RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIF21A (Homo sapiens)

Ensembl gene IDs: ENSG00000139116

Ensembl transcript IDs: ENST00000361418.10, ENST00000361961.7, ENST00000541463.6, ENST00000544797.6, ENST00000546817.1, ENST00000547108.5, ENST00000547733.1, ENST00000550429.1, ENST00000551066.1, ENST00000551264.5, ENST00000552475.1, ENST00000552908.1, ENST00000552961.5, ENST00000636569.1

Found 657 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATCCAGGTGTGTTTTCTaGCTGTCACAAAAGCAGACG +
Preference number: 2 (lower is better)
Translates to: LFPPQMIIALIIATKVRKSRCVF*LSQKQT
Trigger: CGTCTGCTTTTGTGACAGTCAGAAAACACACCTGGA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
3UTR-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGAGTTAATGGTGGGCTaGATCGTATTCCAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKELMVG*IVFQVC
Trigger: ACACACCTGGAATACGATGCAGCCCACCATTAACTC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
3UTR-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACCGATTCATACGTTTTaGCTAGTAAGTACAGGACAA +
Preference number: 2 (lower is better)
Translates to: LFPPQMIIALIIATKVRKPIHTF*LVSTGQ
Trigger: TTGTCCTGTACTTACTAGGCAAAACGTATGAATCGG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
3UTR-3UTR CCA 90 bp TCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTTGTATGACAAAAGGTAGCAGATaGGATACTGAATGGAAAACA +
Preference number: 2 (lower is better)
Translates to: SSEEEIISRIHTEHSFCMTKGSR*DTEWKT
Trigger: TGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGT...CATACAAAAGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547108.5
3UTR-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTCCAGGTGTGTTTTCTaGCTGTCACAAAAGCAGACG +
Preference number: 2 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHSRCVF*LSQKQT
Trigger: CGTCTGCTTTTGTGACAGTCAGAAAACACACCTGGA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
3UTR-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGAGTTAATGGTGGGCTaGATCGTATTCCAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHELMVG*IVFQVC
Trigger: ACACACCTGGAATACGATGCAGCCCACCATTAACTC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
3UTR-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGAATCCACTACAGACTaGTATAAATACCTGACAAGC +
Preference number: 2 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKESTTD*YKYLTS
Trigger: GCTTGTCAGGTATTTATATCAGTCTGTAGTGGATTC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
3UTR-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACCGATTCATACGTTTTaGCTAGTAAGTACAGGACAA +
Preference number: 2 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKPIHTF*LVSTGQ
Trigger: TTGTCCTGTACTTACTAGGCAAAACGTATGAATCGG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
3UTR-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCCGATTCATACGTTTTaGCTAGTAAGTACAGGACAA +
Preference number: 2 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNPIHTF*LVSTGQ
Trigger: TTGTCCTGTACTTACTAGGCAAAACGTATGAATCGG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
3UTR-3UTR CCA 90 bp AATTACATAGGCCACCTCAAGCACATGCAAGAAAGTTCTGCCATCATTAAAATTACACACAGGACTATGTaGGAAAATCTTTCTTTGTCC +
Preference number: 2 (lower is better)
Translates to: NYIGHLKHMQESSAIIKITHRTM*ENLSLS
Trigger: GGACAAAGAAAGATTTTCCCACATAGTCCTGTGTGT...AATTTTAATGATGGCAGAACTTTCTTGCATGTGCTTGAGGTGGCCTATGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
3UTR-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGAATCCACTACAGACTaGTATAAATACCTGACAAGC +
Preference number: 2 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHESTTD*YKYLTS
Trigger: GCTTGTCAGGTATTTATATCAGTCTGTAGTGGATTC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
3UTR-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAATAAACTACATGAATaGGTTAATGGTGGGCTGCAT +
Preference number: 2 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSNKLHE*VNGGLH
Trigger: ATGCAGCCCACCATTAACTCATTCATGTAGTTTATT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
3UTR-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATCCGATTCATACGTTTaGCCTAGTAAGTACAGGACA +
Preference number: 3 (lower is better)
Translates to: LFPPQMIIALIIATKVRKSDSYV*PSKYRT
Trigger: TGTCCTGTACTTACTAGGCAAAACGTATGAATCGGA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
3UTR-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATCCGATTCATACGTTTaGCCTAGTAAGTACAGGACA +
Preference number: 3 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKSDSYV*PSKYRT
Trigger: TGTCCTGTACTTACTAGGCAAAACGTATGAATCGGA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
3UTR-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTCCGATTCATACGTTTaGCCTAGTAAGTACAGGACA +
Preference number: 3 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCSDSYV*PSKYRT
Trigger: TGTCCTGTACTTACTAGGCAAAACGTATGAATCGGA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACCGGGGCGCCCAACATaGTGGCGGCGGGCAGCGATC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKPGRPT*WRRAAI
Trigger: GATCGCTGCCCGCCGCCAGCATGTTGGGCGCCCCGG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361418.10
ENST00000361961.7
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACGGCGAGCGCGCCTGTaGAGAAGCCAACAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKRRARL*RSQQAA
Trigger: GGCGGCCTGTTGGCTTCTCCACAGGCGCGCTCGCCG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361961.7
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTCCCAGCGGCCAGGCTaGGGACTCCACGCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNSQRPG*GLHARQ
Trigger: CTGGCGGGCGTGGAGTCCCCAGCCTGGCCGCTGGGA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361961.7
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACAGCGATCGAGCCGTTaGGCCTCGGCACCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKQRSSR*ASAPQS
Trigger: GCTCTGCGGTGCCGAGGCCCAACGGCTCGATCGCTG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361418.10
ENST00000361961.7
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTCGGCACCGCAGAGCTaGGGCGCCACTGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHSAPQS*GATGAA
Trigger: CGCGGCCCCAGTGGCGCCTCAGCTCTGCGGTGCCGA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361418.10
ENST00000361961.7
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGGGACAAAGCGCGCTTaGACGGCGAGCGCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNGTKRA*TASAPV
Trigger: CACAGGCGCGCTCGCCGTTCAAGCGCGCTTTGTCCC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361961.7
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCCGGGGCGCCCAACATaGTGGCGGCGGGCAGCGATC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSPGRPT*WRRAAI
Trigger: GATCGCTGCCCGCCGCCAGCATGTTGGGCGCCCCGG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361418.10
ENST00000361961.7
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAGCAAGAGGAGGAGGTaGTTCACGGCTCGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKSKRRR*FTARGR
Trigger: GCGCCCGCGAGCCGTGAATCACCTCCTCCTCTTGCT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361961.7
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGGGCGCCCAACATGCTaGCGGCGGGCAGCGATCGAG +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSGRPTC*RRAAIE
Trigger: CTCGATCGCTGCCCGCCGCCAGCATGTTGGGCGCCC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361418.10
ENST00000361961.7
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGGGCGCCCAACATGCTaGCGGCGGGCAGCGATCGAG +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCGRPTC*RRAAIE
Trigger: CTCGATCGCTGCCCGCCGCCAGCATGTTGGGCGCCC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361418.10
ENST00000361961.7
CDS-3UTR GCA 90 bp CCTTTTGATCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTAATCTCTTGCCCTTCTaGAACAGGTGTGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PFDPVKRRSSVESTQSTANLLPF*NRCERA
Trigger: GGCCCTCTCACACCTGTTGCAGAAGGGCAAGAGATT...AGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGATCAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACAAAACTGGGTGGTCTaGCACCACTCCCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKQNWVV*HHSQGT
Trigger: TGTGCCCTGGGAGTGGTGCCAGACCACCCAGTTTTG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACTGAGCAAAACTGGGTaGTCTGGCACCACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKLSKTG*SGTTPR
Trigger: CCTGGGAGTGGTGCCAGACCACCCAGTTTTGCTCAG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGCCACTGAGCAAAACTaGGTGGTCTGGCACCACTCC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKATEQN*VVWHHS
Trigger: GGAGTGGTGCCAGACCACCCAGTTTTGCTCAGTGGC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTTGTATGCCCAGCCACTTTATCTaGCATGGGTCTTACTTGCCG +
Preference number: 4 (lower is better)
Translates to: SSEEEIISRIHTEHSFCMPSHFI*HGSYLP
Trigger: CGGCAAGTAAGACCCATGTCAGATAAAGTGGCTGGG...CATACAAAAGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCTTCTGCAACAGGTGTaGGAGGGCCAGGCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNLLQQV*EGQARR
Trigger: CCTCCTTGCCTGGCCCTCTCACACCTGTTGCAGAAG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACATGTGTGGCCCTCTTaGTCTTGTCTCCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKHVWPS*SCLPRH
Trigger: GTGCCTTGGGAGACAAGAGCAAGAGGGCCACACATG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGGCGTTGGTAAGGCCTaGACTCTCGCCACAGGAATT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKGVGKA*TLATGI
Trigger: AATTCCTGTGGCGAGAGTCCAGGCCTTACCAACGCC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CCTTTTGATCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTATTCCATCTGAGTGGTaGTTCTCCTTCGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PFDPVKRRSSVESTQSTAIPSEW*FSFGPC
Trigger: ACAAGGCCCGAAGGAGAACCACCACTCAGATGGAAT...AGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGATCAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACCCATTGACAGGAAGTaGTCTAGCAGGTATCGGGCT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKPIDRK*SSRYRA
Trigger: AGCCCGATACCTGCTAGATCACTTCCTGTCAATGGG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATCTTTCTGGGCAGCCTaGAGACCCTTATTGATGCCC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKSFWAA*RPLLMP
Trigger: GGGCATCAATAAGGGTCTTCAGGCTGCCCAGAAAGA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATGTTTCGACAGCAGCTaGACTGGAACCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKCFDSS*TGTCVL
Trigger: CAGGACACAGGTTCCAGTGCAGCTGCTGTCGAAACA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACTGCGCTCAAGGAGCTaGCACTTCATGCGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKLRSRS*HFMRAV
Trigger: GACAGCTCGCATGAAGTGGCAGCTCCTTGAGCGCAG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCTGCGCTCAAGGAGCTaGCACTTCATGCGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNLRSRS*HFMRAV
Trigger: GACAGCTCGCATGAAGTGGCAGCTCCTTGAGCGCAG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGATCTGAAGACAGCGTaGTTCCTTCTGATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKDLKTA*FLLILG
Trigger: GCCCAGGATCAGAAGGAAGCACGCTGTCTTCAGATC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAAATCTCTTGCCCTTCTaGAACAGGTGTGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKNLLPF*NRCERA
Trigger: GGCCCTCTCACACCTGTTGCAGAAGGGCAAGAGATT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCAAAACTGGGTGGTCTaGCACCACTCCCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNQNWVV*HHSQGT
Trigger: TGTGCCCTGGGAGTGGTGCCAGACCACCCAGTTTTG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACTGAGCAAAACTGGGTaGTCTGGCACCACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKLSKTG*SGTTPR
Trigger: CCTGGGAGTGGTGCCAGACCACCCAGTTTTGCTCAG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGCCACTGAGCAAAACTaGGTGGTCTGGCACCACTCC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKATEQN*VVWHHS
Trigger: GGAGTGGTGCCAGACCACCCAGTTTTGCTCAGTGGC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTCCCTAGGAAGACCTaGGGCTCTCCTGGTGTGACA +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNFPRKT*GSPGVT
Trigger: TGTCACACCAGGAGAGCCTCAGGTCTTCCTAGGGAA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAAGCAGGTGCATCAGATaGACTCAGCTTCCGAGTAAC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKSRCIR*TQLPSN
Trigger: GTTACTCGGAAGCTGAGTTCATCTGATGCACCTGCT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACTGGGCTCCTGTCCTTaGTGCATCTGTTTCGACAGC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKLGSCP*CICFDS
Trigger: GCTGTCGAAACAGATGCATCAAGGACAGGAGCCCAG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTTGTATGAAGCTTCATGAGATCTaGAGACAGCGTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSEEEIISRIHTEHSFCMKLHEI*RQRASF
Trigger: GAAGGAAGCACGCTGTCTTCAGATCTCATGAAGCTT...CATACAAAAGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACACCACAAAGCTTCATaGGATCTGAAGACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKHHKAS*DLKTAC
Trigger: GCACGCTGTCTTCAGATCTCATGAAGCTTTGTGGTG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCTTCTGCAACAGGTGTaGGAGGGCCAGGCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSLLQQV*EGQARR
Trigger: CCTCCTTGCCTGGCCCTCTCACACCTGTTGCAGAAG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AAATTAATTCTGGAACAAAAGGTAGCAGATGGGATACTGAATGGAAAACAATGGCTTCTGCAACAGGTGTaGGAGGGCCAGGCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: KLILEQKVADGILNGKQWLLQQV*EGQARR
Trigger: CCTCCTTGCCTGGCCCTCTCACACCTGTTGCAGAAG...CCATTGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGTTCCAGAATTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCTTCTGCAACAGGTGTaGGAGGGCCAGGCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHLLQQV*EGQARR
Trigger: CCTCCTTGCCTGGCCCTCTCACACCTGTTGCAGAAG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAAAGCAGGAAATGGGTTaGTTATGCCCCTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKKQEMG*LCPFWR
Trigger: CCTCCAGAAGGGGCATAATCAACCCATTTCCTGCTT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCATGTGTGGCCCTCTTaGTCTTGTCTCCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNHVWPS*SCLPRH
Trigger: GTGCCTTGGGAGACAAGAGCAAGAGGGCCACACATG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACAGCATAGAGGAAGGTaGCAGTTGGGTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKQHRGR*QLGLGQ
Trigger: TTGCCCTAAACCCAACTGGCACCTTCCTCTATGCTG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACCCTTCTGGAGGATCTaGTGTGTACCTCCGAGAGAG +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKPFWRI*CVPPRE
Trigger: CTCTCTCGGAGGTACACAGCAGATCCTCCAGAAGGG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTGTTGGGCGACTGAATaGAAAGGTGGCGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSCWATE*KGGGGA
Trigger: AGCGCCGCCGCCACCTTTCCATTCAGTCGCCCAACA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361961.7
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATGTGAACGAGAGCTCTaGACATTCATCTGGGTACTG +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKCEREL*TFIWVL
Trigger: CAGTACCCAGATGAATGTTCAGAGCTCTCGTTCACA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACTGTTTTGTACTCCATaGGCTCCATCTGAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKLFCTP*APSEVV
Trigger: CACGACTTCAGATGGAGCTCATGGAGTACAAAACAG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAACCGAGCCTAAGTTTTaGAGCACCTGGTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKTEPKF*STWSLS
Trigger: TGAAAGAGACCAGGTGCTTCAAAACTTAGGCTCGGT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACCCAGCCACTTTATCTaGCATGGGTCTTACTTGCCG +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKPSHFI*HGSYLP
Trigger: CGGCAAGTAAGACCCATGTCAGATAAAGTGGCTGGG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCCCAGCCACTTTATCTaGCATGGGTCTTACTTGCCG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNPSHFI*HGSYLP
Trigger: CGGCAAGTAAGACCCATGTCAGATAAAGTGGCTGGG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTTGTATGCCTCTCCATTCTCCTTaGCTATCTTCTCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SSEEEIISRIHTEHSFCMPLHSP*LSSPFF
Trigger: AAAGAAGGGAGAAGATAGTCAAGGAGAATGGAGAGG...CATACAAAAGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACCCATTGACAGGAAGTaGTCTAGCAGGTATCGGGCT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKPIDRK*SSRYRA
Trigger: AGCCCGATACCTGCTAGATCACTTCCTGTCAATGGG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACCTGAAGACCCTTATTaGTGCCCATTGACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKPEDPY*CPLTGS
Trigger: ACTTCCTGTCAATGGGCATCAATAAGGGTCTTCAGG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATCTTTCTGGGCAGCCTaGAGACCCTTATTGATGCCC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKSFWAA*RPLLMP
Trigger: GGGCATCAATAAGGGTCTTCAGGCTGCCCAGAAAGA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAAAGCTTCATGAGATCTaGAGACAGCGTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKKLHEI*RQRASF
Trigger: GAAGGAAGCACGCTGTCTTCAGATCTCATGAAGCTT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGACATGGGTCTTACTTaGCGACGAAGAGCCGTAACC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNDMGLT*RRRAVT
Trigger: GGTTACGGCTCTTCGTCGGCAAGTAAGACCCATGTC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGACATGGGTCTTACTTaGCGACGAAGAGCCGTAACC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKDMGLT*RRRAVT
Trigger: GGTTACGGCTCTTCGTCGGCAAGTAAGACCCATGTC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTGTTTCGACAGCAGCTaGACTGGAACCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNCFDSS*TGTCVL
Trigger: CAGGACACAGGTTCCAGTGCAGCTGCTGTCGAAACA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCTGCGCTCAAGGAGCTaGCACTTCATGCGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSLRSRS*HFMRAV
Trigger: GACAGCTCGCATGAAGTGGCAGCTCCTTGAGCGCAG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACCTGCGCTCAAGGAGCTaGCACTTCATGCGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHLRSRS*HFMRAV
Trigger: GACAGCTCGCATGAAGTGGCAGCTCCTTGAGCGCAG...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGATCTGAAGACAGCGTaGTTCCTTCTGATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNDLKTA*FLLILG
Trigger: GCCCAGGATCAGAAGGAAGCACGCTGTCTTCAGATC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACATTCATCTGGGTACTaGCAGTTGTCCGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKHSSGY*QLSGIK
Trigger: CTTTATCCCGGACAACTGCCAGTACCCAGATGAATG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGCAATTCCATCTGAGTaGTGGTTCTCCTTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKAIPSE*WFSFGP
Trigger: AGGCCCGAAGGAGAACCACCACTCAGATGGAATTGC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGCAATTCCATCTGAGTaGTGGTTCTCCTTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNAIPSE*WFSFGP
Trigger: AGGCCCGAAGGAGAACCACCACTCAGATGGAATTGC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGTTCAAAATTGTGGGTaGGACTCACAGTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKVQNCG*DSQSQE
Trigger: CTCTTGGGACTGTGAGTCCCACCCACAATTTTGAAC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGGGGGTTCAAAATTGTaGGTGGGACTCACAGTCCCA +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKGGSKL*VGLTVP
Trigger: TGGGACTGTGAGTCCCACCCACAATTTTGAACCCCC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCAAAACTGGGTGGTCTaGCACCACTCCCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSQNWVV*HHSQGT
Trigger: TGTGCCCTGGGAGTGGTGCCAGACCACCCAGTTTTG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCAAAACTGGGTGGTCTaGCACCACTCCCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHQNWVV*HHSQGT
