RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA1549 (Homo sapiens)

Ensembl gene IDs: ENSG00000122778

Ensembl transcript IDs: ENST00000422774.2, ENST00000440172.5

Found 1351 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCTCTGCCGAGCAACCTTTCCTATTAACGCTAGCCAGACTCCCTaGGTCCCAGAGATGCTCCGGAGGAGGGCAAAGTCGAGGGCGTTC +
Preference number: 1 (lower is better)
Translates to: QLCRATFPINASQTP*VPEMLRRRAKSRAF
Trigger: GAACGCCCTCGACTTTGCCCTCCTCCGGAGCATCTCTGGGACGCAGGGAGTCTGGCTAGCGTTAATAGGAAAGGTTGCTCGGCAGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp CAACCTTTCCTATTAACGCTAGCCAGACTCCCTGCGTCCCAGAGATaGTCCGGAGGAGGGCAAAGTCGAGGGCGTTCCCACTCCCCTTTT +
Preference number: 1 (lower is better)
Translates to: QPFLLTLARLPASQR*SGGGQSRGRSHSPF
Trigger: AAAAGGGGAGTGGGAACGCCCTCGACTTTGCCCTCCTCCGGAGCATCTCTGGGACGCAGGGAGTCTGGCTAGCGTTAATAGGAAAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp AACTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTaGTTTATGACCACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCT +
Preference number: 1 (lower is better)
Translates to: NCCGRRREEASTNCV*FMTTSRGLVIRGPA
Trigger: AGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTGGTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 90 bp CTTTATGCTCCCTCCTCACAGGACATCTGCACACATGATCACATCTaGTTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTG +
Preference number: 1 (lower is better)
Translates to: LYAPSSQDICTHDHI*FSQLRCLGGGGGGL
Trigger: CAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATGTGATCATGTGTGCAGATGTCCTGTGAGGAGGGAGCATAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp AGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTaGCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGA +
Preference number: 1 (lower is better)
Translates to: RPTLSSSFHAICLGS*PAFKVTSEVDVSPR
Trigger: TCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 90 bp GCCTCCCCCACACTGGAGTACTTCCTCTGTAGATCTTCACAGCCCTaGTCGTTTCCTTGCTGCATGACTGCAAAAGCATCCTTCCAGCAC +
Preference number: 1 (lower is better)
Translates to: ASPTLEYFLCRSSQP*SFPCCMTAKASFQH
Trigger: GTGCTGGAAGGATGCTTTTGCAGTCATGCAGCAAGGAAACGACCAGGGCTGTGAAGATCTACAGAGGAAGTACTCCAGTGTGGGGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 90 bp CCTTCACCCGTGCTTTGCCTCACAGTCCGCATGCCAGGAAAGATCTaGCCGGCAAACACCCACTGCTTAAAAGTCATCTGCCACCCAAAT +
Preference number: 1 (lower is better)
Translates to: PSPVLCLTVRMPGKI*PANTHCLKVICHPN
Trigger: ATTTGGGTGGCAGATGACTTTTAAGCAGTGGGTGTTTGCCGGCCAGATCTTTCCTGGCATGCGGACTGTGAGGCAAAGCACGGGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 90 bp GCACCTTGCTCCGGAGGTAGAAATGACCACGGTGAAAACTCCACTTaGGCTAAAGTTAGCGTGGGAGTTAAGACCGGAGTCCTCCTTCCC +
Preference number: 1 (lower is better)
Translates to: APCSGGRNDHGENST*AKVSVGVKTGVLLP
Trigger: GGGAAGGAGGACTCCGGTCTTAACTCCCACGCTAACTTTAGCTCAAGTGGAGTTTTCACCGTGGTCATTTCTACCTCCGGAGCAAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp TGTGTGCTTTATGACCACCAGCAGAGGGCTGGTGATCCGGGGGCCTaGTCACACCACACCATAACCACCGGCTGTTTATTATACATCATC +
Preference number: 1 (lower is better)
Translates to: CVLYDHQQRAGDPGA*SHHTITTGCLLYII
Trigger: GATGATGTATAATAAACAGCCGGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTGGTCATAAAGCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 90 bp ACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGTTTaGCTTATGGGGAGAATGAAGTTCAGAGAAGGAACCAGACATGGT +
Preference number: 1 (lower is better)
Translates to: TTTVPGRWRGRSVLV*LMGRMKFREGTRHG
Trigger: ACCATGTCTGGTTCCTTCTCTGAACTTCATTCTCCCCATAAGCCAAACAAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp CTAAATTGCAACTTGCTCCCTCCCTTGGGCAGGCTGCCCGAGAGTTaGTCCTTCCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGG +
Preference number: 1 (lower is better)
Translates to: LNCNLLPPLGRLPES*SFLFQTPTQLISFW
Trigger: CCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGGAAGGAGCAACTCTCGGGCAGCCTGCCCAAGGGAGGGAGCAAGTTGCAATTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 90 bp CAAAGTCGAGGGCGTTCCCACTCCCCTTTTCTGAAACAAGTCCTCTaGTGCTTAGAGCAACTGAATGAATGGGTGGAGCCTCAGTTCCTC +
Preference number: 1 (lower is better)
Translates to: QSRGRSHSPFLKQVL*CLEQLNEWVEPQFL
Trigger: GAGGAACTGAGGCTCCACCCATTCATTCAGTTGCTCTAAGCACCAGAGGACTTGTTTCAGAAAAGGGGAGTGGGAACGCCCTCGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 90 bp GAGGATCGCCTGATAAGATGCTGCTGGTCCTTTGTTGAACGTCCTTaGGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCA +
Preference number: 1 (lower is better)
Translates to: EDRLIRCCWSFVERP*ETYSPALLLFQRCP
Trigger: TGGGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAACAAAGGACCAGCAGCATCTTATCAGGCGATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 90 bp AGGTTACCATTTTTAGCACACTCTATGTGCAAGCCTGTATGGCCCTaGGCGGAACTGGGTGAGAAGGGGCCATTTATCCCGTTTGCTGTC +
Preference number: 1 (lower is better)
Translates to: RLPFLAHSMCKPVWP*AELGEKGPFIPFAV
Trigger: GACAGCAAACGGGATAAATGGCCCCTTCTCACCCAGTTCCGCTCAGGGCCATACAGGCTTGCACATAGAGTGTGCTAAAAATGGTAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp TCCTTCCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTaGTTCCACAGGAAGCGGATACTTGGCAAATCTGCGAGGCGAGGC +
Preference number: 1 (lower is better)
Translates to: SFLFQTPTQLISFWS*FHRKRILGKSARRG
Trigger: GCCTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp CTGGAGTACTTCCTCTGTAGATCTTCACAGCCCTGGTCGTTTCCTTaGTGCATGACTGCAAAAGCATCCTTCCAGCACCTCTTCCTTCTC +
Preference number: 1 (lower is better)
Translates to: LEYFLCRSSQPWSFP*CMTAKASFQHLFLL
Trigger: GAGAAGGAAGAGGTGCTGGAAGGATGCTTTTGCAGTCATGCAGCAAGGAAACGACCAGGGCTGTGAAGATCTACAGAGGAAGTACTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 90 bp AGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAAGTaGACTTCCTCCTGCTCCTGTCCAGGGCAAATGTGGATAAGCAGG +
Preference number: 1 (lower is better)
Translates to: RNVFCVHMLCLPVQK*TSSCSCPGQMWISR
Trigger: CCTGCTTATCCACATTTGCCCTGGACAGGAGCAGGAGGAAGTCCACTTCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 90 bp ACTTCCTCTGTAGATCTTCACAGCCCTGGTCGTTTCCTTGCTGCATaGCTGCAAAAGCATCCTTCCAGCACCTCTTCCTTCTCTTCTGAA +
Preference number: 1 (lower is better)
Translates to: TSSVDLHSPGRFLAA*LQKHPSSTSSFSSE
Trigger: TTCAGAAGAGAAGGAAGAGGTGCTGGAAGGATGCTTTTGCAGTCATGCAGCAAGGAAACGACCAGGGCTGTGAAGATCTACAGAGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp GCTAAAGTTAGCGTGGGAGTTAAGACCGGAGTCCTCCTTCCCCTGTaGCCAAAACGTTACCCAGCTTTCCTTCCAAACGACAAATTCATT +
Preference number: 1 (lower is better)
Translates to: AKVSVGVKTGVLLPL*PKRYPAFLPNDKFI
Trigger: AATGAATTTGTCGTTTGGAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAACTCCCACGCTAACTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp GTTGACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTaGCGGTACAGAAGTGGACTTCCTCCTGCTCCTGTCCAGGGCAAA +
Preference number: 1 (lower is better)
Translates to: VDYAIEMCFVFTCSV*RYRSGLPPAPVQGK
Trigger: TTTGCCCTGGACAGGAGCAGGAGGAAGTCCACTTCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 90 bp AGTTGCTCCTTCCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTaGTCTTGCTTCCACAGGAAGCGGATACTTGGCAAATCTGCGAGG +
Preference number: 1 (lower is better)
Translates to: SCSFLFQTPTQLISF*SCFHRKRILGKSAR
Trigger: CCTCGCAGATTTGCCAAGTATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGGAAGGAGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 90 bp CTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATaGGCTGTCACACGACGTATGGCATCTTCTAAATTGCAACTTGCT +
Preference number: 1 (lower is better)
Translates to: LNPSVQTIASPVKGS*AVTRRMASSKLQLA
Trigger: AGCAAGTTGCAATTTAGAAGATGCCATACGTCGTGTGACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 90 bp AGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATaGAAACTGGCTACATCTTACCTTCCCAGAACCAACTTCCCTCAT +
Preference number: 1 (lower is better)
Translates to: RDLLSCTPSLSEVPR*KLATSYLPRTNFPH
Trigger: ATGAGGGAAGTTGGTTCTGGGAAGGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 90 bp CTCCCCTTTTCTGAAACAAGTCCTCTGGTGCTTAGAGCAACTGAATaGATGGGTGGAGCCTCAGTTCCTCTAGTATCTCCCTCTTCTTTC +
Preference number: 1 (lower is better)
Translates to: LPFSETSPLVLRATE*MGGASVPLVSPSSF
Trigger: GAAAGAAGAGGGAGATACTAGAGGAACTGAGGCTCCACCCATTCATTCAGTTGCTCTAAGCACCAGAGGACTTGTTTCAGAAAAGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp CGTGCTATCTTAGATTCTAAAATCTCAGAAGGCAAGGCTCATGTCTaGTGGGTTATTTGGTGCCAGAGACACCAGAAAGTCGGGAGCAGA +
Preference number: 1 (lower is better)
Translates to: RAILDSKISEGKAHV*WVIWCQRHQKVGSR
Trigger: TCTGCTCCCGACTTTCTGGTGTCTCTGGCACCAAATAACCCAGCAGACATGAGCCTTGCCTTCTGAGATTTTAGAATCTAAGATAGCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 90 bp GACAGACAGATAGATAACCCACTATGCTCCACAAAGGATATGGCGTaGCCAAACGGCTGCTTGAGATCTGCTCTAAACAATGACCTCAGT +
Preference number: 1 (lower is better)
Translates to: DRQIDNPLCSTKDMA*PNGCLRSALNNDLS
Trigger: ACTGAGGTCATTGTTTAGAGCAGATCTCAAGCAGCCGTTTGGCCACGCCATATCCTTTGTGGAGCATAGTGGGTTATCTATCTGTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 90 bp AACAAATCAACAGCAAAGTGGAAGAAAGGATCAGTTAGGACCTCTTaGAAGCCGCATTCTACAGGATCGGCCTTAGCGATCGGTGCTGAA +
Preference number: 1 (lower is better)
Translates to: NKSTAKWKKGSVRTS*KPHSTGSALAIGAE
Trigger: TTCAGCACCGATCGCTAAGGCCGATCCTGTAGAATGCGGCTTTCAAGAGGTCCTAACTGATCCTTTCTTCCACTTTGCTGTTGATTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp CTCACAGTCCGCATGCCAGGAAAGATCTGGCCGGCAAACACCCACTaGTTAAAAGTCATCTGCCACCCAAATCAAAACACTATGAAATTA +
Preference number: 1 (lower is better)
Translates to: LTVRMPGKIWPANTH*LKVICHPNQNTMKL
Trigger: TAATTTCATAGTGTTTTGATTTGGGTGGCAGATGACTTTTAAGCAGTGGGTGTTTGCCGGCCAGATCTTTCCTGGCATGCGGACTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp CTCCCTCTTCTTTCCCCACATTTGCAGGAGGAACAGTACAGCATATaGGACTTGAACTTGGCCCTGTACTATTCCCAACTTGTACACTTA +
Preference number: 1 (lower is better)
Translates to: LPLLSPHLQEEQYSI*DLNLALYYSQLVHL
Trigger: TAAGTGTACAAGTTGGGAATAGTACAGGGCCAAGTTCAAGTCGCATATGCTGTACTGTTCCTCCTGCAAATGTGGGGAAAGAAGAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 90 bp GCTATCTTAGATTCTAAAATCTCAGAAGGCAAGGCTCATGTCTGCTaGGTTATTTGGTGCCAGAGACACCAGAAAGTCGGGAGCAGAAAG +
Preference number: 1 (lower is better)
Translates to: AILDSKISEGKAHVC*VIWCQRHQKVGSRK
Trigger: CTTTCTGCTCCCGACTTTCTGGTGTCTCTGGCACCAAATAACCCAGCAGACATGAGCCTTGCCTTCTGAGATTTTAGAATCTAAGATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 90 bp GCAGGTTCATCGTACACGTACCAGTCTCAATCCCACAGAAACGCTTaGTTCCTTTCATCCCTATGCTGTCTATACAGTTTAATCTCTACC +
Preference number: 1 (lower is better)
Translates to: AGSSYTYQSQSHRNA*FLSSLCCLYSLIST
Trigger: GGTAGAGATTAAACTGTATAGACAGCATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTACGATGAACCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 90 bp GATTCTAAAATCTCAGAAGGCAAGGCTCATGTCTGCTGGGTTATTTaGTGCCAGAGACACCAGAAAGTCGGGAGCAGAAAGATGCTTAAT +
Preference number: 1 (lower is better)
Translates to: DSKISEGKAHVCWVI*CQRHQKVGSRKMLN
Trigger: ATTAAGCATCTTTCTGCTCCCGACTTTCTGGTGTCTCTGGCACCAAATAACCCAGCAGACATGAGCCTTGCCTTCTGAGATTTTAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp TCTAAAATCTCAGAAGGCAAGGCTCATGTCTGCTGGGTTATTTGGTaGCAGAGACACCAGAAAGTCGGGAGCAGAAAGATGCTTAATAAA +
Preference number: 1 (lower is better)
Translates to: SKISEGKAHVCWVIW*QRHQKVGSRKMLNK
Trigger: TTTATTAAGCATCTTTCTGCTCCCGACTTTCTGGTGTCTCTGGCACCAAATAACCCAGCAGACATGAGCCTTGCCTTCTGAGATTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 90 bp CAAGCCTACTGTCACACACACAAGCATGGACTTAGCAATGTACCATaGTGTTGCGATTTCCAAGTCATCTTCATAGTGGAGAAAGTAGTC +
Preference number: 1 (lower is better)
Translates to: QAYCHTHKHGLSNVP*CCDFQVIFIVEKVV
Trigger: GACTACTTTCTCCACTATGAAGATGACTTGGAAATCGCAACATCATGGTACATTGCTAAGTCCATGCTTGTGTGTGTGACAGTAGGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp GGGAGGGGCCGATTATTAAATCGTATACCCATACTGAGATTTCAGTaGCTGTTTGAGGACCAGCAAACCATGATTGTCAAGTTTAAGTTG +
