Pregenerated sensors for KLF4 (Homo sapiens)
Ensembl gene IDs: ENSG00000136826Ensembl transcript IDs: ENST00000374672.5, ENST00000411706.1, ENST00000420475.1, ENST00000493306.1, ENST00000497048.5, ENST00000610832.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGTGGCCGGGGCGGTGGGCGGGCGGTGCCGCCAGGTGAGACTGGCTaGCGTGGCGCGGAGCTGCGAACTGGTCGGCGGCGCAAGGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: CGRGGGRAVPPGETG*RGAELRTGRRRKAR Trigger: CCGCGCCTTGCGCCGCCGACCAGTTCGCAGCTCCGCGCCACGGCAGCCAGTCTCACCTGGCGGCACCGCCCGCCCACCGCCCCGGCCACA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374672.5 ENST00000610832.1 |
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| CDS TCA 90 bp | GCGCGGAGCTGCGAACTGGTCGGCGGCGCAAGGCGCGGACTCCGGTaGGTTGTGTGGAGCGCGCGCGGCCATGGGCGCGGGCCACGGGCG | + |
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Preference number: 5 (lower is better) Translates to: ARSCELVGGARRGLR*VVWSARGHGRGPRA Trigger: CGCCCGTGGCCCGCGCCCATGGCCGCGCGCGCTCCACACAACTCACCGGAGTCCGCGCCTTGCGCCGCCGACCAGTTCGCAGCTCCGCGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374672.5 ENST00000610832.1 |
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| CDS TCA 90 bp | CGCCCGGCGCCACGCCCGGGTCGTTCCCGGCCCGGATCGGATAGGTaGAGCTGCAGGTGGAGGGCGCGCTGGCAGGGCCGCTGCTCGACG | + |
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Preference number: 5 (lower is better) Translates to: RPAPRPGRSRPGSDR*SCRWRARWQGRCST Trigger: CGTCGAGCAGCGGCCCTGCCAGCGCGCCCTCCACCTGCAGCTTCACCTATCCGATCCGGGCCGGGAACGACCCGGGCGTGGCGCCGGGCG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000374672.5 ENST00000411706.1 ENST00000493306.1 ENST00000497048.5 |
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| CDS GCA 90 bp | GGTCACTCGGCGGCTCCCGGTGCCGCCGCCGCCCGCCACCGCCTCTaGTCCCCGCGCGCCCGCAGACACGTTCGTTCTCTCTGGTCGGGA | + |
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Preference number: 5 (lower is better) Translates to: GHSAAPGAAAARHRL*SPRARRHVRSLWSG Trigger: TCCCGACCAGAGAGAACGAACGTGTCTGCGGGCGCGCGGGGAGCAGAGGCGGTGGCGGGCGGCGGCGGCACCGGGAGCCGCCGAGTGACC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374672.5 ENST00000610832.1 |
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| CDS GCA 90 bp | TGTGGCCGGGGCGGTGGGCGGGCGGTGCCGCCAGGTGAGACTGGCTaGCGTGGCGCGGAGCTGCGAACGCCATTGTCGGCTCCCTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: CGRGGGRAVPPGETG*RGAELRTPLSAPWV Trigger: AACCCAGGGAGCCGACAATGGCGTTCGCAGCTCCGCGCCACGGCAGCCAGTCTCACCTGGCGGCACCGCCCGCCCACCGCCCCGGCCACA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420475.1 |
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| CDS CCA 90 bp | CGTGCTGGCGGGCCACGCGCGACTGCACCGCCCAGACATGGGGACTaGTCAGGCAGGAAGCACCCGGGAACCCAGGGCGCCAGCGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: RAGGPRATAPPRHGD*SGRKHPGTQGASAA Trigger: TGCAGCGCTGGCGCCCTGGGTTCCCGGGTGCTTCCTGCCTGACCAGTCCCCATGTCTGGGCGGTGCAGTCGCGCGTGGCCCGCCAGCACG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS TCA 90 bp | GGGGTCCAGCGCCCAAGTGGGTGCACGAAGAGACCGCCTCCTGCTTaGTCTTGGGGCACGTGCGCGGCGGCCCGCCGTTGTAGGGCGCCA | + |
