigger: CACACTTCCTATGCTCTGTCAGCAGGACAGGGAGCA...TGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp TGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCACGATTTCGCACCTGCTaGGTTTCCGTAGCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: WVTDVHCPHFIDKEKGKSRFRTC*VSVAGV
Trigger: TACCCCAGCTACGGAAACGCAGCAGGTGCGAAATCG...TGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR GCA 90 bp CTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAACCTTAGACTTCGGTTaGAGGGCCAGCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLGDRRPLSTFYRQGERETLDFG*RASSAP
Trigger: AGGAGCTGAGCTGGCCCTGCAACCGAAGTCTAAGGT...TTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CCA 90 bp GTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCTCGTCCGTGGCTGGCACTGTATaGGCACTCGTCCCAAGCATC +
Preference number: 4 (lower is better)
Translates to: VHCPHFIDKEKGKSNVSSVAGTV*ALVPSI
Trigger: GATGCTTGGGACGAGTGCCCATACAGTGCCAGCCAC...GGACGAGACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AGAAAGAGGCTGAGGGAGTCTGGGCTTCAAAATAATCGACAACCTTTAAAGCAGTTAGAGATCGGGGGTTaGCGAGAAGTGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: RKRLRESGLQNNRQPLKQLEIGG*REVGWA
Trigger: AGCCCACCCCACTTCTCGCCAACCCCCGATCTCTAA...CTGCTTTAAAGGTTGTCGATTATTTTGAAGCCCAGACTCCCTCAGCCTCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGGTGTCAGTAGGGCCTaGCTGCAGATATCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LLGDRRPLSTFYRQGEREGVSRA*LQISGD
Trigger: GTCTCCTGATATCTGCAGCCAGGCCCTACTGACACC...TTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR TCA 90 bp GTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCTCGTCCTGCTCCCTGTCCTGCTaGCAGAGCATAGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: VHCPHFIDKEKGKSNVSSCSLSC*QSIGSV
Trigger: CACACTTCCTATGCTCTGTCAGCAGGACAGGGAGCA...GGACGAGACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp AGAAAGAGGCTGAGGGAGTCTGGGCTTCAAAATAATCGACAACCTTTAAAGCAGCAGAGTCAGGATGAATaGACTGAGGACCCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: RKRLRESGLQNNRQPLKQQSQDE*TEDPGA
Trigger: AGCACCGGGGTCCTCAGTCCATTCATCCTGACTCTG...CTGCTTTAAAGGTTGTCGATTATTTTGAAGCCCAGACTCCCTCAGCCTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp ACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCCAGGGACATCCAGGCTaGAGGTTGGAGTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: TDVHCPHFIDKEKGKSNVQGHPG*RLEWST
Trigger: TGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTG...GACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp ACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCCCAAGTCCTTGTCTGTaGAGACGCATCAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TDVHCPHFIDKEKGKSNVPSPCL*RRISPW
Trigger: CCAGGGACTGATGCGTCTCCACAGACAAGGACTTGG...GACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp CGACAACCTTTAAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTAGGTGCCCTGGATCATaGTTCAGGGCTGCAATAGAG +
Preference number: 4 (lower is better)
Translates to: RQPLKQKGKVVQKQEQEVRCPGS*FRAAIE
Trigger: CTCTATTGCAGCCCTGAACCATGATCCAGGGCACCT...AACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTTAAAGGTTGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR GCA 90 bp TGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAGCATGGGTTTCAAAGTaGGTAAGGGGAGAAAACGCA +
Preference number: 4 (lower is better)
Translates to: WVTDVHCPHFIDKEKGKSAWVSK*VRGENA
Trigger: TGCGTTTTCTCCCCTTACGCACTTTGAAACCCATGC...TGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
3UTR CAA 72 bp GTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCTaGGGTGACAGACGTCCACTGTCCACATTTTATAGA +
Preference number: 4 (lower is better)
Translates to: VLIAVILSPTTL*GDRRPLSTFYR
Trigger: TCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAGAGTTGTGGGAGACAAGATCACAGCTATGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CCA 90 bp GTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCTCGTCCTTCACTTTTCTAGCATaGGTTTCAAAGTGCGTAAGG +
Preference number: 4 (lower is better)
Translates to: VHCPHFIDKEKGKSNVSSFTFLA*VSKCVR
Trigger: CCTTACGCACTTTGAAACCCATGCTAGAAAAGTGAA...GGACGAGACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS GCA 90 bp CGGGCGAGGCTCACGGCTCCGGGAGGGCGCGCGGCTGTGGCCGGCTaGAGCCGGCTTTGCTTGCTCCGGGGGCCGGGTGGGCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: RARLTAPGGRAAVAG*SRLCLLRGPGGPQV
