Pregenerated sensors for KIF27 (Homo sapiens)
Ensembl gene IDs: ENSG00000165115Ensembl transcript IDs: ENST00000297814.7, ENST00000334204.6, ENST00000413982.5
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCTGGATTCCGGCTCGGGACAGCCCAGGCCCCTGTCGGCGAGCGCTaGACTCCTCAGCTTCGCTCTGCCACACCGCGCAGCCGCCGTCCG | + |
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Preference number: 5 (lower is better) Translates to: SGFRLGTAQAPVGER*TPQLRSATPRSRRP Trigger: CGGACGGCGGCTGCGCGGTGTGGCAGAGCGAAGCTGAGGAGTCCAGCGCTCGCCGACAGGGGCCTGGGCTGTCCCGAGCCGGAATCCAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334204.6 ENST00000413982.5 |
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| CDS TCA 90 bp | CTGTGGTCCTTCTTCCAGACTTGCAGTGCCTCCGATTCCTCGAAATaGGGTGAGGACAGCCTTCCTGACCTCTTGGATCATGTTAAACCA | + |
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Preference number: 5 (lower is better) Translates to: LWSFFQTCSASDSSK*GEDSLPDLLDHVKP Trigger: TGGTTTAACATGATCCAAGAGGTCAGGAAGGCTGTCCTCACCTCATTTCGAGGAATCGGAGGCACTGCAAGTCTGGAAGAAGGACCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS GCA 90 bp | TCTGCTGGAGTGCTCATTCATTTGAGTGGTACCTGTATGTCTGGCTaGATTCCCCATCTCCAAAAGACTCATCACTTCACCTGCACTCTC | + |
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Preference number: 5 (lower is better) Translates to: SAGVLIHLSGTCMSG*IPHLQKTHHFTCTL Trigger: GAGAGTGCAGGTGAAGTGATGAGTCTTTTGGAGATGGGGAATGCAGCCAGACATACAGGTACCACTCAAATGAATGAGCACTCCAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS GCA 90 bp | GGACTCCCTTCTCGATTGATCTGGGTAGTTTGGCTGACACCAGCCTaGTGGCTTTGCAAAGCTTCTCGAAGCAATTTAATCTCAAATTCC | + |
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Preference number: 5 (lower is better) Translates to: GLPSRLIWVVWLTPA*WLCKASRSNLISNS Trigger: GGAATTTGAGATTAAATTGCTTCGAGAAGCTTTGCAAAGCCAGCAGGCTGGTGTCAGCCAAACTACCCAGATCAATCGAGAAGGGAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CCA 90 bp | ATCCTATTTGTATCAGGACTCCCTTCTCGATTGATCTGGGTAGTTTaGCTGACACCAGCCTGCTGGCTTTGCAAAGCTTCTCGAAGCAAT | + |
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Preference number: 5 (lower is better) Translates to: ILFVSGLPSRLIWVV*LTPACWLCKASRSN Trigger: ATTGCTTCGAGAAGCTTTGCAAAGCCAGCAGGCTGGTGTCAGCCAAACTACCCAGATCAATCGAGAAGGGAGTCCTGATACAAATAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CCA 90 bp | CTCCCTTCTCGATTGATCTGGGTAGTTTGGCTGACACCAGCCTGCTaGCTTTGCAAAGCTTCTCGAAGCAATTTAATCTCAAATTCCATT | + |
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Preference number: 5 (lower is better) Translates to: LPSRLIWVVWLTPAC*LCKASRSNLISNSI Trigger: AATGGAATTTGAGATTAAATTGCTTCGAGAAGCTTTGCAAAGCCAGCAGGCTGGTGTCAGCCAAACTACCCAGATCAATCGAGAAGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS TCA 90 bp | ATCTTTCAGAAGCCGGGTAATTTTAGCATCCCTATATGGAATATGTaGACTCTTCCTGCGTGGGTCCCCAAGAGCGCTTATTACATTTCC | + |
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Preference number: 5 (lower is better) Translates to: IFQKPGNFSIPIWNM*TLPAWVPKSAYYIS Trigger: GGAAATGTAATAAGCGCTCTTGGGGACCCACGCAGGAAGAGTTCACATATTCCATATAGGGATGCTAAAATTACCCGGCTTCTGAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS GCA 90 bp | GTGAGGACAGCCTTCCTGACCTCTTGGATCATGTTAAACCACTCCTaGAGTTTGTGTTGCTGCTTTTCGTTTAGTCTGACAGTATCTTTT | + |
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Preference number: 5 (lower is better) Translates to: VRTAFLTSWIMLNHS*SLCCCFSFSLTVSF Trigger: AAAAGATACTGTCAGACTAAACGAAAAGCAGCAACACAAACTGCAGGAGTGGTTTAACATGATCCAAGAGGTCAGGAAGGCTGTCCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS GCA 90 bp | TCTCGATTGATCTGGGTAGTTTGGCTGACACCAGCCTGCTGGCTTTaGAAAGCTTCTCGAAGCAATTTAATCTCAAATTCCATTTCATCT | + |
