Pregenerated sensors for KIR2DS4 (Homo sapiens)
Ensembl gene IDs: ENSG00000221957, ENSG00000273526, ENSG00000276885, ENSG00000283846Ensembl transcript IDs: ENST00000339924.12, ENST00000610558.1, ENST00000611311.1, ENST00000612783.1, ENST00000613654.1, ENST00000614639.1, ENST00000615996.1, ENST00000617469.1, ENST00000617550.1, ENST00000617783.1, ENST00000617825.1, ENST00000618023.5, ENST00000621436.1, ENST00000638401.1, ENST00000638472.1, ENST00000638566.2, ENST00000638933.1, ENST00000639581.1, ENST00000640635.2, ENST00000640817.2, ENST00000640941.2, ENST00000642862.2, ENST00000644051.2, ENST00000644154.2, ENST00000671987.1, ENST00000672173.1, ENST00000672678.1, ENST00000672747.1, ENST00000673394.1, ENST00000673435.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCACGTGTCTAAGTGCTGTGTTAAGAGGCAGCCTCTTGTATGTTTaGAATTGTGAGTTCCTCAGTGTGATTGCAGCCTCAGGTAGACTA | + |
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Preference number: 1 (lower is better) Translates to: STCLSAVLRGSLLYV*NCEFLSVIAASGRL Trigger: TAGTCTACCTGAGGCTGCAATCACACTGAGGAACTCACAATTCCAAACATACAAGAGGCTGCCTCTTAACACAGCACTTAGACACGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 24 transcripts: ENST00000339924.12 ENST00000610558.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617550.1 ENST00000617783.1 ENST00000617825.1 ENST00000618023.5 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000638933.1 ENST00000639581.1 ENST00000640635.2 ENST00000640941.2 ENST00000642862.2 ENST00000644154.2 ENST00000672173.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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| 3UTR CCA 90 bp | AGCACCTGTCTAAGTGCTGTGTTAAGAGGCAGCCTCTTGTATGTTTaGAATTGTGAGTTCCTCAGTGTGATTGCAGCCTCAGGTAGACTA | + |
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Preference number: 1 (lower is better) Translates to: STCLSAVLRGSLLYV*NCEFLSVIAASGRL Trigger: TAGTCTACCTGAGGCTGCAATCACACTGAGGAACTCACAATTCCAAACATACAAGAGGCTGCCTCTTAACACAGCACTTAGACAGGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000611311.1 ENST00000640817.2 ENST00000644051.2 ENST00000671987.1 ENST00000672678.1 |
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| 3UTR CAA 90 bp | AGGTGGAACAGCACGTGTCTAAGTGCTGTGTTAAGAGGCAGCCTCTaGTATGTTTGGAATTGTGAGTTCCTCAGTGTGATTGCAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RWNSTCLSAVLRGSL*YVWNCEFLSVIAAS Trigger: TGAGGCTGCAATCACACTGAGGAACTCACAATTCCAAACATACAAGAGGCTGCCTCTTAACACAGCACTTAGACACGTGCTGTTCCACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 24 transcripts: ENST00000339924.12 ENST00000610558.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617550.1 ENST00000617783.1 ENST00000617825.1 ENST00000618023.5 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000638933.1 ENST00000639581.1 ENST00000640635.2 ENST00000640941.2 ENST00000642862.2 ENST00000644154.2 ENST00000672173.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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| 3UTR CAA 90 bp | AGGTGGAACAGCACCTGTCTAAGTGCTGTGTTAAGAGGCAGCCTCTaGTATGTTTGGAATTGTGAGTTCCTCAGTGTGATTGCAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RWNSTCLSAVLRGSL*YVWNCEFLSVIAAS Trigger: TGAGGCTGCAATCACACTGAGGAACTCACAATTCCAAACATACAAGAGGCTGCCTCTTAACACAGCACTTAGACAGGTGCTGTTCCACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000611311.1 ENST00000640817.2 ENST00000644051.2 ENST00000671987.1 ENST00000672678.1 |
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| CDS-3UTR CCA 90 bp | GCCTCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAGGGGTCTTTCACCAGGTGACCTaGGAGGGCCAGGAAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: ASGRLGSKPVRLERWAGVFHQVT*EGQEGR Trigger: CCTTCCTTCCTGGCCCTCCCAGGTCACCTGGTGAAA...GACCCCTGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 29 transcripts: ENST00000339924.12 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617469.1 ENST00000617550.1 ENST00000617783.1 ENST00000617825.1 ENST00000618023.5 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000638933.1 ENST00000639581.1 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 ENST00000671987.1 ENST00000672173.1 ENST00000672678.