Trigger: GACCTGGGGCCCACCCGGCCCCCGGAGCAAGCAAAGCCGGCTGCAGCCGGCCACAGCCGCGCGCCCTCCCGGAGCCGTGAGCCTCGCCCG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS TCA 90 bp GTACGAGGACGCCCAGCACCGCCCGGCCCCGGCCGGTCCGCAGGCTaGGGATGCGCTCGCGGTCGGCCGCGCTCAGCCGGCGGTAGAGGC +
Preference number: 5 (lower is better)
Translates to: VRGRPAPPGPGRSAG*GCARGRPRSAGGRG
Trigger: GCCTCTACCGCCGGCTGAGCGCGGCCGACCGCGAGCGCATCCTCAGCCTGCGGACCGGCCGGGGCCGGGCGGTGCTGGGCGTCCTCGTAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS TCA 90 bp TGTCCTGTTGCCCCGCGGGGCCTGCGGCCTGGCGAGAGGACGCCCTaGCACCACCTGTCTCCGCCTCCGCTTCGCTGCCAGGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: CPVAPRGLRPGERTP*HHLSPPPLRCQGSE
Trigger: CTCGGAGCCCTGGCAGCGAAGCGGAGGCGGAGACAGGTGGTGTCAGGGCGTCCTCTCGCCAGGCCGCAGGCCCCGCGGGGCAACAGGACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CCA 90 bp CTCGGGAGCTGTCAGCCCCGGCCTCGCCGGCATCGTAGGCCCCTGTaGCACCCGGCCCTTGGGACGAGAGTGGGCGACCTTGAGGCGGAC +
Preference number: 5 (lower is better)
Translates to: LGSCQPRPRRHRRPL*HPALGTRVGDLEAD
Trigger: GTCCGCCTCAAGGTCGCCCACTCTCGTCCCAAGGGCCGGGTGCCACAGGGGCCTACGATGCCGGCGAGGCCGGGGCTGACAGCTCCCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CAA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTGTGGCACCCGGCCCTaGGGACGAGAGTGGGCGACC +
Preference number: 5 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLACGTRP*GREWAT
Trigger: GGTCGCCCACTCTCGTCCCAAGGGCCGGGTGCCACA...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS TCA 90 bp GTTGCTGTCCTAATGCCTCTCTGCGGGCCTCCTCGACAGCCGTCTTaGGTGGAAGCCGGGCCATGGCGGCCAGGCCCCCGCCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: VAVLMPLCGPPRQPS*VEAGPWRPGPRPAL
Trigger: CAGCGCCGGGCGGGGGCCTGGCCGCCATGGCCCGGCTTCCACTCAAGACGGCTGTCGAGGAGGCCCGCAGAGAGGCATTAGGACAGCAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CCA 90 bp ACGAGAGTGGGCGACCTTGAGGCGGACTCTCTAGCCAGGGGCGCGTaGAGTCTGGGGCTGGGCCAAAGCTCCGGGTGCCCGGGACCTCCC +
Preference number: 5 (lower is better)
Translates to: TRVGDLEADSLARGA*SLGLGQSSGCPGPP
Trigger: GGGAGGTCCCGGGCACCCGGAGCTTTGGCCCAGCCCCAGACTCCACGCGCCCCTGGCTAGAGAGTCCGCCTCAAGGTCGCCCACTCTCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CCA 90 bp TGCTCCGAGCTCGGGGCGATTTCGCACCTGCTGCGTTTCCGTAGCTaGGGTACCGGCTGTGAGCGCCTCGCAGAGGAGGAGGCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: CSELGAISHLLRFRS*GTGCERLAEEEAAG
Trigger: CCCCGCGGCCTCCTCCTCTGCGAGGCGCTCACAGCCGGTACCCCAGCTACGGAAACGCAGCAGGTGCGAAATCGCCCCGAGCTCGGAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS GCA 90 bp ACAGAGGCCTGGGCTGAGGCACCGGCCAGCGCCTGCCCCAAGGGCTaGCCAGTTAAGGTGGACCAGTCCTCCAGGGCCTGGGAATGGTGG +
Preference number: 5 (lower is better)
Translates to: TEAWAEAPASACPKG*PVKVDQSSRAWEWW
Trigger: CCACCATTCCCAGGCCCTGGAGGACTGGTCCACCTTAACTGGGCAGCCCTTGGGGCAGGCGCTGGCCGGTGCCTCAGCCCAGGCCTCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CAA 90 bp CTGGGAGAGCCCCACAAGGCTGCAGAGGGTGGTGAGCCCGGAGTGGGCCTGGCCTCCTCGACAGCCGTCTaGAGTGGAAGCCGGGCCATG +
Preference number: 5 (lower is better)
Translates to: LGEPHKAAEGGEPGVGLASSTAV*SGSRAM
Trigger: CATGGCCCGGCTTCCACTCAAGACGGCTGTCGAGGA...GGCCAGGCCCACTCCGGGCTCACCACCCTCTGCAGCCTTGTGGGGCTCTCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CCA 90 bp CTGAAGAAGAGGGGCCGTGTCTGTCCTCAGAGTGTGTGGAAGTGCTaGGACCCACGGGGCTCCCGGGAACCGCCCTCGGGACACTCCCTT +
Preference number: 5 (lower is better)
Translates to: LKKRGRVCPQSVWKC*DPRGSREPPSGHSL
Trigger: AAGGGAGTGTCCCGAGGGCGGTTCCCGGGAGCCCCGTGGGTCCCAGCACTTCCACACACTCTGAGGACAGACACGGCCCCTCTTCTTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS CCA 90 bp TGGGGGAGGGTCTGGGCTGGGCGATCCGTTGGTCTCGGAGCTTCTTaGCTGTGGCTGACCTCCAGCCTCAACCAGGCCCCCTGTACCTGT +
Preference number: 5 (lower is better)
Translates to: WGRVWAGRSVGLGAS*LWLTSSLNQAPCTC
Trigger: ACAGGTACAGGGGGCCTGGTTGAGGCTGGAGGTCAGCCACAGCCAAGAAGCTCCGAGACCAACGGATCGCCCAGCCCAGACCCTCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS CCA 90 bp CCAGCTCAGCTCCTCCTGCCTGATGAGGTTGAGCCCCGAGGGCTGTaGACACCGGTTCTGCCGCCTCTTGATCGTGCCCGGAGCCAAACC +
Preference number: 5 (lower is better)
Translates to: PAQLLLPDEVEPRGL*TPVLPPLDRARSQT