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Preference number: 5 (lower is better) Translates to: SRLIWVVWLTPACWL*KASRSNLISNSISS Trigger: AGATGAAATGGAATTTGAGATTAAATTGCTTCGAGAAGCTTTGCAAAGCCAGCAGGCTGGTGTCAGCCAAACTACCCAGATCAATCGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS GCA 90 bp | CTGACCTCTTGGATCATGTTAAACCACTCCTGCAGTTTGTGTTGCTaGTTTTCGTTTAGTCTGACAGTATCTTTTAGGTCAACCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LTSWIMLNHSCSLCC*FSFSLTVSFRSTRK Trigger: CTTCCTGGTTGACCTAAAAGATACTGTCAGACTAAACGAAAAGCAGCAACACAAACTGCAGGAGTGGTTTAACATGATCCAAGAGGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS GCA 90 bp | TTCCTGACCTCTTGGATCATGTTAAACCACTCCTGCAGTTTGTGTTaGTGCTTTTCGTTTAGTCTGACAGTATCTTTTAGGTCAACCAGG | + |
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Preference number: 5 (lower is better) Translates to: FLTSWIMLNHSCSLC*CFSFSLTVSFRSTR Trigger: CCTGGTTGACCTAAAAGATACTGTCAGACTAAACGAAAAGCAGCAACACAAACTGCAGGAGTGGTTTAACATGATCCAAGAGGTCAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS TCA 90 bp | AGAGCGCTTATTACATTTCCTAAAGCCAGCAATCCACTATTGATTTaGATGGATTCTTTGAACCGTTCACCAGTATTCCCCGTTTTGGTT | + |
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Preference number: 5 (lower is better) Translates to: RALITFPKASNPLLI*MDSLNRSPVFPVLV Trigger: AACCAAAACGGGGAATACTGGTGAACGGTTCAAAGAATCCATTCAAATCAATAGTGGATTGCTGGCTTTAGGAAATGTAATAAGCGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS TCA 90 bp | TTCTCGAAGCAATTTAATCTCAAATTCCATTTCATCTATACGGTCTaGCTCGGGGCTGAAGTTTACAGTGGGTTTGTTTCTAATGTTCCG | + |
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Preference number: 5 (lower is better) Translates to: FSKQFNLKFHFIYTV*LGAEVYSGFVSNVP Trigger: CGGAACATTAGAAACAAACCCACTGTAAACTTCAGCCCCGAGTCAGACCGTATAGATGAAATGGAATTTGAGATTAAATTGCTTCGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CCA 72 bp | CGGCTCGGGACAGCCCAGGCCCCTGTCGGCGAGCGCTaGACTCCTCAGCTTCGCTCTGCCACACCGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RLGTAQAPVGER*TPQLRSATPRS Trigger: GCTGCGCGGTGTGGCAGAGCGAAGCTGAGGAGTCCAGCGCTCGCCGACAGGGGCCTGGGCTGTCCCGAGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334204.6 ENST00000413982.5 |
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| CDS GCA 72 bp | CCCTGTCGGCGAGCGCTGGACTCCTCAGCTTCGCTCTaGCACACCGCGCAGCCGCCGTCCGCGTCTTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PCRRALDSSASL*HTAQPPSASFV Trigger: AACAAAAGACGCGGACGGCGGCTGCGCGGTGTGGCAGAGCGAAGCTGAGGAGTCCAGCGCTCGCCGACAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334204.6 ENST00000413982.5 |
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| CDS TCA 72 bp | TTCTTCCAGACTTGCAGTGCCTCCGATTCCTCGAAATaGGGTGAGGACAGCCTTCCTGACCTCTTGGATCAT | + |
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Preference number: 6 (lower is better) Translates to: FFQTCSASDSSK*GEDSLPDLLDH Trigger: ATGATCCAAGAGGTCAGGAAGGCTGTCCTCACCTCATTTCGAGGAATCGGAGGCACTGCAAGTCTGGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CCA 72 bp | GTATCAGGACTCCCTTCTCGATTGATCTGGGTAGTTTaGCTGACACCAGCCTGCTGGCTTTGCAAAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VSGLPSRLIWVV*LTPACWLCKAS Trigger: AGAAGCTTTGCAAAGCCAGCAGGCTGGTGTCAGCCAAACTACCCAGATCAATCGAGAAGGGAGTCCTGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CCA 72 bp | AAGCTCTCTCTTCAGCTGGAGAACTGTAACATGCTGTaGTCCTTCTTCCAGACTTGCAGTGCCTCCGATTCC | + |