Trigger: TGTGCCCTGGGAGTGGTGCCAGACCACCCAGTTTTG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCAAAACTGGGTGGTCTaGCACCACTCCCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCQNWVV*HHSQGT
Trigger: TGTGCCCTGGGAGTGGTGCCAGACCACCCAGTTTTG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCTGAGCAAAACTGGGTaGTCTGGCACCACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSLSKTG*SGTTPR
Trigger: CCTGGGAGTGGTGCCAGACCACCCAGTTTTGCTCAG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGCCACTGAGCAAAACTaGGTGGTCTGGCACCACTCC +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCATEQN*VVWHHS
Trigger: GGAGTGGTGCCAGACCACCCAGTTTTGCTCAGTGGC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGCCACTGAGCAAAACTaGGTGGTCTGGCACCACTCC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHATEQN*VVWHHS
Trigger: GGAGTGGTGCCAGACCACCCAGTTTTGCTCAGTGGC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTTCCCTAGGAAGACCTaGGGCTCTCCTGGTGTGACA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHFPRKT*GSPGVT
Trigger: TGTCACACCAGGAGAGCCTCAGGTCTTCCTAGGGAA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACCATCTGAAGTCGTGTaGTTTCACTACGAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKPSEVV*FHYEVH
Trigger: ATGCACTTCGTAGTGAAATCACACGACTTCAGATGG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATCCATGAGCTCCATCTaGAGTCGTGTGATTTCACTA +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKSMSSI*SRVISL
Trigger: TAGTGAAATCACACGACTTCAGATGGAGCTCATGGA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAGCAGGTGCATCAGATaGACTCAGCTTCCGAGTAAC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKSRCIR*TQLPSN
Trigger: GTTACTCGGAAGCTGAGTTCATCTGATGCACCTGCT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATAGCAGGTGCATCAGATaGACTCAGCTTCCGAGTAAC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNSRCIR*TQLPSN
Trigger: GTTACTCGGAAGCTGAGTTCATCTGATGCACCTGCT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCTGGGCTCCTGTCCTTaGTGCATCTGTTTCGACAGC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSLGSCP*CICFDS
Trigger: GCTGTCGAAACAGATGCATCAAGGACAGGAGCCCAG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCTGGGCTCCTGTCCTTaGTGCATCTGTTTCGACAGC +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCLGSCP*CICFDS
Trigger: GCTGTCGAAACAGATGCATCAAGGACAGGAGCCCAG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACCTGGGCTCCTGTCCTTaGTGCATCTGTTTCGACAGC +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHLGSCP*CICFDS
Trigger: GCTGTCGAAACAGATGCATCAAGGACAGGAGCCCAG...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACCTCTCCATTCTCCTTaGCTATCTTCTCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKPLHSP*LSSPFF
Trigger: AAAGAAGGGAGAAGATAGTCAAGGAGAATGGAGAGG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATACAGCAATTCCATCTaGGTGGTGGTTCTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKYSNSI*VVVLLR
Trigger: CCGAAGGAGAACCACCACTCAGATGGAATTGCTGTA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACTTATCCTGCTGAACTaGTGTGTTTCCCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKLILLN*CVSLRN
Trigger: GTTTCTCAGGGAAACACATCAGTTCAGCAGGATAAG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATAAGCAGGAAATGGGTTaGTTATGCCCCTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNKQEMG*LCPFWR
Trigger: CCTCCAGAAGGGGCATAATCAACCCATTTCCTGCTT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAAGCAGGAAATGGGTTaGTTATGCCCCTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKKQEMG*LCPFWR
Trigger: CCTCCAGAAGGGGCATAATCAACCCATTTCCTGCTT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATCGAATGCACTTTGCTaGATCTCTGATATCCCACAC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKSNALC*ISDIPH
Trigger: GTGTGGGATATCAGAGATTCAGCAAAGTGCATTCGA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGGGTTTAGGGCAATTTaGTTGATCTGGTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKGFRAI*LIWFSP
Trigger: TGGAGAGAACCAGATCAATCAAATTGCCCTAAACCC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATGTCCACTGGAAATCTaGTCCACAGTAAGGCACATA +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKCPLEI*STVRHI
Trigger: TATGTGCCTTACTGTGGATCAGATTTCCAGTGGACA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCATGTGTGGCCCTCTTaGTCTTGTCTCCCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSHVWPS*SCLPRH
Trigger: GTGCCTTGGGAGACAAGAGCAAGAGGGCCACACATG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACTCATTTCCTTCACCTaGTCTGGCAAGAACATGGTT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKLISFT*SGKNMV
Trigger: AACCATGTTCTTGCCAGAGCAGGTGAAGGAAATGAG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGAAATATGGCGCTCTTaGTGTGGCTCTTGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKEIWRS*CGSCQV
Trigger: AACTTGACAAGAGCCACAGCAAGAGCGCCATATTTC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp AATTACATAGGCCACCTCAAGCACATGCAAGAAAGTTCTGCCATCATTAAAATTTGTTTCGACAGCAGCTaGACTGGAACCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: NYIGHLKHMQESSAIIKICFDSS*TGTCVL
Trigger: CAGGACACAGGTTCCAGTGCAGCTGCTGTCGAAACA...AATTTTAATGATGGCAGAACTTTCTTGCATGTGCTTGAGGTGGCCTATGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGGAATTCTCATTTTCTaGTGGGCTCCTGTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKGILIF*WAPVLD
Trigger: ATCAAGGACAGGAGCCCAGCAGAAAATGAGAATTCC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCTTTTGATCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTCTGCTTTCTCATATaGCTTTCTCCTTGTTACAGG +
Preference number: 4 (lower is better)
Translates to: PFDPVKRRSSVESTQSTAFCFLI*LSPCYR
Trigger: CCTGTAACAAGGAGAAAGGCATATGAGAAAGCAGAA...AGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGATCAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATGTTCGACTGGTACTTaGAGAACAAGCATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKCSTGT*RTSISK
Trigger: CTTGGAGATGCTTGTTCTGCAAGTACCAGTCGAACA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACAGCATAGAGGAAGGTaGCAGTTGGGTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKQHRGR*QLGLGQ
Trigger: TTGCCCTAAACCCAACTGGCACCTTCCTCTATGCTG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGCGCTCCAGCCATGTTaGGCGACTGAATGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSALQPC*ATEWKG
Trigger: ACCTTTCCATTCAGTCGCCCAACATGGCTGGAGCGC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361961.7
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTATAGGGGACATGTGTaGCCCTCTTGCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNYRGHV*PSCSCL
Trigger: GAGACAAGAGCAAGAGGGCCACACATGTCCCCTATA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACCACTTTATCTGACATaGGTCTTACTTGCCGACGAA +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKPLYLT*VLLADE
Trigger: TTCGTCGGCAAGTAAGACCCATGTCAGATAAAGTGG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAATTCTCATTTTCTGCTaGGCTCCTGTCCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKILIFC*APVLDA
Trigger: TGCATCAAGGACAGGAGCCCAGCAGAAAATGAGAAT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGGCGTTGGTAAGGCCTaGACTCTCGCCACAGGAATT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHGVGKA*TLATGI
Trigger: AATTCCTGTGGCGAGAGTCCAGGCCTTACCAACGCC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp AAATTAATTCTGGAACAAAAGGTAGCAGATGGGATACTGAATGGAAAACAATGGGGCGTTGGTAAGGCCTaGACTCTCGCCACAGGAATT +
Preference number: 4 (lower is better)
Translates to: KLILEQKVADGILNGKQWGVGKA*TLATGI
Trigger: AATTCCTGTGGCGAGAGTCCAGGCCTTACCAACGCC...CCATTGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGTTCCAGAATTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGGCGTTGGTAAGGCCTaGACTCTCGCCACAGGAATT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSGVGKA*TLATGI
Trigger: AATTCCTGTGGCGAGAGTCCAGGCCTTACCAACGCC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAATTCCATCTGAGTGGTaGTTCTCCTTCGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKIPSEW*FSFGPC
Trigger: ACAAGGCCCGAAGGAGAACCACCACTCAGATGGAAT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATATTCCATCTGAGTGGTaGTTCTCCTTCGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNIPSEW*FSFGPC
Trigger: ACAAGGCCCGAAGGAGAACCACCACTCAGATGGAAT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CCTTTTGATCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTACACACAGGACTATGTaGGAAAATCTTTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PFDPVKRRSSVESTQSTATHRTM*ENLSLS
Trigger: GGACAAAGAAAGATTTTCCCACATAGTCCTGTGTGT...AGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGATCAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
3UTR CAA 72 bp GGAACTGAATCTGGATTCCAGGCCACAGATTTAGTCTaGAAGTTCCAAAAGTCTCACTCATCTGACAGACTA +
Preference number: 4 (lower is better)
Translates to: GTESGFQATDLV*KFQKSHSSDRL
Trigger: TAGTCTGTCAGATGAGTGAGACTTTTGGAACTTCAAGACTAAATCTGTGGCCTGGAATCCAGATTCAGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTGTGAACGAGAGCTCTaGACATTCATCTGGGTACTG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNCEREL*TFIWVL
Trigger: CAGTACCCAGATGAATGTTCAGAGCTCTCGTTCACA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGGTAAAAATGGCATGTaGACGAGAGCTCTGAACATT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKGKNGM*TRALNI
Trigger: AATGTTCAGAGCTCTCGTTCACATGCCATTTTTACC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCTGTTTTGTACTCCATaGGCTCCATCTGAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNLFCTP*APSEVV
Trigger: CACGACTTCAGATGGAGCTCATGGAGTACAAAACAG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATAAGTTGATGATCCGCTaGAATATGGCGCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNKLMIR*NMALLL
Trigger: CAGCAAGAGCGCCATATTTCAGCGGATCATCAACTT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAAGTTGATGATCCGCTaGAATATGGCGCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKKLMIR*NMALLL
Trigger: CAGCAAGAGCGCCATATTTCAGCGGATCATCAACTT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAACCGAGCCTAAGTTTTaGAGCACCTGGTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKTEPKF*STWSLS
Trigger: TGAAAGAGACCAGGTGCTTCAAAACTTAGGCTCGGT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCCCAGCCACTTTATCTaGCATGGGTCTTACTTGCCG +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCPSHFI*HGSYLP
Trigger: CGGCAAGTAAGACCCATGTCAGATAAAGTGGCTGGG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCCCAGCCACTTTATCTaGCATGGGTCTTACTTGCCG +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHPSHFI*HGSYLP
Trigger: CGGCAAGTAAGACCCATGTCAGATAAAGTGGCTGGG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATTACATAGGCCACCTCAAGCACATGCAAGAAAGTTCTGCCATCATTAAAATTAGCAGGTGCATCAGATaGACTCAGCTTCCGAGTAAC +
Preference number: 4 (lower is better)
Translates to: NYIGHLKHMQESSAIIKISRCIR*TQLPSN
Trigger: GTTACTCGGAAGCTGAGTTCATCTGATGCACCTGCT...AATTTTAATGATGGCAGAACTTTCTTGCATGTGCTTGAGGTGGCCTATGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp CCTTTTGATCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTCTTCTCCCTTCTTTTTaGAAGTTTCTCTCGTCTTTT +
Preference number: 4 (lower is better)
Translates to: PFDPVKRRSSVESTQSTALLPSF*KFLSSF
Trigger: AAAAGACGAGAGAAACTTTCAAAAAGAAGGGAGAAG...AGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGATCAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp TCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTTGTATGGATATTAGCAGTCAGTaGCTCCATCTCTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: SSEEEIISRIHTEHSFCMDISSQ*LHLFID
Trigger: ATCAATGAAGAGATGGAGTCACTGACTGCTAATATC...CATACAAAAGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp TCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTTGTATGTGCATTATGTTGGCCTaGCAATCAGAAATACTGTCA +
Preference number: 4 (lower is better)
Translates to: SSEEEIISRIHTEHSFCMCIMLA*QSEILS
Trigger: TGACAGTATTTCTGATTGTCAGGCCAACATAATGCA...CATACAAAAGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCCCATTGACAGGAAGTaGTCTAGCAGGTATCGGGCT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSPIDRK*SSRYRA
Trigger: AGCCCGATACCTGCTAGATCACTTCCTGTCAATGGG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AAATTAATTCTGGAACAAAAGGTAGCAGATGGGATACTGAATGGAAAACAATGGCCCATTGACAGGAAGTaGTCTAGCAGGTATCGGGCT +
Preference number: 4 (lower is better)
Translates to: KLILEQKVADGILNGKQWPIDRK*SSRYRA
Trigger: AGCCCGATACCTGCTAGATCACTTCCTGTCAATGGG...CCATTGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGTTCCAGAATTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCCCATTGACAGGAAGTaGTCTAGCAGGTATCGGGCT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCPIDRK*SSRYRA
Trigger: AGCCCGATACCTGCTAGATCACTTCCTGTCAATGGG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCCTGAAGACCCTTATTaGTGCCCATTGACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNPEDPY*CPLTGS
Trigger: ACTTCCTGTCAATGGGCATCAATAAGGGTCTTCAGG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTCTTTCTGGGCAGCCTaGAGACCCTTATTGATGCCC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHSFWAA*RPLLMP
Trigger: GGGCATCAATAAGGGTCTTCAGGCTGCCCAGAAAGA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTCTTTCTGGGCAGCCTaGAGACCCTTATTGATGCCC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSSFWAA*RPLLMP
Trigger: GGGCATCAATAAGGGTCTTCAGGCTGCCCAGAAAGA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACTCTTTCTGGGCAGCCTaGAGACCCTTATTGATGCCC +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHSFWAA*RPLLMP
Trigger: GGGCATCAATAAGGGTCTTCAGGCTGCCCAGAAAGA...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAAGCTTCATGAGATCTaGAGACAGCGTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKKLHEI*RQRASF
Trigger: GAAGGAAGCACGCTGTCTTCAGATCTCATGAAGCTT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAACAAGTACGATCTTTTaGTCCAGTGAAGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKTSTIF*SSEEEI
Trigger: GATCTCCTCTTCACTGGATCAAAAGATCGTACTTGT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATCTCCAAGAGTAACTTaGCCTGAAGACGTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKSPRVT*PEDVSV
Trigger: AACACTAACGTCTTCAGGTCAAGTTACTCTTGGAGA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCCTGTGTCAGAGATCTaGCCATCTTGCAAATTGCGA +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNPVSEI*PSCKLR
Trigger: TCGCAATTTGCAAGATGGTCAGATCTCTGACACAGG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACCTGTGTCAGAGATCTaGCCATCTTGCAAATTGCGA +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKPVSEI*PSCKLR
Trigger: TCGCAATTTGCAAGATGGTCAGATCTCTGACACAGG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATCCAGGTGTGTTTTCTaGCTGTCACAAAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKSRCVF*LSQKQT
Trigger: CGTCTGCTTTTGTGACAGTCAGAAAACACACCTGGA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCTTTTGATCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTAGTTCCTAAAATCTaGCCTCAGTTCTACATCACT +
Preference number: 4 (lower is better)
Translates to: PFDPVKRRSSVESTQSTALVPKI*PQFYIT
Trigger: AGTGATGTAGAACTGAGGTCAGATTTTAGGAACTAA...AGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGATCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAAGCAGGAAATGGGTTaGTTATGCCCCTGTGTACCT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKKQEMG*LCPCVP
Trigger: AGGTACACAGGGGCATAATCAACCCATTTCCTGCTT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000552961.5
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAAGGCACTTATTACATTaGCAAGTGCCAAAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKRHLLH*QVPKVH
Trigger: GTGGACTTTTGGCACTTGGCAATGTAATAAGTGCCT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAAATTCTGGACCTCAATaGATCAACCGTCTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKNSGPQ*INRLLH
Trigger: ATGCAAGAGACGGTTGATGCATTGAGGTCCAGAATT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp AAATTAATTCTGGAACAAAAGGTAGCAGATGGGATACTGAATGGAAAACAATGGGACATGGGTCTTACTTaGCGACGAAGAGCCGTAACC +
Preference number: 4 (lower is better)
Translates to: KLILEQKVADGILNGKQWDMGLT*RRRAVT
Trigger: GGTTACGGCTCTTCGTCGGCAAGTAAGACCCATGTC...CCATTGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGTTCCAGAATTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTGTTTCGACAGCAGCTaGACTGGAACCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCCFDSS*TGTCVL
Trigger: CAGGACACAGGTTCCAGTGCAGCTGCTGTCGAAACA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGAAATGGTCATCTTCTaGATGATGATGTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKEMVIF*MMMSVT
Trigger: GGTCACAGACATCATCATGCAGAAGATGACCATTTC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTTGTATGGAGTCTATTCATATCTaGCTCCATGTTGGAAATGGT +
Preference number: 4 (lower is better)
Translates to: SSEEEIISRIHTEHSFCMESIHI*LHVGNG
Trigger: ACCATTTCCAACATGGAGGCAGATATGAATAGACTC...CATACAAAAGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR GCA 90 bp CATACACACACAGGACTATGTGGGAAAATCTTTCTTTGTCCTCAAGATAATAATGATCTGAAGACAGCGTaGTTCCTTCTGATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HTHTGLCGKIFLCPQDNNDLKTA*FLLILG
Trigger: GCCCAGGATCAGAAGGAAGCACGCTGTCTTCAGATC...ATTATTATCTTGAGGACAAAGAAAGATTTTCCCACATAGTCCTGTGTGTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGATCTGAAGACAGCGTaGTTCCTTCTGATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSDLKTA*FLLILG
Trigger: GCCCAGGATCAGAAGGAAGCACGCTGTCTTCAGATC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGATCTGAAGACAGCGTaGTTCCTTCTGATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHDLKTA*FLLILG
Trigger: GCCCAGGATCAGAAGGAAGCACGCTGTCTTCAGATC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTAATCTCTTGCCCTTCTaGAACAGGTGTGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCNLLPF*NRCERA
Trigger: GGCCCTCTCACACCTGTTGCAGAAGGGCAAGAGATT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAATCTCTTGCCCTTCTaGAACAGGTGTGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSNLLPF*NRCERA
Trigger: GGCCCTCTCACACCTGTTGCAGAAGGGCAAGAGATT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATAATCTCTTGCCCTTCTaGAACAGGTGTGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHNLLPF*NRCERA
Trigger: GGCCCTCTCACACCTGTTGCAGAAGGGCAAGAGATT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAAGTGACATTATTTCCTaGCCAGTCACCAGATTCCAT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKSDIIS*PVTRFH
Trigger: ATGGAATCTGGTGACTGGGCAGGAAATAATGTCACT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGACCCAATCCTTATGTaGATTTGGAACTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKDPILM*IWNLLK
Trigger: CTTCAGCAAGTTCCAAATGCACATAAGGATTGGGTC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGAGTTAATGGTGGGCTaGATCGTATTCCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNELMVG*IVFQVC
Trigger: ACACACCTGGAATACGATGCAGCCCACCATTAACTC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTTGTATGGGCAATATTCCTCAGTaGAGAGATGTATTCATTCCA +
Preference number: 4 (lower is better)
Translates to: SSEEEIISRIHTEHSFCMGNIPQ*RDVFIP
Trigger: TGGAATGAATACATCTCTGCACTGAGGAATATTGCC...CATACAAAAGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CCA 90 bp TCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTTGTATGCCATCTGCATTATGTTaGCCTGACAATCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: SSEEEIISRIHTEHSFCMPSALC*PDNQKY
Trigger: GTATTTCTGATTGTCAGGCCAACATAATGCAGATGG...CATACAAAAGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGCAATTCCATCTGAGTaGTGGTTCTCCTTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHAIPSE*WFSFGP
Trigger: AGGCCCGAAGGAGAACCACCACTCAGATGGAATTGC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp AAATTAATTCTGGAACAAAAGGTAGCAGATGGGATACTGAATGGAAAACAATGGGCAATTCCATCTGAGTaGTGGTTCTCCTTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: KLILEQKVADGILNGKQWAIPSE*WFSFGP