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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| CDS-3UTR TCA 90 bp | GCCTCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAGGGGTCGTCTGGGGTTACCTGTaGCGGAAACAAGCAGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: ASGRLGSKPVRLERWAGVVWGYL*RKQAVD Trigger: ATCCACTGCTTGTTTCCGTCACAGGTAACCCCAGAC...GACCCCTGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000671987.1 ENST00000672173.1 ENST00000672678.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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| CDS-3UTR CCA 90 bp | GCCTCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAGGGGTCAAGGAAGGTTTTCTGTaGACTCCCTCCTGTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: ASGRLGSKPVRLERWAGVKEGFL*TPSCGQ Trigger: CTGGCCACAGGAGGGAGTCCACAGAAAACCTTCCTT...GACCCCTGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 25 transcripts: ENST00000339924.12 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617469.1 ENST00000617550.1 ENST00000617825.1 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 ENST00000671987.1 ENST00000672173.1 ENST00000672678.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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| CDS-3UTR CCA 90 bp | GCCTCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAGGGGTCGAACATGTAGGTGTCTaGGGTTACCGGTTTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: ASGRLGSKPVRLERWAGVEHVGV*GYRFWS Trigger: GCTCCAAAACCGGTAACCCCAGACACCTACATGTTC...GACCCCTGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 24 transcripts: ENST00000339924.12 ENST00000610558.1 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617469.1 ENST00000617550.1 ENST00000617783.1 ENST00000617825.1 ENST00000618023.5 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000638933.1 ENST00000639581.1 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 |
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| CDS-3UTR TCA 90 bp | TCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAGGGGTCAAGGTCTGGGGTTACCTGTaGCGGAAACAAGCAGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SGRLGSKPVRLERWAGVKVWGYL*RKQAVD Trigger: ATCCACTGCTTGTTTCCGTCACAGGTAACCCCAGAC...CTTGACCCCTGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000671987.1 ENST00000672173.1 ENST00000672678.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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| CDS-3UTR CCA 90 bp | TCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAGGGGTCAAGAAGGAAGGTTTTCTGTaGACTCCCTCCTGTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGRLGSKPVRLERWAGVKKEGFL*TPSCGQ Trigger: CTGGCCACAGGAGGGAGTCCACAGAAAACCTTCCTT...CTTGACCCCTGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 25 transcripts: ENST00000339924.12 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617469.1 ENST00000617550.1 ENST00000617825.1 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 ENST00000671987.1 ENST00000672173.1 ENST00000672678.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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| CDS-3UTR TCA 90 bp | GCCTCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAGGGGTCTCTCATATAGACCTATaGTCACCATGTCCAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASGRLGSKPVRLERWAGVSHIDL*SPCPEG Trigger: ACCCTCTGGACATGGTGATCATAGGTCTATATGAGA...GACCCCTGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 30 transcripts: ENST00000339924.12 ENST00000610558.1 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617469.1 ENST00000617550.1 ENST00000617783.1 ENST00000617825.1 ENST00000618023.5 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000638933.1 ENST00000639581.1 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 ENST00000671987.1 ENST00000672173.1 ENST00000672678.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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| CDS-3UTR CCA 90 bp | ATTGCAGCCTCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAAAGGAAGGTTTTCTGTaGACTCCCTCCTGTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: IAASGRLGSKPVRLERWAKEGFL*TPSCGQ Trigger: CTGGCCACAGGAGGGAGTCCACAGAAAACCTTCCTT...TGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGAGGCTGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 25 transcripts: ENST00000339924.12 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617469.1 ENST00000617550.1 ENST00000617825.1 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 ENST00000671987.1 ENST00000672173.1 ENST00000672678.