Preference number: 1 (lower is better)
Translates to: GRGRLLNRIPILRFQ*LFEDQQTMIVKFKL
Trigger: CAACTTAAACTTGACAATCATGGTTTGCTGGTCCTCAAACAGGCACTGAAATCTCAGTATGGGTATACGATTTAATAATCGGCCCCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp CCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTaGATTTCCAAACATGCAACTTCTTCTGGGTGCCTAATTCATTTA +
Preference number: 1 (lower is better)
Translates to: PAFKVTSEVDVSPRY*ISKHATSSGCLIHL
Trigger: TAAATGAATTAGGCACCCAGAAGAAGTTGCATGTTTGGAAATGCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 90 bp TTTGAGGACCAGCAAACCATGATTGTCAAGTTTAAGTTGCAGTATTaGTGCCACAGTTGGCCTCAATTTGCTCTGCACATTTCGTACATT +
Preference number: 1 (lower is better)
Translates to: FEDQQTMIVKFKLQY*CHSWPQFALHISYI
Trigger: AATGTACGAAATGTGCAGAGCAAATTGAGGCCAACTGTGGCATCAATACTGCAACTTAAACTTGACAATCATGGTTTGCTGGTCCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp AAATTGCTTTTACGGTCAGCCCAATTTGAAACAGAACCCTCTTTCTaGAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTGC +
Preference number: 1 (lower is better)
Translates to: KLLLRSAQFETEPSF*NAQRRLPFLAHSMC
Trigger: GCACATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTCTGTTTCAAATTGGGCTGACCGTAAAAGCAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp GGGTTATTTGGTGCCAGAGACACCAGAAAGTCGGGAGCAGAAAGATaGTTAATAAATGCAATCGGAAAATTGGTGAAGGAAGTGAAATTA +
Preference number: 1 (lower is better)
Translates to: GLFGARDTRKSGAER*LINAIGKLVKEVKL
Trigger: TAATTTCACTTCCTTCACCAATTTTCCGATTGCATTTATTAAGCATCTTTCTGCTCCCGACTTTCTGGTGTCTCTGGCACCAAATAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 90 bp GGTAGTTTGAAAGACATCAAAATTGCTTTTACGGTCAGCCCAATTTaGAACAGAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATT +
Preference number: 1 (lower is better)
Translates to: GSLKDIKIAFTVSPI*NRTLFLQCSKEVTI
Trigger: AATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTCTGTTTCAAATTGGGCTGACCGTAAAAGCAATTTTGATGTCTTTCAAACTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 90 bp TCTAGTGTGAAAGGGATGAGAGAGACTTATATAACAACTAATTTGTaGATTACTGCCAATGCACTGCAAATCAGTGTCCGAATGACTGGC +
Preference number: 1 (lower is better)
Translates to: SSVKGMRETYITTNL*ITANALQISVRMTG
Trigger: GCCAGTCATTCGGACACTGATTTGCAGTGCATTGGCAGTAATTCACAAATTAGTTGTTATATAAGTCTCTCTCATCCCTTTCACACTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 90 bp GGTGATGGCTTTGTTTGGAGTCATCAGGCTCTACAACCTATCATTTaGTTTCTCACTAGTAGCTTTTTAAAATTCCCAAACAGTCTTAGT +
Preference number: 1 (lower is better)
Translates to: GDGFVWSHQALQPII*FLTSSFLKFPNSLS
Trigger: ACTAAGACTGTTTGGGAATTTTAAAAAGCTACTAGTGAGAAACCAAATGATAGGTTGTAGAGCCTGATGACTCCAAACAAAGCCATCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 90 bp CAGCACAATAAAATCAGAAATGAGAAGCAACTCTCTCCTTTCCCTTaGGGTCTCAAAGCTCTTTTACATTTCTTGATTCATTACAGAGAG +
Preference number: 1 (lower is better)
Translates to: QHNKIRNEKQLSPFP*GLKALLHFLIHYRE
Trigger: CTCTCTGTAATGAATCAAGAAATGTAAAAGAGCTTTGAGACCCCAAGGGAAAGGAGAGAGTTGCTTCTCATTTCTGATTTTATTGTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 90 bp ACAGGGAATGTGACTGGTAGGGATGTATGTATAACAATTTCGTGGTaGTGGGAATTATTAAATAACTTCTGCTTACAGAAGATTTCTCAT +
Preference number: 1 (lower is better)
Translates to: TGNVTGRDVCITISW*WELLNNFCLQKISH
Trigger: ATGAGAAATCTTCTGTAAGCAGAAGTTATTTAATAATTCCCAGCACCACGAAATTGTTATACATACATCCCTACCAGTCACATTCCCTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 90 bp AACACAGGGAATGTGACTGGTAGGGATGTATGTATAACAATTTCGTaGTGCTGGGAATTATTAAATAACTTCTGCTTACAGAAGATTTCT +
Preference number: 1 (lower is better)
Translates to: NTGNVTGRDVCITIS*CWELLNNFCLQKIS
Trigger: AGAAATCTTCTGTAAGCAGAAGTTATTTAATAATTCCCAGCACCACGAAATTGTTATACATACATCCCTACCAGTCACATTCCCTGTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTCTGAGCGGAACTGGGTaGGAAGGGGCCATTTATCCC +
Preference number: 2 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPLSGTG*EGAIYP
Trigger: GGGATAAATGGCCCCTTCTCACCCAGTTCCGCTCAG...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGCTCTTGATCTCAAGTaGTCCACCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPALDLK*STCLSL
Trigger: GAGGCTGAGGCAGGTGGATCACTTGAGATCAAGAGC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCAAGAGGAATAGGCCATaGCACACAGCCCAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: HQQRAGDPGACSHHTITTKRNRP*HTAQVC
Trigger: ACACACCTGGGCTGTGTGGCATGGCCTATTCCTCTT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGGGCATTCTCTCCAATaGTCCTTGGAGCCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPGHSLQ*SLEPLR
Trigger: CCTCAGAGGCTCCAAGGAGCATTGGAGAGAATGCCC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGGTGATCCGGGGGCCTaGTCACACCACACCATAACC +
Preference number: 2 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLGDPGA*SHHTIT
Trigger: GGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 90 bp GCTGGCTTTAGCCCAAAGCCTTTAGCGCCTACCTTCACCCGTGCTTaGCCTCACAGTCCGCATGCCAGGAAAGATCTGGCCGGCAAACAC +
Preference number: 2 (lower is better)
Translates to: AGFSPKPLAPTFTRA*PHSPHARKDLAGKH
Trigger: GTGTTTGCCGGCCAGATCTTTCCTGGCATGCGGACTGTGAGGCAAAGCACGGGTGAAGGTAGGCGCTAAAGGCTTTGGGCTAAAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGCTGAGCGGAACTGGGTaGGAAGGGGCCATTTATCCC +
Preference number: 2 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKLSGTG*EGAIYP
Trigger: GGGATAAATGGCCCCTTCTCACCCAGTTCCGCTCAG...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGCCTACCTTCACCCGTaGTTTGCCTCACAGTCCGCA +
Preference number: 2 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKAYLHP*FASQSA
Trigger: TGCGGACTGTGAGGCAAAGCACGGGTGAAGGTAGGC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCTTTGTTGAACGTCCTTaGGAGACTTACTCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: HQQRAGDPGACSHHTITTFVERP*ETYSPA
Trigger: TGCAGGAGAGTAAGTCTCTCAAGGACGTTCAACAAA...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCAGAGACTTACTCTCCTaGACTCCTTCTCTTTCAGAG +
Preference number: 2 (lower is better)
Translates to: HQQRAGDPGACSHHTITTRDLLS*TPSLSE
Trigger: CTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGGTGATCCGGGGGCCTaGTCACACCACACCATAACC +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFGDPGA*SHHTIT
Trigger: GGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGATGCCAGGAAAGATCTaGCCGGCAAACACCCACTGC +
Preference number: 2 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKMPGKI*PANTHC
Trigger: GCAGTGGGTGTTTGCCGGCCAGATCTTTCCTGGCAT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCACAGAGAGGCTGAACTaGACTCAATTTCATTTCCAG +
Preference number: 2 (lower is better)
Translates to: HQQRAGDPGACSHHTITTTERLN*TQFHFQ
Trigger: CTGGAAATGAAATTGAGTTCAGTTCAGCCTCTCTGT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGAAGGTGAAGGGCCCTTaGAGCTGTAGCACCAGAAGA +
Preference number: 2 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKKVKGP*SCSTRR
Trigger: TCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTTGCCCAGATGAAAACTaGCTACATCTTACCTTCCCA +
Preference number: 2 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPCPDEN*LHLTFP
Trigger: TGGGAAGGTAAGATGTAGCCAGTTTTCATCTGGGCA...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 90 bp TCACACGACGTATGGCATCTTCTAAATTGCAACTTGCTCCCTCCCTaGGGCAGGCTGCCCGAGAGTTGCTCCTTCCTCTTCCAAACACCC +
Preference number: 2 (lower is better)
Translates to: SHDVWHLLNCNLLPP*GRLPESCSFLFQTP
Trigger: GGGTGTTTGGAAGAGGAAGGAGCAACTCTCGGGCAGCCTGCCCAAGGGAGGGAGCAAGTTGCAATTTAGAAGATGCCATACGTCGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 90 bp CACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGTTaGGCTTATGGGGAGAATGAAGTTCAGAGAAGGAACCAGACATGG +
Preference number: 2 (lower is better)
Translates to: HNYGAWEVAGEVCSC*AYGENEVQRRNQTW
Trigger: CCATGTCTGGTTCCTTCTCTGAACTTCATTCTCCCCATAAGCCAAACAAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGCTCCCTTGGGCAGGCTaGCCGAGAGTTGCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKLPWAG*PRVAPS
Trigger: GGAAGGAGCAACTCTCGGGCAGCCTGCCCAAGGGAG...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGTAGAGACGGGGTTTTaGCATGTTGCCTGGGCTGGT +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFVETGF*HVAWAG
Trigger: ACCAGCCCAGGCAACATGGCAAAACCCCGTCTCTAC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCAGGAAGCGGATACTTaGCAAATCTGCGAGGCGAGG +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFQEADT*QICEAR
Trigger: CCTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGAAGCCTGTATGGCCCTaGGCGGAACTGGGTGAGAAG +
Preference number: 2 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMKPVWP*AELGEK
Trigger: CTTCTCACCCAGTTCCGCTCAGGGCCATACAGGCTT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTACGGTCAGCCCAATTTaGAACAGAACCCTCTTTCTG +
Preference number: 2 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLTVSPI*NRTLFL
Trigger: CAGAAAGAGGGTTCTGTTTCAAATTGGGCTGACCGT...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGTGAGCCACCGCGCCTaGTCTCTTCGAATGAATTTT +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFVSHRA*SLRMNF
Trigger: AAAATTCATTCGAAGAGATCAGGCGCGGTGGCTCAC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGAGTCACTTCAGAAGTTaGCGTCTCCCCAAGATATTG +
Preference number: 2 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKSHFRS*RLPKIL
Trigger: CAATATCTTGGGGAGACGTCAACTTCTGAAGTGACT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCGTTTCCTTGCTGCATaGCTGCAAAAGCATCCTTCC +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFRFLAA*LQKHPS
Trigger: GGAAGGATGCTTTTGCAGTCATGCAGCAAGGAAACG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCGGGCATTCTCTCCAATaGTCCTTGGAGCCTCTGAGG +
Preference number: 2 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTGHSLQ*SLEPLR
Trigger: CCTCAGAGGCTCCAAGGAGCATTGGAGAGAATGCCC...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCAGGAAGCGGATACTTaGCAAATCTGCGAGGCGAGG +
Preference number: 2 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAQEADT*QICEAR
Trigger: CCTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTG...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCTGGCAAAACTGTTGTaGCAGGCGTCGAGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMLAKLL*QASRGS
Trigger: GCTTCCTCTCGACGCCTGCCACAACAGTTTTGCCAG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTTATCGTGCCTCAGCTaGGACTACAGGCATGCGCCA +
Preference number: 2 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCLSCLS*DYRHAP
Trigger: TGGCGCATGCCTGTAGTCCCAGCTGAGGCACGATAA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCAGTGTCCGAATGACTaGCTTGGTCACTGGAACACT +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFQCPND*LGHWNT
Trigger: AGTGTTCCAGTGACCAAGCCAGTCATTCGGACACTG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 90 bp CTCCTTCCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTaGCTTCCACAGGAAGCGGATACTTGGCAAATCTGCGAGGCGAGG +
Preference number: 2 (lower is better)
Translates to: LLPLPNTHSVDFLLV*LPQEADTWQICEAR
Trigger: CCTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGGAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCCAGTGAAAGGCTCATaGGCTGTCACACGACGTATG +
Preference number: 2 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMPVKGS*AVTRRM
Trigger: CATACGTCGTGTGACAGCTCATGAGCCTTTCACTGG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCAATTGCCAGCCCAGTaGAAGGCTCATGAGCTGTCA +
Preference number: 2 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAQLPAQ*KAHELS
Trigger: TGACAGCTCATGAGCCTTTCACTGGGCTGGCAATTG...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTTTCCTTTCATCCCTATaGTGTCTATACAGTTTAATC +
Preference number: 2 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPFLSSL*CLYSLI
Trigger: GATTAAACTGTATAGACAGCATAGGGATGAAAGGAA...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGACCCTCTTTCTGCAATaGTCAAAGGAGGTTACCATT +
Preference number: 2 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKTLFLQ*SKEVTI