Trigger: AGGCCCGAAGGAGAACCACCACTCAGATGGAATTGC...CCATTGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGTTCCAGAATTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGCAATTCCATCTGAGTaGTGGTTCTCCTTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSAIPSE*WFSFGP
Trigger: AGGCCCGAAGGAGAACCACCACTCAGATGGAATTGC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGCAATTCCATCTGAGTaGTGGTTCTCCTTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCAIPSE*WFSFGP
Trigger: AGGCCCGAAGGAGAACCACCACTCAGATGGAATTGC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGGGGGTTCAAAATTGTaGGTGGGACTCACAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSGGSKL*VGLTVP
Trigger: TGGGACTGTGAGTCCCACCCACAATTTTGAACCCCC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGGGGGTTCAAAATTGTaGGTGGGACTCACAGTCCCA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHGGSKL*VGLTVP
Trigger: TGGGACTGTGAGTCCCACCCACAATTTTGAACCCCC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGGGGGTTCAAAATTGTaGGTGGGACTCACAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCGGSKL*VGLTVP
Trigger: TGGGACTGTGAGTCCCACCCACAATTTTGAACCCCC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CCTTTTGATCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTACAAAAGGTAGCAGATaGGATACTGAATGGAAAACA +
Preference number: 4 (lower is better)
Translates to: PFDPVKRRSSVESTQSTATKGSR*DTEWKT
Trigger: TGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGT...AGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGATCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTCCATGAGCTCCATCTaGAGTCGTGTGATTTCACTA +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNSMSSI*SRVISL
Trigger: TAGTGAAATCACACGACTTCAGATGGAGCTCATGGA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATGGTCTCTTTCAAGCTaGGTATCCCGAATTTTATGT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKWSLSS*VSRILC
Trigger: ACATAAAATTCGGGATACTCAGCTTGAAAGAGACCA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTAGCAGGTGCATCAGATaGACTCAGCTTCCGAGTAAC +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCSRCIR*TQLPSN
Trigger: GTTACTCGGAAGCTGAGTTCATCTGATGCACCTGCT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGATATTAGCAGTCAGTaGCTCCATCTCTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKDISSQ*LHLFID
Trigger: ATCAATGAAGAGATGGAGTCACTGACTGCTAATATC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATGCATTATGTTGGCCTaGCAATCAGAAATACTGTCA +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKCIMLA*QSEILS
Trigger: TGACAGTATTTCTGATTGTCAGGCCAACATAATGCA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCACCACAAAGCTTCATaGGATCTGAAGACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHHHKAS*DLKTAC
Trigger: GCACGCTGTCTTCAGATCTCATGAAGCTTTGTGGTG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACCACCACAAAGCTTCATaGGATCTGAAGACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHHHKAS*DLKTAC
Trigger: GCACGCTGTCTTCAGATCTCATGAAGCTTTGTGGTG...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCACCACAAAGCTTCATaGGATCTGAAGACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCHHKAS*DLKTAC
Trigger: GCACGCTGTCTTCAGATCTCATGAAGCTTTGTGGTG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCACCACAAAGCTTCATaGGATCTGAAGACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSHHKAS*DLKTAC
Trigger: GCACGCTGTCTTCAGATCTCATGAAGCTTTGTGGTG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTACAGCAATTCCATCTaGGTGGTGGTTCTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSYSNSI*VVVLLR
Trigger: CCGAAGGAGAACCACCACTCAGATGGAATTGCTGTA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACTACAGCAATTCCATCTaGGTGGTGGTTCTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHYSNSI*VVVLLR
Trigger: CCGAAGGAGAACCACCACTCAGATGGAATTGCTGTA...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTACAGCAATTCCATCTaGGTGGTGGTTCTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCYSNSI*VVVLLR
Trigger: CCGAAGGAGAACCACCACTCAGATGGAATTGCTGTA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTCGAATGCACTTTGCTaGATCTCTGATATCCCACAC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNSNALC*ISDIPH
Trigger: GTGTGGGATATCAGAGATTCAGCAAAGTGCATTCGA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGGGTTTAGGGCAATTTaGTTGATCTGGTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNGFRAI*LIWFSP
Trigger: TGGAGAGAACCAGATCAATCAAATTGCCCTAAACCC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTGTCCACTGGAAATCTaGTCCACAGTAAGGCACATA +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNCPLEI*STVRHI
Trigger: TATGTGCCTTACTGTGGATCAGATTTCCAGTGGACA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGATAGGACTATCATaGCCCTTCATCTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNLIGLS*PFISPT
Trigger: AGTGGGAGAGATGAAGGGTCATGATAGTCCTATCAA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATTGATAGGACTATCATaGCCCTTCATCTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKLIGLS*PFISPT
Trigger: AGTGGGAGAGATGAAGGGTCATGATAGTCCTATCAA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACAGTCTTTCAGATCCTaGGAGATCAACAAAATGGAA +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKQSFRS*EINKME
Trigger: TTCCATTTTGTTGATCTCGCAGGATCTGAAAGACTG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGATTTCACTACGAAGTaGATTGATTTGCTGACTAGC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKDFTTK*IDLLTS
Trigger: GCTAGTCAGCAAATCAATGCACTTCGTAGTGAAATC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGCATCAACCGTCTCTTaGATGGCTTTAATTCTTACA +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKASTVS*MALILT
Trigger: TGTAAGAATTAAAGCCATGCAAGAGACGGTTGATGC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACTCATTTCCTTCACCTaGTCTGGCAAGAACATGGTT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKLISFT*SGKNMV
Trigger: AACCATGTTCTTGCCAGAGCAGGTGAAGGAAATGAG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGGAATTCTCATTTTCTaGTGGGCTCCTGTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNGILIF*WAPVLD
Trigger: ATCAAGGACAGGAGCCCAGCAGAAAATGAGAATTCC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGAGTCTATTCATATCTaGCTCCATGTTGGAAATGGT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKESIHI*LHVGNG
Trigger: ACCATTTCCAACATGGAGGCAGATATGAATAGACTC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACTGAAGCTAGTTCACTaGTATCTGCATACAGCAATT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKLKLVH*YLHTAI
Trigger: AATTGCTGTATGCAGATAGCAGTGAACTAGCTTCAG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATCTGATAGAGATGACTaGCTGGAAATGCTGCCTATC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKSDRDD*LEMLPI
Trigger: GATAGGCAGCATTTCCAGGCAGTCATCTCTATCAGA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTCTGATAGAGATGACTaGCTGGAAATGCTGCCTATC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNSDRDD*LEMLPI
Trigger: GATAGGCAGCATTTCCAGGCAGTCATCTCTATCAGA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATTCTGCTTTCTCATATaGCTTTCTCCTTGTTACAGG +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKFCFLI*LSPCYR
Trigger: CCTGTAACAAGGAGAAAGGCATATGAGAAAGCAGAA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTGTTCGACTGGTACTTaGAGAACAAGCATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNCSTGT*RTSISK
Trigger: CTTGGAGATGCTTGTTCTGCAAGTACCAGTCGAACA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATGTTCGACTGGTACTTaGAGAACAAGCATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKCSTGT*RTSISK
Trigger: CTTGGAGATGCTTGTTCTGCAAGTACCAGTCGAACA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCAGCATAGAGGAAGGTaGCAGTTGGGTTTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHQHRGR*QLGLGQ
Trigger: TTGCCCTAAACCCAACTGGCACCTTCCTCTATGCTG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACTTCAATCTTCTCTTTaGCAAGCTGTGGTCTTATTC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKLQSSL*QAVVLF
Trigger: GAATAAGACCACAGCTTGCCAAAGAGAAGATTGAAG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTTGGGGACACACTCTaGTTTGACACACATGAATGG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNFGDTL*FDTHEW
Trigger: CCATTCATGTGTGTCAAACCAGAGTGTGTCCCCAAA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTATAGGGGACATGTGTaGCCCTCTTGCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCYRGHV*PSCSCL
Trigger: GAGACAAGAGCAAGAGGGCCACACATGTCCCCTATA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTATAGGGGACATGTGTaGCCCTCTTGCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSYRGHV*PSCSCL
Trigger: GAGACAAGAGCAAGAGGGCCACACATGTCCCCTATA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGTAGTCTTGTTAGCTTaGAATCTCTATAGGGGACAT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKVVLLA*NLYRGH
Trigger: ATGTCCCCTATAGAGATTCCAAGCTAACAAGACTAC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGTCTGCAGTCTTTTCTaGCTGTTTTCTAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKVCSLF*LFSSSS
Trigger: TGATGAACTAGAAAACAGCCAGAAAAGACTGCAGAC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAATTCTCATTTTCTGCTaGGCTCCTGTCCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKILIFC*APVLDA
Trigger: TGCATCAAGGACAGGAGCCCAGCAGAAAATGAGAAT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACCATCTGCATTATGTTaGCCTGACAATCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKPSALC*PDNQKY
Trigger: GTATTTCTGATTGTCAGGCCAACATAATGCAGATGG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAAGATCTTGTAAAGCATaGCCTAGTAAAGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKRSCKA*PSKASS
Trigger: GCTAGATGCTTTACTAGGCCATGCTTTACAAGATCT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTATTCCATCTGAGTGGTaGTTCTCCTTCGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCIPSEW*FSFGPC
Trigger: ACAAGGCCCGAAGGAGAACCACCACTCAGATGGAAT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTATTCCATCTGAGTGGTaGTTCTCCTTCGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSIPSEW*FSFGPC
Trigger: ACAAGGCCCGAAGGAGAACCACCACTCAGATGGAAT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATACACTGCATCATCTCTaGTTCTGTATTCACAGTACG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNTLHHL*FCIHST
Trigger: CGTACTGTGAATACAGAATCAGAGATGATGCAGTGT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGGTAAAAATGGCATGTaGACGAGAGCTCTGAACATT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNGKNGM*TRALNI
Trigger: AATGTTCAGAGCTCTCGTTCACATGCCATTTTTACC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCTGTTTTGTACTCCATaGGCTCCATCTGAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSLFCTP*APSEVV
Trigger: CACGACTTCAGATGGAGCTCATGGAGTACAAAACAG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATAAGTTGATGATCCGCTaGAATATGGCGCTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHKLMIR*NMALLL
Trigger: CAGCAAGAGCGCCATATTTCAGCGGATCATCAACTT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCCTGAAGACCCTTATTaGTGCCCATTGACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCPEDPY*CPLTGS
Trigger: ACTTCCTGTCAATGGGCATCAATAAGGGTCTTCAGG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACCCTGAAGACCCTTATTaGTGCCCATTGACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHPEDPY*CPLTGS
Trigger: ACTTCCTGTCAATGGGCATCAATAAGGGTCTTCAGG...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCCTGAAGACCCTTATTaGTGCCCATTGACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSPEDPY*CPLTGS
Trigger: ACTTCCTGTCAATGGGCATCAATAAGGGTCTTCAGG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTCCAGTACTTTAATTTaGGCCTCTTTCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCSSTLI*ASFWAA
Trigger: GGCTGCCCAGAAAGAGGCTCAAATTAAAGTACTGGA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTCCAGTACTTTAATTTaGGCCTCTTTCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHSSTLI*ASFWAA
Trigger: GGCTGCCCAGAAAGAGGCTCAAATTAAAGTACTGGA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CATACACACACAGGACTATGTGGGAAAATCTTTCTTTGTCCTCAAGATAATAATTCCAGTACTTTAATTTaGGCCTCTTTCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HTHTGLCGKIFLCPQDNNSSTLI*ASFWAA
Trigger: GGCTGCCCAGAAAGAGGCTCAAATTAAAGTACTGGA...ATTATTATCTTGAGGACAAAGAAAGATTTTCCCACATAGTCCTGTGTGTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTCCAGTACTTTAATTTaGGCCTCTTTCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSSSTLI*ASFWAA
Trigger: GGCTGCCCAGAAAGAGGCTCAAATTAAAGTACTGGA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATAAGCTTCATGAGATCTaGAGACAGCGTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHKLHEI*RQRASF
Trigger: GAAGGAAGCACGCTGTCTTCAGATCTCATGAAGCTT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAAGCTTCATGAGATCTaGAGACAGCGTGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSKLHEI*RQRASF
Trigger: GAAGGAAGCACGCTGTCTTCAGATCTCATGAAGCTT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAACAAGTACGATCTTTTaGTCCAGTGAAGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKTSTIF*SSEEEI
Trigger: GATCTCCTCTTCACTGGATCAAAAGATCGTACTTGT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTCTCCAAGAGTAACTTaGCCTGAAGACGTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNSPRVT*PEDVSV
Trigger: AACACTAACGTCTTCAGGTCAAGTTACTCTTGGAGA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATTAGGGCAATTTGATTaGTCTGGTTCTCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKLGQFD*SGSLQK
Trigger: CTTCTGGAGAGAACCAGATCAATCAAATTGCCCTAA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCCTGTGTCAGAGATCTaGCCATCTTGCAAATTGCGA +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCPVSEI*PSCKLR
Trigger: TCGCAATTTGCAAGATGGTCAGATCTCTGACACAGG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCCTGTGTCAGAGATCTaGCCATCTTGCAAATTGCGA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHPVSEI*PSCKLR
Trigger: TCGCAATTTGCAAGATGGTCAGATCTCTGACACAGG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCCTGTGTCAGAGATCTaGCCATCTTGCAAATTGCGA +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSPVSEI*PSCKLR
Trigger: TCGCAATTTGCAAGATGGTCAGATCTCTGACACAGG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTCCAGGTGTGTTTTCTaGCTGTCACAAAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSSRCVF*LSQKQT
Trigger: CGTCTGCTTTTGTGACAGTCAGAAAACACACCTGGA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTCCAGGTGTGTTTTCTaGCTGTCACAAAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCSRCVF*LSQKQT
Trigger: CGTCTGCTTTTGTGACAGTCAGAAAACACACCTGGA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAAATAAACTACATGAATaGGTTAATGGTGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKNKLHE*VNGGLH
Trigger: ATGCAGCCCACCATTAACTCATTCATGTAGTTTATT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAAGCAGGAAATGGGTTaGTTATGCCCTGCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKKQEMG*LCPAFV
Trigger: AACAAAAGCAGGGCATAATCAACCCATTTCCTGCTT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000551264.5
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAGGCACTTATTACATTaGCAAGTGCCAAAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKRHLLH*QVPKVH
Trigger: GTGGACTTTTGGCACTTGGCAATGTAATAAGTGCCT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAATTCTGGACCTCAATaGATCAACCGTCTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKNSGPQ*INRLLH
Trigger: ATGCAAGAGACGGTTGATGCATTGAGGTCCAGAATT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGAAATGGTCATCTTCTaGATGATGATGTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKEMVIF*MMMSVT
Trigger: GGTCACAGACATCATCATGCAGAAGATGACCATTTC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGTTCCAGAATCTGAGTaGTTTTGTTCCTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKVPESE*FCSLAF
Trigger: AAAGGCCAAGGAACAAAAGCACTCAGATTCTGGAAC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAGTGACATTATTTCCTaGCCAGTCACCAGATTCCAT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKSDIIS*PVTRFH
Trigger: ATGGAATCTGGTGACTGGGCAGGAAATAATGTCACT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTGGTTAGTGCTTCTATaGCATCATAATGAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNWLVLL*HHNEGV
Trigger: AACCCCCTCATTATGATGGCATAGAAGCACTAACCA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATGGTTAGTGCTTCTATaGCATCATAATGAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKWLVLL*HHNEGV
Trigger: AACCCCCTCATTATGATGGCATAGAAGCACTAACCA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGACCCAATCCTTATGTaGATTTGGAACTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNDPILM*IWNLLK
Trigger: CTTCAGCAAGTTCCAAATGCACATAAGGATTGGGTC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAGTTCGATCATCAGCTaGAGTAAAAATGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKSSIIS*SKNVGG
Trigger: TCCACCCACATTTTTACTGCAGCTGATGATCGAACT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGACCATCTTGCAAATTaGGAGCCTTCCAAATTCTCA +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKDHLAN*EPSKFS
Trigger: TGAGAATTTGGAAGGCTCGCAATTTGCAAGATGGTC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGACCATCTTGCAAATTaGGAGCCTTCCAAATTCTCA +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNDHLAN*EPSKFS
Trigger: TGAGAATTTGGAAGGCTCGCAATTTGCAAGATGGTC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGAGTTAATGGTGGGCTaGATCGTATTCCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSELMVG*IVFQVC
Trigger: ACACACCTGGAATACGATGCAGCCCACCATTAACTC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGAGTTAATGGTGGGCTaGATCGTATTCCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCELMVG*IVFQVC
Trigger: ACACACCTGGAATACGATGCAGCCCACCATTAACTC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACGCCACCTCAAGCACATaGAAGAAAGTTCTGCCATCA +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHATSST*KKVLPS
Trigger: TGATGGCAGAACTTTCTTGCATGTGCTTGAGGTGGC...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCATTCATCTGGGTACTaGCAGTTGTCCGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHHSSGY*QLSGIK
Trigger: CTTTATCCCGGACAACTGCCAGTACCCAGATGAATG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp AATTACATAGGCCACCTCAAGCACATGCAAGAAAGTTCTGCCATCATTAAAATTCCACTTTATCTGACATaGGTCTTACTTGCCGACGAA +
Preference number: 4 (lower is better)
Translates to: NYIGHLKHMQESSAIIKIPLYLT*VLLADE
Trigger: TTCGTCGGCAAGTAAGACCCATGTCAGATAAAGTGG...AATTTTAATGATGGCAGAACTTTCTTGCATGTGCTTGAGGTGGCCTATGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CCA 90 bp TCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTTGTATGTTCTCTTTCAACATATaGAATAAGAGCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SSEEEIISRIHTEHSFCMFSFNI*NKSWFW
Trigger: CCAAAACCAGCTCTTATTCCATATGTTGAAAGAGAA...CATACAAAAGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGTTCAAAATTGTGGGTaGGACTCACAGTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHVQNCG*DSQSQE
Trigger: CTCTTGGGACTGTGAGTCCCACCCACAATTTTGAAC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATTTTCTTGTAAAGCATaGCCTAGTAAAGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKFSCKA*PSKASS
Trigger: GCTAGATGCTTTACTAGGCCATGCTTTACAAGAAAA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551264.5
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCATAAAGTCTCTGTCTaGAGGGCTGACACATGCTAT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCHKVSV*RADTCY
Trigger: ATAGCATGTGTCAGCCCTTCAGACAGAGACTTTATG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCCATCTGAAGTCGTGTaGTTTCACTACGAAGTGCAT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSPSEVV*FHYEVH