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Preference number: 5 (lower is better) Translates to: GVQRPSGCTKRPPPA*SWGTCAAARRCRAP Trigger: TGGCGCCCTACAACGGCGGGCCGCCGCGCACGTGCCCCAAGATCAAGCAGGAGGCGGTCTCTTCGTGCACCCACTTGGGCGCTGGACCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000374672.5 ENST00000493306.1 ENST00000497048.5 |
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| CDS CCA 90 bp | TGGCGGCTGCGGCTGCTGCGGCGGAATGTACACCGGGTCCAATTCTaGCCGCAGGAGCTCGGCCACGAAGCCGCCCGAGGGGCTCACGTC | + |
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Preference number: 5 (lower is better) Translates to: WRLRLLRRNVHRVQF*PQELGHEAARGAHV Trigger: GACGTGAGCCCCTCGGGCGGCTTCGTGGCCGAGCTCCTGCGGCCAGAATTGGACCCGGTGTACATTCCGCCGCAGCAGCCGCAGCCGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000374672.5 ENST00000411706.1 ENST00000493306.1 ENST00000497048.5 |
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| CDS GCA 90 bp | CGGGCGGCACGGTCACGCGTCCGCACCCCTGCTAGCATACGCGCTTaGCGCGCTGTCTGCGCGCTGGAGAAGAGCGCGATTATCCGCGTG | + |
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Preference number: 5 (lower is better) Translates to: RAARSRVRTPASIRA*RAVCALEKSAIIRV Trigger: CACGCGGATAATCGCGCTCTTCTCCAGCGCGCAGACAGCGCGGCAAGCGCGTATGCTAGCAGGGGTGCGGACGCGTGACCGTGCCGCCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420475.1 |
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| CDS CCA 90 bp | ATACTGACGTGCTGGCGGGCCACGCGCGACTGCACCGCCCAGACATaGGGACTGGTCAGGCAGGAAGCACCCGGGAACCCAGGGCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: ILTCWRATRDCTAQT*GLVRQEAPGNPGRQ Trigger: CTGGCGCCCTGGGTTCCCGGGTGCTTCCTGCCTGACCAGTCCCCATGTCTGGGCGGTGCAGTCGCGCGTGGCCCGCCAGCACGTCAGTAT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS CCA 90 bp | TCCCGCCAGCGCTGCGGGGACAGGGCGGGAGAGACCTGTCAGTGGTaGTCCCCTGTTGCCACCCGACATACTGACGTGCTGGCGGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: SRQRCGDRAGETCQW*SPVATRHTDVLAGH Trigger: GTGGCCCGCCAGCACGTCAGTATGTCGGGTGGCAACAGGGGACCACCACTGACAGGTCTCTCCCGCCCTGTCCCCGCAGCGCTGGCGGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS CCA 90 bp | TCCTCCCGCCAGCGCTGCGGGGACAGGGCGGGAGAGACCTGTCAGTaGTGGTCCCCTGTTGCCACCCGACATACTGACGTGCTGGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: SSRQRCGDRAGETCQ*WSPVATRHTDVLAG Trigger: GCCCGCCAGCACGTCAGTATGTCGGGTGGCAACAGGGGACCACCACTGACAGGTCTCTCCCGCCCTGTCCCCGCAGCGCTGGCGGGAGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS TCA 90 bp | GGGAGAGACCTGTCAGTGGTGGTCCCCTGTTGCCACCCGACATACTaGCGTGCTGGCGGGCCACGCGCGACTGCACCGCCCAGACATGGG | + |
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Preference number: 5 (lower is better) Translates to: GRDLSVVVPCCHPTY*RAGGPRATAPPRHG Trigger: CCCATGTCTGGGCGGTGCAGTCGCGCGTGGCCCGCCAGCACGTCAGTATGTCGGGTGGCAACAGGGGACCACCACTGACAGGTCTCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS CCA 90 bp | GCAGCCGGCCGGTGGCCATTGCTGAGAGGGGGTCCAGCGCCCAAGTaGGTGCACGAAGAGACCGCCTCCTGCTTGATCTTGGGGCACGTG | + |
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Preference number: 5 (lower is better) Translates to: AAGRWPLLRGGPAPK*VHEETASCLILGHV Trigger: CACGTGCCCCAAGATCAAGCAGGAGGCGGTCTCTTCGTGCACCCACTTGGGCGCTGGACCCCCTCTCAGCAATGGCCACCGGCCGGCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000374672.5 ENST00000493306.1 ENST00000497048.5 |
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| CDS CCA 90 bp | CCTGTCAGTGGTGGTCCCCTGTTGCCACCCGACATACTGACGTGCTaGCGGGCCACGCGCGACTGCACCGCCCAGACATGGGGACTGGTC | + |
