Pregenerated sensors for KIR2DL5A (Homo sapiens)
Ensembl gene IDs: ENSG00000274143, ENSG00000274676Ensembl transcript IDs: ENST00000612730.1, ENST00000621273.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AGGTGGAACAGCACGTGTCTCAGTGCCATGTTAAGAGGGAGCCTCTaGTATGTCTGGAATTGTGAGTTCCTCAGTGTGATTGCAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: RWNSTCLSAMLRGSL*YVWNCEFLSVIAAS Trigger: TGAGGCTGCAATCACACTGAGGAACTCACAATTCCAGACATACAAGAGGCTCCCTCTTAACATGGCACTGAGACACGTGCTGTTCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612730.1 ENST00000621273.1 |
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| CDS-3UTR GCA 90 bp | CTCTTGTATGTCTGGAATTGTGAGTTCCTCAGTGTGATTGCAGCCTCAAGTAGACAGCACGTGTCTCAGTaGCATGTTAAGAGGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLYVWNCEFLSVIAASSRQHVSQ*HVKREP Trigger: AGGCTCCCTCTTAACATGGCACTGAGACACGTGCTG...TCTACTTGAGGCTGCAATCACACTGAGGAACTCACAATTCCAGACATACAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612730.1 ENST00000621273.1 |
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| 3UTR CAA 72 bp | AGCACGTGTCTCAGTGCCATGTTAAGAGGGAGCCTCTaGTATGTCTGGAATTGTGAGTTCCTCAGTGTGATT | + |
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Preference number: 4 (lower is better) Translates to: STCLSAMLRGSL*YVWNCEFLSVI Trigger: AATCACACTGAGGAACTCACAATTCCAGACATACAAGAGGCTCCCTCTTAACATGGCACTGAGACACGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612730.1 ENST00000621273.1 |
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| CDS-3UTR CAA 90 bp | AGAGGGAGCCTCTTGTATGTCTGGAATTGTGAGTTCCTCAGTGTGATTGCAGCCAGTAAGCCAGTTCAGTaGGAGAGGTGGGCAGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: RGSLLYVWNCEFLSVIAASKPVQ*ERWAGV Trigger: GACCCCTGCCCACCTCTCCAACTGAACTGGCTTACT...GGCTGCAATCACACTGAGGAACTCACAATTCCAGACATACAAGAGGCTCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000612730.1 ENST00000621273.1 |
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| CDS-3UTR CAA 90 bp | GTAAGCCAGTTCAGTTGGAGAGGTGGGCAGGGGTCAAGTGAAATAGAGAATTGTAGTAAGCCAGTTCAGTaGGAGAGGTGGGCAGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: VSQFSWRGGQGSSEIENCSKPVQ*ERWAGV Trigger: GACCCCTGCCCACCTCTCCAACTGAACTGGCTTACT...ACAATTCTCTATTTCACTTGACCCCTGCCCACCTCTCCAACTGAACTGGCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000612730.1 ENST00000621273.1 |
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