Trigger: ATGCACTTCGTAGTGAAATCACACGACTTCAGATGG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTCCATGAGCTCCATCTaGAGTCGTGTGATTTCACTA +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCSMSSI*SRVISL
Trigger: TAGTGAAATCACACGACTTCAGATGGAGCTCATGGA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAGAACATGGTTGGCCTaGTCACTAACAAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSRTWLA*SLTSCV
Trigger: TACACAGCTTGTTAGTGATCAGGCCAACCATGTTCT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATAGAACATGGTTGGCCTaGTCACTAACAAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHRTWLA*SLTSCV
Trigger: TACACAGCTTGTTAGTGATCAGGCCAACCATGTTCT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTAGAACATGGTTGGCCTaGTCACTAACAAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCRTWLA*SLTSCV
Trigger: TACACAGCTTGTTAGTGATCAGGCCAACCATGTTCT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATGGTCTCTTTCAAGCTaGGTATCCCGAATTTTATGT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKWSLSS*VSRILC
Trigger: ACATAAAATTCGGGATACTCAGCTTGAAAGAGACCA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCCTCTCCATTCTCCTTaGCTATCTTCTCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHPLHSP*LSSPFF
Trigger: AAAGAAGGGAGAAGATAGTCAAGGAGAATGGAGAGG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCCTCTCCATTCTCCTTaGCTATCTTCTCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSPLHSP*LSSPFF
Trigger: AAAGAAGGGAGAAGATAGTCAAGGAGAATGGAGAGG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGATATTAGCAGTCAGTaGCTCCATCTCTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNDISSQ*LHLFID
Trigger: ATCAATGAAGAGATGGAGTCACTGACTGCTAATATC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATGCATTATGTTGGCCTaGCAATCAGAAATACTGTCA +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKCIMLA*QSEILS
Trigger: TGACAGTATTTCTGATTGTCAGGCCAACATAATGCA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTGCATTATGTTGGCCTaGCAATCAGAAATACTGTCA +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNCIMLA*QSEILS
Trigger: TGACAGTATTTCTGATTGTCAGGCCAACATAATGCA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCTTATCCTGCTGAACTaGTGTGTTTCCCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCLILLN*CVSLRN
Trigger: GTTTCTCAGGGAAACACATCAGTTCAGCAGGATAAG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCTTATCCTGCTGAACTaGTGTGTTTCCCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHLILLN*CVSLRN
Trigger: GTTTCTCAGGGAAACACATCAGTTCAGCAGGATAAG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTCGAATGCACTTTGCTaGATCTCTGATATCCCACAC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSSNALC*ISDIPH
Trigger: GTGTGGGATATCAGAGATTCAGCAAAGTGCATTCGA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTCGAATGCACTTTGCTaGATCTCTGATATCCCACAC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHSNALC*ISDIPH
Trigger: GTGTGGGATATCAGAGATTCAGCAAAGTGCATTCGA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGGGTTTAGGGCAATTTaGTTGATCTGGTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCGFRAI*LIWFSP
Trigger: TGGAGAGAACCAGATCAATCAAATTGCCCTAAACCC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGGGTTTAGGGCAATTTaGTTGATCTGGTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSGFRAI*LIWFSP
Trigger: TGGAGAGAACCAGATCAATCAAATTGCCCTAAACCC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGGGTTTAGGGCAATTTaGTTGATCTGGTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHGFRAI*LIWFSP
Trigger: TGGAGAGAACCAGATCAATCAAATTGCCCTAAACCC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATAACTTTCCTGTAGACTaGAACCTTTTAAGATCCCAC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNNFPVD*NLLRSH
Trigger: GTGGGATCTTAAAAGGTTTCAGTCTACAGGAAAGTT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTGTCCACTGGAAATCTaGTCCACAGTAAGGCACATA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHCPLEI*STVRHI
Trigger: TATGTGCCTTACTGTGGATCAGATTTCCAGTGGACA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTGTCCACTGGAAATCTaGTCCACAGTAAGGCACATA +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCCPLEI*STVRHI
Trigger: TATGTGCCTTACTGTGGATCAGATTTCCAGTGGACA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAATAGGTTATCCCCTTaGATGGTTAGTGCTTCTATG +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKNRLSP*MVSASM
Trigger: CATAGAAGCACTAACCATTCAAGGGGATAACCTATT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATAATAGGTTATCCCCTTaGATGGTTAGTGCTTCTATG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNNRLSP*MVSASM
Trigger: CATAGAAGCACTAACCATTCAAGGGGATAACCTATT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTTGATAGGACTATCATaGCCCTTCATCTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSLIGLS*PFISPT
Trigger: AGTGGGAGAGATGAAGGGTCATGATAGTCCTATCAA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTTGATAGGACTATCATaGCCCTTCATCTCTCCCACT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCLIGLS*PFISPT
Trigger: AGTGGGAGAGATGAAGGGTCATGATAGTCCTATCAA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGAATCCACTACAGACTaGTATAAATACCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNESTTD*YKYLTS
Trigger: GCTTGTCAGGTATTTATATCAGTCTGTAGTGGATTC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGATTTCACTACGAAGTaGATTGATTTGCTGACTAGC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNDFTTK*IDLLTS
Trigger: GCTAGTCAGCAAATCAATGCACTTCGTAGTGAAATC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGATTTCACTACGAAGTaGATTGATTTGCTGACTAGC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKDFTTK*IDLLTS
Trigger: GCTAGTCAGCAAATCAATGCACTTCGTAGTGAAATC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGCATCAACCGTCTCTTaGATGGCTTTAATTCTTACA +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNASTVS*MALILT
Trigger: TGTAAGAATTAAAGCCATGCAAGAGACGGTTGATGC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGCATCAACCGTCTCTTaGATGGCTTTAATTCTTACA +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKASTVS*MALILT
Trigger: TGTAAGAATTAAAGCCATGCAAGAGACGGTTGATGC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCTCATTTCCTTCACCTaGTCTGGCAAGAACATGGTT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHLISFT*SGKNMV
Trigger: AACCATGTTCTTGCCAGAGCAGGTGAAGGAAATGAG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGAAATATGGCGCTCTTaGTGTGGCTCTTGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCEIWRS*CGSCQV
Trigger: AACTTGACAAGAGCCACAGCAAGAGCGCCATATTTC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATGCTTTTTCAGAGTCTaGAGTCTTTTCTGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKCFFRV*SLFWLF
Trigger: AAACAGCCAGAAAAGACTGCAGACTCTGAAAAAGCA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTGCTTTTTCAGAGTCTaGAGTCTTTTCTGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNCFFRV*SLFWLF
Trigger: AAACAGCCAGAAAAGACTGCAGACTCTGAAAAAGCA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATATGTTCTTTTTGAGCTaGTTGAAGTCTCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNMFFLS*LKSLQF
Trigger: GAACTGCAGAGACTTCAAGCAGCTCAAAAAGAACAT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGGAATTCTCATTTTCTaGTGGGCTCCTGTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCGILIF*WAPVLD
Trigger: ATCAAGGACAGGAGCCCAGCAGAAAATGAGAATTCC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACGGAATTCTCATTTTCTaGTGGGCTCCTGTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHGILIF*WAPVLD
Trigger: ATCAAGGACAGGAGCCCAGCAGAAAATGAGAATTCC...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGAGTCTATTCATATCTaGCTCCATGTTGGAAATGGT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKESIHI*LHVGNG
Trigger: ACCATTTCCAACATGGAGGCAGATATGAATAGACTC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCTCACCTTCTTCCTTTaGTTCTTCCATCTGCATTAT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNLTFFL*FFHLHY
Trigger: ATAATGCAGATGGAAGAAGCAAAGGAAGAAGGTGAG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTCTGATAGAGATGACTaGCTGGAAATGCTGCCTATC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSSDRDD*LEMLPI
Trigger: GATAGGCAGCATTTCCAGGCAGTCATCTCTATCAGA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTCTGATAGAGATGACTaGCTGGAAATGCTGCCTATC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHSDRDD*LEMLPI
Trigger: GATAGGCAGCATTTCCAGGCAGTCATCTCTATCAGA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATTCTGCTTTCTCATATaGCTTTCTCCTTGTTACAGG +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKFCFLI*LSPCYR
Trigger: CCTGTAACAAGGAGAAAGGCATATGAGAAAGCAGAA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTCTGCTTTCTCATATaGCTTTCTCCTTGTTACAGG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNFCFLI*LSPCYR
Trigger: CCTGTAACAAGGAGAAAGGCATATGAGAAAGCAGAA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTGTTCGACTGGTACTTaGAGAACAAGCATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHCSTGT*RTSISK
Trigger: CTTGGAGATGCTTGTTCTGCAAGTACCAGTCGAACA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AAATTAATTCTGGAACAAAAGGTAGCAGATGGGATACTGAATGGAAAACAATGGGGGTTGATTATGCCCTaGTTTTGTTCCTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: KLILEQKVADGILNGKQWGLIMP*FCSLAF
Trigger: AAAGGCCAAGGAACAAAAGCAGGGCATAATCAACCC...CCATTGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGTTCCAGAATTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGGGTTGATTATGCCCTaGTTTTGTTCCTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCGLIMP*FCSLAF
Trigger: AAAGGCCAAGGAACAAAAGCAGGGCATAATCAACCC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551264.5
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCTTCAATCTTCTCTTTaGCAAGCTGTGGTCTTATTC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNLQSSL*QAVVLF
Trigger: GAATAAGACCACAGCTTGCCAAAGAGAAGATTGAAG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACATCAATATCACGAGTaGTATCAAATAAGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: LFPPQMIIALIIATKVRKHQYHE*YQISQG
Trigger: TCCTTGACTTATTTGATACCACTCGTGATATTGATG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTTTGGGGACACACTCTaGTTTGACACACATGAATGG +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSFGDTL*FDTHEW
Trigger: CCATTCATGTGTGTCAAACCAGAGTGTGTCCCCAAA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGTAGTCTTGTTAGCTTaGAATCTCTATAGGGGACAT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKVVLLA*NLYRGH
Trigger: ATGTCCCCTATAGAGATTCCAAGCTAACAAGACTAC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGTAGTCTTGTTAGCTTaGAATCTCTATAGGGGACAT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNVVLLA*NLYRGH
Trigger: ATGTCCCCTATAGAGATTCCAAGCTAACAAGACTAC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGTCTGCAGTCTTTTCTaGCTGTTTTCTAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNVCSLF*LFSSSS
Trigger: TGATGAACTAGAAAACAGCCAGAAAAGACTGCAGAC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCCACTTTATCTGACATaGGTCTTACTTGCCGACGAA +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCPLYLT*VLLADE
Trigger: TTCGTCGGCAAGTAAGACCCATGTCAGATAAAGTGG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCCACTTTATCTGACATaGGTCTTACTTGCCGACGAA +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSPLYLT*VLLADE
Trigger: TTCGTCGGCAAGTAAGACCCATGTCAGATAAAGTGG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATATTCTCATTTTCTGCTaGGCTCCTGTCCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHILIFC*APVLDA
Trigger: TGCATCAAGGACAGGAGCCCAGCAGAAAATGAGAAT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACATTCTCATTTTCTGCTaGGCTCCTGTCCTTGATGCA +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHILIFC*APVLDA
Trigger: TGCATCAAGGACAGGAGCCCAGCAGAAAATGAGAAT...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACCATCTGCATTATGTTaGCCTGACAATCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKPSALC*PDNQKY
Trigger: GTATTTCTGATTGTCAGGCCAACATAATGCAGATGG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCCATCTGCATTATGTTaGCCTGACAATCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNPSALC*PDNQKY
Trigger: GTATTTCTGATTGTCAGGCCAACATAATGCAGATGG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAATATGGAATAAGAGCTaGTTTTGGGTAGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKIWNKS*FWVALV
Trigger: AACCAGTGCTACCCAAAACCAGCTCTTATTCCATAT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATATATGGAATAAGAGCTaGTTTTGGGTAGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNIWNKS*FWVALV
Trigger: AACCAGTGCTACCCAAAACCAGCTCTTATTCCATAT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAGATCTTGTAAAGCATaGCCTAGTAAAGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKRSCKA*PSKASS
Trigger: GCTAGATGCTTTACTAGGCCATGCTTTACAAGATCT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATAGATCTTGTAAAGCATaGCCTAGTAAAGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNRSCKA*PSKASS
Trigger: GCTAGATGCTTTACTAGGCCATGCTTTACAAGATCT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCTTCATCTCTCCCACTaGCATAAAAGTATCCATGTT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNLHLSH*HKSIHV
Trigger: AACATGGATACTTTTATGCCAGTGGGAGAGATGAAG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACTTCATCTCTCCCACTaGCATAAAAGTATCCATGTT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKLHLSH*HKSIHV
Trigger: AACATGGATACTTTTATGCCAGTGGGAGAGATGAAG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTACACTGCATCATCTCTaGTTCTGTATTCACAGTACG +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSTLHHL*FCIHST
Trigger: CGTACTGTGAATACAGAATCAGAGATGATGCAGTGT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGGTAAAAATGGCATGTaGACGAGAGCTCTGAACATT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSGKNGM*TRALNI
Trigger: AATGTTCAGAGCTCTCGTTCACATGCCATTTTTACC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATAGCATAGCATTCTCATaGAACATGTCATTGATGCTT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNSIAFS*NMSLML
Trigger: AAGCATCAATGACATGTTTCATGAGAATGCTATGCT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCTTCTCCCTTCTTTTTaGAAGTTTCTCTCGTCTTTT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNLLPSF*KFLSSF
Trigger: AAAAGACGAGAGAAACTTTCAAAAAGAAGGGAGAAG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATTATTTCTGTTTGTTTaGGTCGACCTTCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKLFLFV*VDLPVL
Trigger: AAGTACTGGAAGGTCGACTCAAACAAACAGAAATAA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATACAAGTACGATCTTTTaGTCCAGTGAAGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHTSTIF*SSEEEI
Trigger: GATCTCCTCTTCACTGGATCAAAAGATCGTACTTGT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTCTCCAAGAGTAACTTaGCCTGAAGACGTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHSPRVT*PEDVSV
Trigger: AACACTAACGTCTTCAGGTCAAGTTACTCTTGGAGA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTTAGGGCAATTTGATTaGTCTGGTTCTCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCLGQFD*SGSLQK
Trigger: CTTCTGGAGAGAACCAGATCAATCAAATTGCCCTAA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTTAGGGCAATTTGATTaGTCTGGTTCTCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSLGQFD*SGSLQK
Trigger: CTTCTGGAGAGAACCAGATCAATCAAATTGCCCTAA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAATAAACTACATGAATaGGTTAATGGTGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKNKLHE*VNGGLH
Trigger: ATGCAGCCCACCATTAACTCATTCATGTAGTTTATT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AAATTAATTCTGGAACAAAAGGTAGCAGATGGGATACTGAATGGAAAACAATGGAAGCAGGAAATGGGTTaGTTATGCCCTGCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: KLILEQKVADGILNGKQWKQEMG*LCPAFV
Trigger: AACAAAAGCAGGGCATAATCAACCCATTTCCTGCTT...CCATTGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGTTCCAGAATTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACAAGTACGATACCTTTTaGTCCAGTGAAGAGGAGATC +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHKYDTF*SSEEEI
Trigger: GATCTCCTCTTCACTGGATCAAAAGGTATCGTACTT...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR GCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATATTACATTGCCAAGTaGCAAAAGTCCACAGTTGAT +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKYYIAK*QKSTVD
Trigger: ATCAACTGTGGACTTTTGGCACTTGGCAATGTAATA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTATTACATTGCCAAGTaGCAAAAGTCCACAGTTGAT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNYYIAK*QKSTVD
Trigger: ATCAACTGTGGACTTTTGGCACTTGGCAATGTAATA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAGGCACTTATTACATTaGCAAGTGCCAAAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSRHLLH*QVPKVH
Trigger: GTGGACTTTTGGCACTTGGCAATGTAATAAGTGCCT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTAATTCTGGACCTCAATaGATCAACCGTCTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCNSGPQ*INRLLH
Trigger: ATGCAAGAGACGGTTGATGCATTGAGGTCCAGAATT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACGAAATGGTCATCTTCTaGATGATGATGTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHEMVIF*MMMSVT
Trigger: GGTCACAGACATCATCATGCAGAAGATGACCATTTC...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGTTCCAGAATCTGAGTaGTTTTGTTCCTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHVPESE*FCSLAF
Trigger: AAAGGCCAAGGAACAAAAGCACTCAGATTCTGGAAC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGTTCCAGAATCTGAGTaGTTTTGTTCCTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSVPESE*FCSLAF
Trigger: AAAGGCCAAGGAACAAAAGCACTCAGATTCTGGAAC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATAGTGACATTATTTCCTaGCCAGTCACCAGATTCCAT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHSDIIS*PVTRFH
Trigger: ATGGAATCTGGTGACTGGGCAGGAAATAATGTCACT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAGTGACATTATTTCCTaGCCAGTCACCAGATTCCAT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSSDIIS*PVTRFH
Trigger: ATGGAATCTGGTGACTGGGCAGGAAATAATGTCACT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTGGTTAGTGCTTCTATaGCATCATAATGAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSWLVLL*HHNEGV
Trigger: AACCCCCTCATTATGATGGCATAGAAGCACTAACCA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTGGTTAGTGCTTCTATaGCATCATAATGAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCWLVLL*HHNEGV
Trigger: AACCCCCTCATTATGATGGCATAGAAGCACTAACCA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGACCCAATCCTTATGTaGATTTGGAACTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCDPILM*IWNLLK
Trigger: CTTCAGCAAGTTCCAAATGCACATAAGGATTGGGTC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGACCCAATCCTTATGTaGATTTGGAACTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHDPILM*IWNLLK
Trigger: CTTCAGCAAGTTCCAAATGCACATAAGGATTGGGTC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTAGTTCGATCATCAGCTaGAGTAAAAATGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCSSIIS*SKNVGG
Trigger: TCCACCCACATTTTTACTGCAGCTGATGATCGAACT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAGTTCGATCATCAGCTaGAGTAAAAATGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSSSIIS*SKNVGG
Trigger: TCCACCCACATTTTTACTGCAGCTGATGATCGAACT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGACCATCTTGCAAATTaGGAGCCTTCCAAATTCTCA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHDHLAN*EPSKFS
Trigger: TGAGAATTTGGAAGGCTCGCAATTTGCAAGATGGTC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGACCATCTTGCAAATTaGGAGCCTTCCAAATTCTCA +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCDHLAN*EPSKFS
Trigger: TGAGAATTTGGAAGGCTCGCAATTTGCAAGATGGTC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGACCATCTTGCAAATTaGGAGCCTTCCAAATTCTCA +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSDHLAN*EPSKFS