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Preference number: 6 (lower is better) Translates to: KLSLQLENCNML*SFFQTCSASDS Trigger: GGAATCGGAGGCACTGCAAGTCTGGAAGAAGGACCACAGCATGTTACAGTTCTCCAGCTGAAGAGAGAGCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CCA 72 bp | ATCCTATTTGTATCAGGACTCCCTTCTCGATTGATCTaGGTAGTTTGGCTGACACCAGCCTGCTGGCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: ILFVSGLPSRLI*VVWLTPACWLC Trigger: GCAAAGCCAGCAGGCTGGTGTCAGCCAAACTACCCAGATCAATCGAGAAGGGAGTCCTGATACAAATAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS GCA 72 bp | CCTGCCAAATCCACAAAGTGGAACTTTGAGACAATATaGCGAGGGGAATACCATGATCCATCTTCAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PAKSTKWNFETI*RGEYHDPSSAA Trigger: GGCAGCTGAAGATGGATCATGGTATTCCCCTCGGCATATTGTCTCAAAGTTCCACTTTGTGGATTTGGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CCA 72 bp | TCCAAAAGACTCATCACTTCACCTGCACTCTCCACATaGCATTCCTTGGCCCCAACAATCACTGTGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SKRLITSPALST*HSLAPTITVFP Trigger: AGGAAACACAGTGATTGTTGGGGCCAAGGAATGCCATGTGGAGAGTGCAGGTGAAGTGATGAGTCTTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CCA 72 bp | CGATTGATCTGGGTAGTTTGGCTGACACCAGCCTGCTaGCTTTGCAAAGCTTCTCGAAGCAATTTAATCTCA | + |
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Preference number: 6 (lower is better) Translates to: RLIWVVWLTPAC*LCKASRSNLIS Trigger: TGAGATTAAATTGCTTCGAGAAGCTTTGCAAAGCCAGCAGGCTGGTGTCAGCCAAACTACCCAGATCAATCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CAA 72 bp | CTCATCACTTCACCTGCACTCTCCACATGGCATTCCTaGGCCCCAACAATCACTGTGTTTCCTTTTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: LITSPALSTWHS*APTITVFPFSS Trigger: AGATGAAAAAGGAAACACAGTGATTGTTGGGGCCAAGGAATGCCATGTGGAGAGTGCAGGTGAAGTGATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS TCA 72 bp | AAAATTGCATGTGATCTGCTGGAGTGCTCATTCATTTaGGTGGTACCTGTATGTCTGGCTGCATTCCCCATC | + |
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Preference number: 6 (lower is better) Translates to: KIACDLLECSFI*VVPVCLAAFPI Trigger: GATGGGGAATGCAGCCAGACATACAGGTACCACTCAAATGAATGAGCACTCCAGCAGATCACATGCAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CCA 72 bp | TCATCACTTCACCTGCACTCTCCACATGGCATTCCTTaGCCCCAACAATCACTGTGTTTCCTTTTTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: SSLHLHSPHGIP*PQQSLCFLFHL Trigger: AAGATGAAAAAGGAAACACAGTGATTGTTGGGGCCAAGGAATGCCATGTGGAGAGTGCAGGTGAAGTGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CAA 90 bp | TACACAACACTGGTAACCCAGACATTCTCCTTGAAGCTGAGCTACTaGCTCCTCAAGAGAATGAATCCTATTTGTATCAGGACTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: YTTLVTQTFSLKLSY*LLKRMNPICIRTPF Trigger: GAAGGGAGTCCTGATACAAATAGGATTCATTCTCTTGAGGAGCAAGTAGCTCAGCTTCAAGGAGAATGTCTGGGTTACCAGTGTTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CAA 72 bp | CTGGTAACCCAGACATTCTCCTTGAAGCTGAGCTACTaGCTCCTCAAGAGAATGAATCCTATTTGTATCAGG | + |
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Preference number: 6 (lower is better) Translates to: LVTQTFSLKLSY*LLKRMNPICIR Trigger: CCTGATACAAATAGGATTCATTCTCTTGAGGAGCAAGTAGCTCAGCTTCAAGGAGAATGTCTGGGTTACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CAA 90 bp | ACAGCCTTCCTGACCTCTTGGATCATGTTAAACCACTCCTGCAGTTaGTGTTGCTGCTTTTCGTTTAGTCTGACAGTATCTTTTAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: TAFLTSWIMLNHSCS*CCCFSFSLTVSFRS Trigger: TGACCTAAAAGATACTGTCAGACTAAACGAAAAGCAGCAACACAAACTGCAGGAGTGGTTTAACATGATCCAAGAGGTCAGGAAGGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CAA 72 bp | ATGGATTCTTTGAACCGTTCACCAGTATTCCCCGTTTaGGTTACTCTTTCTGATCCTGCCAAATCCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: MDSLNRSPVFPV*VTLSDPAKSTK Trigger: CTTTGTGGATTTGGCAGGATCAGAAAGAGTAACCAAAACGGGGAATACTGGTGAACGGTTCAAAGAATCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CAA 72 bp | TTCTTCTACACAACACTGGTAACCCAGACATTCTCCTaGAAGCTGAGCTACTTGCTCCTCAAGAGAATGAAT | + |