Trigger: GGTTTGGCTCCGGGCACGATCAAGAGGCGGCAGAACCGGTGTCCACAGCCCTCGGGGCTCAACCTCATCAGGCAGGAGGAGCTGAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CAA 90 bp GAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCACCTCGGGACACTCCCTaGGGGCCTGTCTTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: EARALPGDVFAPCPADRAPRDTP*GPVLPG
Trigger: CCCAGGCAAGACAGGCCCCAAGGGAGTGTCCCGAGG...TGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS CCA 90 bp CCTCTCCTCTTAGGCCTGGGGGAGGGTCTGGGCTGGGCGATCCGTTaGTCTCGGAGCTTCTTGGCTGTGGCTGACCTCCAGCCTCAACCA +
Preference number: 5 (lower is better)
Translates to: PLLLGLGEGLGWAIR*SRSFLAVADLQPQP
Trigger: TGGTTGAGGCTGGAGGTCAGCCACAGCCAAGAAGCTCCGAGACCAACGGATCGCCCAGCCCAGACCCTCCCCCAGGCCTAAGAGGAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS CCA 90 bp CCCCAGTGCCACGATGTCGCTGGAACGCCGGTGGCTGGCACTGTATaGGCACTCGTCCCAAGCATCCTTCACGGGGCTGTACCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: PQCHDVAGTPVAGTV*ALVPSILHGAVPEQ
Trigger: CTGCTCAGGTACAGCCCCGTGAAGGATGCTTGGGACGAGTGCCCATACAGTGCCAGCCACCGGCGTTCCAGCGACATCGTGGCACTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp CCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAAGTCCTTGTCTGTGGCCAGAGGCGAGGGCGTaGCCTGGGGACGTTTTTGCT +
Preference number: 5 (lower is better)
Translates to: PPPLSAQQSSSEPSPCLWPEARA*PGDVFA
Trigger: AGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGG...CCACAGACAAGGACTTGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp GCAGAGCTCCAGCGAGCCAAGTCCTTGTCTGTGGAGACGCATCAGTCCCTGGCTCTGCTCCAGCCACCCTaGGCCCCAGAGCCTTCCGTC +
Preference number: 5 (lower is better)
Translates to: AELQRAKSLSVETHQSLALLQPP*APEPSV
Trigger: GACGGAAGGCTCTGGGGCCAAGGGTGGCTGGAGCAG...AGCCAGGGACTGATGCGTCTCCACAGACAAGGACTTGGCTCGCTGGAGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS GCA 90 bp AGAAGACCTCGTTGGAGCAGACGGCCTTGGCACCGGAGCCACGGATaGCCCCCGCCAGAAACAGGTAGTTGTGCATGGTGCAGAGACCGC +
Preference number: 5 (lower is better)
Translates to: RRPRWSRRPWHRSHG*PPPETGSCAWCRDR
Trigger: GCGGTCTCTGCACCATGCACAACTACCTGTTTCTGGCGGGGGGCATCCGTGGCTCCGGTGCCAAGGCCGTCTGCTCCAACGAGGTCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp AGGCAGAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTGGGCTGGGCGATCCGTaGGTCTCGGAGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: RQKVPEARALPGDVFAPCGLGDP*VSELLG
Trigger: GCCAAGAAGCTCCGAGACCAACGGATCGCCCAGCCC...ACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS TCA 90 bp TCTGGGCTGGGCGATCCGTTGGTCTCGGAGCTTCTTGGCTGTGGCTaGCCTCCAGCCTCAACCAGGCCCCCTGTACCTGTCCCTATGACT +
Preference number: 5 (lower is better)
Translates to: SGLGDPLVSELLGCG*PPASTRPPVPVPMT
Trigger: AGTCATAGGGACAGGTACAGGGGGCCTGGTTGAGGCTGGAGGTCAGCCACAGCCAAGAAGCTCCGAGACCAACGGATCGCCCAGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS TCA 90 bp GCTCCAAGGTGCCCTGGATCATGGTTCAGGGCTGCAATAGAGGCCTaGTGGCAGGCTGGCAGTGCATGCAGAGCACAGAGGCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: APRCPGSWFRAAIEA*WQAGSACRAQRPGL
Trigger: CAGCCCAGGCCTCTGTGCTCTGCATGCACTGCCAGCCTGCCATCAGGCCTCTATTGCAGCCCTGAACCATGATCCAGGGCACCTTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CAA 90 bp GAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGCGAGGTGCTCTCCAGGGCCACCAGCTaGAGCTGGGCTCGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: EKTHHGLCCASWTPCEVLSRATS*SWARAC
Trigger: GCAGGCCCGAGCCCAGCTCAAGCTGGTGGCCCTGGA...GAGCACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp AGGCAGAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTAAGGGCTGCAGCTCCTaGGCCTGGAACTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: RQKVPEARALPGDVFAPCKGCSS*AWNWAV
Trigger: GACTGCCCAGTTCCAGGCCAAGGAGCTGCAGCCCTT...ACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp CCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAAGTCCTTGTCTGTGGCAGATAGCTACGGGGTaGGTACCTGGGGAGGCCTTA +
Preference number: 5 (lower is better)
Translates to: PPPLSAQQSSSEPSPCLWQIATG*VPGEAL
Trigger: TAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTG...CCACAGACAAGGACTTGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp GAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTTTAGAGATCGGGGGTaGGCGAGAAGTGGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: ESPRGEGVAWGRFCSLSCFRDRG*ARSGVG