Trigger: TGAGAATTTGGAAGGCTCGCAATTTGCAAGATGGTC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGCGAGATCAACAAAATaGAACTTTGCAGTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHARSTK*NFAVRV
Trigger: AACCCTGACTGCAAAGTTCCATTTTGTTGATCTCGC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGCGAGATCAACAAAATaGAACTTTGCAGTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSARSTK*NFAVRV
Trigger: AACCCTGACTGCAAAGTTCCATTTTGTTGATCTCGC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGCTGCAGTAAAAATGTaGGTGGAATTAACACATATG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNAAVKM*VELTHM
Trigger: CATATGTGTTAATTCCACCCACATTTTTACTGCAGC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTGGTCTCTTTCAAGCTaGGTATCCCGAATTTTATGT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSWSLSS*VSRILC
Trigger: ACATAAAATTCGGGATACTCAGCTTGAAAGAGACCA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGATATTAGCAGTCAGTaGCTCCATCTCTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSDISSQ*LHLFID
Trigger: ATCAATGAAGAGATGGAGTCACTGACTGCTAATATC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGATATTAGCAGTCAGTaGCTCCATCTCTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCDISSQ*LHLFID
Trigger: ATCAATGAAGAGATGGAGTCACTGACTGCTAATATC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGATATTAGCAGTCAGTaGCTCCATCTCTTCATTGAT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHDISSQ*LHLFID
Trigger: ATCAATGAAGAGATGGAGTCACTGACTGCTAATATC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTGCATTATGTTGGCCTaGCAATCAGAAATACTGTCA +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSCIMLA*QSEILS
Trigger: TGACAGTATTTCTGATTGTCAGGCCAACATAATGCA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTGCATTATGTTGGCCTaGCAATCAGAAATACTGTCA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHCIMLA*QSEILS
Trigger: TGACAGTATTTCTGATTGTCAGGCCAACATAATGCA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAACTTTCCTGTAGACTaGAACCTTTTAAGATCCCAC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSNFPVD*NLLRSH
Trigger: GTGGGATCTTAAAAGGTTTCAGTCTACAGGAAAGTT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATAATAGGTTATCCCCTTaGATGGTTAGTGCTTCTATG +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHNRLSP*MVSASM
Trigger: CATAGAAGCACTAACCATTCAAGGGGATAACCTATT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAATAGGTTATCCCCTTaGATGGTTAGTGCTTCTATG +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSNRLSP*MVSASM
Trigger: CATAGAAGCACTAACCATTCAAGGGGATAACCTATT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGAATCCACTACAGACTaGTATAAATACCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSESTTD*YKYLTS
Trigger: GCTTGTCAGGTATTTATATCAGTCTGTAGTGGATTC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGAATCCACTACAGACTaGTATAAATACCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCESTTD*YKYLTS
Trigger: GCTTGTCAGGTATTTATATCAGTCTGTAGTGGATTC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCAGTCTTTCAGATCCTaGGAGATCAACAAAATGGAA +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSQSFRS*EINKME
Trigger: TTCCATTTTGTTGATCTCGCAGGATCTGAAAGACTG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCAGTCTTTCAGATCCTaGGAGATCAACAAAATGGAA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHQSFRS*EINKME
Trigger: TTCCATTTTGTTGATCTCGCAGGATCTGAAAGACTG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATAATGTTTGCCAAGTCTaGTTGATAATTGGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNNVCQV*LIIGFF
Trigger: GAAAAAGCCAATTATCAAGCAGACTTGGCAAACATT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTGCTTTTTCAGAGTCTaGAGTCTTTTCTGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCCFFRV*SLFWLF
Trigger: AAACAGCCAGAAAAGACTGCAGACTCTGAAAAAGCA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTGCTTTTTCAGAGTCTaGAGTCTTTTCTGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSCFFRV*SLFWLF
Trigger: AAACAGCCAGAAAAGACTGCAGACTCTGAAAAAGCA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTATGTTCTTTTTGAGCTaGTTGAAGTCTCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCMFFLS*LKSLQF
Trigger: GAACTGCAGAGACTTCAAGCAGCTCAAAAAGAACAT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTATGTTCTTTTTGAGCTaGTTGAAGTCTCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSMFFLS*LKSLQF
Trigger: GAACTGCAGAGACTTCAAGCAGCTCAAAAAGAACAT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATATTTTTAAGCAACCTTaGATGTTCTTTTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNIFKQP*MFFLSC
Trigger: GCAGCTCAAAAAGAACATGCAAGGTTGCTTAAAAAT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGAGTCTATTCATATCTaGCTCCATGTTGGAAATGGT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSESIHI*LHVGNG
Trigger: ACCATTTCCAACATGGAGGCAGATATGAATAGACTC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGAGTCTATTCATATCTaGCTCCATGTTGGAAATGGT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHESIHI*LHVGNG
Trigger: ACCATTTCCAACATGGAGGCAGATATGAATAGACTC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCTCACCTTCTTCCTTTaGTTCTTCCATCTGCATTAT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCLTFFL*FFHLHY
Trigger: ATAATGCAGATGGAAGAAGCAAAGGAAGAAGGTGAG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AAATTAATTCTGGAACAAAAGGTAGCAGATGGGATACTGAATGGAAAACAATGGCTCACCTTCTTCCTTTaGTTCTTCCATCTGCATTAT +
Preference number: 4 (lower is better)
Translates to: KLILEQKVADGILNGKQWLTFFL*FFHLHY
Trigger: ATAATGCAGATGGAAGAAGCAAAGGAAGAAGGTGAG...CCATTGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGTTCCAGAATTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCTCACCTTCTTCCTTTaGTTCTTCCATCTGCATTAT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHLTFFL*FFHLHY
Trigger: ATAATGCAGATGGAAGAAGCAAAGGAAGAAGGTGAG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCTGAAGCTAGTTCACTaGTATCTGCATACAGCAATT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCLKLVH*YLHTAI
Trigger: AATTGCTGTATGCAGATAGCAGTGAACTAGCTTCAG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AAATTAATTCTGGAACAAAAGGTAGCAGATGGGATACTGAATGGAAAACAATGGCTGAAGCTAGTTCACTaGTATCTGCATACAGCAATT +
Preference number: 4 (lower is better)
Translates to: KLILEQKVADGILNGKQWLKLVH*YLHTAI
Trigger: AATTGCTGTATGCAGATAGCAGTGAACTAGCTTCAG...CCATTGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGTTCCAGAATTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCTGAAGCTAGTTCACTaGTATCTGCATACAGCAATT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHLKLVH*YLHTAI
Trigger: AATTGCTGTATGCAGATAGCAGTGAACTAGCTTCAG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCTGAAGCTAGTTCACTaGTATCTGCATACAGCAATT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSLKLVH*YLHTAI
Trigger: AATTGCTGTATGCAGATAGCAGTGAACTAGCTTCAG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCCGATTCATACGTTTTaGCTAGTAAGTACAGGACAA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHPIHTF*LVSTGQ
Trigger: TTGTCCTGTACTTACTAGGCAAAACGTATGAATCGG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCCGATTCATACGTTTTaGCTAGTAAGTACAGGACAA +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSPIHTF*LVSTGQ
Trigger: TTGTCCTGTACTTACTAGGCAAAACGTATGAATCGG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTCACTTTCATCAGACTaGTTTTGTTCCTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCSLSSD*FCSLAF
Trigger: AAAGGCCAAGGAACAAAAGCAGTCTGATGAAAGTGA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552961.5
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCTTCAATCTTCTCTTTaGCAAGCTGTGGTCTTATTC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHLQSSL*QAVVLF
Trigger: GAATAAGACCACAGCTTGCCAAAGAGAAGATTGAAG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATATTCACTTTAAAATCTaGAGCAGGAAGCCCATTTTT +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNIHFKI*SRKPIF
Trigger: AAAAATGGGCTTCCTGCTCCAGATTTTAAAGTGAAT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAGTCTGCTTGATAATTaGCTTTTTCATCTGATTCAG +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKSLLDN*LFHLIQ
Trigger: CTGAATCAGATGAAAAAGCCAATTATCAAGCAGACT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGTCTGCAGTCTTTTCTaGCTGTTTTCTAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSVCSLF*LFSSSS
Trigger: TGATGAACTAGAAAACAGCCAGAAAAGACTGCAGAC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGTCTGCAGTCTTTTCTaGCTGTTTTCTAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCVCSLF*LFSSSS
Trigger: TGATGAACTAGAAAACAGCCAGAAAAGACTGCAGAC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCCATCTGCATTATGTTaGCCTGACAATCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCPSALC*PDNQKY
Trigger: GTATTTCTGATTGTCAGGCCAACATAATGCAGATGG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTATATGGAATAAGAGCTaGTTTTGGGTAGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCIWNKS*FWVALV
Trigger: AACCAGTGCTACCCAAAACCAGCTCTTATTCCATAT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACATATGGAATAAGAGCTaGTTTTGGGTAGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHIWNKS*FWVALV
Trigger: AACCAGTGCTACCCAAAACCAGCTCTTATTCCATAT...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATATATGGAATAAGAGCTaGTTTTGGGTAGCACTGGTT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHIWNKS*FWVALV
Trigger: AACCAGTGCTACCCAAAACCAGCTCTTATTCCATAT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATTCTCTTTCAACATATaGAATAAGAGCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKFSFNI*NKSWFW
Trigger: CCAAAACCAGCTCTTATTCCATATGTTGAAAGAGAA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTCTCTTTCAACATATaGAATAAGAGCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNFSFNI*NKSWFW
Trigger: CCAAAACCAGCTCTTATTCCATATGTTGAAAGAGAA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATAGATCTTGTAAAGCATaGCCTAGTAAAGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHRSCKA*PSKASS
Trigger: GCTAGATGCTTTACTAGGCCATGCTTTACAAGATCT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCTTCATCTCTCCCACTaGCATAAAAGTATCCATGTT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSLHLSH*HKSIHV
Trigger: AACATGGATACTTTTATGCCAGTGGGAGAGATGAAG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp AATTACATAGGCCACCTCAAGCACATGCAAGAAAGTTCTGCCATCATTAAAATTTTTTCTTGTAAAGCATaGCCTAGTAAAGCATCTAGC +
Preference number: 4 (lower is better)
Translates to: NYIGHLKHMQESSAIIKIFSCKA*PSKASS
Trigger: GCTAGATGCTTTACTAGGCCATGCTTTACAAGAAAA...AATTTTAATGATGGCAGAACTTTCTTGCATGTGCTTGAGGTGGCCTATGTAATT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTAGCATAGCATTCTCATaGAACATGTCATTGATGCTT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCSIAFS*NMSLML
Trigger: AAGCATCAATGACATGTTTCATGAGAATGCTATGCT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCTTCTCCCTTCTTTTTaGAAGTTTCTCTCGTCTTTT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHLLPSF*KFLSSF
Trigger: AAAAGACGAGAGAAACTTTCAAAAAGAAGGGAGAAG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTTATTTCTGTTTGTTTaGGTCGACCTTCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCLFLFV*VDLPVL
Trigger: AAGTACTGGAAGGTCGACTCAAACAAACAGAAATAA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CATACACACACAGGACTATGTGGGAAAATCTTTCTTTGTCCTCAAGATAATAATTTATTTCTGTTTGTTTaGGTCGACCTTCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: HTHTGLCGKIFLCPQDNNLFLFV*VDLPVL
Trigger: AAGTACTGGAAGGTCGACTCAAACAAACAGAAATAA...ATTATTATCTTGAGGACAAAGAAAGATTTTCCCACATAGTCCTGTGTGTGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR TCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTTATTTCTGTTTGTTTaGGTCGACCTTCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSLFLFV*VDLPVL
Trigger: AAGTACTGGAAGGTCGACTCAAACAAACAGAAATAA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTTATTTCTGTTTGTTTaGGTCGACCTTCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHLFLFV*VDLPVL
Trigger: AAGTACTGGAAGGTCGACTCAAACAAACAGAAATAA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTAATAAACTACATGAATaGGTTAATGGTGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCNKLHE*VNGGLH
Trigger: ATGCAGCCCACCATTAACTCATTCATGTAGTTTATT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR TCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACAAAGTCTCACTCATCTaGCAGACTAAATACCTAACA +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHKVSLI*QTKYLT
Trigger: TGTTAGGTATTTAGTCTGTCAGATGAGTGAGACTTT...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTCCCGAATTTTATGTTaGAGCATCATTAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCSRILC*SIISFS
Trigger: AGAGAAGCTAATGATGCTGCAACATAAAATTCGGGA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTCCCGAATTTTATGTTaGAGCATCATTAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSSRILC*SIISFS
Trigger: AGAGAAGCTAATGATGCTGCAACATAAAATTCGGGA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTCCCGAATTTTATGTTaGAGCATCATTAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHSRILC*SIISFS
Trigger: AGAGAAGCTAATGATGCTGCAACATAAAATTCGGGA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAATAAGAGCTGGTTTTaGGTAGCACTGGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSNKSWF*VALVIS
Trigger: AGAAATAACCAGTGCTACCCAAAACCAGCTCTTATT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACAATAAGAGCTGGTTTTaGGTAGCACTGGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHNKSWF*VALVIS
Trigger: AGAAATAACCAGTGCTACCCAAAACCAGCTCTTATT...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTAATAAGAGCTGGTTTTaGGTAGCACTGGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCNKSWF*VALVIS
Trigger: AGAAATAACCAGTGCTACCCAAAACCAGCTCTTATT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATAATAAGAGCTGGTTTTaGGTAGCACTGGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHNKSWF*VALVIS
Trigger: AGAAATAACCAGTGCTACCCAAAACCAGCTCTTATT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGCTGCAGTAAAAATGTaGGTGGAATTAACACATATG +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCAAVKM*VELTHM
Trigger: CATATGTGTTAATTCCACCCACATTTTTACTGCAGC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATAATGTTTGCCAAGTCTaGTTGATAATTGGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHNVCQV*LIIGFF
Trigger: GAAAAAGCCAATTATCAAGCAGACTTGGCAAACATT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAATGTTTGCCAAGTCTaGTTGATAATTGGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSNVCQV*LIIGFF
Trigger: GAAAAAGCCAATTATCAAGCAGACTTGGCAAACATT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR GCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATATTTTTAAGCAACCTTaGATGTTCTTTTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHIFKQP*MFFLSC
Trigger: GCAGCTCAAAAAGAACATGCAAGGTTGCTTAAAAAT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTATTTTTAAGCAACCTTaGATGTTCTTTTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCIFKQP*MFFLSC
Trigger: GCAGCTCAAAAAGAACATGCAAGGTTGCTTAAAAAT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR GCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTATTTTTAAGCAACCTTaGATGTTCTTTTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSIFKQP*MFFLSC
Trigger: GCAGCTCAAAAAGAACATGCAAGGTTGCTTAAAAAT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTATTCACTTTAAAATCTaGAGCAGGAAGCCCATTTTT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCIHFKI*SRKPIF
Trigger: AAAAATGGGCTTCCTGCTCCAGATTTTAAAGTGAAT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCATCAATATCACGAGTaGTATCAAATAAGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHHQYHE*YQISQG
Trigger: TCCTTGACTTATTTGATACCACTCGTGATATTGATG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTTCTCTTTCAACATATaGAATAAGAGCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHFSFNI*NKSWFW
Trigger: CCAAAACCAGCTCTTATTCCATATGTTGAAAGAGAA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTTCTCTTTCAACATATaGAATAAGAGCTGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCFSFNI*NKSWFW
Trigger: CCAAAACCAGCTCTTATTCCATATGTTGAAAGAGAA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTTCATGTTTAATTACTaGCAATATCTTCCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSFMFNY*QYLPPD
Trigger: ATCTGGGGGAAGATATTGCCAGTAATTAAACATGAA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTTCATGTTTAATTACTaGCAATATCTTCCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHFMFNY*QYLPPD
Trigger: ATCTGGGGGAAGATATTGCCAGTAATTAAACATGAA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CCA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTTCATGTTTAATTACTaGCAATATCTTCCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCFMFNY*QYLPPD
Trigger: ATCTGGGGGAAGATATTGCCAGTAATTAAACATGAA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS TCA 90 bp GGCGGCGGGCAGCGATCGAGCCGTTGGGCCTCGGCACCGCAGAGCTaGGGCGCCACTGGGGCCGCGGGACTCGGGCGCAGTAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GGGQRSSRWASAPQS*GATGAAGLGRSRLG
Trigger: CCCCAGCCTACTGCGCCCGAGTCCCGCGGCCCCAGTGGCGCCTCAGCTCTGCGGTGCCGAGGCCCAACGGCTCGATCGCTGCCCGCCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361418.10
ENST00000361961.7
CDS CCA 90 bp CTGCGGGCGGGCGGCCGGCTCACCTCCGCCGCGCTCCAGCCATGTTaGGCGACTGAATGGAAAGGTGGCGGCGGCGCTGAGGCAGCAAGA +
Preference number: 5 (lower is better)
Translates to: LRAGGRLTSAALQPC*ATEWKGGGGAEAAR
Trigger: TCTTGCTGCCTCAGCGCCGCCGCCACCTTTCCATTCAGTCGCCCAACATGGCTGGAGCGCGGCGGAGGTGAGCCGGCCGCCCGCCCGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361961.7
CDS GCA 90 bp GGCGTTGGTAAGGCCTGGACTCTCGCCACAGGAATTCTCATTTTCTaGTGGGCTCCTGTCCTTGATGCATCTGTTTCGACAGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GVGKAWTLATGILIF*WAPVLDASVSTAAA
Trigger: TGCAGCTGCTGTCGAAACAGATGCATCAAGGACAGGAGCCCAGCAGAAAATGAGAATTCCTGTGGCGAGAGTCCAGGCCTTACCAACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS TCA 90 bp GACTCTCGCCACAGGAATTCTCATTTTCTGCTGGGCTCCTGTCCTTaGTGCATCTGTTTCGACAGCAGCTGCACTGGAACCTGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: DSRHRNSHFLLGSCP*CICFDSSCTGTCVL
Trigger: CAGGACACAGGTTCCAGTGCAGCTGCTGTCGAAACAGATGCATCAAGGACAGGAGCCCAGCAGAAAATGAGAATTCCTGTGGCGAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS CCA 90 bp GTTGGTAAGGCCTGGACTCTCGCCACAGGAATTCTCATTTTCTGCTaGGCTCCTGTCCTTGATGCATCTGTTTCGACAGCAGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: VGKAWTLATGILIFC*APVLDASVSTAAAL
Trigger: CAGTGCAGCTGCTGTCGAAACAGATGCATCAAGGACAGGAGCCCAGCAGAAAATGAGAATTCCTGTGGCGAGAGTCCAGGCCTTACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS GCA 90 bp GTCATCTTCTGCATGATGATGTCTGTGACCCTGCGCTCAAGGAGCTaGCACTTCATGCGAGCTGTCTTGGAAATAAACACTCGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: VIFCMMMSVTLRSRS*HFMRAVLEINTRPV
Trigger: GACTGGCCGAGTGTTTATTTCCAAGACAGCTCGCATGAAGTGGCAGCTCCTTGAGCGCAGGGTCACAGACATCATCATGCAGAAGATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGCAGCGATCGAGCCGTaGGGCCTCGGCACCGCAGAG +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNAAIEP*GLGTAE
Trigger: CTCTGCGGTGCCGAGGCCCAACGGCTCGATCGCTGC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361418.10
ENST00000361961.7
CDS TCA 90 bp CTTGATGCATCTGTTTCGACAGCAGCTGCACTGGAACCTGTGTCCTaGGCAGGTGCATCAGATGAACTCAGCTTCCGAGTAACTTTCCCA +
Preference number: 5 (lower is better)
Translates to: LDASVSTAAALEPVS*AGASDELSFRVTFP
Trigger: TGGGAAAGTTACTCGGAAGCTGAGTTCATCTGATGCACCTGCTCAGGACACAGGTTCCAGTGCAGCTGCTGTCGAAACAGATGCATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGCAGCGATCGAGCCGTaGGGCCTCGGCACCGCAGAG +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSAAIEP*GLGTAE