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Preference number: 5 (lower is better) Translates to: PVSGGPLLPPDILTC*RATRDCTAQTWGLV Trigger: GACCAGTCCCCATGTCTGGGCGGTGCAGTCGCGCGTGGCCCGCCAGCACGTCAGTATGTCGGGTGGCAACAGGGGACCACCACTGACAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS GCA 90 bp | TTCAGCACGAACTTGCCCATCAGCCCGCCACCTGGCGGCTGCGGCTaGTGCGGCGGAATGTACACCGGGTCCAATTCTGGCCGCAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: FSTNLPISPPPGGCG*CGGMYTGSNSGRRS Trigger: GCTCCTGCGGCCAGAATTGGACCCGGTGTACATTCCGCCGCAGCAGCCGCAGCCGCCAGGTGGCGGGCTGATGGGCAAGTTCGTGCTGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000374672.5 ENST00000411706.1 ENST00000493306.1 ENST00000497048.5 |
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| CDS GCA 90 bp | AGACCTGTCAGTGGTGGTCCCCTGTTGCCACCCGACATACTGACGTaGTGGCGGGCCACGCGCGACTGCACCGCCCAGACATGGGGACTG | + |
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Preference number: 5 (lower is better) Translates to: RPVSGGPLLPPDILT*WRATRDCTAQTWGL Trigger: CAGTCCCCATGTCTGGGCGGTGCAGTCGCGCGTGGCCCGCCAGCACGTCAGTATGTCGGGTGGCAACAGGGGACCACCACTGACAGGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS GCA 90 bp | TCACGCGTCCGCACCCCTGCTAGCATACGCGCTTGCCGCGCTGTCTaGGCGCTGGAGAAGAGCGCGATTATCCGCGTGACTCATCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: SRVRTPASIRACRAV*ALEKSAIIRVTHPA Trigger: GGCTGGATGAGTCACGCGGATAATCGCGCTCTTCTCCAGCGCGCAGACAGCGCGGCAAGCGCGTATGCTAGCAGGGGTGCGGACGCGTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420475.1 |
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| CDS GCA 72 bp | GCGGCTCCCGGTGCCGCCGCCGCCCGCCACCGCCTCTaGTCCCCGCGCGCCCGCAGACACGTTCGTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: AAPGAAAARHRL*SPRARRHVRSL Trigger: GAGAGAACGAACGTGTCTGCGGGCGCGCGGGGAGCAGAGGCGGTGGCGGGCGGCGGCGGCACCGGGAGCCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374672.5 ENST00000610832.1 |
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| CDS CAA 90 bp | GGAGCTGCGAACTGGTCGGCGGCGCAAGGCGCGGACTCCGGTGAGTaGTGTGGAGCGCGCGCGGCCATGGGCGCGGGCCACGGGCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: GAANWSAAQGADSGE*CGARAAMGAGHGRV Trigger: CACCCGCCCGTGGCCCGCGCCCATGGCCGCGCGCGCTCCACACAACTCACCGGAGTCCGCGCCTTGCGCCGCCGACCAGTTCGCAGCTCC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374672.5 ENST00000610832.1 |
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| CDS TCA 72 bp | TGCGAACTGGTCGGCGGCGCAAGGCGCGGACTCCGGTaGGTTGTGTGGAGCGCGCGCGGCCATGGGCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: CELVGGARRGLR*VVWSARGHGRG Trigger: CCCGCGCCCATGGCCGCGCGCGCTCCACACAACTCACCGGAGTCCGCGCCTTGCGCCGCCGACCAGTTCGCA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374672.5 ENST00000610832.1 |
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| CDS TCA 72 bp | CCACGCCCGGGTCGTTCCCGGCCCGGATCGGATAGGTaGAGCTGCAGGTGGAGGGCGCGCTGGCAGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: PRPGRSRPGSDR*SCRWRARWQGR Trigger: GCGGCCCTGCCAGCGCGCCCTCCACCTGCAGCTTCACCTATCCGATCCGGGCCGGGAACGACCCGGGCGTGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000374672.5 ENST00000411706.1 ENST00000493306.1 ENST00000497048.5 |