Trigger: GCCCACCCCACTTCTCGCCAACCCCCGATCTCTAAA...GCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS GCA 90 bp ATCACTGACCTTAGACTTCGGTTGCAGGGCCAGCTCAGCTCCTCCTaGCTGATGAGGTTGAGCCCCGAGGGCTGTGGACACCGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: ITDLRLRLQGQLSSS*LMRLSPEGCGHRFC
Trigger: GCAGAACCGGTGTCCACAGCCCTCGGGGCTCAACCTCATCAGGCAGGAGGAGCTGAGCTGGCCCTGCAACCGAAGTCTAAGGTCAGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CAA 90 bp CGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATAGGGACCTTAGACTTCGGTaGCAGGGCCAGCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RGRCLGTFLLPVLLTEHRDLRLR*QGQLSS
Trigger: GGAGCTGAGCTGGCCCTGCAACCGAAGTCTAAGGTC...CCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS GCA 90 bp AGGGGACCATCTGGCTCCAAGGTGCCCTGGATCATGGTTCAGGGCTaGAATAGAGGCCTGATGGCAGGCTGGCAGTGCATGCAGAGCACA +
Preference number: 5 (lower is better)
Translates to: RGPSGSKVPWIMVQG*NRGLMAGWQCMQST
Trigger: TGTGCTCTGCATGCACTGCCAGCCTGCCATCAGGCCTCTATTGCAGCCCTGAACCATGATCCAGGGCACCTTGGAGCCAGATGGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CAA 90 bp TGTGAATGTTTTCTACCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCACACTCTCCTGAGGCTTaGACCCGTCAGCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: CECFLPPPLSAQQSSSEPHSPEA*TRQLGQ
Trigger: CTGCCCCAGCTGACGGGTCAAAGCCTCAGGAGAGTG...TGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGGTAGAAAACATTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp AAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAAAGGGCTGCAGCTCCTaGGCCTGGAACTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: KKGPDRDIQAGGWSGAQSKGCSS*AWNWAV
Trigger: GACTGCCCAGTTCCAGGCCAAGGAGCTGCAGCCCTT...TGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp AGGCAGAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTCAGCGAGCCAAGTCCTaGTCTGTGGAGACGCATCAG +
Preference number: 5 (lower is better)
Translates to: RQKVPEARALPGDVFAPCQRAKS*SVETHQ
Trigger: CTGATGCGTCTCCACAGACAAGGACTTGGCTCGCTG...ACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp GAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGCGAGGTGCTCTGGTGGGGTCTCTGCTaGCACTCAGGCCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: EKTHHGLCCASWTPCEVLWWGLC*HSGLGV
Trigger: CACCCCCAGGCCTGAGTGCAAGCAGAGACCCCACCA...GAGCACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CAA 90 bp ATCCTGGACACCGTGCGAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTGGGCTGGGCGATCCGTaGGTCTCGGAGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: ILDTVRGAHSCDLVSHNSGLGDP*VSELLG
Trigger: GCCAAGAAGCTCCGAGACCAACGGATCGCCCAGCCC...AGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTCGCACGGTGTCCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp CAGAAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGCAGATAGCTACGGGGTaGGTACCTGGGGAGGCCTTA +
Preference number: 5 (lower is better)
Translates to: QKKGPDRDIQAGGWSGAQQIATG*VPGEAL
Trigger: TAAGGCCTCCCCAGGTACCAACCCCGTAGCTATCTG...CTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp TTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCCGGCTGCAGCCGGCTTaGCTTGCTCCGGGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: LGDRRPLSTFYRQGEREVRLQPA*LAPGAG
Trigger: CCCGGCCCCCGGAGCAAGCAAAGCCGGCTGCAGCCG...GACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CAA 90 bp AAAAAGGGCCCAGACAGGGACATCCAGGCTGGAGGTTGGAGTGGAGCACAGTCAGGGCTGGGGTTGAAGTaGGAGCTGAGGTTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KKGPDRDIQAGGWSGAQSGLGLK*ELRLEL
Trigger: CAGCTCCAACCTCAGCTCCAACTTCAACCCCAGCCC...TGACTGTGCTCCACTCCAACCTCCAGCCTGGATGTCCCTGTCTGGGCCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CAA 90 bp TGCCTGGGGACGTTTTTGCTCCCTGTCCTGCTGACAGAGCATAGGAAGTGTGAACACTCTCCTGAGGCTTaGACCCGTCAGCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: CLGTFLLPVLLTEHRKCEHSPEA*TRQLGQ
Trigger: CTGCCCCAGCTGACGGGTCAAAGCCTCAGGAGAGTG...TTCACACTTCCTATGCTCTGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp AAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTCCGATCCCAGCCCTCGGGACACTCCCTaGGGGCCTGTCTTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: KAEGESCPETRAGSSDPSPRDTP*GPVLPG