Trigger: CTCTGCGGTGCCGAGGCCCAACGGCTCGATCGCTGC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361418.10
ENST00000361961.7
CDS CCA 90 bp TTTGGCTATTACCCCCGAGGGAATCCTGTAGTAGTCTTGTTAGCTTaGAATCTCTATAGGGGACATGTGTGGCCCTCTTGCTCTTGTCTC +
Preference number: 5 (lower is better)
Translates to: FGYYPRGNPVVVLLA*NLYRGHVWPSCSCL
Trigger: GAGACAAGAGCAAGAGGGCCACACATGTCCCCTATAGAGATTCCAAGCTAACAAGACTACTACAGGATTCCCTCGGGGGTAATAGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGGGGACAAAGCGCGCTaGAACGGCGAGCGCGCCTGT +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSGDKAR*NGERAC
Trigger: ACAGGCGCGCTCGCCGTTCAAGCGCGCTTTGTCCCC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361961.7
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACATTTGTTGCCGGCGTaGGTAAGGCCTGGACTCTCG +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKHLLPA*VRPGLS
Trigger: CGAGAGTCCAGGCCTTACCAACGCCGGCAACAAATG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS GCA 90 bp TGCCCTCTCGCCTGTAGCTCCAGTACGCTTCAGTCTTTCAGATCCTaGGAGATCAACAAAATGGAACTTTGCAGTCAGGGTTTCAAATTC +
Preference number: 5 (lower is better)
Translates to: CPLACSSSTLQSFRS*EINKMELCSQGFKF
Trigger: GAATTTGAAACCCTGACTGCAAAGTTCCATTTTGTTGATCTCGCAGGATCTGAAAGACTGAAGCGTACTGGAGCTACAGGCGAGAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAACATGTGTGGCCCTCTaGCTCTTGTCTCCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKTCVAL*LLSPKA
Trigger: TGCCTTGGGAGACAAGAGCAAGAGGGCCACACATGT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGCTGGGCTCCTGTCCTaGATGCATCTGTTTCGACAG +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKAGLLS*MHLFRQ
Trigger: CTGTCGAAACAGATGCATCAAGGACAGGAGCCCAGC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS TCA 90 bp ATCTCCTCATTTCCTTCACCTGCTCTGGCAAGAACATGGTTGGCCTaGTCACTAACAAGCTGTGTAATTCTGGACCTCAATGCATCAACC +
Preference number: 5 (lower is better)
Translates to: ISSFPSPALARTWLA*SLTSCVILDLNAST
Trigger: GGTTGATGCATTGAGGTCCAGAATTACACAGCTTGTTAGTGATCAGGCCAACCATGTTCTTGCCAGAGCAGGTGAAGGAAATGAGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGTGGCCCTCTTGCTCTaGTCTCCCAAGGCACTTATT +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKVALLL*SPKALI
Trigger: AATAAGTGCCTTGGGAGACAAGAGCAAGAGGGCCAC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACATTTGTTGCCGGCGTaGGTAAGGCCTGGACTCTCG +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKHLLPA*VRPGLS
Trigger: CGAGAGTCCAGGCCTTACCAACGCCGGCAACAAATG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCATTACGGGGCCGGCTaGGTGGGGAAGAAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHHYGAG*VGKKEV
Trigger: CACCTCCTTCTTCCCCACCAAGCCGGCCCCGTAATG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCATTACGGGGCCGGCTaGGTGGGGAAGAAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSHYGAG*VGKKEV
Trigger: CACCTCCTTCTTCCCCACCAAGCCGGCCCCGTAATG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCATTACGGGGCCGGCTaGGTGGGGAAGAAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCHYGAG*VGKKEV
Trigger: CACCTCCTTCTTCCCCACCAAGCCGGCCCCGTAATG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTCTGGGTACTGGCAGTaGTCCGGGATAAAGCACCCA +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNSGYWQ*SGIKHP
Trigger: TGGGTGCTTTATCCCGGACAACTGCCAGTACCCAGA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATACATGTGTGGCCCTCTaGCTCTTGTCTCCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNTCVAL*LLSPKA
Trigger: TGCCTTGGGAGACAAGAGCAAGAGGGCCACACATGT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp AATTACATAGGCCACCTCAAGCACATGCAAGAAAGTTCTGCCATCATTAAAATTCATTTGTTGCCGGCGTaGGTAAGGCCTGGACTCTCG +
Preference number: 5 (lower is better)
Translates to: NYIGHLKHMQESSAIIKIHLLPA*VRPGLS
Trigger: CGAGAGTCCAGGCCTTACCAACGCCGGCAACAAATG...AATTTTAATGATGGCAGAACTTTCTTGCATGTGCTTGAGGTGGCCTATGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp CCTTTTGATCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTCCAGTACTTTAATTaGAGCCTCTTTCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PFDPVKRRSSVESTQSTAFQYFN*SLFLGS
Trigger: GCTGCCCAGAAAGAGGCTCAAATTAAAGTACTGGAA...AGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGATCAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS GCA 90 bp ATGGTTGGCCTGATCACTAACAAGCTGTGTAATTCTGGACCTCAATaGATCAACCGTCTCTTGCATGGCTTTAATTCTTACACGCAGGTT +
Preference number: 5 (lower is better)
Translates to: MVGLITNKLCNSGPQ*INRLLHGFNSYTQV
Trigger: AACCTGCGTGTAAGAATTAAAGCCATGCAAGAGACGGTTGATGCATTGAGGTCCAGAATTACACAGCTTGTTAGTGATCAGGCCAACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGTGGCCCTCTTGCTCTaGTCTCCCAAGGCACTTATT +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKVALLL*SPKALI
Trigger: AATAAGTGCCTTGGGAGACAAGAGCAAGAGGGCCAC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATGCTATCATGATTGTTaGGCTATTACCCCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKCYHDC*AITPEG
Trigger: TCCCTCGGGGGTAATAGCCAAACAATCATGATAGCA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAACGAAGTGCATTGATTaGCTGACTAGCTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKTKCID*LTSSVL
Trigger: CAGGACAGAGCTAGTCAGCAAATCAATGCACTTCGT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp AATTACATAGGCCACCTCAAGCACATGCAAGAAAGTTCTGCCATCATTAAAATTGCTGGGCTCCTGTCCTaGATGCATCTGTTTCGACAG +
Preference number: 5 (lower is better)
Translates to: NYIGHLKHMQESSAIIKIAGLLS*MHLFRQ
Trigger: CTGTCGAAACAGATGCATCAAGGACAGGAGCCCAGC...AATTTTAATGATGGCAGAACTTTCTTGCATGTGCTTGAGGTGGCCTATGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCATTTGTTGCCGGCGTaGGTAAGGCCTGGACTCTCG +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCHLLPA*VRPGLS
Trigger: CGAGAGTCCAGGCCTTACCAACGCCGGCAACAAATG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATTCATGCGAGCTGTCTaGGAAATAAACACTCGGCCA +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKFMRAV*EINTRP
Trigger: TGGCCGAGTGTTTATTTCCAAGACAGCTCGCATGAA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACCCTCTCCATTCTCCTaGACTATCTTCTCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKPSPFS*TIFSLL
Trigger: AAGAAGGGAGAAGATAGTCAAGGAGAATGGAGAGGG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGTTCTCCTTCGGGCCTaGTTCTTAGGTTTCACTTCA +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKVLLRA*FLGFTS
Trigger: TGAAGTGAAACCTAAGAACAAGGCCCGAAGGAGAAC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACACAGAGCACAGCTTTaGTATGCCCTTCAGCTATGT +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKHRAQL*YALQLC
Trigger: ACATAGCTGAAGGGCATACAAAAGCTGTGCTCTGTG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACTGTTCGACTGGTACTaGCAGAACAAGCATCTCCAA +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKLFDWY*QNKHLQ
Trigger: TTGGAGATGCTTGTTCTGCAAGTACCAGTCGAACAG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAAGAGGAAGGTGCCAGTaGGGTTTAGGGCAATTTGAT +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKRGRCQ*GLGQFD
Trigger: ATCAAATTGCCCTAAACCCAACTGGCACCTTCCTCT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS TCA 90 bp GCAGTTGTCCGGGATAAAGCACCCAACTTCAAACACTGCATCATCTaGAAAAGGGGAAGAAACAAGGACTCTGATTCTGTATTCACAGTA +
Preference number: 5 (lower is better)
Translates to: AVVRDKAPNFKHCII*KRGRNKDSDSVFTV
Trigger: TACTGTGAATACAGAATCAGAGTCCTTGTTTCTTCCCCTTTTTCAGATGATGCAGTGTTTGAAGTTGGGTGCTTTATCCCGGACAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552908.1
CDS CCA 90 bp GCTCCAGTACGCTTCAGTCTTTCAGATCCTGCGAGATCAACAAAATaGAACTTTGCAGTCAGGGTTTCAAATTCATTCATCTGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: APVRFSLSDPARSTK*NFAVRVSNSFICAD
Trigger: ATCAGCACAGATGAATGAATTTGAAACCCTGACTGCAAAGTTCCATTTTGTTGATCTCGCAGGATCTGAAAGACTGAAGCGTACTGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTCTGGGTACTGGCAGTaGTCCGGGATAAAGCACCCA +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSSGYWQ*SGIKHP
Trigger: TGGGTGCTTTATCCCGGACAACTGCCAGTACCCAGA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGGGACACACTCTGGTTaGACACACATGAATGGTAAA +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKGTHSG*THMNGK
Trigger: TTTACCATTCATGTGTGTCAAACCAGAGTGTGTCCC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATACATGTGTGGCCCTCTaGCTCTTGTCTCCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHTCVAL*LLSPKA
Trigger: TGCCTTGGGAGACAAGAGCAAGAGGGCCACACATGT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGCTGGGCTCCTGTCCTaGATGCATCTGTTTCGACAG +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCAGLLS*MHLFRQ
Trigger: CTGTCGAAACAGATGCATCAAGGACAGGAGCCCAGC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGCTGGGCTCCTGTCCTaGATGCATCTGTTTCGACAG +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSAGLLS*MHLFRQ
Trigger: CTGTCGAAACAGATGCATCAAGGACAGGAGCCCAGC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATTCCAGTACTTTAATTaGAGCCTCTTTCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKFQYFN*SLFLGS
Trigger: GCTGCCCAGAAAGAGGCTCAAATTAAAGTACTGGAA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTTGTATGACTGGTTATTTCTGTTaGTTTGAGTCGACCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SSEEEIISRIHTEHSFCMTGYFC*FESTFQ
Trigger: CTGGAAGGTCGACTCAAACAAACAGAAATAACCAGT...CATACAAAAGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAATTCATTCCAATCTCTaGCCCTTCTGCAACAGGTGT +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKIHSNL*PFCNRC
Trigger: ACACCTGTTGCAGAAGGGCAAGAGATTGGAATGAAT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGAAGCAGGAAATGGGTaGATTATGCCCCTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNEAGNG*IMPLLE
Trigger: CTCCAGAAGGGGCATAATCAACCCATTTCCTGCTTC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACAAATCCTGTTCCCATaGTGTATGTTTTACCAGCTC +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKQILFP*CMFYQL
Trigger: GAGCTGGTAAAACATACACAATGGGAACAGGATTTG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAAAGGCACTTATTACATaGCCAAGTGCCAAAAGTCCA +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKKALIT*PSAKSP
Trigger: TGGACTTTTGGCACTTGGCAATGTAATAAGTGCCTT...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGTGGCCCTCTTGCTCTaGTCTCCCAAGGCACTTATT +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCVALLL*SPKALI
Trigger: AATAAGTGCCTTGGGAGACAAGAGCAAGAGGGCCAC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATGCATCAACCGTCTCTaGCATGGCTTTAATTCTTAC +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKCINRL*HGFNSY
Trigger: GTAAGAATTAAAGCCATGCAAGAGACGGTTGATGCA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CCTTTTGATCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTCAGTCTGGCTTTCTCTaGTTCTTCTTTCATTTGTTT +
Preference number: 5 (lower is better)
Translates to: PFDPVKRRSSVESTQSTAQSGFL*FFFHLF
Trigger: AAACAAATGAAAGAAGAACAAGAGAAAGCCAGACTG...AGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGATCAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTCCTGTTTCCATTTGTaGCCGGCGTTGGTAAGGCCT +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSSCFHL*PALVRP
Trigger: AGGCCTTACCAACGCCGGCAACAAATGGAAACAGGA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CATACACACACAGGACTATGTGGGAAAATCTTTCTTTGTCCTCAAGATAATAATTCCTGTTTCCATTTGTaGCCGGCGTTGGTAAGGCCT +
Preference number: 5 (lower is better)
Translates to: HTHTGLCGKIFLCPQDNNSCFHL*PALVRP
Trigger: AGGCCTTACCAACGCCGGCAACAAATGGAAACAGGA...ATTATTATCTTGAGGACAAAGAAAGATTTTCCCACATAGTCCTGTGTGTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTCCTGTTTCCATTTGTaGCCGGCGTTGGTAAGGCCT +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHSCFHL*PALVRP
Trigger: AGGCCTTACCAACGCCGGCAACAAATGGAAACAGGA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTTTCCTGTTTCCATTaGTTGCCGGCGTTGGTAAGG +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNFSCFH*LPALVR
Trigger: CCTTACCAACGCCGGCAACAAATGGAAACAGGAAAA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATTCATGCGAGCTGTCTaGGAAATAAACACTCGGCCA +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKFMRAV*EINTRP
Trigger: TGGCCGAGTGTTTATTTCCAAGACAGCTCGCATGAA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTCATGCGAGCTGTCTaGGAAATAAACACTCGGCCA +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNFMRAV*EINTRP
Trigger: TGGCCGAGTGTTTATTTCCAAGACAGCTCGCATGAA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACCCTCTCCATTCTCCTaGACTATCTTCTCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKPSPFS*TIFSLL
Trigger: AAGAAGGGAGAAGATAGTCAAGGAGAATGGAGAGGG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCCCTCTCCATTCTCCTaGACTATCTTCTCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNPSPFS*TIFSLL
Trigger: AAGAAGGGAGAAGATAGTCAAGGAGAATGGAGAGGG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTGAAGAGGAGATCATCAGTAGAATCCACACAGAGCACAGCTTTTGTATGGTTATTTCTGTTTGTTaGAGTCGACCTTCCAGTACT +
Preference number: 5 (lower is better)
Translates to: SSEEEIISRIHTEHSFCMVISVC*SRPSST
Trigger: AGTACTGGAAGGTCGACTCAAACAAACAGAAATAAC...CATACAAAAGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCTCTTCACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGTTCTCCTTCGGGCCTaGTTCTTAGGTTTCACTTCA +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKVLLRA*FLGFTS
Trigger: TGAAGTGAAACCTAAGAACAAGGCCCGAAGGAGAAC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACATATGCCTTTCTCCTaGTTACAGGAGAAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKHMPFS*LQEKAL
Trigger: CAGAGCCTTCTCCTGTAACAAGGAGAAAGGCATATG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACTGTTCGACTGGTACTaGCAGAACAAGCATCTCCAA +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKLFDWY*QNKHLQ
Trigger: TTGGAGATGCTTGTTCTGCAAGTACCAGTCGAACAG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATAGAGGAAGGTGCCAGTaGGGTTTAGGGCAATTTGAT +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNRGRCQ*GLGQFD
Trigger: ATCAAATTGCCCTAAACCCAACTGGCACCTTCCTCT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATAGAGATCTGACCATCTaGCAAATTGCGAGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNRDLTI*QIASLP
Trigger: TGGAAGGCTCGCAATTTGCAAGATGGTCAGATCTCT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS TCA 90 bp AACACAAAGGATAATTGCTTGAGGGGATGGCTACCCCATTCTCCATaGTATGATTATTGTGCATTGCATGCCTGTATCCAAACATCTCAT +
Preference number: 5 (lower is better)
Translates to: NTKDNCLRGWLPHSP*YDYCALHACIQTSH
Trigger: ATGAGATGTTTGGATACAGGCATGCAATGCACAATAATCATATCATGGAGAATGGGGTAGCCATCCCCTCAAGCAATTATCCTTTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547733.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATATTGTCAGCATCTATTaGGGGACACACTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNIVSIY*GTHSGL
Trigger: CAAACCAGAGTGTGTCCCCAAATAGATGCTGACAAT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGTTTGCCAAGTCTGCTaGATAATTGGCTTTTTCATC +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKVCQVC*IIGFFI
Trigger: GATGAAAAAGCCAATTATCAAGCAGACTTGGCAAAC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATAGTCTCTGCAGTTCTTaGTTCATGGCTTGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNSLCSS*FMAWSF
Trigger: GAAACTCCAAGCCATGAACAAAGAACTGCAGAGACT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAGTCTCTGCAGTTCTTaGTTCATGGCTTGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKSLCSS*FMAWSF
Trigger: GAAACTCCAAGCCATGAACAAAGAACTGCAGAGACT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATTCTTTTTGAGCTGCTaGAAGTCTCTGCAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKFFLSC*KSLQFF
Trigger: AAAGAACTGCAGAGACTTCAAGCAGCTCAAAAAGAA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATTCTTGGTTTCTTTTTaGGGCTTCCAGAAGTCTAAG +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKFLVSF*GFQKSK
Trigger: CTTAGACTTCTGGAAGCCCAAAAAAGAAACCAAGAA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGTAACCTCTTCAGTTTaGCGACGTAGAACCACTTCT +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNVTSSV*RRRTTS
Trigger: AGAAGTGGTTCTACGTCGCAAAACTGAAGAGGTTAC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATTACATAGGCCACCTCAAGCACATGCAAGAAAGTTCTGCCATCATTAAAATTTTTTCCTGTTTCCATTaGTTGCCGGCGTTGGTAAGG +
Preference number: 5 (lower is better)
Translates to: NYIGHLKHMQESSAIIKIFSCFH*LPALVR
Trigger: CCTTACCAACGCCGGCAACAAATGGAAACAGGAAAA...AATTTTAATGATGGCAGAACTTTCTTGCATGTGCTTGAGGTGGCCTATGTAATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATATATCTGCCTCCATGTaGGAAATGGTCATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNISASM*EMVIFC
Trigger: GCAGAAGATGACCATTTCCAACATGGAGGCAGATAT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAGTTCCTCCCGTTGCTaGAGGAGTCTATTCATATCT +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKSSSRC*RSLFIS
Trigger: AGATATGAATAGACTCCTCAAGCAACGGGAGGAACT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGTTATTTCTGTTTGTTaGAGTCGACCTTCCAGTACT +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKVISVC*SRPSST
Trigger: AGTACTGGAAGGTCGACTCAAACAAACAGAAATAAC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGAAGCAGGAAATGGGTaGATTATGCCCCTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCEAGNG*IMPLLE
Trigger: CTCCAGAAGGGGCATAATCAACCCATTTCCTGCTTC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGAAGCAGGAAATGGGTaGATTATGCCCCTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHEAGNG*IMPLLE
Trigger: CTCCAGAAGGGGCATAATCAACCCATTTCCTGCTTC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGAAGCAGGAAATGGGTaGATTATGCCCCTGTGTACC +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSEAGNG*IMPLCT
Trigger: GGTACACAGGGGCATAATCAACCCATTTCCTGCTTC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552961.5
CDS GCA 90 bp CTAACAAGCTGTGTAATTCTGGACCTCAATGCATCAACCGTCTCTTaGATGGCTTTAATTCTTACACGCAGGTTATTATTTTCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: LTSCVILDLNASTVS*MALILTRRLLFSVC
Trigger: ACAGACTGAAAATAATAACCTGCGTGTAAGAATTAAAGCCATGCAAGAGACGGTTGATGCATTGAGGTCCAGAATTACACAGCTTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATAATGTAGATCTGCTCTaGCTGGGAGTCAATGTCAAA +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNNVDLL*LGVNVK
Trigger: TTTGACATTGACTCCCAGCAAGAGCAGATCTACATT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAAATGTAGATCTGCTCTaGCTGGGAGTCAATGTCAAA +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKNVDLL*LGVNVK
Trigger: TTTGACATTGACTCCCAGCAAGAGCAGATCTACATT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCAAATCCTGTTCCCATaGTGTATGTTTTACCAGCTC +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNQILFP*CMFYQL
Trigger: GAGCTGGTAAAACATACACAATGGGAACAGGATTTG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACAAATCCTGTTCCCATaGTGTATGTTTTACCAGCTC +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKQILFP*CMFYQL
Trigger: GAGCTGGTAAAACATACACAATGGGAACAGGATTTG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATAAGGCACTTATTACATaGCCAAGTGCCAAAAGTCCA +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNKALIT*PSAKSP
Trigger: TGGACTTTTGGCACTTGGCAATGTAATAAGTGCCTT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTGCTATCATGATTGTTaGGCTATTACCCCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSCYHDC*AITPEG
Trigger: TCCCTCGGGGGTAATAGCCAAACAATCATGATAGCA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTGCTATCATGATTGTTaGGCTATTACCCCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHCYHDC*AITPEG
Trigger: TCCCTCGGGGGTAATAGCCAAACAATCATGATAGCA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTACGAAGTGCATTGATTaGCTGACTAGCTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSTKCID*LTSSVL