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| CDS GCA 72 bp | TGCCGCCAGGTGAGACTGGCTGCCGTGGCGCGGAGCTaGGAACTGGTCGGCGGCGCAAGGCGCGGACTCCGG | + |
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Preference number: 6 (lower is better) Translates to: CRQVRLAAVARS*ELVGGARRGLR Trigger: CCGGAGTCCGCGCCTTGCGCCGCCGACCAGTTCGCAGCTCCGCGCCACGGCAGCCAGTCTCACCTGGCGGCA 75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374672.5 ENST00000610832.1 |
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| CDS CAA 72 bp | AACTGGTCGGCGGCGCAAGGCGCGGACTCCGGTGAGTaGTGTGGAGCGCGCGCGGCCATGGGCGCGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: NWSAAQGADSGE*CGARAAMGAGH Trigger: GTGGCCCGCGCCCATGGCCGCGCGCGCTCCACACAACTCACCGGAGTCCGCGCCTTGCGCCGCCGACCAGTT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374672.5 ENST00000610832.1 |
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| CDS CCA 72 bp | GGGCCACGCGCGACTGCACCGCCCAGACATGGGGACTaGTCAGGCAGGAAGCACCCGGGAACCCAGGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: GPRATAPPRHGD*SGRKHPGTQGA Trigger: GGCGCCCTGGGTTCCCGGGTGCTTCCTGCCTGACCAGTCCCCATGTCTGGGCGGTGCAGTCGCGCGTGGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS GCA 72 bp | CCAGCGCCCAAGTGGGTGCACGAAGAGACCGCCTCCTaGTTGATCTTGGGGCACGTGCGCGGCGGCCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: PAPKWVHEETAS*LILGHVRGGPP Trigger: CGGCGGGCCGCCGCGCACGTGCCCCAAGATCAAGCAGGAGGCGGTCTCTTCGTGCACCCACTTGGGCGCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000374672.5 ENST00000493306.1 ENST00000497048.5 |
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| CDS CCA 72 bp | CGGCTGCTGCGGCGGAATGTACACCGGGTCCAATTCTaGCCGCAGGAGCTCGGCCACGAAGCCGCCCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: RLLRRNVHRVQF*PQELGHEAARG Trigger: CCCTCGGGCGGCTTCGTGGCCGAGCTCCTGCGGCCAGAATTGGACCCGGTGTACATTCCGCCGCAGCAGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000374672.5 ENST00000411706.1 ENST00000493306.1 ENST00000497048.5 |
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| CDS CAA 72 bp | CCGCCCGAGGGGCTCACGTCGTTGATGTCCGCCAGGTaGAAGGGAGCCGTCGGAGGGGGAGCGGACTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: PPEGLTSLMSAR*KGAVGGGADSL Trigger: CAGGGAGTCCGCTCCCCCTCCGACGGCTCCCTTCAACCTGGCGGACATCAACGACGTGAGCCCCTCGGGCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000374672.5 ENST00000411706.1 ENST00000493306.1 ENST00000497048.5 |
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| CDS CAA 72 bp | GCGCCCAAGTGGGTGCACGAAGAGACCGCCTCCTGCTaGATCTTGGGGCACGTGCGCGGCGGCCCGCCGTTG | + |
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Preference number: 6 (lower is better) Translates to: APKWVHEETASC*ILGHVRGGPPL Trigger: CAACGGCGGGCCGCCGCGCACGTGCCCCAAGATCAAGCAGGAGGCGGTCTCTTCGTGCACCCACTTGGGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000374672.5 ENST00000493306.1 ENST00000497048.5 |
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| CDS CAA 90 bp | GCTGCGGGGACAGGGCGGGAGAGACCTGTCAGTGGTGGTCCCCTGTaGCCACCCGACATACTGACGTGCTGGCGGGCCACGCGCGACTGC | + |
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Preference number: 6 (lower is better) Translates to: AAGTGRERPVSGGPL*PPDILTCWRATRDC Trigger: GCAGTCGCGCGTGGCCCGCCAGCACGTCAGTATGTCGGGTGGCAACAGGGGACCACCACTGACAGGTCTCTCCCGCCCTGTCCCCGCAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS TCA 72 bp | CGCCCAAGTGGGTGCACGAAGAGACCGCCTCCTGCTTaGTCTTGGGGCACGTGCGCGGCGGCCCGCCGTTGT | + |