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Preference number: 6 (lower is better) Translates to: FFYTTLVTQTFS*KLSYLLLKRMN Trigger: ATTCATTCTCTTGAGGAGCAAGTAGCTCAGCTTCAAGGAGAATGTCTGGGTTACCAGTGTTGTGTAGAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CAA 72 bp | CTGACCTCTTGGATCATGTTAAACCACTCCTGCAGTTaGTGTTGCTGCTTTTCGTTTAGTCTGACAGTATCT | + |
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Preference number: 6 (lower is better) Translates to: LTSWIMLNHSCS*CCCFSFSLTVS Trigger: AGATACTGTCAGACTAAACGAAAAGCAGCAACACAAACTGCAGGAGTGGTTTAACATGATCCAAGAGGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CAA 90 bp | TTTACAGTGGGTTTGTTTCTAATGTTCCGTGCTCTGTTGGCATATTaGAGAGAATTTAAGGACTCATCAAAATTCGAGGAGGAGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: FTVGLFLMFRALLAY*REFKDSSKFEEEGL Trigger: CAGCCCCTCCTCCTCGAATTTTGATGAGTCCTTAAATTCTCTCAAATATGCCAACAGAGCACGGAACATTAGAAACAAACCCACTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CAA 90 bp | ATTTCATCTATACGGTCTGACTCGGGGCTGAAGTTTACAGTGGGTTaGTTTCTAATGTTCCGTGCTCTGTTGGCATATTTGAGAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: ISSIRSDSGLKFTVG*FLMFRALLAYLREF Trigger: AAATTCTCTCAAATATGCCAACAGAGCACGGAACATTAGAAACAAACCCACTGTAAACTTCAGCCCCGAGTCAGACCGTATAGATGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS GCA 72 bp | TGGATCATGTTAAACCACTCCTGCAGTTTGTGTTGCTaGTTTTCGTTTAGTCTGACAGTATCTTTTAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: WIMLNHSCSLCC*FSFSLTVSFRS Trigger: TGACCTAAAAGATACTGTCAGACTAAACGAAAAGCAGCAACACAAACTGCAGGAGTGGTTTAACATGATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS GCA 72 bp | TCTTGGATCATGTTAAACCACTCCTGCAGTTTGTGTTaGTGCTTTTCGTTTAGTCTGACAGTATCTTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: SWIMLNHSCSLC*CFSFSLTVSFR Trigger: CCTAAAAGATACTGTCAGACTAAACGAAAAGCAGCAACACAAACTGCAGGAGTGGTTTAACATGATCCAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS TCA 72 bp | ATGAACTTGACAAATGCTGATTGTAAAAATTGCATGTaGTCTGCTGGAGTGCTCATTCATTTGAGTGGTACC | + |
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Preference number: 6 (lower is better) Translates to: MNLTNADCKNCM*SAGVLIHLSGT Trigger: GGTACCACTCAAATGAATGAGCACTCCAGCAGATCACATGCAATTTTTACAATCAGCATTTGTCAAGTTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS TCA 72 bp | ATTACATTTCCTAAAGCCAGCAATCCACTATTGATTTaGATGGATTCTTTGAACCGTTCACCAGTATTCCCC | + |
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Preference number: 6 (lower is better) Translates to: ITFPKASNPLLI*MDSLNRSPVFP Trigger: GGGGAATACTGGTGAACGGTTCAAAGAATCCATTCAAATCAATAGTGGATTGCTGGCTTTAGGAAATGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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| CDS CAA 72 bp | GGTTTGTTTCTAATGTTCCGTGCTCTGTTGGCATATTaGAGAGAATTTAAGGACTCATCAAAATTCGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GLFLMFRALLAY*REFKDSSKFEE Trigger: CTCCTCGAATTTTGATGAGTCCTTAAATTCTCTCAAATATGCCAACAGAGCACGGAACATTAGAAACAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000297814.7 ENST00000334204.6 ENST00000413982.5 |
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