Trigger: AATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTGGTCGTTTCCTTGCTaGATGACTGCAAAAGCATCC +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFWSFPC*MTAKAS
Trigger: GGATGCTTTTGCAGTCATGCAGCAAGGAAACGACCA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGCAGTTGATTTCCTTTTaGTCTTGCTTCCACAGGAAG +
Preference number: 2 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKQLISF*SCFHRK
Trigger: CTTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTG...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGAAGGTGAAGGGCCCTTaGAGCTGTAGCACCAGAAGA +
Preference number: 2 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMKVKGP*SCSTRR
Trigger: TCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCCGATCGGTGCTGAACTaGGACATGACCAGGAGTTGT +
Preference number: 2 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTRSVLN*DMTRSC
Trigger: ACAACTCCTGGTCATGTCCCAGTTCAGCACCGATCG...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCGAGGAAGAATGCGGGTaGTGGCTTTGTTTGGAGTCA +
Preference number: 2 (lower is better)
Translates to: PALLLFQRCPDENWLHLTEEECG*WLCLES
Trigger: TGACTCCAAACAAAGCCATCACCCGCATTCTTCCTC...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCAGATACACAGGTTTTaGTCAGTCAGAGCCCCAAAT +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFQIHRF*SVRAPN
Trigger: ATTTGGGGCTCTGACTGATCAAAACCTGTGTATCTG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAAAGCCTGTATGGCCCTaGGCGGAACTGGGTGAGAAG +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRKPVWP*AELGEK
Trigger: CTTCTCACCCAGTTCCGCTCAGGGCCATACAGGCTT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTCAAGTTCATTTCAGTaGCAGCTTCACTCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFSSSFQ*QLHSFP
Trigger: AGGGAAGGAGTGAAGCTGTCACTGAAATGAACTTGA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGAAACAGAACAGCCCTTaGCACTGTTTTCTTTACCAT +
Preference number: 2 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKKQNSP*HCFLYH
Trigger: ATGGTAAAGAAAACAGTGGCAAGGGCTGTTCTGTTT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGGCCCTGAGCGGAACTaGGTGAGAAGGGGCCATTTA +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRGPERN*VRRGHL
Trigger: TAAATGGCCCCTTCTCACCCAGTTCCGCTCAGGGCC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATCCACGCCATTTGCCTaGGTAGCTGCCCTGCCTTCA +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRSTPFA*VAALPS
Trigger: TGAAGGCAGGGCAGCTACCCAGGCAAATGGCGTGGA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 90 bp GAGTTGCTCCTTCCTCTTCCAAACACCCACTCAGTTGATTTCCTTTaGGTCTTGCTTCCACAGGAAGCGGATACTTGGCAAATCTGCGAG +
Preference number: 2 (lower is better)
Translates to: ELLLPLPNTHSVDFL*VLLPQEADTWQICE
Trigger: CTCGCAGATTTGCCAAGTATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGGAAGGAGCAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCACCAGGAGTTGTGTGTaGCCAATTAAGAAACAGCAA +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFTRSCV*PIKKQQ
Trigger: TTGCTGTTTCTTAATTGGGCACACACAACTCCTGGT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACCGCCTGATAAGATGCTaGTGGTCCTTTGTTGAACGT +
Preference number: 2 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDRLIRC*WSFVER
Trigger: ACGTTCAACAAAGGACCAGCAGCATCTTATCAGGCG...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTTGCATTTCCAAACATaGAACTTCTTCTGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFLHFQT*NFFWVP
Trigger: AGGCACCCAGAAGAAGTTGCATGTTTGGAAATGCAA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCTGGCGCTGGCACCTTaGTCCGGAGGTAGAAATGAC +
Preference number: 2 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPLALAP*SGGRND
Trigger: GTCATTTCTACCTCCGGAGCAAGGTGCCAGCGCCAG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGTCCCACAGAAACGCTTaGTTCCTTTCATCCCTATGC +
Preference number: 2 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMSHRNA*FLSSLC
Trigger: GCATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGA...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTCCCACAGAAACGCTTaGTTCCTTTCATCCCTATGC +
Preference number: 2 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTSHRNA*FLSSLC
Trigger: GCATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCGTCTGCTGGGTTATTTaGTGCCAGAGACACCAGAAA +
Preference number: 2 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCVCWVI*CQRHQK
Trigger: TTTCTGGTGTCTCTGGCACCAAATAACCCAGCAGAC...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGTCAGTTAGGACCTCTTaGAAGCCGCATTCTACAGGA +
Preference number: 2 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKSVRTS*KPHSTG
Trigger: TCCTGTAGAATGCGGCTTTCAAGAGGTCCTAACTGA...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGTCAGAGGTGCCCAGATaGAAACTGGCTACATCTTAC +
Preference number: 2 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKSEVPR*KLATSY
Trigger: GTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGA...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCATCTGCTCTAAACAATaGCCTCAGTGTCATTCTCAT +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFICSKQ*PQCHSH
Trigger: ATGAGAATGACACTGAGGTCATTGTTTAGAGCAGAT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCCCCATCATTAAGCGATaGATGACTGTCTTCGCTGAT +
Preference number: 2 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCPIIKR*MTVFAD
Trigger: ATCAGCGAAGACAGTCATGCATCGCTTAATGATGGG...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACCCCATCATTAAGCGATaGATGACTGTCTTCGCTGAT +
Preference number: 2 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDPIIKR*MTVFAD
Trigger: ATCAGCGAAGACAGTCATGCATCGCTTAATGATGGG...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCCTTCTCTTTCAGAGGTaGCCAGATGAAAACTGGCTA +
Preference number: 2 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTLLFQR*PDENWL
Trigger: TAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAG...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTTTGTGAAGTGCTGCTaGCTTTTGGCCAAAATACAT +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFFVKCC*LLAKIH
Trigger: ATGTATTTTGGCCAAAAGCCAGCAGCACTTCACAAA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGGGTGATGGCTTTGTTTaGAGTCATCAGGCTCTACAA +
Preference number: 2 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMGDGFV*SHQALQ
Trigger: TTGTAGAGCCTGATGACTCCAAACAAAGCCATCACC...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGTCTGCTGGGTTATTTaGTGCCAGAGACACCAGAAA +
Preference number: 2 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKVCWVI*CQRHQK
Trigger: TTTCTGGTGTCTCTGGCACCAAATAACCCAGCAGAC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTTTTGCCATGTTGCCTaGGCTGGTTTTAAGCTCTTG +
Preference number: 2 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCFCHVA*AGFKLL
Trigger: CAAGAGCTTAAAACCAGCCCAGGCAACATGGCAAAA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 90 bp CCATTTGCCTGGGTAGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTaGACGTCTCCCCAAGATATTGCATTTCCAAACATGCAACTTCTT +
Preference number: 2 (lower is better)
Translates to: PFAWVAALPSKSLQK*TSPQDIAFPNMQLL
Trigger: AAGAAGTTGCATGTTTGGAAATGCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCTACCCAGGCAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 90 bp CTTCTTTCCCCACATTTGCAGGAGGAACAGTACAGCATATGCGACTaGAACTTGGCCCTGTACTATTCCCAACTTGTACACTTAGGGAGT +
Preference number: 2 (lower is better)
Translates to: LLSPHLQEEQYSICD*NLALYYSQLVHLGS
Trigger: ACTCCCTAAGTGTACAAGTTGGGAATAGTACAGGGCCAAGTTCAAGTCGCATATGCTGTACTGTTCCTCCTGCAAATGTGGGGAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCAAACACCCACTCAGTTaGTTTCCTTTTGGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCKHPLS*FPFGLA
Trigger: AGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTT...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCAAACACCCACTCAGTTaGTTTCCTTTTGGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAKHPLS*FPFGLA
Trigger: AGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTT...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGTGCTGTCACACGATTTaGATTCATTACAAGGTGTCC +
Preference number: 2 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMCCHTI*IHYKVS
Trigger: GGACACCTTGTAATGAATTCAAATCGTGTGACAGCA...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTGCTGTCACACGATTTaGATTCATTACAAGGTGTCC +
Preference number: 2 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTCCHTI*IHYKVS
Trigger: GGACACCTTGTAATGAATTCAAATCGTGTGACAGCA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGACGTGAACTTAATGTCTaGAGACCGCTAGGGTACGGT +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRRELNV*RPLGYG
Trigger: ACCGTACCCTAGCGGTCTTCAGACATTAAGTTCACG...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGACCAGGAGTTGTGTGTaGCCAATTAAGAAACAGCAA +
Preference number: 2 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMTRSCV*PIKKQQ
Trigger: TTGCTGTTTCTTAATTGGGCACACACAACTCCTGGT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCACAGAACCCTCTTTCTaGAATGCTCAAAGGAGGTTA +
Preference number: 2 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTTEPSF*NAQRRL
Trigger: TAACCTCCTTTGAGCATTGCAGAAAGAGGGTTCTGT...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCAGTTGATTTCCTTTTaGTCTTGCTTCCACAGGAAG +
Preference number: 2 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAQLISF*SCFHRK
Trigger: CTTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTG...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATTGCCTCCCCCACACTaGAGTACTTCCTCTGTAGAT +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRLPPPH*STSSVD
Trigger: ATCTACAGAGGAAGTACTCCAGTGTGGGGGAGGCAA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 90 bp TATGGCCCTGAGCGGAACTGGGTGAGAAGGGGCCATTTATCCCGTTaGCTGTCACACGATTTGAATTCATTACAAGGTGTCCATAATAAA +
Preference number: 2 (lower is better)
Translates to: YGPERNWVRRGHLSR*LSHDLNSLQGVHNK
Trigger: TTTATTATGGACACCTTGTAATGAATTCAAATCGTGTGACAGCAAACGGGATAAATGGCCCCTTCTCACCCAGTTCCGCTCAGGGCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCCAGTGAAAGGCTCATaGGCTGTCACACGACGTATG +
Preference number: 2 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHPVKGS*AVTRRM
Trigger: CATACGTCGTGTGACAGCTCATGAGCCTTTCACTGG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCAGGGGTCTTAAAACTTaGCACAGATACACAGGTTTT +
Preference number: 2 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCRGLKT*HRYTGF
Trigger: AAAACCTGTGTATCTGTGTCAAGTTTTAAGACCCCT...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGACTGCTGGTCCTTTGTTaGACGTCCTTGAGAGACTTA +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRLLVLC*TSLRDL
Trigger: TAAGTCTCTCAAGGACGTTCAACAAAGGACCAGCAG...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGGCTTATGGGGAGAATaGAGTTCAGAGAAGGAACCA +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRGLWGE*SSEKEP
Trigger: TGGTTCCTTCTCTGAACTTCATTCTCCCCATAAGCC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAAAGTGTTCAGACAATTaGCAGCCCAGTGAAAGGCTC +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRKCSDN*QPSERL
Trigger: GAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATCCTTGCTGCATGACTaGAAAAGCATCCTTCCAGCA +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRSLLHD*KSILPA
Trigger: TGCTGGAAGGATGCTTTTGCAGTCATGCAGCAAGGA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCCGGCAAACACCCACTaGTTAAAAGTCATCTGCCAC +
Preference number: 2 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPPANTH*LKVICH
Trigger: GTGGCAGATGACTTTTAAGCAGTGGGTGTTTGCCGG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCTACAACCTATCATTTaGTTTCTCACTAGTAGCTTT +
Preference number: 2 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFLQPII*FLTSSF
Trigger: AAAGCTACTAGTGAGAAACCAAATGATAGGTTGTAG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 90 bp AGCAGGTTCATCGTACACGTACCAGTCTCAATCCCACAGAAACGCTaGGTTCCTTTCATCCCTATGCTGTCTATACAGTTTAATCTCTAC +