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Preference number: 6 (lower is better) Translates to: RPSGCTKRPPPA*SWGTCAAARRC Trigger: ACAACGGCGGGCCGCCGCGCACGTGCCCCAAGATCAAGCAGGAGGCGGTCTCTTCGTGCACCCACTTGGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000374672.5 ENST00000493306.1 ENST00000497048.5 |
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| CDS TCA 72 bp | GGGGGAAGTCGTGTGCAGCCGGCCGGTGGCCATTGCTaGGAGGGGGTCCAGCGCCCAAGTGGGTGCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: GGSRVQPAGGHC*EGVQRPSGCTK Trigger: CTTCGTGCACCCACTTGGGCGCTGGACCCCCTCTCAGCAATGGCCACCGGCCGGCTGCACACGACTTCCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000374672.5 ENST00000493306.1 ENST00000497048.5 |
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| CDS TCA 72 bp | CTGTCAGTGGTGGTCCCCTGTTGCCACCCGACATACTaGCGTGCTGGCGGGCCACGCGCGACTGCACCGCCC | + |
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Preference number: 6 (lower is better) Translates to: LSVVVPCCHPTY*RAGGPRATAPP Trigger: GGGCGGTGCAGTCGCGCGTGGCCCGCCAGCACGTCAGTATGTCGGGTGGCAACAGGGGACCACCACTGACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS CCA 72 bp | CGTGGCGCGGAGCTGCGAACGCCATTGTCGGCTCCCTaGGTTCGAAGCCCGCGAAGACTGGTGGGGTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RGAELRTPLSAP*VRSPRRLVGSA Trigger: CGCTGACCCCACCAGTCTTCGCGGGCTTCGAACCCAGGGAGCCGACAATGGCGTTCGCAGCTCCGCGCCACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420475.1 |
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| CDS CCA 72 bp | GGTGGTCCCCTGTTGCCACCCGACATACTGACGTGCTaGCGGGCCACGCGCGACTGCACCGCCCAGACATGG | + |
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Preference number: 6 (lower is better) Translates to: GGPLLPPDILTC*RATRDCTAQTW Trigger: CCATGTCTGGGCGGTGCAGTCGCGCGTGGCCCGCCAGCACGTCAGTATGTCGGGTGGCAACAGGGGACCACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS GCA 72 bp | GGAGAGCTCCTCCCGCCAGCGGTTATTCGGGGCACCTaGTTGACGCAGTGTCTTCTCCCTTCCCGCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GELLPPAVIRGT*LTQCLLPSRRA Trigger: GGCCCGGCGGGAAGGGAGAAGACACTGCGTCAAGCAGGTGCCCCGAATAACCGCTGGCGGGAGGAGCTCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000374672.5 ENST00000411706.1 ENST00000493306.1 |
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| CDS GCA 72 bp | CGGTCACGCGTCCGCACCCCTGCTAGCATACGCGCTTaGCGCGCTGTCTGCGCGCTGGAGAAGAGCGCGATT | + |
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Preference number: 6 (lower is better) Translates to: RSRVRTPASIRA*RAVCALEKSAI Trigger: AATCGCGCTCTTCTCCAGCGCGCAGACAGCGCGGCAAGCGCGTATGCTAGCAGGGGTGCGGACGCGTGACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420475.1 |