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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| CDS-3UTR CCA 90 bp | TCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAGGGGTCAAGGAACATGTAGGTGTCTaGGGTTACCGGTTTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SGRLGSKPVRLERWAGVKEHVGV*GYRFWS Trigger: GCTCCAAAACCGGTAACCCCAGACACCTACATGTTC...CTTGACCCCTGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 24 transcripts: ENST00000339924.12 ENST00000610558.1 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617469.1 ENST00000617550.1 ENST00000617783.1 ENST00000617825.1 ENST00000618023.5 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000638933.1 ENST00000639581.1 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 |
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| CDS-3UTR CCA 90 bp | TCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAGGGGTCAAGAAGGAAGGTTTTCTGTaGACTTCCTCCTGTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SGRLGSKPVRLERWAGVKKEGFL*TSSCGQ Trigger: CTGGCCACAGGAGGAAGTCCACAGAAAACCTTCCTT...CTTGACCCCTGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000618023.5 ENST00000638933.1 ENST00000639581.1 |
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| CDS-3UTR CCA 90 bp | ATTGCAGCCTCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAGAACATGTAGGTGTCTaGGGTTACCGGTTTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: IAASGRLGSKPVRLERWAEHVGV*GYRFWS Trigger: GCTCCAAAACCGGTAACCCCAGACACCTACATGTTC...TGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGAGGCTGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 24 transcripts: ENST00000339924.12 ENST00000610558.1 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617469.1 ENST00000617550.1 ENST00000617783.1 ENST00000617825.1 ENST00000618023.5 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000638933.1 ENST00000639581.1 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 |
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| CDS-3UTR CCA 90 bp | ATTGCAGCCTCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAAAGGAAGGTTTTCTGTaGACTTCCTCCTGTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: IAASGRLGSKPVRLERWAKEGFL*TSSCGQ Trigger: CTGGCCACAGGAGGAAGTCCACAGAAAACCTTCCTT...TGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGAGGCTGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000618023.5 ENST00000638933.1 ENST00000639581.1 |
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| CDS-3UTR TCA 90 bp | TCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAGGGGTCAAGTCTCATATAGACCTATaGTCACCATGTCCAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: SGRLGSKPVRLERWAGVKSHIDL*SPCPEG Trigger: ACCCTCTGGACATGGTGATCATAGGTCTATATGAGA...CTTGACCCCTGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 30 transcripts: ENST00000339924.12 ENST00000610558.1 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617469.1 ENST00000617550.1 ENST00000617783.1 ENST00000617825.1 ENST00000618023.5 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000638933.1 ENST00000639581.1 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 ENST00000671987.1 ENST00000672173.1 ENST00000672678.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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| CDS-3UTR TCA 90 bp | ATTGCAGCCTCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCATTGAAGGGTTTCCTGTaGCGGAAACAAGCAGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: IAASGRLGSKPVRLERWALKGFL*RKQAVD Trigger: ATCCACTGCTTGTTTCCGTCACAGGAAACCCTTCAA...TGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGAGGCTGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 24 transcripts: ENST00000339924.12 ENST00000610558.1 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617469.1 ENST00000617550.1 ENST00000617783.1 ENST00000617825.1 ENST00000618023.5 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000638933.1 ENST00000639581.1 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 |
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| CDS-3UTR CCA 90 bp | TCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCAGGGGTCAAGAAGGAAGGTTTTCTGTaGACTCCTGTGACCATGATC | + |
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Preference number: 4 (lower is better) Translates to: SGRLGSKPVRLERWAGVKKEGFL*TPVTMI Trigger: GATCATGGTCACAGGAGTCCACAGAAAACCTTCCTT...CTTGACCCCTGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617783.1 |