Trigger: CAGGACAGAGCTAGTCAGCAAATCAATGCACTTCGT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAATTCTTCTTTCTTCTCTaGGTCAGTGTCTGTATTATC +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKFFFLL*VSVCII
Trigger: GATAATACAGACACTGACCAAGAGAAGAAAGAAGAA...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAACTGCAATTTCTTCAATaGCTTTTCATACTGAGACTG +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKLQFLQ*LFILRL
Trigger: CAGTCTCAGTATGAAAAGCAATTGAAGAAATTGCAG...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTTTTCCTGTTTCCATTaGTTGCCGGCGTTGGTAAGG +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCFSCFH*LPALVR
Trigger: CCTTACCAACGCCGGCAACAAATGGAAACAGGAAAA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTTTTCCTGTTTCCATTaGTTGCCGGCGTTGGTAAGG +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHFSCFH*LPALVR
Trigger: CCTTACCAACGCCGGCAACAAATGGAAACAGGAAAA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AAATTAATTCTGGAACAAAAGGTAGCAGATGGGATACTGAATGGAAAACAATGGTTCATGCGAGCTGTCTaGGAAATAAACACTCGGCCA +
Preference number: 5 (lower is better)
Translates to: KLILEQKVADGILNGKQWFMRAV*EINTRP
Trigger: TGGCCGAGTGTTTATTTCCAAGACAGCTCGCATGAA...CCATTGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGTTCCAGAATTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTTCATGCGAGCTGTCTaGGAAATAAACACTCGGCCA +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHFMRAV*EINTRP
Trigger: TGGCCGAGTGTTTATTTCCAAGACAGCTCGCATGAA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATTACATAGGCCACCTCAAGCACATGCAAGAAAGTTCTGCCATCATTAAAATTATATCTGCCTCCATGTaGGAAATGGTCATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: NYIGHLKHMQESSAIIKIISASM*EMVIFC
Trigger: GCAGAAGATGACCATTTCCAACATGGAGGCAGATAT...AATTTTAATGATGGCAGAACTTTCTTGCATGTGCTTGAGGTGGCCTATGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCCCTCTCCATTCTCCTaGACTATCTTCTCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCPSPFS*TIFSLL
Trigger: AAGAAGGGAGAAGATAGTCAAGGAGAATGGAGAGGG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CATACACACACAGGACTATGTGGGAAAATCTTTCTTTGTCCTCAAGATAATAATCCCTCTCCATTCTCCTaGACTATCTTCTCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: HTHTGLCGKIFLCPQDNNPSPFS*TIFSLL
Trigger: AAGAAGGGAGAAGATAGTCAAGGAGAATGGAGAGGG...ATTATTATCTTGAGGACAAAGAAAGATTTTCCCACATAGTCCTGTGTGTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCCCTCTCCATTCTCCTaGACTATCTTCTCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSPSPFS*TIFSLL
Trigger: AAGAAGGGAGAAGATAGTCAAGGAGAATGGAGAGGG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAACTGGTTATTTCTGTTaGTTTGAGTCGACCTTCCAG +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKTGYFC*FESTFQ
Trigger: CTGGAAGGTCGACTCAAACAAACAGAAATAACCAGT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATACTGGTTATTTCTGTTaGTTTGAGTCGACCTTCCAG +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNTGYFC*FESTFQ
Trigger: CTGGAAGGTCGACTCAAACAAACAGAAATAACCAGT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGTTCTCCTTCGGGCCTaGTTCTTAGGTTTCACTTCA +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHVLLRA*FLGFTS
Trigger: TGAAGTGAAACCTAAGAACAAGGCCCGAAGGAGAAC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AAATTAATTCTGGAACAAAAGGTAGCAGATGGGATACTGAATGGAAAACAATGGGTTCTCCTTCGGGCCTaGTTCTTAGGTTTCACTTCA +
Preference number: 5 (lower is better)
Translates to: KLILEQKVADGILNGKQWVLLRA*FLGFTS
Trigger: TGAAGTGAAACCTAAGAACAAGGCCCGAAGGAGAAC...CCATTGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGTTCCAGAATTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCATATGCCTTTCTCCTaGTTACAGGAGAAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCHMPFS*LQEKAL
Trigger: CAGAGCCTTCTCCTGTAACAAGGAGAAAGGCATATG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACCATATGCCTTTCTCCTaGTTACAGGAGAAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHHMPFS*LQEKAL
Trigger: CAGAGCCTTCTCCTGTAACAAGGAGAAAGGCATATG...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCACAGAGCACAGCTTTaGTATGCCCTTCAGCTATGT +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSHRAQL*YALQLC
Trigger: ACATAGCTGAAGGGCATACAAAAGCTGTGCTCTGTG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCACAGAGCACAGCTTTaGTATGCCCTTCAGCTATGT +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCHRAQL*YALQLC
Trigger: ACATAGCTGAAGGGCATACAAAAGCTGTGCTCTGTG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACCACAGAGCACAGCTTTaGTATGCCCTTCAGCTATGT +
Preference number: 5 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHHRAQL*YALQLC
Trigger: ACATAGCTGAAGGGCATACAAAAGCTGTGCTCTGTG...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCACAGAGCACAGCTTTaGTATGCCCTTCAGCTATGT +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHHRAQL*YALQLC
Trigger: ACATAGCTGAAGGGCATACAAAAGCTGTGCTCTGTG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCTGTTCGACTGGTACTaGCAGAACAAGCATCTCCAA +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHLFDWY*QNKHLQ
Trigger: TTGGAGATGCTTGTTCTGCAAGTACCAGTCGAACAG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCTGTTCGACTGGTACTaGCAGAACAAGCATCTCCAA +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCLFDWY*QNKHLQ
Trigger: TTGGAGATGCTTGTTCTGCAAGTACCAGTCGAACAG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATAGAGGAAGGTGCCAGTaGGGTTTAGGGCAATTTGAT +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHRGRCQ*GLGQFD
Trigger: ATCAAATTGCCCTAAACCCAACTGGCACCTTCCTCT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CTTTTCCCACCACAGATGATAATAGCTCTCATCATAGCTACCAAGGTTCGCAAAGTTAAGTCCCATTTCTaGATTCCATTATCTCTAGAC +
Preference number: 5 (lower is better)
Translates to: LFPPQMIIALIIATKVRKVKSHF*IPLSLD
Trigger: GTCTAGAGATAATGGAATCAAGAAATGGGACTTAAC...TTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTAGAGATCTGACCATCTaGCAAATTGCGAGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCRDLTI*QIASLP
Trigger: TGGAAGGCTCGCAATTTGCAAGATGGTCAGATCTCT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATAGAGATCTGACCATCTaGCAAATTGCGAGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHRDLTI*QIASLP
Trigger: TGGAAGGCTCGCAATTTGCAAGATGGTCAGATCTCT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAGAGATCTGACCATCTaGCAAATTGCGAGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSRDLTI*QIASLP
Trigger: TGGAAGGCTCGCAATTTGCAAGATGGTCAGATCTCT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTCCGATTCATACGTTTaGCCTAGTAAGTACAGGACA +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNSDSYV*PSKYRT
Trigger: TGTCCTGTACTTACTAGGCAAAACGTATGAATCGGA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATTACATAGGCCACCTCAAGCACATGCAAGAAAGTTCTGCCATCATTAAAATTGAAGCAGGAAATGGGTaGATTATGCCCTGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: NYIGHLKHMQESSAIIKIEAGNG*IMPCFC
Trigger: ACAAAAGCAGGGCATAATCAACCCATTTCCTGCTTC...AATTTTAATGATGGCAGAACTTTCTTGCATGTGCTTGAGGTGGCCTATGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS GCA 90 bp ATACTGAGACTGATTTTTAAGCAACCTTGCATGTTCTTTTTGAGCTaGTTGAAGTCTCTGCAGTTCTTTGTTCATGGCTTGGAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: ILRLIFKQPCMFFLS*LKSLQFFVHGLEFL
Trigger: AAGAAACTCCAAGCCATGAACAAAGAACTGCAGAGACTTCAAGCAGCTCAAAAAGAACATGCAAGGTTGCTTAAAAATCAGTCTCAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552961.5
ENST00000636569.1
CDS CCA 90 bp TTTAATTCTGCCTTCTCTTTCAACATATGGAATAAGAGCTGGTTTTaGGTAGCACTGGTTATTTCTGTTTGTTTGAGTCGACCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: FNSAFSFNIWNKSWF*VALVISVCLSRPSS
Trigger: ACTGGAAGGTCGACTCAAACAAACAGAAATAACCAGTGCTACCCAAAACCAGCTCTTATTCCATATGTTGAAAGAGAAGGCAGAATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000551066.1
ENST00000551264.5
ENST00000552475.1
ENST00000552961.5
ENST00000636569.1
CDS CCA 90 bp TCAGGATTTAATTCTGCCTTCTCTTTCAACATATGGAATAAGAGCTaGTTTTGGGTAGCACTGGTTATTTCTGTTTGTTTGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: SGFNSAFSFNIWNKS*FWVALVISVCLSRP
Trigger: AGGTCGACTCAAACAAACAGAAATAACCAGTGCTACCCAAAACCAGCTCTTATTCCATATGTTGAAAGAGAAGGCAGAATTAAATCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000551066.1
ENST00000551264.5
ENST00000552475.1
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGGGACACACTCTGGTTaGACACACATGAATGGTAAA +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCGTHSG*THMNGK
Trigger: TTTACCATTCATGTGTGTCAAACCAGAGTGTGTCCC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATATTGTCAGCATCTATTaGGGGACACACTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHIVSIY*GTHSGL
Trigger: CAAACCAGAGTGTGTCCCCAAATAGATGCTGACAAT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATATATTTCTAGCTCGATaGGCGTATTTCAGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNIFLAR*AYFRVF
Trigger: AAACACCCTGAAATACGCCAATCGAGCTAGAAATAT...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAATATTTCTAGCTCGATaGGCGTATTTCAGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKIFLAR*AYFRVF
Trigger: AAACACCCTGAAATACGCCAATCGAGCTAGAAATAT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGTTTGCCAAGTCTGCTaGATAATTGGCTTTTTCATC +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKVCQVC*IIGFFI
Trigger: GATGAAAAAGCCAATTATCAAGCAGACTTGGCAAAC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTAGTCTCTGCAGTTCTTaGTTCATGGCTTGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCSLCSS*FMAWSF
Trigger: GAAACTCCAAGCCATGAACAAAGAACTGCAGAGACT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGTAACCTCTTCAGTTTaGCGACGTAGAACCACTTCT +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSVTSSV*RRRTTS
Trigger: AGAAGTGGTTCTACGTCGCAAAACTGAAGAGGTTAC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CATACACACACAGGACTATGTGGGAAAATCTTTCTTTGTCCTCAAGATAATAATGTAACCTCTTCAGTTTaGCGACGTAGAACCACTTCT +
Preference number: 5 (lower is better)
Translates to: HTHTGLCGKIFLCPQDNNVTSSV*RRRTTS
Trigger: AGAAGTGGTTCTACGTCGCAAAACTGAAGAGGTTAC...ATTATTATCTTGAGGACAAAGAAAGATTTTCCCACATAGTCCTGTGTGTGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGTAACCTCTTCAGTTTaGCGACGTAGAACCACTTCT +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCVTSSV*RRRTTS
Trigger: AGAAGTGGTTCTACGTCGCAAAACTGAAGAGGTTAC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTATATCTGCCTCCATGTaGGAAATGGTCATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSISASM*EMVIFC
Trigger: GCAGAAGATGACCATTTCCAACATGGAGGCAGATAT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATATATCTGCCTCCATGTaGGAAATGGTCATCTTCTGC +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHISASM*EMVIFC
Trigger: GCAGAAGATGACCATTTCCAACATGGAGGCAGATAT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAGTTCCTCCCGTTGCTaGAGGAGTCTATTCATATCT +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSSSSRC*RSLFIS
Trigger: AGATATGAATAGACTCCTCAAGCAACGGGAGGAACT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTAGTTCCTCCCGTTGCTaGAGGAGTCTATTCATATCT +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCSSSRC*RSLFIS
Trigger: AGATATGAATAGACTCCTCAAGCAACGGGAGGAACT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AAATTAATTCTGGAACAAAAGGTAGCAGATGGGATACTGAATGGAAAACAATGGAGTTCCTCCCGTTGCTaGAGGAGTCTATTCATATCT +
Preference number: 5 (lower is better)
Translates to: KLILEQKVADGILNGKQWSSSRC*RSLFIS
Trigger: AGATATGAATAGACTCCTCAAGCAACGGGAGGAACT...CCATTGTTTTCCATTCAGTATCCCATCTGCTACCTTTTGTTCCAGAATTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTTCCAGTACTTTAATTaGAGCCTCTTTCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSFQYFN*SLFLGS
Trigger: GCTGCCCAGAAAGAGGCTCAAATTAAAGTACTGGAA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTTCCAGTACTTTAATTaGAGCCTCTTTCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCFQYFN*SLFLGS
Trigger: GCTGCCCAGAAAGAGGCTCAAATTAAAGTACTGGAA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAGTTATTTCTGTTTGTTaGAGTCGACCTTCCAGTACT +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKVISVC*SRPSST
Trigger: AGTACTGGAAGGTCGACTCAAACAAACAGAAATAAC...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTATTCATTCCAATCTCTaGCCCTTCTGCAACAGGTGT +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSIHSNL*PFCNRC
Trigger: ACACCTGTTGCAGAAGGGCAAGAGATTGGAATGAAT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACATTCATTCCAATCTCTaGCCCTTCTGCAACAGGTGT +
Preference number: 5 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHIHSNL*PFCNRC
Trigger: ACACCTGTTGCAGAAGGGCAAGAGATTGGAATGAAT...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATATTCATTCCAATCTCTaGCCCTTCTGCAACAGGTGT +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHIHSNL*PFCNRC
Trigger: ACACCTGTTGCAGAAGGGCAAGAGATTGGAATGAAT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAAATGTGCATTTGGAACTaGCTGAAGAAGGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKMCIWN*LKKVFL
Trigger: CAAAAAGACCTTCTTCAGCAAGTTCCAAATGCACAT...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGAAGCAGGAAATGGGTaGATTATGCCCTGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHEAGNG*IMPCFC
Trigger: ACAAAAGCAGGGCATAATCAACCCATTTCCTGCTTC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551264.5
CDS TCA 90 bp CTTACACGCAGGTTATTATTTTCAGTCTGTAGCATAGCATTCTCATaGAACATGTCATTGATGCTTTCCACACCCTCTTCGTCAATTATT +
Preference number: 5 (lower is better)
Translates to: LTRRLLFSVCSIAFS*NMSLMLSTPSSSII
Trigger: AATAATTGACGAAGAGGGTGTGGAAAGCATCAATGACATGTTTCATGAGAATGCTATGCTACAGACTGAAAATAATAACCTGCGTGTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTCCTTCAATCTTCTCTTaGGCAAGCTGTGGTCTTATT +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCPSIFS*ASCGLI
Trigger: AATAAGACCACAGCTTGCCAAAGAGAAGATTGAAGG...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTCCTTCAATCTTCTCTTaGGCAAGCTGTGGTCTTATT +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSPSIFS*ASCGLI
Trigger: AATAAGACCACAGCTTGCCAAAGAGAAGATTGAAGG...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTAATGTAGATCTGCTCTaGCTGGGAGTCAATGTCAAA +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSNVDLL*LGVNVK
Trigger: TTTGACATTGACTCCCAGCAAGAGCAGATCTACATT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTATTATCAGTTGCATaGTCAGCATCTATTTGGGGA +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNLLSVA*SASIWG
Trigger: TCCCCAAATAGATGCTGACAATGCAACTGATAATAA...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTGCATCAACCGTCTCTaGCATGGCTTTAATTCTTAC +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCCINRL*HGFNSY
Trigger: GTAAGAATTAAAGCCATGCAAGAGACGGTTGATGCA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTGCATCAACCGTCTCTaGCATGGCTTTAATTCTTAC +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHCINRL*HGFNSY
Trigger: GTAAGAATTAAAGCCATGCAAGAGACGGTTGATGCA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAATTCTTCTTTCTTCTCTaGGTCAGTGTCTGTATTATC +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKFFFLL*VSVCII
Trigger: GATAATACAGACACTGACCAAGAGAAGAAAGAAGAA...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCTGCAATTTCTTCAATaGCTTTTCATACTGAGACTG +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNLQFLQ*LFILRL
Trigger: CAGTCTCAGTATGAAAAGCAATTGAAGAAATTGCAG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp GTTAGGACATCAACAATGTTTCCCATCACAGAATATATGCACAGCACTGGAAAACAGTCTGGCTTTCTCTaGTTCTTCTTTCATTTGTTT +
Preference number: 5 (lower is better)
Translates to: VRTSTMFPITEYMHSTGKQSGFL*FFFHLF
Trigger: AAACAAATGAAAGAAGAACAAGAGAAAGCCAGACTG...TTTTCCAGTGCTGTGCATATATTCTGTGATGGGAAACATTGTTGATGTCCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATCAGTCTGGCTTTCTCTaGTTCTTCTTTCATTTGTTT +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNQSGFL*FFFHLF
Trigger: AAACAAATGAAAGAAGAACAAGAGAAAGCCAGACTG...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTACTGGTTATTTCTGTTaGTTTGAGTCGACCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCTGYFC*FESTFQ
Trigger: CTGGAAGGTCGACTCAAACAAACAGAAATAACCAGT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATACTGGTTATTTCTGTTaGTTTGAGTCGACCTTCCAG +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHTGYFC*FESTFQ
Trigger: CTGGAAGGTCGACTCAAACAAACAGAAATAACCAGT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CCAGGTGTGTTTTCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATGTTAAGTCCCATTTCTaGATTCCATTATCTCTAGAC +
Preference number: 5 (lower is better)
Translates to: PGVFSDCHKSRRLGNSNNVKSHF*IPLSLD
Trigger: GTCTAGAGATAATGGAATCAAGAAATGGGACTTAAC...ATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGAAAACACACCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTCCGATTCATACGTTTaGCCTAGTAAGTACAGGACA +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSSDSYV*PSKYRT
Trigger: TGTCCTGTACTTACTAGGCAAAACGTATGAATCGGA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTTTACCAGCTCCAGTTaGTCCATAAGCAAAAACTGT +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHFTSSS*SISKNC
Trigger: ACAGTTTTTGCTTATGGACAAACTGGAGCTGGTAAA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTTTACCAGCTCCAGTTaGTCCATAAGCAAAAACTGT +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSFTSSS*SISKNC
Trigger: ACAGTTTTTGCTTATGGACAAACTGGAGCTGGTAAA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGTTTGCCAAGTCTGCTaGATAATTGGCTTTTTCATC +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSVCQVC*IIGFFI
Trigger: GATGAAAAAGCCAATTATCAAGCAGACTTGGCAAAC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTTCTTTTTGAGCTGCTaGAAGTCTCTGCAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCFFLSC*KSLQFF
Trigger: AAAGAACTGCAGAGACTTCAAGCAGCTCAAAAAGAA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTTCTTTTTGAGCTGCTaGAAGTCTCTGCAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHFFLSC*KSLQFF
Trigger: AAAGAACTGCAGAGACTTCAAGCAGCTCAAAAAGAA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTTCTTGGTTTCTTTTTaGGGCTTCCAGAAGTCTAAG +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHFLVSF*GFQKSK
Trigger: CTTAGACTTCTGGAAGCCCAAAAAAGAAACCAAGAA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CATACACACACAGGACTATGTGGGAAAATCTTTCTTTGTCCTCAAGATAATAATTTCTTGGTTTCTTTTTaGGGCTTCCAGAAGTCTAAG +
Preference number: 5 (lower is better)
Translates to: HTHTGLCGKIFLCPQDNNFLVSF*GFQKSK
Trigger: CTTAGACTTCTGGAAGCCCAAAAAAGAAACCAAGAA...ATTATTATCTTGAGGACAAAGAAAGATTTTCCCACATAGTCCTGTGTGTGTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTTTCTTGGTTTCTTTTTaGGGCTTCCAGAAGTCTAAG +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSFLVSF*GFQKSK
Trigger: CTTAGACTTCTGGAAGCCCAAAAAAGAAACCAAGAA...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTGTTATTTCTGTTTGTTaGAGTCGACCTTCCAGTACT +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCVISVC*SRPSST
Trigger: AGTACTGGAAGGTCGACTCAAACAAACAGAAATAAC...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTGTTATTTCTGTTTGTTaGAGTCGACCTTCCAGTACT +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSVISVC*SRPSST
Trigger: AGTACTGGAAGGTCGACTCAAACAAACAGAAATAAC...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATATGTGCATTTGGAACTaGCTGAAGAAGGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHMCIWN*LKKVFL
Trigger: CAAAAAGACCTTCTTCAGCAAGTTCCAAATGCACAT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTATGTGCATTTGGAACTaGCTGAAGAAGGTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSMCIWN*LKKVFL
Trigger: CAAAAAGACCTTCTTCAGCAAGTTCCAAATGCACAT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATTTATTATCAGTTGCATaGTCAGCATCTATTTGGGGA +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHLLSVA*SASIWG