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| CDS GCA 72 bp | CCCGACATACTGACGTGCTGGCGGGCCACGCGCGACTaGACCGCCCAGACATGGGGACTGGTCAGGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PDILTCWRATRD*TAQTWGLVRQE Trigger: TTCCTGCCTGACCAGTCCCCATGTCTGGGCGGTGCAGTCGCGCGTGGCCCGCCAGCACGTCAGTATGTCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS GCA 72 bp | AGTGGTGGTCCCCTGTTGCCACCCGACATACTGACGTaGTGGCGGGCCACGCGCGACTGCACCGCCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: SGGPLLPPDILT*WRATRDCTAQT Trigger: TGTCTGGGCGGTGCAGTCGCGCGTGGCCCGCCAGCACGTCAGTATGTCGGGTGGCAACAGGGGACCACCACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS GCA 72 bp | AGTCGCTTCATGTGGGAGAGCTCCTCCCGCCAGCGCTaGGGGGACAGGGCGGGAGAGACCTGTCAGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SRFMWESSSRQR*GDRAGETCQWW Trigger: CCACCACTGACAGGTCTCTCCCGCCCTGTCCCCGCAGCGCTGGCGGGAGGAGCTCTCCCACATGAAGCGACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS CAA 90 bp | AGATCGTTGAACTCCTCGGTCTCTCTCCGAGGTAGGGGCGCCAGGTaGCTACCGCCGCAAGCCGCACCGGCTCCGCCGCTCTCCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: RSLNSSVSLRGRGAR*LPPQAAPAPPLSRS Trigger: AGACCTGGAGAGCGGCGGAGCCGGTGCGGCTTGCGGCGGTAGCAACCTGGCGCCCCTACCTCGGAGAGAGACCGAGGAGTTCAACGATCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000374672.5 ENST00000411706.1 ENST00000493306.1 ENST00000497048.5 |
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| CDS GCA 72 bp | AACTTGCCCATCAGCCCGCCACCTGGCGGCTGCGGCTaGTGCGGCGGAATGTACACCGGGTCCAATTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: NLPISPPPGGCG*CGGMYTGSNSG Trigger: GCCAGAATTGGACCCGGTGTACATTCCGCCGCAGCAGCCGCAGCCGCCAGGTGGCGGGCTGATGGGCAAGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000374672.5 ENST00000411706.1 ENST00000493306.1 ENST00000497048.5 |
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| CDS CCA 72 bp | GAAGGTGGGGTGAGCATCATCCCGTGTGTCCCGAAGTaGGGCCAGCACACACAGGGCTCCCCAGCCCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: EGGVSIIPCVPK*GQHTQGSPARA Trigger: AGCTCGGGCTGGGGAGCCCTGTGTGTGCTGGCCCCACTTCGGGACACACGGGATGATGCTCACCCCACCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493306.1 |
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| CDS CCA 72 bp | CGCTGCGGGGACAGGGCGGGAGAGACCTGTCAGTGGTaGTCCCCTGTTGCCACCCGACATACTGACGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RCGDRAGETCQW*SPVATRHTDVL Trigger: CAGCACGTCAGTATGTCGGGTGGCAACAGGGGACCACCACTGACAGGTCTCTCCCGCCCTGTCCCCGCAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS CCA 72 bp | CAGCGCTGCGGGGACAGGGCGGGAGAGACCTGTCAGTaGTGGTCCCCTGTTGCCACCCGACATACTGACGTG | + |
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Preference number: 6 (lower is better) Translates to: QRCGDRAGETCQ*WSPVATRHTDV Trigger: CACGTCAGTATGTCGGGTGGCAACAGGGGACCACCACTGACAGGTCTCTCCCGCCCTGTCCCCGCAGCGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS CAA 72 bp | GAGCTCCTCCCGCCAGCGGTTATTCGGGGCACCTGCTaGACGCAGTGTCTTCTCCCTTCCCGCCGGGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: ELLPPAVIRGTC*TQCLLPSRRAR Trigger: TCTGGCCCGGCGGGAAGGGAGAAGACACTGCGTCAAGCAGGTGCCCCGAATAACCGCTGGCGGGAGGAGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000374672.5 ENST00000411706.1 ENST00000493306.1 |
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| CDS CAA 72 bp | ACAGGGCGGGAGAGACCTGTCAGTGGTGGTCCCCTGTaGCCACCCGACATACTGACGTGCTGGCGGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: TGRERPVSGGPL*PPDILTCWRAT Trigger: CGTGGCCCGCCAGCACGTCAGTATGTCGGGTGGCAACAGGGGACCACCACTGACAGGTCTCTCCCGCCCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497048.5 |
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| CDS GCA 72 bp | CGCACCCCTGCTAGCATACGCGCTTGCCGCGCTGTCTaGGCGCTGGAGAAGAGCGCGATTATCCGCGTGACT | + |