Preference number: 2 (lower is better)
Translates to: SRFIVHVPVSIPQKR*VPFIPMLSIQFNLY
Trigger: GTAGAGATTAAACTGTATAGACAGCATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTACGATGAACCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCCATGACTGTCTTCGCTaGTCTAATAAAAACAGGTTA +
Preference number: 2 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTHDCLR*SNKNRL
Trigger: TAACCTGTTTTTATTAGATCAGCGAAGACAGTCATG...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGGACATCTGCACACATaGTCACATCTGATTCTCACA +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRGHLHT*SHLILT
Trigger: TGTGAGAATCAGATGTGATCATGTGTGCAGATGTCC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTGGTGAAAACTCCACTTaGGCTAAAGTTAGCGTGGGA +
Preference number: 2 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPGENST*AKVSVG
Trigger: TCCCACGCTAACTTTAGCTCAAGTGGAGTTTTCACC...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAAGAGACTTACTCTCCTaGACTCCTTCTCTTTCAGAG +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRRDLLS*TPSLSE
Trigger: CTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCGAAAGACATCAAAATTaGTTTTACGGTCAGCCCAAT +
Preference number: 2 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTERHQN*FYGQPN
Trigger: ATTGGGCTGACCGTAAAAGCAATTTTGATGTCTTTC...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGGAAAGACATCAAAATTaGTTTTACGGTCAGCCCAAT +
Preference number: 2 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMERHQN*FYGQPN
Trigger: ATTGGGCTGACCGTAAAAGCAATTTTGATGTCTTTC...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCCCTGGTCGTTTCCTTaGTGCATGACTGCAAAAGCA +
Preference number: 2 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHPWSFP*CMTAKA
Trigger: TGCTTTTGCAGTCATGCAGCAAGGAAACGACCAGGG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTTTCACATGCTCTGTCTaGCGGTACAGAAGTGGACTT +
Preference number: 2 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPFTCSV*RYRSGL
Trigger: AAGTCCACTTCTGTACCGGCAGACAGAGCATGTGAA...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGTTTGTGAAGTGCTGCTaGCTTTTGGCCAAAATACAT +
Preference number: 2 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMFVKCC*LLAKIH
Trigger: ATGTATTTTGGCCAAAAGCCAGCAGCACTTCACAAA...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTTTGTTGAACGTCCTTaGGAGACTTACTCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMFVERP*ETYSPA
Trigger: TGCAGGAGAGTAAGTCTCTCAAGGACGTTCAACAAA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAATTTCCTTTTGGTCTTaGTTCCACAGGAAGCGGATA +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRISFWS*FHRKRI
Trigger: TATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAAT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAAGTACAAACTGTGTGTaGTTTATGACCACCAGCAGA +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRSTNCV*FMTTSR
Trigger: TCTGCTGGTGGTCATAAAGCACACACAGTTTGTACT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATTCCTTGCTGCATGACTaGAAAAGCATCCTTCCAGCA +
Preference number: 2 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHSLLHD*KSILPA
Trigger: TGCTGGAAGGATGCTTTTGCAGTCATGCAGCAAGGA...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATTGGTCGTTTCCTTGCTaGATGACTGCAAAAGCATCC +
Preference number: 2 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHWSFPC*MTAKAS
Trigger: GGATGCTTTTGCAGTCATGCAGCAAGGAAACGACCA...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCAGATACACAGGTTTTaGTCAGTCAGAGCCCCAAAT +
Preference number: 2 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHQIHRF*SVRAPN
Trigger: ATTTGGGGCTCTGACTGATCAAAACCTGTGTATCTG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCTCTTCCTTCTCTTCTaGAACTCCCTCAATAGTGCA +
Preference number: 2 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHLFLLF*NSLNSA
Trigger: TGCACTATTGAGGGAGTTTCAGAAGAGAAGGAAGAG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATACAGCATATGCGACTTaGACTTGGCCCTGTACTATT +
Preference number: 2 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHTAYAT*TWPCTI
Trigger: AATAGTACAGGGCCAAGTTCAAGTCGCATATGCTGT...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATTTGTTTTTGTGAAGTaGTGCTGGCTTTTGGCCAAA +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRFVFVK*CWLLAK
Trigger: TTTGGCCAAAAGCCAGCAGCACTTCACAAAAACAAA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATGATCGCCTGATAAGATaGTGCTGGTCCTTTGTTGAA +
Preference number: 2 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHDRLIR*CWSFVE
Trigger: TTCAACAAAGGACCAGCAGCATCTTATCAGGCGATC...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTACAGAACCCTCTTTCTaGAATGCTCAAAGGAGGTTA +
Preference number: 2 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPTEPSF*NAQRRL
Trigger: TAACCTCCTTTGAGCATTGCAGAAAGAGGGTTCTGT...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTAGTACAAACTGTGTGTaGTTTATGACCACCAGCAGA +
Preference number: 2 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPSTNCV*FMTTSR
Trigger: TCTGCTGGTGGTCATAAAGCACACACAGTTTGTACT...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATGGTGATGGCTTTGTTTaGAGTCATCAGGCTCTACAA +
Preference number: 2 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHGDGFV*SHQALQ
Trigger: TTGTAGAGCCTGATGACTCCAAACAAAGCCATCACC...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGATAATCGTTCAATTTaGGAGGAGTCGGGTATTAAA +
Preference number: 2 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRDNRSI*EESGIK
Trigger: TTTAATACCCGACTCCTCCCAAATTGAACGATTATC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 90 bp CAACTCTCTCCTTTCCCTTGGGGTCTCAAAGCTCTTTTACATTTCTaGATTCATTACAGAGAGGCTGAACTGAACTCAATTTCATTTCCA +
Preference number: 2 (lower is better)
Translates to: QLSPFPWGLKALLHF*IHYREAELNSISFP
Trigger: TGGAAATGAAATTGAGTTCAGTTCAGCCTCTCTGTAATGAATCAAGAAATGTAAAAGAGCTTTGAGACCCCAAGGGAAAGGAGAGAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 90 bp AACTGGGTGAGAAGGGGCCATTTATCCCGTTTGCTGTCACACGATTaGAATTCATTACAAGGTGTCCATAATAAAATTCTGCTTGGATAT +
Preference number: 2 (lower is better)
Translates to: NWVRRGHLSRLLSHD*NSLQGVHNKILLGY
Trigger: ATATCCAAGCAGAATTTTATTATGGACACCTTGTAATGAATTCAAATCGTGTGACAGCAAACGGGATAAATGGCCCCTTCTCACCCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTCATTACAGAGAGGCTaGACTGAACTCAATTTCATT +
Preference number: 2 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMSLQRG*TELNFI
Trigger: AATGAAATTGAGTTCAGTTCAGCCTCTCTGTAATGA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTACATGCAACTTCTTCTaGGTGCCTAATTCATTTATG +
Preference number: 2 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPTCNFF*VPNSFM
Trigger: CATAAATGAATTAGGCACCCAGAAGAAGTTGCATGT...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR TCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCATGACTGTCTTCGCTaGTCTAATAAAAACAGGTTA +
Preference number: 2 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHHDCLR*SNKNRL
Trigger: TAACCTGTTTTTATTAGATCAGCGAAGACAGTCATG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGCTACAACCTATCATTTaGTTTCTCACTAGTAGCTTT +
Preference number: 2 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMLQPII*FLTSSF
Trigger: AAAGCTACTAGTGAGAAACCAAATGATAGGTTGTAG...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 90 bp AGAAAGTCGGGAGCAGAAAGATGCTTAATAAATGCAATCGGAAAATaGGTGAAGGAAGTGAAATTAAAGCAAAATGGGAGTGAGGAAACT +
Preference number: 2 (lower is better)
Translates to: RKSGAERCLINAIGK*VKEVKLKQNGSEET
Trigger: AGTTTCCTCACTCCCATTTTGCTTTAATTTCACTTCCTTCACCAATTTTCCGATTGCATTTATTAAGCATCTTTCTGCTCCCGACTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAATTTCCTTTTGGTCTTaGTTCCACAGGAAGCGGATA +
Preference number: 2 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEISFWS*FHRKRI
Trigger: TATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAAT...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATTTCCTTTCATCCCTATaGTGTCTATACAGTTTAATC +
Preference number: 2 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHFLSSL*CLYSLI
Trigger: GATTAAACTGTATAGACAGCATAGGGATGAAAGGAA...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAACTGTCACACGACGTATaGCATCTTCTAAATTGCAAC +
Preference number: 2 (lower is better)
Translates to: NLQHILPLKKPKFHFRHELSHDV*HLLNCN
Trigger: GTTGCAATTTAGAAGATGCCATACGTCGTGTGACAG...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp CTATTAACGCTAGCCAGACTCCCTGCGTCCCAGAGATaGTCCGGAGGAGGGCAAAGTCGAGGGCGTTCCCAC +
Preference number: 3 (lower is better)
Translates to: LLTLARLPASQR*SGGGQSRGRSH
Trigger: GTGGGAACGCCCTCGACTTTGCCCTCCTCCGGAGCATCTCTGGGACGCAGGGAGTCTGGCTAGCGTTAATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGACCTTCACCCGTGCTTaGCCTCACAGTCCGCATGCC +
Preference number: 3 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKTFTRA*PHSPHA
Trigger: GGCATGCGGACTGTGAGGCAAAGCACGGGTGAAGGT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp CCCTCCTCACAGGACATCTGCACACATGATCACATCTaGTTCTCACAACTACGGTGCCTGGGAGGTGGCGGG +
Preference number: 3 (lower is better)
Translates to: PSSQDICTHDHI*FSQLRCLGGGG
Trigger: CCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATGTGATCATGTGTGCAGATGTCCTGTGAGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp GGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTaGTTTATGACCACCAGCAGAGGGCTGGTGATCCGG +
Preference number: 3 (lower is better)
Translates to: GRRREEASTNCV*FMTTSRGLVIR
Trigger: CCGGATCACCAGCCCTCTGCTGGTGGTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp GGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTaGGTAGCTGCCCTGCCTTCAAAGTCACTTCAGAAG +
Preference number: 3 (lower is better)
Translates to: GPLSALPSTPFA*VAALPSKSLQK
Trigger: CTTCTGAAGTGACTTTGAAGGCAGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGCTGGTTTTAAGCTCTaGATCTCAAGTGATCCACCT +
Preference number: 3 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPAGFKL*ISSDPP
Trigger: AGGTGGATCACTTGAGATCAAGAGCTTAAAACCAGC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp TATGTGCAAGCCTGTATGGCCCTGAGCGGAACTGGGTaGGAAGGGGCCATTTATCCCGTTTGCTGTCACACG +
Preference number: 3 (lower is better)
Translates to: YVQACMALSGTG*EGAIYPVCCHT
Trigger: CGTGTGACAGCAAACGGGATAAATGGCCCCTTCTCACCCAGTTCCGCTCAGGGCCATACAGGCTTGCACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp CATGAGCTGTCACACGACGTATGGCATCTTCTAAATTaGAACTTGCTCCCTCCCTTGGGCAGGCTGCCCGAG +
Preference number: 3 (lower is better)
Translates to: HELSHDVWHLLN*NLLPPLGRLPE
Trigger: CTCGGGCAGCCTGCCCAAGGGAGGGAGCAAGTTGCAATTTAGAAGATGCCATACGTCGTGTGACAGCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp AGCGTGGGAGTTAAGACCGGAGTCCTCCTTCCCCTGTaGCCAAAACGTTACCCAGCTTTCCTTCCAAACGAC +
Preference number: 3 (lower is better)
Translates to: SVGVKTGVLLPL*PKRYPAFLPND
Trigger: GTCGTTTGGAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAACTCCCACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp GTGGATAAGCAGGCTCTAGTACTGGCGCTGGCACCTTaGTCCGGAGGTAGAAATGACCACGGTGAAAACTCC +
Preference number: 3 (lower is better)
Translates to: VDKQALVLALAP*SGGRNDHGENS
Trigger: GGAGTTTTCACCGTGGTCATTTCTACCTCCGGAGCAAGGTGCCAGCGCCAGTACTAGAGCCTGCTTATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp ATGCTCTGTCTGCCGGTACAGAAGTGGACTTCCTCCTaGTCCTGTCCAGGGCAAATGTGGATAAGCAGGCTC +
Preference number: 3 (lower is better)
Translates to: MLCLPVQKWTSS*SCPGQMWISRL
Trigger: GAGCCTGCTTATCCACATTTGCCCTGGACAGGAGCAGGAGGAAGTCCACTTCTGTACCGGCAGACAGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp GTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGTTTaGCTTATGGGGAGAATGAAGTTCAGAGAAGGAACC +
Preference number: 3 (lower is better)
Translates to: VPGRWRGRSVLV*LMGRMKFREGT
Trigger: GGTTCCTTCTCTGAACTTCATTCTCCCCATAAGCCAAACAAGAACAGACCTCCCCCGCCACCTCCCAGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp TCACATCTGATTCTCACAACTACGGTGCCTGGGAGGTaGCGGGGGAGGTCTGTTCTTGTTTGGCTTATGGGG +