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| CDS-3UTR TCA 90 bp | ATTGCAGCCTCAGGTAGACTAGGAAGTAAGCCAGTTAGGTTGGAGAGGTGGGCATCTCATATAGACCTATaGTCACCATGTCCAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: IAASGRLGSKPVRLERWASHIDL*SPCPEG Trigger: ACCCTCTGGACATGGTGATCATAGGTCTATATGAGA...TGCCCACCTCTCCAACCTAACTGGCTTACTTCCTAGTCTACCTGAGGCTGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 30 transcripts: ENST00000339924.12 ENST00000610558.1 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617469.1 ENST00000617550.1 ENST00000617783.1 ENST00000617825.1 ENST00000618023.5 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000638933.1 ENST00000639581.1 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 ENST00000671987.1 ENST00000672173.1 ENST00000672678.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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| CDS-3UTR TCA 90 bp | TTGTATGTTTGGAATTGTGAGTTCCTCAGTGTGATTGCAGCCTCAGGTAGACTAGTCTGGGGTTACCTGTaGCGGAAACAAGCAGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: LYVWNCEFLSVIAASGRLVWGYL*RKQAVD Trigger: ATCCACTGCTTGTTTCCGTCACAGGTAACCCCAGAC...TAGTCTACCTGAGGCTGCAATCACACTGAGGAACTCACAATTCCAAACATACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000671987.1 ENST00000672173.1 ENST00000672678.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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| CDS-3UTR CCA 90 bp | TTGTATGTTTGGAATTGTGAGTTCCTCAGTGTGATTGCAGCCTCAGGTAGACTAAAGGAAGGTTTTCTGTaGACTCCCTCCTGTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LYVWNCEFLSVIAASGRLKEGFL*TPSCGQ Trigger: CTGGCCACAGGAGGGAGTCCACAGAAAACCTTCCTT...TAGTCTACCTGAGGCTGCAATCACACTGAGGAACTCACAATTCCAAACATACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 24 transcripts: ENST00000339924.12 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617550.1 ENST00000617825.1 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 ENST00000671987.1 ENST00000672173.1 ENST00000672678.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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| CDS-3UTR CCA 90 bp | TTGTATGTTTGGAATTGTGAGTTCCTCAGTGTGATTGCAGCCTCAGGTAGACTAGAACATGTAGGTGTCTaGGGTTACCGGTTTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LYVWNCEFLSVIAASGRLEHVGV*GYRFWS Trigger: GCTCCAAAACCGGTAACCCCAGACACCTACATGTTC...TAGTCTACCTGAGGCTGCAATCACACTGAGGAACTCACAATTCCAAACATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 23 transcripts: ENST00000339924.12 ENST00000610558.1 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617550.1 ENST00000617783.1 ENST00000617825.1 ENST00000618023.5 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000638933.1 ENST00000639581.1 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 |
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| 3UTR CAA 72 bp | AGCACCTGTCTAAGTGCTGTGTTAAGAGGCAGCCTCTaGTATGTTTGGAATTGTGAGTTCCTCAGTGTGATT | + |
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Preference number: 4 (lower is better) Translates to: STCLSAVLRGSL*YVWNCEFLSVI Trigger: AATCACACTGAGGAACTCACAATTCCAAACATACAAGAGGCTGCCTCTTAACACAGCACTTAGACAGGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000611311.1 ENST00000640817.2 ENST00000644051.2 ENST00000671987.1 ENST00000672678.1 |
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| CDS-3UTR TCA 90 bp | TTGTATGTTTGGAATTGTGAGTTCCTCAGTGTGATTGCAGCCTCAGGTAGACTATCTCATATAGACCTATaGTCACCATGTCCAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LYVWNCEFLSVIAASGRLSHIDL*SPCPEG Trigger: ACCCTCTGGACATGGTGATCATAGGTCTATATGAGA...TAGTCTACCTGAGGCTGCAATCACACTGAGGAACTCACAATTCCAAACATACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 29 transcripts: ENST00000339924.12 ENST00000610558.1 ENST00000611311.1 ENST00000612783.1 ENST00000613654.1 ENST00000614639.1 ENST00000615996.1 ENST00000617550.1 ENST00000617783.1 ENST00000617825.1 ENST00000618023.5 ENST00000621436.1 ENST00000638401.1 ENST00000638472.1 ENST00000638566.2 ENST00000638933.1 ENST00000639581.1 ENST00000640635.2 ENST00000640817.2 ENST00000640941.2 ENST00000642862.2 ENST00000644051.2 ENST00000644154.2 ENST00000671987.1 ENST00000672173.1 ENST00000672678.1 ENST00000672747.1 ENST00000673394.1 ENST00000673435.1 |
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