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Preference number: 6 (lower is better) Translates to: RTPASIRACRAV*ALEKSAIIRVT Trigger: AGTCACGCGGATAATCGCGCTCTTCTCCAGCGCGCAGACAGCGCGGCAAGCGCGTATGCTAGCAGGGGTGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420475.1 |
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| CDS GCA 72 bp | GCAGGAACCGGGTGGCATGAGGTTATTCGGGGCACCTaGTTGACGCAGTGTCTTCTCCCTTCCCGCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: AGTGWHEVIRGT*LTQCLLPSRRA Trigger: GGCCCGGCGGGAAGGGAGAAGACACTGCGTCAAGCAGGTGCCCCGAATAACCTCATGCCACCCGGTTCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610832.1 |
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| CDS CAA 90 bp | CACACAGGGCTCCCCAGCCCGAGCTACAAATCCCCGGGACTGACCTaGGTAATGGAGCGGCGGGACTTGCGGCTGCATCTGATCGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: HTGLPSPSYKSPGLT*VMERRDLRLHLIGQ Trigger: CTGCCCGATCAGATGCAGCCGCAAGTCCCGCCGCTCCATTACCAAGGTCAGTCCCGGGGATTTGTAGCTCGGGCTGGGGAGCCCTGTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493306.1 |
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| CDS CCA 72 bp | CGGTGGCCATTGCTGAGAGGGGGTCCAGCGCCCAAGTaGGTGCACGAAGAGACCGCCTCCTGCTTGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: RWPLLRGGPAPK*VHEETASCLIL Trigger: CAAGATCAAGCAGGAGGCGGTCTCTTCGTGCACCCACTTGGGCGCTGGACCCCCTCTCAGCAATGGCCACCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000374672.5 ENST00000493306.1 ENST00000497048.5 |
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| CDS CAA 72 bp | CTCCCCAGCCCGAGCTACAAATCCCCGGGACTGACCTaGGTAATGGAGCGGCGGGACTTGCGGCTGCATCTG | + |
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Preference number: 6 (lower is better) Translates to: LPSPSYKSPGLT*VMERRDLRLHL Trigger: CAGATGCAGCCGCAAGTCCCGCCGCTCCATTACCAAGGTCAGTCCCGGGGATTTGTAGCTCGGGCTGGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493306.1 |
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| CDS CAA 72 bp | GGAACCGGGTGGCATGAGGTTATTCGGGGCACCTGCTaGACGCAGTGTCTTCTCCCTTCCCGCCGGGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: GTGWHEVIRGTC*TQCLLPSRRAR Trigger: TCTGGCCCGGCGGGAAGGGAGAAGACACTGCGTCAAGCAGGTGCCCCGAATAACCTCATGCCACCCGGTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610832.1 |
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| CDS CCA 72 bp | CCACGATCGTCTTCCCCTCTTTGGCTTGGGCTCCTCTaGCATGCAGGAACCGGGTGGCATGAGGTTATTCGG | + |
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Preference number: 6 (lower is better) Translates to: PRSSSPLWLGLL*HAGTGWHEVIR Trigger: CCGAATAACCTCATGCCACCCGGTTCCTGCATGCCAGAGGAGCCCAAGCCAAAGAGGGGAAGACGATCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610832.1 |
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| CDS CAA 72 bp | GAATTGGAGAGAATAAAGTCCAGGTCCAGGAGATCGTaGAACTCCTCGGTCTCTCTCCGAGGTAGGGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: ELERIKSRSRRS*NSSVSLRGRGA Trigger: GGCGCCCCTACCTCGGAGAGAGACCGAGGAGTTCAACGATCTCCTGGACCTGGACTTTATTCTCTCCAATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000374672.5 ENST00000411706.1 ENST00000493306.1 ENST00000497048.5 |
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