Preference number: 3 (lower is better)
Translates to: SHLILTTTVPGR*RGRSVLVWLMG
Trigger: CCCCATAAGCCAAACAAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGCTGCTGGTCCTTTGTaGAACGTCCTTGAGAGACTT +
Preference number: 3 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLAAGPL*NVLERL
Trigger: AAGTCTCTCAAGGACGTTCAACAAAGGACCAGCAGC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp CTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTaGCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTC +
Preference number: 3 (lower is better)
Translates to: LSSSFHAICLGS*PAFKVTSEVDV
Trigger: GACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp AGGAGGGAGAGACAAGTCAGTACTCCAGGGCAGCTCTaGCGAGCAACCTTTCCTATTAACGCTAGCCAGACT +
Preference number: 3 (lower is better)
Translates to: RRERQVSTPGQL*RATFPINASQT
Trigger: AGTCTGGCTAGCGTTAATAGGAAAGGTTGCTCGGCAGAGCTGCCCTGGAGTACTGACTTGTCTCTCCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp ACTCTATGTGCAAGCCTGTATGGCCCTGAGCGGAACTaGGTGAGAAGGGGCCATTTATCCCGTTTGCTGTCA +
Preference number: 3 (lower is better)
Translates to: TLCASLYGPERN*VRRGHLSRLLS
Trigger: TGACAGCAAACGGGATAAATGGCCCCTTCTCACCCAGTTCCGCTCAGGGCCATACAGGCTTGCACATAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp CACATGATCACATCTGATTCTCACAACTACGGTGCCTaGGAGGTGGCGGGGGAGGTCTGTTCTTGTTTGGCT +
Preference number: 3 (lower is better)
Translates to: HMITSDSHNYGA*EVAGEVCSCLA
Trigger: AGCCAAACAAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATGTGATCATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp GTGCTTTGCCTCACAGTCCGCATGCCAGGAAAGATCTaGCCGGCAAACACCCACTGCTTAAAAGTCATCTGC +
Preference number: 3 (lower is better)
Translates to: VLCLTVRMPGKI*PANTHCLKVIC
Trigger: GCAGATGACTTTTAAGCAGTGGGTGTTTGCCGGCCAGATCTTTCCTGGCATGCGGACTGTGAGGCAAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp ACCACGGTGAAAACTCCACTTGAGCTAAAGTTAGCGTaGGAGTTAAGACCGGAGTCCTCCTTCCCCTGTGCC +
Preference number: 3 (lower is better)
Translates to: TTVKTPLELKLA*ELRPESSFPCA
Trigger: GGCACAGGGGAAGGAGGACTCCGGTCTTAACTCCCACGCTAACTTTAGCTCAAGTGGAGTTTTCACCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTATCCCACAGAAACGCTaGGTTCCTTTCATCCCTATG +
Preference number: 3 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLIPQKR*VPFIPM
Trigger: CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGAT...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGGGGGAGGTCTGTTCTaGTTTGGCTTATGGGGAGAA +
Preference number: 3 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFGGGLF*FGLWGE
Trigger: TTCTCCCCATAAGCCAAACAAGAACAGACCTCCCCC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp GAAAGGGGCATTCTCTCCAATGCTCCTTGGAGCCTCTaGGGATCGCCTGATAAGATGCTGCTGGTCCTTTGT +
Preference number: 3 (lower is better)
Translates to: ERGILSNAPWSL*GSPDKMLLVLC
Trigger: ACAAAGGACCAGCAGCATCTTATCAGGCGATCCTCAGAGGCTCCAAGGAGCATTGGAGAGAATGCCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp TTTTTAGCACACTCTATGTGCAAGCCTGTATGGCCCTaGGCGGAACTGGGTGAGAAGGGGCCATTTATCCCG +
Preference number: 3 (lower is better)
Translates to: FLAHSMCKPVWP*AELGEKGPFIP
Trigger: CGGGATAAATGGCCCCTTCTCACCCAGTTCCGCTCAGGGCCATACAGGCTTGCACATAGAGTGTGCTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp CATCATTTTCGTCCTCTTCCCTTGCCTCCCCCACACTaGAGTACTTCCTCTGTAGATCTTCACAGCCCTGGT +
Preference number: 3 (lower is better)
Translates to: HHFRPLPLPPPH*STSSVDLHSPG
Trigger: ACCAGGGCTGTGAAGATCTACAGAGGAAGTACTCCAGTGTGGGGGAGGCAAGGGAAGAGGACGAAAATGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp GGGCGTTCCCACTCCCCTTTTCTGAAACAAGTCCTCTaGTGCTTAGAGCAACTGAATGAATGGGTGGAGCCT +
Preference number: 3 (lower is better)
Translates to: GRSHSPFLKQVL*CLEQLNEWVEP
Trigger: AGGCTCCACCCATTCATTCAGTTGCTCTAAGCACCAGAGGACTTGTTTCAGAAAAGGGGAGTGGGAACGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGACAGGAAGCGGATACTaGGCAAATCTGCGAGGCGAG +
Preference number: 3 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMTGSGY*ANLRGE
Trigger: CTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTGT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTATGGCATCTTCTAAATaGCAACTTGCTCCCTCCCTT +
Preference number: 3 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLMASSK*QLAPSL
Trigger: AAGGGAGGGAGCAAGTTGCAATTTAGAAGATGCCAT...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGCTGCTGGTCCTTTGTaGAACGTCCTTGAGAGACTT +
Preference number: 3 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFAAGPL*NVLERL
Trigger: AAGTCTCTCAAGGACGTTCAACAAAGGACCAGCAGC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGGCCATTTATCCCGTTaGCTGTCACACGATTTGAAT +
Preference number: 3 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLGHLSR*LSHDLN
Trigger: ATTCAAATCGTGTGACAGCAAACGGGATAAATGGCC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGACAGGAAGCGGATACTaGGCAAATCTGCGAGGCGAG +
Preference number: 3 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKTGSGY*ANLRGE
Trigger: CTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTGT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCACTCTCTCCTTTCCCTaGGGGTCTCAAAGCTCTTTT +
Preference number: 3 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFTLSFP*GSQSSF
Trigger: AAAAGAGCTTTGAGACCCCAAGGGAAAGGAGAGAGT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp GCTTTATGCTCCCTCCTCACAGGACATCTGCACACATaGTCACATCTGATTCTCACAACTACGGTGCCTGGG +
Preference number: 3 (lower is better)
Translates to: ALCSLLTGHLHT*SHLILTTTVPG
Trigger: CCCAGGCACCGTAGTTGTGAGAATCAGATGTGATCATGTGTGCAGATGTCCTGTGAGGAGGGAGCATAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp GTAGATCTTCACAGCCCTGGTCGTTTCCTTGCTGCATaGCTGCAAAAGCATCCTTCCAGCACCTCTTCCTTC +
Preference number: 3 (lower is better)
Translates to: VDLHSPGRFLAA*LQKHPSSTSSF
Trigger: GAAGGAAGAGGTGCTGGAAGGATGCTTTTGCAGTCATGCAGCAAGGAAACGACCAGGGCTGTGAAGATCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp TCAGAAGGCAAGGCTCATGTCTGCTGGGTTATTTGGTaGCAGAGACACCAGAAAGTCGGGAGCAGAAAGATG +
Preference number: 3 (lower is better)
Translates to: SEGKAHVCWVIW*QRHQKVGSRKM
Trigger: CATCTTTCTGCTCCCGACTTTCTGGTGTCTCTGGCACCAAATAACCCAGCAGACATGAGCCTTGCCTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp TTCCTCTGTAGATCTTCACAGCCCTGGTCGTTTCCTTaGTGCATGACTGCAAAAGCATCCTTCCAGCACCTC +
Preference number: 3 (lower is better)
Translates to: FLCRSSQPWSFP*CMTAKASFQHL
Trigger: GAGGTGCTGGAAGGATGCTTTTGCAGTCATGCAGCAAGGAAACGACCAGGGCTGTGAAGATCTACAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp ATCTCAGAAGGCAAGGCTCATGTCTGCTGGGTTATTTaGTGCCAGAGACACCAGAAAGTCGGGAGCAGAAAG +
Preference number: 3 (lower is better)
Translates to: ISEGKAHVCWVI*CQRHQKVGSRK
Trigger: CTTTCTGCTCCCGACTTTCTGGTGTCTCTGGCACCAAATAACCCAGCAGACATGAGCCTTGCCTTCTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATATCCCACAGAAACGCTaGGTTCCTTTCATCCCTATG +
Preference number: 3 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNIPQKR*VPFIPM
Trigger: CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGAT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp GGGGGAGGTCTGTTCTTGTTTGGCTTATGGGGAGAATaGAGTTCAGAGAAGGAACCAGACATGGTCAGTGAG +
Preference number: 3 (lower is better)
Translates to: GGGLFLFGLWGE*SSEKEPDMVSE
Trigger: CTCACTGACCATGTCTGGTTCCTTCTCTGAACTTCATTCTCCCCATAAGCCAAACAAGAACAGACCTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp TCCGGAGGTAGAAATGACCACGGTGAAAACTCCACTTaGGCTAAAGTTAGCGTGGGAGTTAAGACCGGAGTC +
Preference number: 3 (lower is better)
Translates to: SGGRNDHGENST*AKVSVGVKTGV
Trigger: GACTCCGGTCTTAACTCCCACGCTAACTTTAGCTCAAGTGGAGTTTTCACCGTGGTCATTTCTACCTCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp CTATGCTCCACAAAGGATATGGCGTGGCCAAACGGCTaGTTGAGATCTGCTCTAAACAATGACCTCAGTGTC +
Preference number: 3 (lower is better)
Translates to: LCSTKDMAWPNG*LRSALNNDLSV
Trigger: GACACTGAGGTCATTGTTTAGAGCAGATCTCAAGCAGCCGTTTGGCCACGCCATATCCTTTGTGGAGCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp CGCATGCCAGGAAAGATCTGGCCGGCAAACACCCACTaGTTAAAAGTCATCTGCCACCCAAATCAAAACACT +
Preference number: 3 (lower is better)
Translates to: RMPGKIWPANTH*LKVICHPNQNT
Trigger: AGTGTTTTGATTTGGGTGGCAGATGACTTTTAAGCAGTGGGTGTTTGCCGGCCAGATCTTTCCTGGCATGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp GCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTaGCGGTACAGAAGTGGACTTCCTCCTGCTCCTGTC +
Preference number: 3 (lower is better)
Translates to: AIEMCFVFTCSV*RYRSGLPPAPV
Trigger: GACAGGAGCAGGAGGAAGTCCACTTCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp CAAAGTTCCATTTCAGACATGAAGGTGAAGGGCCCTTaGAGCTGTAGCACCAGAAGAAGGAGGAAGAATGCG +
Preference number: 3 (lower is better)
Translates to: QSSISDMKVKGP*SCSTRRRRKNA
Trigger: CGCATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTCTGAAATGGAACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp ACACTGGAGTACTTCCTCTGTAGATCTTCACAGCCCTaGTCGTTTCCTTGCTGCATGACTGCAAAAGCATCC +
Preference number: 3 (lower is better)
Translates to: TLEYFLCRSSQP*SFPCCMTAKAS
Trigger: GGATGCTTTTGCAGTCATGCAGCAAGGAAACGACCAGGGCTGTGAAGATCTACAGAGGAAGTACTCCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATATGGCATCTTCTAAATaGCAACTTGCTCCCTCCCTT +
Preference number: 3 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNMASSK*QLAPSL
Trigger: AAGGGAGGGAGCAAGTTGCAATTTAGAAGATGCCAT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGCTCTTTTACATTTCTaGATTCATTACAGAGAGGCT +
Preference number: 3 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLALLHF*IHYREA
Trigger: AGCCTCTCTGTAATGAATCAAGAAATGTAAAAGAGC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCACTCTCTCCTTTCCCTaGGGGTCTCAAAGCTCTTTT +
Preference number: 3 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTTLSFP*GSQSSF
Trigger: AAAAGAGCTTTGAGACCCCAAGGGAAAGGAGAGAGT...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp ACAGCAAAGTGGAAGAAAGGATCAGTTAGGACCTCTTaGAAGCCGCATTCTACAGGATCGGCCTTAGCGATC +
Preference number: 3 (lower is better)
Translates to: TAKWKKGSVRTS*KPHSTGSALAI
Trigger: GATCGCTAAGGCCGATCCTGTAGAATGCGGCTTTCAAGAGGTCCTAACTGATCCTTTCTTCCACTTTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp TCTGAAACAAGTCCTCTGGTGCTTAGAGCAACTGAATaGATGGGTGGAGCCTCAGTTCCTCTAGTATCTCCC +
Preference number: 3 (lower is better)
Translates to: SETSPLVLRATE*MGGASVPLVSP
Trigger: GGGAGATACTAGAGGAACTGAGGCTCCACCCATTCATTCAGTTGCTCTAAGCACCAGAGGACTTGTTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp GATTCTAAAATCTCAGAAGGCAAGGCTCATGTCTGCTaGGTTATTTGGTGCCAGAGACACCAGAAAGTCGGG +
Preference number: 3 (lower is better)
Translates to: DSKISEGKAHVC*VIWCQRHQKVG
Trigger: CCCGACTTTCTGGTGTCTCTGGCACCAAATAACCCAGCAGACATGAGCCTTGCCTTCTGAGATTTTAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCGTACAATCTAGGATGTaGGCACAGCAACAAAACAGC +
Preference number: 3 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCVQSRM*AQQQNS
Trigger: GCTGTTTTGTTGCTGTGCCAACATCCTAGATTGTAC...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCAAAACAGAACAGCCCTaGCCACTGTTTTCTTTACCA +
Preference number: 3 (lower is better)
Translates to: PALLLFQRCPDENWLHLTKTEQP*PLFSLP
Trigger: TGGTAAAGAAAACAGTGGCAAGGGCTGTTCTGTTTT...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCAAAACAGAACAGCCCTaGCCACTGTTTTCTTTACCA +
Preference number: 3 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTKTEQP*PLFSLP
Trigger: TGGTAAAGAAAACAGTGGCAAGGGCTGTTCTGTTTT...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp AGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATaGGCTGTCACACGACGTATGGCATCTTCTAAATTG +
Preference number: 3 (lower is better)
Translates to: SVQTIASPVKGS*AVTRRMASSKL
Trigger: CAATTTAGAAGATGCCATACGTCGTGTGACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp CTGATAAGATGCTGCTGGTCCTTTGTTGAACGTCCTTaGGAGACTTACTCTCCTGCACTCCTTCTCTTTCAG +