Trigger: CCCAGGCAAGACAGGCCCCAAGGGAGTGTCCCGAGG...GCTGGGATCGGAACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp ATCCTGGACACCGTGCGAGGTGCTCATAGCTGTGATCTTGTCTCCCACAACTCTCCAGAGGCGAGGGCGTaGCCTGGGGACGTTTTTGCT +
Preference number: 5 (lower is better)
Translates to: ILDTVRGAHSCDLVSHNSPEARA*PGDVFA
Trigger: AGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGG...AGAGTTGTGGGAGACAAGATCACAGCTATGAGCACCTCGCACGGTGTCCAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp AAAGCAGAAGGGGAAAGTTGTCCAGAAACAAGAGCAGGAAGTTCCGATCCCAGCGGGCTGGGGCTGGAGTaGCGGCTGCAGCTGGACTTG +
Preference number: 5 (lower is better)
Translates to: KAEGESCPETRAGSSDPSGLGLE*RLQLDL
Trigger: CAAGTCCAGCTGCAGCCGCAACTCCAGCCCCAGCCC...GCTGGGATCGGAACTTCCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CAA 90 bp AGGCAGAAAGTCCCAGAGGCGAGGGCGTTGCCTGGGGACGTTTTTGCTCCCTGTAGCAGAAGGGGAAAGTaGTCCAGAAACAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: RQKVPEARALPGDVFAPCSRRGK*SRNKSR
Trigger: CCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCT...ACAGGGAGCAAAAACGTCCCCAGGCAACGCCCTCGCCTCTGGGACTTTCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp GAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTGCGAGGTGCTCCAGCGAGCCAAGTCCTaGTCTGTGGAGACGCATCAG +
Preference number: 5 (lower is better)
Translates to: EKTHHGLCCASWTPCEVLQRAKS*SVETHQ
Trigger: CTGATGCGTCTCCACAGACAAGGACTTGGCTCGCTG...GAGCACCTCGCACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp AGAAAGAGGCTGAGGGAGTCTGGGCTTCAAAATAATCGACAACCTTTAAAGCAGTGCAGCCGGCTTTGCTaGCTCCGGGGGCCGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RKRLRESGLQNNRQPLKQCSRLC*LRGPGG
Trigger: CCCACCCGGCCCCCGGAGCAAGCAAAGCCGGCTGCA...CTGCTTTAAAGGTTGTCGATTATTTTGAAGCCCAGACTCCCTCAGCCTCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CAA 90 bp AGAAAGAGGCTGAGGGAGTCTGGGCTTCAAAATAATCGACAACCTTTAAAGCAGTCCAGGGCCACCAGCTaGAGCTGGGCTCGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: RKRLRESGLQNNRQPLKQSRATS*SWARAC
Trigger: GCAGGCCCGAGCCCAGCTCAAGCTGGTGGCCCTGGA...CTGCTTTAAAGGTTGTCGATTATTTTGAAGCCCAGACTCCCTCAGCCTCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp CTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAATTGGAGCAGACGGCCTaGGCACCGGAGCCACGGATG +
Preference number: 5 (lower is better)
Translates to: LLGDRRPLSTFYRQGERELEQTA*APEPRM
Trigger: CATCCGTGGCTCCGGTGCCAAGGCCGTCTGCTCCAA...TTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp AGCAAGCTGAGAGGGTCTGTAAGTAGGTACGGAATTGAGTCAGGAAACAGTCTGTGGTCTCGGAGCTTCTaGGCTGTGGCTGACCTCCAG +
Preference number: 5 (lower is better)
Translates to: SKLRGSVSRYGIESGNSLWSRSF*AVADLQ
Trigger: CTGGAGGTCAGCCACAGCCAAGAAGCTCCGAGACCA...CAGACTGTTTCCTGACTCAATTCCGTACCTACTTACAGACCCTCTCAGCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp AGCAAGCTGAGAGGGTCTGTAAGTAGGTACGGAATTGAGTCAGGAAACAGTCTGTTTAGAGATCGGGGGTaGGCGAGAAGTGGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: SKLRGSVSRYGIESGNSLFRDRG*ARSGVG
Trigger: GCCCACCCCACTTCTCGCCAACCCCCGATCTCTAAA...CAGACTGTTTCCTGACTCAATTCCGTACCTACTTACAGACCCTCTCAGCTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp TGTGAATGTTTTCTACCCCCTCCTCTCTCGGCTCAGCAGAGCTCCAGCGAGCCAAAAACGCATCATGGATaGTGCTGTGCATCCTGGACA +
Preference number: 5 (lower is better)
Translates to: CECFLPPPLSAQQSSSEPKTHHG*CCASWT
Trigger: TGTCCAGGATGCACAGCACAATCCATGATGCGTTTT...TGGCTCGCTGGAGCTCTGCTGAGCCGAGAGAGGAGGGGGTAGAAAACATTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp TGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCACGGTTCTGCCGCCTCTaGATCGTGCCCGGAGCCAAA +
Preference number: 5 (lower is better)
Translates to: WVTDVHCPHFIDKEKGKSRFCRL*IVPGAK
Trigger: TTTGGCTCCGGGCACGATCAAGAGGCGGCAGAACCG...TGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS-3UTR CAA 90 bp ACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCTTGGAGCAGACGGCCTaGGCACCGGAGCCACGGATG +
Preference number: 5 (lower is better)
Translates to: TDVHCPHFIDKEKGKSNVLEQTA*APEPRM
Trigger: CATCCGTGGCTCCGGTGCCAAGGCCGTCTGCTCCAA...GACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp GTGCGTAAGGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTAGCAGAAGGGGAAAGTaGTCCAGAAACAAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VRKGRKRIMDCAVHPGHRSRRGK*SRNKSR