Trigger: TCCCCAAATAGATGCTGACAATGCAACTGATAATAA...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTTATTATCAGTTGCATaGTCAGCATCTATTTGGGGA +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCLLSVA*SASIWG
Trigger: TCCCCAAATAGATGCTGACAATGCAACTGATAATAA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTACCATCACCTTATTCTaGATATTTCTAGCTCGATTG +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCTITLF*IFLARL
Trigger: CAATCGAGCTAGAAATATCAAGAATAAGGTGATGGT...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCCAGTCAACAACTTTTAAAAATTCATACAGGCACAACACAAGATAGTCTCTCTACCATCACCTTATTCTaGATATTTCTAGCTCGATTG +
Preference number: 5 (lower is better)
Translates to: SSQQLLKIHTGTTQDSLSTITLF*IFLARL
Trigger: CAATCGAGCTAGAAATATCAAGAATAAGGTGATGGT...AGAGAGACTATCTTGTGTTGTGCCTGTATGAATTTTTAAAAGTTGTTGACTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATACCATCACCTTATTCTaGATATTTCTAGCTCGATTG +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHTITLF*IFLARL
Trigger: CAATCGAGCTAGAAATATCAAGAATAAGGTGATGGT...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp TCTGACTGTCACAAAAGCAGACGTCTTGGTAATTCAAATAATTTGAAAGTGTGTTTCTTCTTTCTTCTCTaGGTCAGTGTCTGTATTATC +
Preference number: 5 (lower is better)
Translates to: SDCHKSRRLGNSNNLKVCFFFLL*VSVCII
Trigger: GATAATACAGACACTGACCAAGAGAAGAAAGAAGAA...ACACACTTTCAAATTATTTGAATTACCAAGACGTCTGCTTTTGTGACAGTCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCTGCAATTTCTTCAATaGCTTTTCATACTGAGACTG +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHLQFLQ*LFILRL
Trigger: CAGTCTCAGTATGAAAAGCAATTGAAGAAATTGCAG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp CAATATTCCTCAGTGCAGAGATGTATTCATTCCATAAATTATCTGCTAGATCACCTGCAATTTCTTCAATaGCTTTTCATACTGAGACTG +
Preference number: 5 (lower is better)
Translates to: QYSSVQRCIHSINYLLDHLQFLQ*LFILRL
Trigger: CAGTCTCAGTATGAAAAGCAATTGAAGAAATTGCAG...GTGATCTAGCAGATAATTTATGGAATGAATACATCTCTGCACTGAGGAATATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547108.5
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATCAGTCTGGCTTTCTCTaGTTCTTCTTTCATTTGTTT +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHQSGFL*FFFHLF
Trigger: AAACAAATGAAAGAAGAACAAGAGAAAGCCAGACTG...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000552961.5
ENST00000636569.1
CDS-3UTR CAA 90 bp AATCTACCTATTTACATAGCTTTTCCCACCACAGATGATAATAGCTCTCATCATGTTAAGTCCCATTTCTaGATTCCATTATCTCTAGAC +
Preference number: 5 (lower is better)
Translates to: NLPIYIAFPTTDDNSSHHVKSHF*IPLSLD
Trigger: GTCTAGAGATAATGGAATCAAGAAATGGGACTTAAC...ATGATGAGAGCTATTATCATCTGTGGTGGGAAAAGCTATGTAAATAGGTAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS CAA 90 bp CGTCCGGGGCGCCCAACATGCTGGCGGCGGGCAGCGATCGAGCCGTaGGGCCTCGGCACCGCAGAGCTGAGGCGCCACTGGGGCCGCGGG +
Preference number: 6 (lower is better)
Translates to: RPGRPTCWRRAAIEP*GLGTAELRRHWGRG
Trigger: CCCGCGGCCCCAGTGGCGCCTCAGCTCTGCGGTGCCGAGGCCCAACGGCTCGATCGCTGCCCGCCGCCAGCATGTTGGGCGCCCCGGACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000544797.6
CDS TCA 72 bp CAGCGATCGAGCCGTTGGGCCTCGGCACCGCAGAGCTaGGGCGCCACTGGGGCCGCGGGACTCGGGCGCAGT +
Preference number: 6 (lower is better)
Translates to: QRSSRWASAPQS*GATGAAGLGRS
Trigger: ACTGCGCCCGAGTCCCGCGGCCCCAGTGGCGCCTCAGCTCTGCGGTGCCGAGGCCCAACGGCTCGATCGCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000544797.6
CDS GCA 72 bp CCACCCGCACGGAGCTCTCGTCCGGGGCGCCCAACATaGTGGCGGCGGGCAGCGATCGAGCCGTTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: PPARSSRPGRPT*WRRAAIEPLGL
Trigger: GAGGCCCAACGGCTCGATCGCTGCCCGCCGCCAGCATGTTGGGCGCCCCGGACGAGAGCTCCGTGCGGGTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000544797.6
CDS CAA 72 bp CGCCCAACATGCTGGCGGCGGGCAGCGATCGAGCCGTaGGGCCTCGGCACCGCAGAGCTGAGGCGCCACTGG +
Preference number: 6 (lower is better)
Translates to: RPTCWRRAAIEP*GLGTAELRRHW
Trigger: CCAGTGGCGCCTCAGCTCTGCGGTGCCGAGGCCCAACGGCTCGATCGCTGCCCGCCGCCAGCATGTTGGGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000544797.6
CDS CCA 72 bp GGCGGCCGGCTCACCTCCGCCGCGCTCCAGCCATGTTaGGCGACTGAATGGAAAGGTGGCGGCGGCGCTGAG +
Preference number: 6 (lower is better)
Translates to: GGRLTSAALQPC*ATEWKGGGGAE
Trigger: CTCAGCGCCGCCGCCACCTTTCCATTCAGTCGCCCAACATGGCTGGAGCGCGGCGGAGGTGAGCCGGCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361961.7
CDS CCA 72 bp ACCTCCGCCGCGCTCCAGCCATGTTGGGCGACTGAATaGAAAGGTGGCGGCGGCGCTGAGGCAGCAAGAGGA +
Preference number: 6 (lower is better)
Translates to: TSAALQPCWATE*KGGGGAEAARG
Trigger: TCCTCTTGCTGCCTCAGCGCCGCCGCCACCTTTCCATTCAGTCGCCCAACATGGCTGGAGCGCGGCGGAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361961.7
CDS CCA 72 bp GCCCCCTCTGCAGCCACTGAGCAAAACTGGGTGGTCTaGCACCACTCCCAGGGCACAGACCCAATCCTTATG +
Preference number: 6 (lower is better)
Translates to: APSAATEQNWVV*HHSQGTDPILM
Trigger: CATAAGGATTGGGTCTGTGCCCTGGGAGTGGTGCCAGACCACCCAGTTTTGCTCAGTGGCTGCAGAGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547733.1
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS CAA 90 bp GGACTCTCGCCACAGGAATTCTCATTTTCTGCTGGGCTCCTGTCCTaGATGCATCTGTTTCGACAGCAGCTGCACTGGAACCTGTGTCCT +
Preference number: 6 (lower is better)
Translates to: GLSPQEFSFSAGLLS*MHLFRQQLHWNLCP
Trigger: AGGACACAGGTTCCAGTGCAGCTGCTGTCGAAACAGATGCATCAAGGACAGGAGCCCAGCAGAAAATGAGAATTCCTGTGGCGAGAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS CCA 72 bp GCCTGGACTCTCGCCACAGGAATTCTCATTTTCTGCTaGGCTCCTGTCCTTGATGCATCTGTTTCGACAGCA +
Preference number: 6 (lower is better)
Translates to: AWTLATGILIFC*APVLDASVSTA
Trigger: TGCTGTCGAAACAGATGCATCAAGGACAGGAGCCCAGCAGAAAATGAGAATTCCTGTGGCGAGAGTCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS CAA 72 bp CTGCGCTCAAGGAGCTGCCACTTCATGCGAGCTGTCTaGGAAATAAACACTCGGCCAGTCAATCCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: LRSRSCHFMRAV*EINTRPVNPFL
Trigger: GAGGAAAGGATTGACTGGCCGAGTGTTTATTTCCAAGACAGCTCGCATGAAGTGGCAGCTCCTTGAGCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS TCA 72 bp TGCACTGGAACCTGTGTCCTGAGCAGGTGCATCAGATaGACTCAGCTTCCGAGTAACTTTCCCAGCCACTTT +
Preference number: 6 (lower is better)
Translates to: CTGTCVLSRCIR*TQLPSNFPSHF
Trigger: AAAGTGGCTGGGAAAGTTACTCGGAAGCTGAGTTCATCTGATGCACCTGCTCAGGACACAGGTTCCAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS TCA 72 bp CACAGGAATTCTCATTTTCTGCTGGGCTCCTGTCCTTaGTGCATCTGTTTCGACAGCAGCTGCACTGGAACC +
Preference number: 6 (lower is better)
Translates to: HRNSHFLLGSCP*CICFDSSCTGT
Trigger: GGTTCCAGTGCAGCTGCTGTCGAAACAGATGCATCAAGGACAGGAGCCCAGCAGAAAATGAGAATTCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS CCA 72 bp TACCCCCGAGGGAATCCTGTAGTAGTCTTGTTAGCTTaGAATCTCTATAGGGGACATGTGTGGCCCTCTTGC +
Preference number: 6 (lower is better)
Translates to: YPRGNPVVVLLA*NLYRGHVWPSC
Trigger: GCAAGAGGGCCACACATGTCCCCTATAGAGATTCCAAGCTAACAAGACTACTACAGGATTCCCTCGGGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS CCA 72 bp TTCCTGTTTCCATTTGTTGCCGGCGTTGGTAAGGCCTaGACTCTCGCCACAGGAATTCTCATTTTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: FLFPFVAGVGKA*TLATGILIFCW
Trigger: CCAGCAGAAAATGAGAATTCCTGTGGCGAGAGTCCAGGCCTTACCAACGCCGGCAACAAATGGAAACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS CAA 72 bp CCACAGGAATTCTCATTTTCTGCTGGGCTCCTGTCCTaGATGCATCTGTTTCGACAGCAGCTGCACTGGAAC +
Preference number: 6 (lower is better)
Translates to: PQEFSFSAGLLS*MHLFRQQLHWN
Trigger: GTTCCAGTGCAGCTGCTGTCGAAACAGATGCATCAAGGACAGGAGCCCAGCAGAAAATGAGAATTCCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS TCA 72 bp ACTCAGCTTCCGAGTAACTTTCCCAGCCACTTTATCTaGCATGGGTCTTACTTGCCGACGAAGAGCCGTAAC +
Preference number: 6 (lower is better)
Translates to: TQLPSNFPSHFI*HGSYLPTKSRN
Trigger: GTTACGGCTCTTCGTCGGCAAGTAAGACCCATGTCAGATAAAGTGGCTGGGAAAGTTACTCGGAAGCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS GCA 72 bp TGCATGATGATGTCTGTGACCCTGCGCTCAAGGAGCTaGCACTTCATGCGAGCTGTCTTGGAAATAAACACT +
Preference number: 6 (lower is better)
Translates to: CMMMSVTLRSRS*HFMRAVLEINT
Trigger: AGTGTTTATTTCCAAGACAGCTCGCATGAAGTGGCAGCTCCTTGAGCGCAGGGTCACAGACATCATCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS TCA 72 bp GCTAGTTCACTGCTATCTGCATACAGCAATTCCATCTaGGTGGTGGTTCTCCTTCGGGCCTTGTTCTTAGGT +
Preference number: 6 (lower is better)
Translates to: ASSLLSAYSNSI*VVVLLRALFLG
Trigger: ACCTAAGAACAAGGCCCGAAGGAGAACCACCACTCAGATGGAATTGCTGTATGCAGATAGCAGTGAACTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS GCA 72 bp GCCTGTAGCTCCAGTACGCTTCAGTCTTTCAGATCCTaGGAGATCAACAAAATGGAACTTTGCAGTCAGGGT +
Preference number: 6 (lower is better)
Translates to: ACSSSTLQSFRS*EINKMELCSQG
Trigger: ACCCTGACTGCAAAGTTCCATTTTGTTGATCTCGCAGGATCTGAAAGACTGAAGCGTACTGGAGCTACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS GCA 72 bp ACTTTCCCAGCCACTTTATCTGACATGGGTCTTACTTaGCGACGAAGAGCCGTAACCTCTTCAGTTTTGCGA +
Preference number: 6 (lower is better)
Translates to: TFPATLSDMGLT*RRRAVTSSVLR
Trigger: TCGCAAAACTGAAGAGGTTACGGCTCTTCGTCGGCAAGTAAGACCCATGTCAGATAAAGTGGCTGGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000544797.6
ENST00000546817.1
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS GCA 72 bp TGGCACCACTCCCAGGGCACAGACCCAATCCTTATGTaGATTTGGAACTTGCTGAAGAAGGTCTTTTTGAGT +
Preference number: 6 (lower is better)
Translates to: WHHSQGTDPILM*IWNLLKKVFLS
Trigger: ACTCAAAAAGACCTTCTTCAGCAAGTTCCAAATGCACATAAGGATTGGGTCTGTGCCCTGGGAGTGGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547733.1
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS GCA 72 bp GTATCGGGCTTCTGTAAGGGTGCAGGCATTAATGACTaGAGTAACATCCAATGTCTCACCTTCTTCCCCAAG +
Preference number: 6 (lower is better)
Translates to: VSGFCKGAGIND*SNIQCLTFFPK
Trigger: CTTGGGGAAGAAGGTGAGACATTGGATGTTACTGCAGTCATTAATGCCTGCACCCTTACAGAAGCCCGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552475.1
CDS CAA 72 bp TTCCCCCAGATCTCCTGTGTCAGAGATCTGACCATCTaGCAAATTGCGAGCCTTCCAAATTCTCACAGTTCG +
Preference number: 6 (lower is better)
Translates to: FPQISCVRDLTI*QIASLPNSHSS
Trigger: CGAACTGTGAGAATTTGGAAGGCTCGCAATTTGCAAGATGGTCAGATCTCTGACACAGGAGATCTGGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547733.1
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS CAA 90 bp GGCAATATCTTCCCCCAGATCTCCTGTGTCAGAGATCTGACCATCTaGCAAATTGCGAGCCTTCCAAATTCTCACAGTTCGATCATCAGC +
Preference number: 6 (lower is better)
Translates to: GNIFPQISCVRDLTI*QIASLPNSHSSIIS
Trigger: GCTGATGATCGAACTGTGAGAATTTGGAAGGCTCGCAATTTGCAAGATGGTCAGATCTCTGACACAGGAGATCTGGGGGAAGATATTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547733.1
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS TCA 72 bp GAGCCAGTGATGATTAGATCTTGTCCACTGGAAATCTaGTCCACAGTAAGGCACATAACAGGGCCTAGGTGT +
Preference number: 6 (lower is better)
Translates to: EPVMIRSCPLEI*STVRHITGPRC
Trigger: ACACCTAGGCCCTGTTATGTGCCTTACTGTGGATCAGATTTCCAGTGGACAAGATCTAATCATCACTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547733.1
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS TCA 72 bp GCAATATCTTCCCCCAGATCTCCTGTGTCAGAGATCTaGCCATCTTGCAAATTGCGAGCCTTCCAAATTCTC +
Preference number: 6 (lower is better)
Translates to: AISSPRSPVSEI*PSCKLRAFQIL
Trigger: GAGAATTTGGAAGGCTCGCAATTTGCAAGATGGTCAGATCTCTGACACAGGAGATCTGGGGGAAGATATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547733.1
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS GCA 72 bp GTATCGGGCTTCTGTAAGGGTGCAGGCATTAATGACTaGAGTAACATCCAATGTCTCACCTTCTTCCTTTGC +
Preference number: 6 (lower is better)
Translates to: VSGFCKGAGIND*SNIQCLTFFLC
Trigger: GCAAAGGAAGAAGGTGAGACATTGGATGTTACTGCAGTCATTAATGCCTGCACCCTTACAGAAGCCCGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000551066.1
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS CCA 72 bp GTCTTGTTAGCTTGGAATCTCTATAGGGGACATGTGTaGCCCTCTTGCTCTTGTCTCCCAAGGCACTTATTA +
Preference number: 6 (lower is better)
Translates to: VLLAWNLYRGHV*PSCSCLPRHLL
Trigger: TAATAAGTGCCTTGGGAGACAAGAGCAAGAGGGCCACACATGTCCCCTATAGAGATTCCAAGCTAACAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS GCA 72 bp GAGTTCCTCCCGTTGCTTGAGGAGTCTATTCATATCTaGCTCCATGTTGGAAATGGTCATCTTCTGCATGAT +
Preference number: 6 (lower is better)
Translates to: EFLPLLEESIHI*LHVGNGHLLHD
Trigger: ATCATGCAGAAGATGACCATTTCCAACATGGAGGCAGATATGAATAGACTCCTCAAGCAACGGGAGGAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000552961.5
ENST00000636569.1
CDS GCA 72 bp GATCTCCTGTGTCAGAGATCTGACCATCTTGCAAATTaGGAGCCTTCCAAATTCTCACAGTTCGATCATCAG +
Preference number: 6 (lower is better)
Translates to: DLLCQRSDHLAN*EPSKFSQFDHQ
Trigger: CTGATGATCGAACTGTGAGAATTTGGAAGGCTCGCAATTTGCAAGATGGTCAGATCTCTGACACAGGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547733.1
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS TCA 72 bp TTGCTTGAGGGGATGGCTACCCCATTCTCCATGATATaGTTATTGTGCATTGCATGCCTGTATCCAAACATC +
Preference number: 6 (lower is better)
Translates to: LLEGMATPFSMI*LLCIACLYPNI
Trigger: GATGTTTGGATACAGGCATGCAATGCACAATAATCATATCATGGAGAATGGGGTAGCCATCCCCTCAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547733.1
CDS CAA 90 bp ACTGGTTATTTCTGTTTGTTTGAGTCGACCTTCCAGTACTTTAATTaGAGCCTCTTTCTGGGCAGCCTGAAGACCCTTATTGATGCCCAT +
Preference number: 6 (lower is better)
Translates to: TGYFCLFESTFQYFN*SLFLGSLKTLIDAH
Trigger: ATGGGCATCAATAAGGGTCTTCAGGCTGCCCAGAAAGAGGCTCAAATTAAAGTACTGGAAGGTCGACTCAAACAAACAGAAATAACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000551066.1
ENST00000551264.5
ENST00000552475.1
ENST00000552961.5
ENST00000636569.1
CDS TCA 72 bp GATAATTGCTTGAGGGGATGGCTACCCCATTCTCCATaGTATGATTATTGTGCATTGCATGCCTGTATCCAA +
Preference number: 6 (lower is better)
Translates to: DNCLRGWLPHSP*YDYCALHACIQ
Trigger: TTGGATACAGGCATGCAATGCACAATAATCATATCATGGAGAATGGGGTAGCCATCCCCTCAAGCAATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547733.1
CDS TCA 72 bp CGGGATAAAGCACCCAACTTCAAACACTGCATCATCTaGAAAAGGGGAAGAAACAAGGACTCTGATTCTGTA +
Preference number: 6 (lower is better)
Translates to: RDKAPNFKHCII*KRGRNKDSDSV
Trigger: TACAGAATCAGAGTCCTTGTTTCTTCCCCTTTTTCAGATGATGCAGTGTTTGAAGTTGGGTGCTTTATCCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552908.1
CDS CAA 72 bp TTCTGTTTGTTTGAGTCGACCTTCCAGTACTTTAATTaGAGCCTCTTTCTGGGCAGCCTGAAGACCCTTATT +
Preference number: 6 (lower is better)
Translates to: FCLFESTFQYFN*SLFLGSLKTLI
Trigger: AATAAGGGTCTTCAGGCTGCCCAGAAAGAGGCTCAAATTAAAGTACTGGAAGGTCGACTCAAACAAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000551066.1
ENST00000551264.5
ENST00000552475.1
ENST00000552961.5
ENST00000636569.1
CDS GCA 72 bp CTGATCACTAACAAGCTGTGTAATTCTGGACCTCAATaGATCAACCGTCTCTTGCATGGCTTTAATTCTTAC +
Preference number: 6 (lower is better)
Translates to: LITNKLCNSGPQ*INRLLHGFNSY
Trigger: GTAAGAATTAAAGCCATGCAAGAGACGGTTGATGCATTGAGGTCCAGAATTACACAGCTTGTTAGTGATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS GCA 72 bp GGCTACCCCATTCTCCATGATATGATTATTGTGCATTaGATGCCTGTATCCAAACATCTCATGTACTCCATA +
Preference number: 6 (lower is better)
Translates to: GYPILHDMIIVH*MPVSKHLMYSI
Trigger: TATGGAGTACATGAGATGTTTGGATACAGGCATGCAATGCACAATAATCATATCATGGAGAATGGGGTAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547733.1
CDS CAA 90 bp ACTAACAAGCTGTGTAATTCTGGACCTCAATGCATCAACCGTCTCTaGCATGGCTTTAATTCTTACACGCAGGTTATTATTTTCAGTCTG +
Preference number: 6 (lower is better)
Translates to: TNKLCNSGPQCINRL*HGFNSYTQVIIFSL
Trigger: CAGACTGAAAATAATAACCTGCGTGTAAGAATTAAAGCCATGCAAGAGACGGTTGATGCATTGAGGTCCAGAATTACACAGCTTGTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS GCA 72 bp CTGATTTTTAAGCAACCTTGCATGTTCTTTTTGAGCTaGTTGAAGTCTCTGCAGTTCTTTGTTCATGGCTTG +
Preference number: 6 (lower is better)
Translates to: LIFKQPCMFFLS*LKSLQFFVHGL
Trigger: CAAGCCATGAACAAAGAACTGCAGAGACTTCAAGCAGCTCAAAAAGAACATGCAAGGTTGCTTAAAAATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552961.5
ENST00000636569.1
CDS CCA 72 bp GCCTTCTCTTTCAACATATGGAATAAGAGCTGGTTTTaGGTAGCACTGGTTATTTCTGTTTGTTTGAGTCGA +
Preference number: 6 (lower is better)
Translates to: AFSFNIWNKSWF*VALVISVCLSR
Trigger: TCGACTCAAACAAACAGAAATAACCAGTGCTACCCAAAACCAGCTCTTATTCCATATGTTGAAAGAGAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547108.5
ENST00000551066.1
ENST00000551264.5
ENST00000552475.1
ENST00000552961.5
ENST00000636569.1
CDS CAA 72 bp CTGTGTAATTCTGGACCTCAATGCATCAACCGTCTCTaGCATGGCTTTAATTCTTACACGCAGGTTATTATT +
Preference number: 6 (lower is better)
Translates to: LCNSGPQCINRL*HGFNSYTQVII
Trigger: AATAATAACCTGCGTGTAAGAATTAAAGCCATGCAAGAGACGGTTGATGCATTGAGGTCCAGAATTACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS CAA 72 bp ATTTTTAAGCAACCTTGCATGTTCTTTTTGAGCTGCTaGAAGTCTCTGCAGTTCTTTGTTCATGGCTTGGAG +
Preference number: 6 (lower is better)
Translates to: IFKQPCMFFLSC*KSLQFFVHGLE
Trigger: CTCCAAGCCATGAACAAAGAACTGCAGAGACTTCAAGCAGCTCAAAAAGAACATGCAAGGTTGCTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552961.5
ENST00000636569.1
CDS TCA 72 bp ATTCTTTTACCTGTTTTGTACTCCATGAGCTCCATCTaGAGTCGTGTGATTTCACTACGAAGTGCATTGATT +
Preference number: 6 (lower is better)
Translates to: ILLPVLYSMSSI*SRVISLRSALI
Trigger: AATCAATGCACTTCGTAGTGAAATCACACGACTTCAGATGGAGCTCATGGAGTACAAAACAGGTAAAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS TCA 72 bp AGGTTATTATTTTCAGTCTGTAGCATAGCATTCTCATaGAACATGTCATTGATGCTTTCCACACCCTCTTCG +
Preference number: 6 (lower is better)
Translates to: RLLFSVCSIAFS*NMSLMLSTPSS
Trigger: CGAAGAGGGTGTGGAAAGCATCAATGACATGTTTCATGAGAATGCTATGCTACAGACTGAAAATAATAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS TCA 72 bp ATAATTGGATTGTTTGCAACACAAAGGATAATTGCTTaGGGGGATGGCTACCCCATTCTCCATGATATGATT +
Preference number: 6 (lower is better)
Translates to: IIGLFATQRIIA*GDGYPILHDMI
Trigger: AATCATATCATGGAGAATGGGGTAGCCATCCCCTCAAGCAATTATCCTTTGTGTTGCAAACAATCCAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547733.1
CDS CCA 72 bp ATTGATAGGACTATCATGACCCTTCATCTCTCCCACTaGCATAAAAGTATCCATGTTCCAGACTTTCAAAAT +
Preference number: 6 (lower is better)
Translates to: IDRTIMTLHLSH*HKSIHVPDFQN
Trigger: ATTTTGAAAGTCTGGAACATGGATACTTTTATGCCAGTGGGAGAGATGAAGGGTCATGATAGTCCTATCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000547733.1
ENST00000551264.5
ENST00000552961.5
ENST00000636569.1
CDS GCA 72 bp TGGAGTATATCAACTAATCAGGCATCTGCTAACAGCTaGATTCTGCAAAGAGCAAAGACTATAATACATCTA +
Preference number: 6 (lower is better)
Translates to: WSISTNQASANS*ILQRAKTIIHL
Trigger: TAGATGTATTATAGTCTTTGCTCTTTGCAGAATGCAGCTGTTAGCAGATGCCTGATTAGTTGATATACTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547733.1
CDS CAA 72 bp TTGACCATCACCTTATTCTTGATATTTCTAGCTCGATaGGCGTATTTCAGGGTGTTTAACGTTTCCATAAAG +
Preference number: 6 (lower is better)
Translates to: LTITLFLIFLAR*AYFRVFNVSIK
Trigger: CTTTATGGAAACGTTAAACACCCTGAAATACGCCAATCGAGCTAGAAATATCAAGAATAAGGTGATGGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361418.10
ENST00000361961.7
ENST00000541463.6
ENST00000544797.6
ENST00000552908.1
ENST00000636569.1
CDS CAA 72 bp CTAACCAAAGGGCTGAAATATCACCATGGACAACTGTaGAACACTAAGCCCAACAAACAGAAATATTATAAC +
Preference number: 6 (lower is better)
Translates to: LTKGLKYHHGQL*NTKPNKQKYYN
Trigger: GTTATAATATTTCTGTTTGTTGGGCTTAGTGTTCAACAGTTGTCCATGGTGATATTTCAGCCCTTTGGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550429.1
CDS CCA 72 bp AACATGGAAACATGCAGTTTTGCTGCACGTTTAAAGTaGGCAATTCTTATTTCTGTGGGATTCATATATTTC +
Preference number: 6 (lower is better)
Translates to: NMETCSFAARLK*AILISVGFIYF
Trigger: GAAATATATGAATCCCACAGAAATAAGAATTGCCCACTTTAAACGTGCAGCAAAACTGCATGTTTCCATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546817.1