Preference number: 3 (lower is better)
Translates to: LIRCCWSFVERP*ETYSPALLLFQ
Trigger: CTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAACAAAGGACCAGCAGCATCTTATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp TTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTaGTTCCACAGGAAGCGGATACTTGGCAAATCTGCG +
Preference number: 3 (lower is better)
Translates to: FQTPTQLISFWS*FHRKRILGKSA
Trigger: CGCAGATTTGCCAAGTATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGATTTCCTTTTGGTCTaGCTTCCACAGGAAGCGGAT +
Preference number: 3 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRDFLLV*LPQEAD
Trigger: ATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAATC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATAAGTGCTGCTGGCTTTaGGCCAAAATACATATATTT +
Preference number: 3 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNKCCWL*AKIHIF
Trigger: AAATATATGTATTTTGGCCAAAAGCCAGCAGCACTT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTCCAGTGATTACACTTaGGAAACCTGTTTTAGCTGT +
Preference number: 3 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTSSDYT*ETCFSC
Trigger: ACAGCTAAAACAGGTTTCCAAAGTGTAATCACTGGA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACTCCAGTGATTACACTTaGGAAACCTGTTTTAGCTGT +
Preference number: 3 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDSSDYT*ETCFSC
Trigger: ACAGCTAAAACAGGTTTCCAAAGTGTAATCACTGGA...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGATGCTGCTGGTCCTTaGTTGAACGTCCTTGAGAGA +
Preference number: 3 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMDAAGP*LNVLER
Trigger: TCTCTCAAGGACGTTCAACAAAGGACCAGCAGCATC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTTGCTGTCACACGATTaGAATTCATTACAAGGTGTC +
Preference number: 3 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTLLSHD*NSLQGV
Trigger: GACACCTTGTAATGAATTCAAATCGTGTGACAGCAA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp CACATTTGCAGGAGGAACAGTACAGCATATGCGACTTaGACTTGGCCCTGTACTATTCCCAACTTGTACACT +
Preference number: 3 (lower is better)
Translates to: HICRRNSTAYAT*TWPCTIPNLYT
Trigger: AGTGTACAAGTTGGGAATAGTACAGGGCCAAGTTCAAGTCGCATATGCTGTACTGTTCCTCCTGCAAATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp ACATATATTTCAACTGAACCCAAGTGTTCAGACAATTaGCAGCCCAGTGAAAGGCTCATGAGCTGTCACACG +
Preference number: 3 (lower is better)
Translates to: TYISTEPKCSDN*QPSERLMSCHT
Trigger: CGTGTGACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGTTGAAATATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp GTTGACTATGCCATAGAAATGTGTTTTGTGTTCACATaGTCTGTCTGCCGGTACAGAAGTGGACTTCCTCCT +
Preference number: 3 (lower is better)
Translates to: VDYAIEMCFVFT*SVCRYRSGLPP
Trigger: AGGAGGAAGTCCACTTCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp ATAGATAACCCACTATGCTCCACAAAGGATATGGCGTaGCCAAACGGCTGCTTGAGATCTGCTCTAAACAAT +
Preference number: 3 (lower is better)
Translates to: IDNPLCSTKDMA*PNGCLRSALNN
Trigger: ATTGTTTAGAGCAGATCTCAAGCAGCCGTTTGGCCACGCCATATCCTTTGTGGAGCATAGTGGGTTATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTGATTTCCTTTTGGTCTaGCTTCCACAGGAAGCGGAT +
Preference number: 3 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPDFLLV*LPQEAD
Trigger: ATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAATC...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCAAGTGCTGCTGGCTTTaGGCCAAAATACATATATTT +
Preference number: 3 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTKCCWL*AKIHIF
Trigger: AAATATATGTATTTTGGCCAAAAGCCAGCAGCACTT...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCTTCTTTCCCCACATTaGCAGGAGGAACAGTACAGC +
Preference number: 3 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHLLSPH*QEEQYS
Trigger: GCTGTACTGTTCCTCCTGCAAATGTGGGGAAAGAAG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp TCGTACACGTACCAGTCTCAATCCCACAGAAACGCTTaGTTCCTTTCATCCCTATGCTGTCTATACAGTTTA +
Preference number: 3 (lower is better)
Translates to: SYTYQSQSHRNA*FLSSLCCLYSL
Trigger: TAAACTGTATAGACAGCATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp AGAAGAAGGAGGAAGAATGCGGGTGATGGCTTTGTTTaGAGTCATCAGGCTCTACAACCTATCATTTGGTTT +
Preference number: 3 (lower is better)
Translates to: RRRRKNAGDGFV*SHQALQPIIWF
Trigger: AAACCAAATGATAGGTTGTAGAGCCTGATGACTCCAAACAAAGCCATCACCCGCATTCTTCCTCCTTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAAAGTCACTTCAGAAGTaGACGTCTCCCCAAGATATT +
Preference number: 3 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRKSLQK*TSPQDI
Trigger: AATATCTTGGGGAGACGTCAACTTCTGAAGTGACTT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp TGTCACACACACAAGCATGGACTTAGCAATGTACCATaGTGTTGCGATTTCCAAGTCATCTTCATAGTGGAG +
Preference number: 3 (lower is better)
Translates to: CHTHKHGLSNVP*CCDFQVIFIVE
Trigger: CTCCACTATGAAGATGACTTGGAAATCGCAACATCATGGTACATTGCTAAGTCCATGCTTGTGTGTGTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCAAACACCCACTCAGTaGATTTCCTTTTGGTCTTGC +
Preference number: 3 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHQTPTQ*ISFWSC
Trigger: GCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp CAGCAAACCATGATTGTCAAGTTTAAGTTGCAGTATTaGTGCCACAGTTGGCCTCAATTTGCTCTGCACATT +
Preference number: 3 (lower is better)
Translates to: QQTMIVKFKLQY*CHSWPQFALHI
Trigger: AATGTGCAGAGCAAATTGAGGCCAACTGTGGCATCAATACTGCAACTTAAACTTGACAATCATGGTTTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTTGCTGTCACACGATTaGAATTCATTACAAGGTGTC +
Preference number: 3 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMLLSHD*NSLQGV
Trigger: GACACCTTGTAATGAATTCAAATCGTGTGACAGCAA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATAAGTCACTTCAGAAGTaGACGTCTCCCCAAGATATT +
Preference number: 3 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHKSLQK*TSPQDI
Trigger: AATATCTTGGGGAGACGTCAACTTCTGAAGTGACTT...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp GAAGGGGCCATTTATCCCGTTTGCTGTCACACGATTTaGATTCATTACAAGGTGTCCATAATAAAATTCTGC +
Preference number: 3 (lower is better)
Translates to: EGAIYPVCCHTI*IHYKVSIIKFC
Trigger: GCAGAATTTTATTATGGACACCTTGTAATGAATTCAAATCGTGTGACAGCAAACGGGATAAATGGCCCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp AAAGACATCAAAATTGCTTTTACGGTCAGCCCAATTTaGAACAGAACCCTCTTTCTGCAATGCTCAAAGGAG +
Preference number: 3 (lower is better)
Translates to: KDIKIAFTVSPI*NRTLFLQCSKE
Trigger: CTCCTTTGAGCATTGCAGAAAGAGGGTTCTGTTTCAAATTGGGCTGACCGTAAAAGCAATTTTGATGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp CGATTATTAAATCGTATACCCATACTGAGATTTCAGTaGCTGTTTGAGGACCAGCAAACCATGATTGTCAAG +
Preference number: 3 (lower is better)
Translates to: RLLNRIPILRFQ*LFEDQQTMIVK
Trigger: CTTGACAATCATGGTTTGCTGGTCCTCAAACAGGCACTGAAATCTCAGTATGGGTATACGATTTAATAATCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR-3UTR CAA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATGCTCTTTTACATTTCTaGATTCATTACAGAGAGGCT +
Preference number: 3 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHALLHF*IHYREA
Trigger: AGCCTCTCTGTAATGAATCAAGAAATGTAAAAGAGC...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR TCA 72 bp AAAGGGATGAGAGAGACTTATATAACAACTAATTTGTaGATTACTGCCAATGCACTGCAAATCAGTGTCCGA +
Preference number: 3 (lower is better)
Translates to: KGMRETYITTNL*ITANALQISVR
Trigger: TCGGACACTGATTTGCAGTGCATTGGCAGTAATTCACAAATTAGTTGTTATATAAGTCTCTCTCATCCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR GCA 72 bp GTGACTGGTAGGGATGTATGTATAACAATTTCGTGGTaGTGGGAATTATTAAATAACTTCTGCTTACAGAAG +
Preference number: 3 (lower is better)
Translates to: VTGRDVCITISW*WELLNNFCLQK
Trigger: CTTCTGTAAGCAGAAGTTATTTAATAATTCCCAGCACCACGAAATTGTTATACATACATCCCTACCAGTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CCA 72 bp AATGTGACTGGTAGGGATGTATGTATAACAATTTCGTaGTGCTGGGAATTATTAAATAACTTCTGCTTACAG +
Preference number: 3 (lower is better)
Translates to: NVTGRDVCITIS*CWELLNNFCLQ
Trigger: CTGTAAGCAGAAGTTATTTAATAATTCCCAGCACCACGAAATTGTTATACATACATCCCTACCAGTCACATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCAGTGCCCGCGGCGCTTaGCGCGCAGGCGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTSARGA*RAGGSC
Trigger: ACAAGATCCGCCTGCGCGCCAAGCGCCGCGGGCACT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTTCCCGAACTGGGCAGTaGTGGCCCGCTCTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPSRTGQ*WPALRS
Trigger: GCTCCGCAGAGCGGGCCACCACTGCCCAGTTCGGGA...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCAGGACCCCCACTGGGTaGCTCGCCTCTCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTRTPTG*LASLPG
Trigger: CCCAGGAAGAGAGGCGAGCCACCCAGTGGGGGTCCT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCGTGCATGGTCTGGCGTaGCTCCTCGATGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTVHGLA*LLDGRL
Trigger: CAGCCGTCCATCGAGGAGGCACGCCAGACCATGCAC...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTCCCTCTGGCAGCAAATaGGGCTTCGGCGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPPSGSK*GFGGGL
Trigger: CAGGCCTCCGCCGAAGCCCCATTTGCTGCCAGAGGG...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCTCTGCATCTGTGCCCTaGGGTACACCCGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTSASVP*GTPGVA
Trigger: AGCGACACCGGGTGTACCGCAGGGCACAGATGCAGA...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTTCGTCCAGGAGGGAGTaGATGGTCTGGCGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPSSRRE*MVWRAS
Trigger: GGAGGCACGCCAGACCATGCACTCCCTCCTGGACGA...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGCGGAGAGAGCTCATCTaGGGCGCACGAGGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKRRELI*GARGRP
Trigger: CGGCCGGCCTCGTGCGCCCCAGATGAGCTCTCTCCG...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCGCTCGCCTCTCTTCCTaGGAAGGGGTGCTGTTTGCG +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTARLSS*EGVLFA
Trigger: CGCAAACAGCACCCCTTCCCAGGAAGAGAGGCGAGC...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCGTCCGAGCATGTGTGTaGCCTCTCTTCGCCCCGCTT +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTVRACV*PLFAPL
Trigger: AAGCGGGGCGAAGAGAGGCCACACACATGCTCGGAC...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422774.2
CDS-3UTR GCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGGTGCCGGGATCGGCTaGATGGCGATAAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPGAGIG*MAISWI
Trigger: GATCCAGCTTATCGCCATGCAGCCGATCCCGGCACC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCCTGGCGCTGGCACCTTaGTCCGGAGGTAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTLALAP*SGGRND
Trigger: GTCATTTCTACCTCCGGAGCAAGGTGCCAGCGCCAG...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCGGCCCTGAGCGGAACTaGGTGAGAAGGGGCCATTTA +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTGPERN*VRRGHL
Trigger: TAAATGGCCCCTTCTCACCCAGTTCCGCTCAGGGCC...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGCAGGTACGCGTCAGTaGTCAACACCGTACCAGTGG +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPAGTRQ*STPYQW
Trigger: CCACTGGTACGGTGTTGATCACTGACGCGTACCTGC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCCTTGGAAGGGATCTTTaGCTTGGGGCTTGGCACGTC +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTLGRDL*LGAWHV
Trigger: GACGTGCCAAGCCCCAAGTCAAAGATCCCTTCCAAG...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCGCTCCTTGGAGCCTCTaGGGATCGCCTGATAAGATG +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTAPWSL*GSPDKM
Trigger: CATCTTATCAGGCGATCCTCAGAGGCTCCAAGGAGC...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCGGGCATTCTCTCCAATaGTCCTTGGAGCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTGHSLQ*SLEPLR
Trigger: CCTCAGAGGCTCCAAGGAGCATTGGAGAGAATGCCC...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGGCGTGCCTCCTCGATaGACGGCTGGGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKGVPPR*TAGVGC
Trigger: ACATCCCACCCCAGCCGTCCATCGAGGAGGCACGCC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCCTGGCAAAACTGTTGTaGCAGGCGTCGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTLAKLL*QASRGS