Trigger: CCTGCTCTTGTTTCTGGACAACTTTCCCCTTCTGCT...ACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp CTTGAGAATCCACAGTGCCAAACAGACCCAGATAGCTACGGGGTTGGTACCTGGAAGGGTTCTAGGCCCTaGAGAATCCACAGTGCCAAA +
Preference number: 5 (lower is better)
Translates to: LENPQCQTDPDSYGVGTWKGSRP*RIHSAK
Trigger: TTTGGCACTGTGGATTCTCAAGGGCCTAGAACCCTT...CCAGGTACCAACCCCGTAGCTATCTGGGTCTGTTTGGCACTGTGGATTCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp GTGCGTAAGGGGAGAAAACGCATCATGGATTGTGCTGTGCATCCTGGACACCGTAAGGGTTCTAGGCCCTaGAGAATCCACAGTGCCAAA +
Preference number: 5 (lower is better)
Translates to: VRKGRKRIMDCAVHPGHRKGSRP*RIHSAK
Trigger: TTTGGCACTGTGGATTCTCAAGGGCCTAGAACCCTT...ACGGTGTCCAGGATGCACAGCACAATCCATGATGCGTTTTCTCCCCTTACGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp GTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCTCGTCCAGCAGCGAAGCAGCTTaGGTTCTCTGCCTGCCACTC +
Preference number: 5 (lower is better)
Translates to: VHCPHFIDKEKGKSNVSSSSEAA*VLCLPL
Trigger: GAGTGGCAGGCAGAGAACCAAAGCTGCTTCGCTGCT...GGACGAGACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp ACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCAGCAGCGAAGCAGCTTaGGTTCTCTGCCTGCCACTC +
Preference number: 5 (lower is better)
Translates to: TDVHCPHFIDKEKGKSNVSSEAA*VLCLPL
Trigger: GAGTGGCAGGCAGAGAACCAAAGCTGCTTCGCTGCT...GACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp ACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAGTCAAATGTCTGCCTGGGGACGTTTTaGCTCCCTGTCCTGCTGACA +
Preference number: 5 (lower is better)
Translates to: TDVHCPHFIDKEKGKSNVCLGTF*LPVLLT
Trigger: TGTCAGCAGGACAGGGAGCAAAAACGTCCCCAGGCA...GACATTTGACTTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS-3UTR CAA 90 bp CTCTTGGGTGACAGACGTCCACTGTCCACATTTTATAGACAAGGAGAAAGGGAAAAAACGCATCATGGATaGTGCTGTGCATCCTGGACA +
Preference number: 5 (lower is better)
Translates to: LLGDRRPLSTFYRQGEREKTHHG*CCASWT
Trigger: TGTCCAGGATGCACAGCACAATCCATGATGCGTTTT...TTCCCTTTCTCCTTGTCTATAAAATGTGGACAGTGGACGTCTGTCACCCAAGAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS GCA 72 bp GGCGCGCGGCTGTGGCCGGCTGCAGCCGGCTTTGCTTaGTCCGGGGGCCGGGTGGGCCCCAGGTCAGCGGCA +
Preference number: 6 (lower is better)
Translates to: GARLWPAAAGFA*SGGRVGPRSAA
Trigger: TGCCGCTGACCTGGGGCCCACCCGGCCCCCGGAGCAAGCAAAGCCGGCTGCAGCCGGCCACAGCCGCGCGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS GCA 72 bp GGAGGGCGCGCGGCTGTGGCCGGCTGCAGCCGGCTTTaGTTGCTCCGGGGGCCGGGTGGGCCCCAGGTCAGC +
Preference number: 6 (lower is better)
Translates to: GGRAAVAGCSRL*LLRGPGGPQVS
Trigger: GCTGACCTGGGGCCCACCCGGCCCCCGGAGCAAGCAAAGCCGGCTGCAGCCGGCCACAGCCGCGCGCCCTCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS GCA 72 bp CTCACGGCTCCGGGAGGGCGCGCGGCTGTGGCCGGCTaGAGCCGGCTTTGCTTGCTCCGGGGGCCGGGTGGG +
Preference number: 6 (lower is better)
Translates to: LTAPGGRAAVAG*SRLCLLRGPGG
Trigger: CCCACCCGGCCCCCGGAGCAAGCAAAGCCGGCTGCAGCCGGCCACAGCCGCGCGCCCTCCCGGAGCCGTGAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CAA 72 bp GGGAGGGCGCGCGGCTGTGGCCGGCTGCAGCCGGCTTaGCTTGCTCCGGGGGCCGGGTGGGCCCCAGGTCAG +
Preference number: 6 (lower is better)
Translates to: GRARGCGRLQPA*LAPGAGWAPGQ
Trigger: CTGACCTGGGGCCCACCCGGCCCCCGGAGCAAGCAAAGCCGGCTGCAGCCGGCCACAGCCGCGCGCCCTCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS TCA 72 bp GCCCCGCGGGGCCTGCGGCCTGGCGAGAGGACGCCCTaGCACCACCTGTCTCCGCCTCCGCTTCGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: APRGLRPGERTP*HHLSPPPLRCQ
Trigger: CTGGCAGCGAAGCGGAGGCGGAGACAGGTGGTGTCAGGGCGTCCTCTCGCCAGGCCGCAGGCCCCGCGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CCA 72 bp TGCCTCTCTGCGGGCCTCCTCGACAGCCGTCTTGAGTaGAAGCCGGGCCATGGCGGCCAGGCCCCCGCCCGG +
Preference number: 6 (lower is better)
Translates to: CLSAGLLDSRLE*KPGHGGQAPAR
Trigger: CCGGGCGGGGGCCTGGCCGCCATGGCCCGGCTTCCACTCAAGACGGCTGTCGAGGAGGCCCGCAGAGAGGCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CCA 72 bp GGGCCAGTGTCCTGTTGCCCCGCGGGGCCTGCGGCCTaGCGAGAGGACGCCCTGACACCACCTGTCTCCGCC +
Preference number: 6 (lower is better)
Translates to: GPVSCCPAGPAA*REDALTPPVSA
Trigger: GGCGGAGACAGGTGGTGTCAGGGCGTCCTCTCGCCAGGCCGCAGGCCCCGCGGGGCAACAGGACACTGGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS TCA 72 bp CTGCTCCAGCCACCCTTGGCCCCAGAGCCTTCCGTCTaGGACCCAGGCTGCAGGGCGCGGGGAGCGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LLQPPLAPEPSV*DPGCRARGAGS