Trigger: GCTTCCTCTCGACGCCTGCCACAACAGTTTTGCCAG...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTCCACGTCTTTCTCCATaGGGCTCGTGGCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPPRLSP*GSWPEL
Trigger: AAGTTCTGGCCACGAGCCTCATGGAGAAAGACGTGG...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGCTGAGCTCCAATTCTaGTGGCAATCCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPAELQF*WQSPPV
Trigger: CACAGGTGGGGATTGCCAGCAGAATTGGAGCTCAGC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCACTCCAGGGCAGCTCTaGCGAGCAACCTTTCCTATT +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTTPGQL*RATFPI
Trigger: AATAGGAAAGGTTGCTCGGCAGAGCTGCCCTGGAGT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGGCGGGGCTGTGACATaGAGAGGACTGCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKGGAVT*RGLLCW
Trigger: CCAGCACAGCAGTCCTCTCCATGTCACAGCCCCGCC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCATCTGTCTGCACTTGTaGCCCAAACCTCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTICLHL*PKPPLE
Trigger: CTCCAGAGGAGGTTTGGGCCACAAGTGCAGACAGAT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTAGTGGTCACGCTGGATaGCGTCACTTGGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPSGHAG*RHLGFS
Trigger: GCTGAAACCCAAGTGACGCCATCCAGCGTGACCACT...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTTCCGAGGGCGTGGTGTaGTCCTTCAGAGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLSEGVV*SFRGPG
Trigger: GCCAGGACCTCTGAAGGACCACACCACGCCCTCGGA...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCGCTGGGGAGGGGCGCTaGACGGGAGGTGCCGGGATC +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTAGEGR*TGGAGI
Trigger: GATCCCGGCACCTCCCGTCCAGCGCCCCTCCCCAGC...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCGCGGTGCTGGCAGGCTaGCTGCTGGGGGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCAVLAG*LLGATR
Trigger: CCTCGTGGCCCCCAGCAGCCAGCCTGCCAGCACCGC...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGTCAGGTGCTGGATCTaGGAGCCTGTGGTACCCCCG +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLVRCWI*EPVVPP
Trigger: CGGGGGTACCACAGGCTCCCAGATCCAGCACCTGAC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTTTATCGTGCCTCAGCTaGGACTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPLSCLS*DYRHAP
Trigger: TGGCGCATGCCTGTAGTCCCAGCTGAGGCACGATAA...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGCTCCACAAAGGATATaGCGTGGCCAAACGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPAPQRI*RGQTAA
Trigger: AGCAGCCGTTTGGCCACGCCATATCCTTTGTGGAGC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGAAGAGATGGAGCCGCTaGGTTCCAGCGGGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKKRWSR*VPAGVL
Trigger: CAACACCCCCGCTGGAACTCAGCGGCTCCATCTCTT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCAGGCATCGGGGACTGTaGTATCACAAACATATGGCG +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTRHRGL*YHKHMA
Trigger: CGCCATATGTTTGTGATATCACAGTCCCCGATGCCT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCCGTTTCCTTGCTGCATaGCTGCAAAAGCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTRFLAA*LQKHPS
Trigger: GGAAGGATGCTTTTGCAGTCATGCAGCAAGGAAACG...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGTGGAGAGGACTGCTGTaGTGGGAGCCGGGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKWRGLL*WEPGAV
Trigger: AACTGCTCCCGGCTCCCAGCACAGCAGTCCTCTCCA...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTATACTGGAAGGGCTCTaGGATCTGCAGCACTGGGTA +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPILEGL*DLQHWV
Trigger: TACCCAGTGCTGCAGATCGCAGAGCCCTTCCAGTAT...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGTCGATCTGCATCTGTaGCCTGCGGTACACCCGGTG +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLVDLHL*PAVHPV
Trigger: CACCGGGTGTACCGCAGGGCACAGATGCAGATCGAC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTTCCTTCCACGCCATTTaGCTGGGTAGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLSFHAI*LGSCPA
Trigger: GGCAGGGCAGCTACCCAGGCAAATGGCGTGGAAGGA...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCACAGAGAGGCGGCCGTaGGCAGGGGGAACCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFTERRP*AGGTCV
Trigger: CACACAGGTTCCCCCTGCCCACGGCCGCCTCTCTGT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCAAGGGATCTTTGACTTaGGGCTTGGCACGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTKGSLT*GLARLH
Trigger: ATGGAGACGTGCCAAGCCCCAAGTCAAAGATCCCTT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGGACAGCCGTTGACCTaGTGTTTCCGGCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLGQPLT*CFRRGL
Trigger: CAAGCCTCGCCGGAAACACCAGGTCAACGGCTGTCC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTAGGGAGTGCATGGTCTaGCGTGCCTCCTCGATGGAC +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLRECMV*RASSMD
Trigger: GTCCATCGAGGAGGCACGCCAGACCATGCACTCCCT...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGTGCGGGCAGGCCGGGTaGGACTCCGGGGCCTACACC +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKCGQAG*DSGAYT
Trigger: GGTGTAGGCCCCGGAGTCCCACCCGGCCTGCCCGCA...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGCTCGCCTCTCTTCCTaGGAAGGGGTGCTGTTTGCG +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKARLSS*EGVLFA
Trigger: CGCAAACAGCACCCCTTCCCAGGAAGAGAGGCGAGC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCAGGACCCCCACTGGGTaGCTCGCCTCTCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFRTPTG*LASLPG
Trigger: CCCAGGAAGAGAGGCGAGCCACCCAGTGGGGGTCCT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCTTGCCTCCCCCACACTaGAGTACTTCCTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTLPPPH*STSSVD
Trigger: ATCTACAGAGGAAGTACTCCAGTGTGGGGGAGGCAA...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCAGACGGCGGGGCTGTaGCATGGAGAGGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFQTAGL*HGEDCC
Trigger: ACAGCAGTCCTCTCCATGTCACAGCCCCGCCGTCTG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGCAGGTACGCGTCAGTaGTCAACACCGTACCAGTGG +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKAGTRQ*STPYQW
Trigger: CCACTGGTACGGTGTTGATCACTGACGCGTACCTGC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCCCAGCAGAGGGCTGGTaGTCCGGGGGCCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTPAEGW*SGGLLT
Trigger: TGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGG...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCAAATCAGTGTCCGAATaGCTGGCTTGGTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTKSVSE*LAWSLE
Trigger: TTCCAGTGACCAAGCCAGTCATTCGGACACTGATTT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGAGGTGAAGGCACAGTaGAGGCCGCACACCAAGTGT +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLEVKAQ*RPHTKC
Trigger: ACACTTGGTGTGCGGCCTGCACTGTGCCTTCACCTC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGCAGCTGGGCCAGCTTaGGTTCCATCTCGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLAAGPA*VPSRLE
Trigger: TTCAAGCCGAGATGGAACGCAAGCTGGCCCAGCTGC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCACCCAAGATGATGGCTaGTCTCTGGAGGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTTQDDG*SLEVHF
Trigger: AAAATGGACCTCCAGAGAGCAGCCATCATCTTGGGT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGTCCGGGGCCTACACCTaGGGTGCTGGCAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMSGAYT*GAGRLA
Trigger: AGCCAGCCTGCCAGCACCGCAGGTGTAGGCCCCGGA...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCTCCGGGGCCTACACCTaGGGTGCTGGCAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGASGAYT*GAGRLA
Trigger: AGCCAGCCTGCCAGCACCGCAGGTGTAGGCCCCGGA...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCTCCCTTGGGCAGGCTaGCCGAGAGTTGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFLPWAG*PRVAPS
Trigger: GGAAGGAGCAACTCTCGGGCAGCCTGCCCAAGGGAG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGCTGGCGCTGGCACCTTaGTCCGGAGGTAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKLALAP*SGGRND
Trigger: GTCATTTCTACCTCCGGAGCAAGGTGCCAGCGCCAG...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGAGCTGAGGGCTCCCTaGCTGAAGTCCTTGGCACGG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFELRAP*LKSLAR
Trigger: CCGTGCCAAGGACTTCAGGCAGGGAGCCCTCAGCTC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440172.5
CDS-3UTR CCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGGATCTAGAAGAAAGTaGGACGATAGGTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPGSRRK*DDRSGG
Trigger: CCCTCCAGACCTATCGTCCCACTTTCTTCTAGATCC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCTCTAGAGCACTGATTTaGTCGTCAGGAGGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTSRALI*SSGGVR
Trigger: TCTGACACCTCCTGACGACCAAATCAGTGCTCTAGA...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATACACGGAGGGCACGCTaGCCGTGGGGTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNTRRAR*PWGPGS
Trigger: AGATCCTGGACCCCACGGCCAGCGTGCCCTCCGTGT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGTGTCTGCACATCGGCTaGGAGGTCAGGATCCGATGG +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKCLHIG*EVRIRW
Trigger: CCATCGGATCCTGACCTCCCAGCCGATGTGCAGACA...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTGGGGTGGGATGTACTaGGAGGCCGGGAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFWGGMY*EAGKGR
Trigger: CCTTCCCTTCCCGGCCTCCCAGTACATCCCACCCCA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCTACACCTGCGGTGCTaGCAGGCTGGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCLHLRC*QAGCWG
Trigger: CCCCCAGCAGCCAGCCTGCCAGCACCGCAGGTGTAG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTTTCGGCGGAGGCCTGTaGCTGCTGAGGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCFGGGL*LLRVRG
Trigger: CCCCCTGACCCTCAGCAGCCACAGGCCTCCGCCGAA...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGTCAGGTGCTGGATCTaGGAGCCTGTGGTACCCCCG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFVRCWI*EPVVPP
Trigger: CGGGGGTACCACAGGCTCCCAGATCCAGCACCTGAC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCCCTGCAGTCCCCGGTaGGGGAGGTTCCCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMPCSPR*GRFPEG
Trigger: TCCTTCCGGGAACCTCCCCCACCGGGGACTGCAGGG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCAGAGAGGCCGAGGAGTaGCCAGGCTGGAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFREAEE*PGWRSS
Trigger: GGAAGACCTCCAGCCTGGCCACTCCTCGGCCTCTCT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGAGGCCGATCAGCTGTaGAAGTTCTGCACGGTGCTC +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLEADQL*KFCTVL
Trigger: GAGCACCGTGCAGAACTTCCACAGCTGATCGGCCTC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGAGGCCGATCAGCTGTaGAAGTTCTGCACGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKEADQL*KFCTVL
Trigger: GAGCACCGTGCAGAACTTCCACAGCTGATCGGCCTC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 72 bp AGCCCAAAGCCTTTAGCGCCTACCTTCACCCGTGCTTaGCCTCACAGTCCGCATGCCAGGAAAGATCTGGCC +
Preference number: 4 (lower is better)
Translates to: SPKPLAPTFTRA*PHSPHARKDLA
Trigger: GGCCAGATCTTTCCTGGCATGCGGACTGTGAGGCAAAGCACGGGTGAAGGTAGGCGCTAAAGGCTTTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCCTCCTCTGGAGGCTGTaGGACCTCCCCCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTLLWRL*DLPQGG
Trigger: CCCTCCTTGGGGGAGGTCTCACAGCCTCCAGAGGAG...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCTCCTCTGGAGGCTGTaGGACCTCCCCCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCLLWRL*DLPQGG
Trigger: CCCTCCTTGGGGGAGGTCTCACAGCCTCCAGAGGAG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCAATGGTGATGTTGCTTaGATCCCGGCAGTCAAAATG +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTNGDVA*IPAVKM
Trigger: CATTTTGACTGCCGGGATTCAAGCAACATCACCATT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGACCGTCTAGAGCACTaGTTTGGTCGTCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKDRLEH*FGRQEV