Trigger: GCTGCCCGCTCCCCGCGCCCTGCAGCCTGGGTCTCAGACGGAAGGCTCTGGGGCCAAGGGTGGCTGGAGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS GCA 72 bp GCAGGCCACAGCCTCGTGGGCCACAGGGAAGGTGCCTaGGGGGAGTGGCGCGCGTGGGGTCCAGGCGTCTGT +
Preference number: 6 (lower is better)
Translates to: AGHSLVGHREGA*GEWRAWGPGVC
Trigger: ACAGACGCCTGGACCCCACGCGCGCCACTCCCCGCAGGCACCTTCCCTGTGGCCCACGAGGCTGTGGCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS CCA 72 bp TGTCAGCCCCGGCCTCGCCGGCATCGTAGGCCCCTGTaGCACCCGGCCCTTGGGACGAGAGTGGGCGACCTT +
Preference number: 6 (lower is better)
Translates to: CQPRPRRHRRPL*HPALGTRVGDL
Trigger: AAGGTCGCCCACTCTCGTCCCAAGGGCCGGGTGCCACAGGGGCCTACGATGCCGGCGAGGCCGGGGCTGACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS TCA 72 bp CTAATGCCTCTCTGCGGGCCTCCTCGACAGCCGTCTTaGGTGGAAGCCGGGCCATGGCGGCCAGGCCCCCGC +
Preference number: 6 (lower is better)
Translates to: LMPLCGPPRQPS*VEAGPWRPGPR
Trigger: GCGGGGGCCTGGCCGCCATGGCCCGGCTTCCACTCAAGACGGCTGTCGAGGAGGCCCGCAGAGAGGCATTAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS GCA 72 bp TGGGCTGAGGCACCGGCCAGCGCCTGCCCCAAGGGCTaGCCAGTTAAGGTGGACCAGTCCTCCAGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: WAEAPASACPKG*PVKVDQSSRAW
Trigger: CCAGGCCCTGGAGGACTGGTCCACCTTAACTGGGCAGCCCTTGGGGCAGGCGCTGGCCGGTGCCTCAGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CAA 72 bp CTCGCCGGCATCGTAGGCCCCTGTGGCACCCGGCCCTaGGGACGAGAGTGGGCGACCTTGAGGCGGACTCTC +
Preference number: 6 (lower is better)
Translates to: LAGIVGPCGTRP*GREWATLRRTL
Trigger: GAGAGTCCGCCTCAAGGTCGCCCACTCTCGTCCCAAGGGCCGGGTGCCACAGGGGCCTACGATGCCGGCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS TCA 72 bp GTGGCACCCGGCCCTTGGGACGAGAGTGGGCGACCTTaGGGCGGACTCTCTAGCCAGGGGCGCGTGGAGTCT +
Preference number: 6 (lower is better)
Translates to: VAPGPWDESGRP*GGLSSQGRVES
Trigger: AGACTCCACGCGCCCCTGGCTAGAGAGTCCGCCTCAAGGTCGCCCACTCTCGTCCCAAGGGCCGGGTGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS GCA 72 bp AGCACAGAGGCCTGGGCTGAGGCACCGGCCAGCGCCTaGCCCAAGGGCTGCCCAGTTAAGGTGGACCAGTCC +
Preference number: 6 (lower is better)
Translates to: STEAWAEAPASA*PKGCPVKVDQS
Trigger: GGACTGGTCCACCTTAACTGGGCAGCCCTTGGGGCAGGCGCTGGCCGGTGCCTCAGCCCAGGCCTCTGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CCA 72 bp AGGGGCCGTGTCTGTCCTCAGAGTGTGTGGAAGTGCTaGGACCCACGGGGCTCCCGGGAACCGCCCTCGGGA +
Preference number: 6 (lower is better)
Translates to: RGRVCPQSVWKC*DPRGSREPPSG
Trigger: TCCCGAGGGCGGTTCCCGGGAGCCCCGTGGGTCCCAGCACTTCCACACACTCTGAGGACAGACACGGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS GCA 72 bp CCTCCTGCTCCGAGCTCGGGGCGATTTCGCACCTGCTaGGTTTCCGTAGCTGGGGTACCGGCTGTGAGCGCC +
Preference number: 6 (lower is better)
Translates to: PPAPSSGRFRTC*VSVAGVPAVSA
Trigger: GGCGCTCACAGCCGGTACCCCAGCTACGGAAACGCAGCAGGTGCGAAATCGCCCCGAGCTCGGAGCAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS GCA 72 bp CTCTGCAGAAACACCATGAGCTTCCGGGCCTCCTCCTaGTTTTCCGTGAGCGCCCCGCTGCGGCCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: LCRNTMSFRASS*FSVSAPLRPAG
Trigger: CCCTGCCGGCCGCAGCGGGGCGCTCACGGAAAAGCAGGAGGAGGCCCGGAAGCTCATGGTGTTTCTGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS GCA 72 bp CGCCAGGTGTTCTCCCGGGGGTTGAACACATGCAGGTaGGCAGGTAGAGGCAGGGACACAGGGGCCGCCGCA +
Preference number: 6 (lower is better)
Translates to: RQVFSRGLNTCR*AGRGRDTGAAA
Trigger: TGCGGCGGCCCCTGTGTCCCTGCCTCTACCTGCGCACCTGCATGTGTTCAACCCCCGGGAGAACACCTGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS TCA 72 bp GCCCCGAGGGCTGTGGACACCGGTTCTGCCGCCTCTTaGTCGTGCCCGGAGCCAAACCAGTGTAAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: APRAVDTGSAAS*SCPEPNQCKAS
Trigger: GCTGGCCTTACACTGGTTTGGCTCCGGGCACGATCAAGAGGCGGCAGAACCGGTGTCCACAGCCCTCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CCA 72 bp GTCTGGGCTGGGCGATCCGTTGGTCTCGGAGCTTCTTaGCTGTGGCTGACCTCCAGCCTCAACCAGGCCCCC +
Preference number: 6 (lower is better)
Translates to: VWAGRSVGLGAS*LWLTSSLNQAP
Trigger: GGGGGCCTGGTTGAGGCTGGAGGTCAGCCACAGCCAAGAAGCTCCGAGACCAACGGATCGCCCAGCCCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS CCA 72 bp CTCGGGGCGATTTCGCACCTGCTGCGTTTCCGTAGCTaGGGTACCGGCTGTGAGCGCCTCGCAGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: LGAISHLLRFRS*GTGCERLAEEE
Trigger: CTCCTCCTCTGCGAGGCGCTCACAGCCGGTACCCCAGCTACGGAAACGCAGCAGGTGCGAAATCGCCCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS CCA 72 bp CTCCTCCTGCCTGATGAGGTTGAGCCCCGAGGGCTGTaGACACCGGTTCTGCCGCCTCTTGATCGTGCCCGG +
Preference number: 6 (lower is better)
Translates to: LLLPDEVEPRGL*TPVLPPLDRAR
Trigger: CCGGGCACGATCAAGAGGCGGCAGAACCGGTGTCCACAGCCCTCGGGGCTCAACCTCATCAGGCAGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS GCA 72 bp CGTTGGAGCAGACGGCCTTGGCACCGGAGCCACGGATaGCCCCCGCCAGAAACAGGTAGTTGTGCATGGTGC +
Preference number: 6 (lower is better)
Translates to: RWSRRPWHRSHG*PPPETGSCAWC
Trigger: GCACCATGCACAACTACCTGTTTCTGGCGGGGGGCATCCGTGGCTCCGGTGCCAAGGCCGTCTGCTCCAACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS CCA 72 bp TTAGGCCTGGGGGAGGGTCTGGGCTGGGCGATCCGTTaGTCTCGGAGCTTCTTGGCTGTGGCTGACCTCCAG +
Preference number: 6 (lower is better)
Translates to: LGLGEGLGWAIR*SRSFLAVADLQ
Trigger: CTGGAGGTCAGCCACAGCCAAGAAGCTCCGAGACCAACGGATCGCCCAGCCCAGACCCTCCCCCAGGCCTAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS TCA 72 bp GGCGATCCGTTGGTCTCGGAGCTTCTTGGCTGTGGCTaGCCTCCAGCCTCAACCAGGCCCCCTGTACCTGTC +
Preference number: 6 (lower is better)
Translates to: GDPLVSELLGCG*PPASTRPPVPV
Trigger: GACAGGTACAGGGGGCCTGGTTGAGGCTGGAGGTCAGCCACAGCCAAGAAGCTCCGAGACCAACGGATCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS GCA 72 bp ATGAGGTTGAGCCCCGAGGGCTGTGGACACCGGTTCTaGCGCCTCTTGATCGTGCCCGGAGCCAAACCAGTG +
Preference number: 6 (lower is better)
Translates to: MRLSPEGCGHRF*RLLIVPGAKPV
Trigger: CACTGGTTTGGCTCCGGGCACGATCAAGAGGCGGCAGAACCGGTGTCCACAGCCCTCGGGGCTCAACCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CCA 72 bp CCCCCAGTGCCACGATGTCGCTGGAACGCCGGTGGCTaGCACTGTATGGGCACTCGTCCCAAGCATCCTTCA +
Preference number: 6 (lower is better)
Translates to: PPVPRCRWNAGG*HCMGTRPKHPS
Trigger: TGAAGGATGCTTGGGACGAGTGCCCATACAGTGCCAGCCACCGGCGTTCCAGCGACATCGTGGCACTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS CAA 90 bp AGACTTCGGTTGCAGGGCCAGCTCAGCTCCTCCTGCCTGATGAGGTaGAGCCCCGAGGGCTGTGGACACCGGTTCTGCCGCCTCTTGATC +
Preference number: 6 (lower is better)
Translates to: RLRLQGQLSSSCLMR*SPEGCGHRFCRLLI
Trigger: GATCAAGAGGCGGCAGAACCGGTGTCCACAGCCCTCGGGGCTCAACCTCATCAGGCAGGAGGAGCTGAGCTGGCCCTGCAACCGAAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CCA 72 bp CACGATGTCGCTGGAACGCCGGTGGCTGGCACTGTATaGGCACTCGTCCCAAGCATCCTTCACGGGGCTGTA +
Preference number: 6 (lower is better)
Translates to: HDVAGTPVAGTV*ALVPSILHGAV
Trigger: TACAGCCCCGTGAAGGATGCTTGGGACGAGTGCCCATACAGTGCCAGCCACCGGCGTTCCAGCGACATCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS TCA 72 bp CTCCTCGTAGGCCCCAGGGTCCTCAGGCAGCGTTCCTaGGCTCTGTGCTGTCATCACAGCCAACCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: LLVGPRVLRQRS*ALCCHHSQPAS
Trigger: AGAAGCAGGTTGGCTGTGATGACAGCACAGAGCTCAGGAACGCTGCCTGAGGACCCTGGGGCCTACGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CCA 72 bp CTGCTTGCACTCAGGCCTGGGGGTGTCAGTAGGGCCTaGCTGCAGATATCAGGAGACAGCGAGGCTTATGGC +
Preference number: 6 (lower is better)
Translates to: LLALRPGGVSRA*LQISGDSEAYG
Trigger: GCCATAAGCCTCGCTGTCTCCTGATATCTGCAGCCAGGCCCTACTGACACCCCCAGGCCTGAGTGCAAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CAA 72 bp CCCAGGAGGGTCTCCCTGGAGAGCAGCGAAGCAGCTTaGGTTCTCTGCCTGCCACTCAGAGTGAGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: PRRVSLESSEAA*VLCLPLRVRSA
Trigger: TGCAGACCTCACTCTGAGTGGCAGGCAGAGAACCAAAGCTGCTTCGCTGCTCTCCAGGGAGACCCTCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3
CDS GCA 72 bp TCTGGCTCCAAGGTGCCCTGGATCATGGTTCAGGGCTaGAATAGAGGCCTGATGGCAGGCTGGCAGTGCATG +
Preference number: 6 (lower is better)
Translates to: SGSKVPWIMVQG*NRGLMAGWQCM
Trigger: CATGCACTGCCAGCCTGCCATCAGGCCTCTATTGCAGCCCTGAACCATGATCCAGGGCACCTTGGAGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648057.3
CDS CCA 72 bp AGATGTTGGTCAGAGGGTTGTAGCAGAAGACCTCGTTaGAGCAGACGGCCTTGGCACCGGAGCCACGGATGC +
Preference number: 6 (lower is better)
Translates to: RCWSEGCSRRPR*SRRPWHRSHGC
Trigger: GCATCCGTGGCTCCGGTGCCAAGGCCGTCTGCTCCAACGAGGTCTTCTGCTACAACCCTCTGACCAACATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395676.4
ENST00000648057.3