Trigger: CACCTCCTGACGACCAAATCAGTGCTCTAGACGGTC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCGCACCTCTGTGGGTGTaGGTGATGGGCCCACGACGG +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTAPLWV*VMGPRR
Trigger: CCGTCGTGGGCCCATCACTCACACCCACAGAGGTGC...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGCAACTGAGATAAGTTaGGCTGTGGATACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPATEIS*AVDTGR
Trigger: CCTTCCAGTATCCACAGCTCAACTTATCTCAGTTGC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGGAGTTGCTTCTCCATaGCGCCCAGGAGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLGVASP*RPGELF
Trigger: GAACAGTTCTCCTGGGCGTCATGGAGAAGCAACTCC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCAGTGGCGCTGGCTCATaGATAATCAATATGTCGTCT +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTSGAGS*IINMSS
Trigger: AGACGACATATTGATTATTCATGAGCCAGCGCCACT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTCTTGGAAGGGATCTTTaGCTTGGGGCTTGGCACGTC +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLLGRDL*LGAWHV
Trigger: GACGTGCCAAGCCCCAAGTCAAAGATCCCTTCCAAG...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGGCTTATGGGGAGAATaGAGTTCAGAGAAGGAACCA +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPGLWGE*SSEKEP
Trigger: TGGTTCCTTCTCTGAACTTCATTCTCCCCATAAGCC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGCTCTTGATCTCAAGTaGTCCACCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKALDLK*STCLSL
Trigger: GAGGCTGAGGCAGGTGGATCACTTGAGATCAAGAGC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTCTTAGAGCAACTGAATaGATGGGTGGAGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPLRATE*MGGASV
Trigger: AACTGAGGCTCCACCCATTCATTCAGTTGCTCTAAG...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGATGTGTCCTGCTGAATaGAAGGGCTGCGTGCGATGC +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKMCPAE*KGCVRC
Trigger: GCATCGCACGCAGCCCTTGCATTCAGCAGGACACAT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTCTTCCAGCACGGTCATaGACAGAGTCTCGGCACCAT +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLLPARS*TESRHH
Trigger: ATGGTGCCGAGACTCTGTGCATGACCGTGCTGGAAG...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCAACCTTCAGTTCCACTaGACGGTTGAAGTGAATCCT +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTNLQFH*TVEVNP
Trigger: AGGATTCACTTCAACCGTGCAGTGGAACTGAAGGTT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCAGTGGTGGCCCGCTCTaGGGAGCTCTGTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTSGGPL*GALWDL
Trigger: CAGGTCCCACAGAGCTCCGCAGAGCGGGCCACCACT...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGAGGCTGATGAGTGCTaGTCATTTCCCGAACTGGGC +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLEADEC*SFPELG
Trigger: GCCCAGTTCGGGAAATGAGCAGCACTCATCAGCCTC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTATCTTGTTGCGATGGTaGTCGATCTCAGACTTGTGC +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPILLRW*SISDLC
Trigger: GCACAAGTCTGAGATCGAGCACCATCGCAACAAGAT...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCCCACCTGTGTCAGGTaGTGGATCTGGGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFPTCVR*WIWEPV
Trigger: CACAGGCTCCCAGATCCAGCACCTGACACAGGTGGG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTCATACTGGCTGCCTCTaGTTGGCGGGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLHTGCL*LAGFPL
Trigger: CAGTGGAAATCCCGCCAAGCAGAGGCAGCCAGTATG...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGAGCTCCTCGCGGATTaGTTTGATGAGAGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLELLAD*FDERGR
Trigger: TCGGCCTCTCTCATCAAAGCAATCCGCGAGGAGCTC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATGGCGGGGCTGTGACATaGAGAGGACTGCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNGGAVT*RGLLCW
Trigger: CCAGCACAGCAGTCCTCTCCATGTCACAGCCCCGCC...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTAGTGGTCACGCTGGATaGCGTCACTTGGGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLSGHAG*RHLGFS
Trigger: GCTGAAACCCAAGTGACGCCATCCAGCGTGACCACT...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCCGAGGGGACCACCAGTaGCAGCACCGGTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTRGDHQ*QHRCWL
Trigger: CAACCAGCACCGGTGCTGCCACTGGTGGTCCCCTCG...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGATATCACAAACATATaGCGGCTTGGCAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPDITNI*RLGSSQ
Trigger: CTGGCTACTGCCAAGCCGCCATATGTTTGTGATATC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGCTGGGGAGGGGCGCTaGACGGGAGGTGCCGGGATC +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRAGEGR*TGGAGI
Trigger: GATCCCGGCACCTCCCGTCCAGCGCCCCTCCCCAGC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATAGGGCACGCTGGCCGTaGGGTCCAGGATCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNRARWP*GPGSCR
Trigger: TCGACAAGATCCTGGACCCCACGGCCAGCGTGCCCT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCGATGGACGGCTGGGGTaGGATGTACTGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTDGRLG*DVLGGR
Trigger: CCGGCCTCCCAGTACATCCCACCCCAGCCGTCCATC...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCGATGGACGGCTGGGGTaGGATGTACTGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTDGRLG*DVLGGR
Trigger: CCGGCCTCCCAGTACATCCCACCCCAGCCGTCCATC...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTGGCGTGCCTCCTCGATaGACGGCTGGGGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCGVPPR*TAGVGC
Trigger: ACATCCCACCCCAGCCGTCCATCGAGGAGGCACGCC...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGCTACACCTGCGGTGCTaGCAGGCTGGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMLHLRC*QAGCWG
Trigger: CCCCCAGCAGCCAGCCTGCCAGCACCGCAGGTGTAG...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATGCGGGCAGGCCGGGTaGGACTCCGGGGCCTACACC +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRCGQAG*DSGAYT
Trigger: GGTGTAGGCCCCGGAGTCCCACCCGGCCTGCCCGCA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGTTCGGCGGAGGCCTGTaGCTGCTGAGGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKFGGGL*LLRVRG
Trigger: CCCCCTGACCCTCAGCAGCCACAGGCCTCCGCCGAA...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACCCCTCTGGCAGCAAATaGGGCTTCGGCGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDPSGSK*GFGGGL
Trigger: CAGGCCTCCGCCGAAGCCCCATTTGCTGCCAGAGGG...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACGGATCTGGGAGCCTGTaGTACCCCCGACAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDGSGSL*YPRQAE
Trigger: CTCGGCCTGTCGGGGGTACCACAGGCTCCCAGATCC...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCACGGTGCTCTGTTTCTaGGAGAGCCGGAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFTVLCF*ESRRSS
Trigger: GGAGCTCCTCCGGCTCTCCCAGAAACAGAGCACCGT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCACAACTACGGTGCCTaGGAGGTGGCGGGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMHNYGA*EVAGEV
Trigger: GACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTAAGGCTCATGTCTGCTaGGTTATTTGGTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPKAHVC*VIWCQR
Trigger: TCTCTGGCACCAAATAACCCAGCAGACATGAGCCTT...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTCCATCTCATCGTCATTaGCGGCCACCTCTTTACTCG +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLPSHRH*RPPLYS
Trigger: CGAGTAAAGAGGTGGCCGTCAATGACGATGAGATGG...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCACCGGGCTCAGGATATaGGTGTTGTCCACAGGACCG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFTGLRI*VLSTGP
Trigger: CGGTCCTGTGGACAACACTCATATCCTGAGCCCGGT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATAGCAGTAGGATCAAGTaGCGCCGGCACAGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNSSRIK*RRHREA
Trigger: CGCCTCTCTGTGCCGGCGTCACTTGATCCTACTGCT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCTTCATGGGAAATGAGTaGAGACTCAAGATAGGAGGT +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTFMGNE*RLKIGG
Trigger: ACCTCCTATCTTGAGTCTTCACTCATTTCCCATGAA...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCTCTGTGGGTGTGAGTaGTGGGCCCACGACGGTCAG +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMLCGCE*WAHDGQ
Trigger: CTGACCGTCGTGGGCCCATCACTCACACCCACAGAG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCTCTGTGGGTGTGAGTaGTGGGCCCACGACGGTCAG +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCLCGCE*WAHDGQ
Trigger: CTGACCGTCGTGGGCCCATCACTCACACCCACAGAG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGTGGTGGAAACCTCGCTaGGCAGCTGGGCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMWWKPR*AAGPAC
Trigger: GCAAGCTGGCCCAGCTGCTCAGCGAGGTTTCCACCA...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCTGGTGGAAACCTCGCTaGGCAGCTGGGCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTWWKPR*AAGPAC
Trigger: GCAAGCTGGCCCAGCTGCTCAGCGAGGTTTCCACCA...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGTTTCCAGTAGAGGATaGCAACAATCACCATCACCA +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPVSSRG*QQSPSP
Trigger: TGGTGATGGTGATTGTTGTCATCCTCTACTGGAAAC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGCCACAGTGTCAGGCTaGAAGTCTAGCTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLATVSG*KSSLSV
Trigger: CACAGACAAGCTAGACTTTCAGCCTGACACTGTGGC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCGGGACCTGCCATCGTTaGCGGCTCCCGGCGTCTTAT +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCGTCHR*RLPASY
Trigger: ATAAGACGCCGGGAGCCGTCAACGATGGCAGGTCCC...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGCGGCAGGACAGCCGTTaGCCTGGTGTTTCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMRQDSR*PGVSGE
Trigger: CTCGCCGGAAACACCAGGTCAACGGCTGTCCTGCCG...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCTGAGCGGAACTGGGTaGGAAGGGGCCATTTATCCC +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFLSGTG*EGAIYP
Trigger: GGGATAAATGGCCCCTTCTCACCCAGTTCCGCTCAG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCTTTAGAAATGTGAAGTaGCCCCTGAAAAACCTGGAG +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTFRNVK*PLKNLE
Trigger: CTCCAGGTTTTTCAGGGGTCACTTCACATTTCTAAA...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTATTTCAGTGCCTGTTTaGGGACCAGCAAACCATGAT +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPISVPV*GPANHD
Trigger: ATCATGGTTTGCTGGTCCTCAAACAGGCACTGAAAT...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTTACTCATTAGAGAGATaGTGCTTTCTTCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPYSLER*CFLPAR
Trigger: CCGTGCTGGAAGAAAGCAGCATCTCTCTAATGAGTA...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTCCACCTCGGCAGAAATaGCAACACTCGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLPPRQK*QHSSLR
Trigger: TCTCAGAGACGAGTGTTGGCATTTCTGCCGAGGTGG...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACTCGTCCAGGAGGGAGTaGATGGTCTGGCGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDSSRRE*MVWRAS
Trigger: GGAGGCACGCCAGACCATGCACTCCCTCCTGGACGA...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAGGAAGGGGTGCTGTTTaGGGGCAGGCCGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEGRGAV*GQAGWD
Trigger: GTCCCACCCGGCCTGCCCGCAAACAGCACCCCTTCC...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTACCAGCTCTGTAGACTaGAGCAAACCGGGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLTSSVD*SKPGPK
Trigger: TTTTGGCCCCGGTTTGCTGCAGTCTACAGAGCTGGT...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTCTTCTCTTTCAGAGGTaGCCAGATGAAAACTGGCTA +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPLLFQR*PDENWL
Trigger: TAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAG...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGAAGTGGACTTCCTCCTaGTCCTGTCCAGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKKWTSS*SCPGQM
Trigger: CATTTGCCCTGGACAGGAGCAGGAGGAAGTCCACTT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTGACAGGACCTCACCCTaGAGCCCAGGCTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCDRTSP*SPGWSA
Trigger: TGCACTCCAGCCTGGGCTGCAGGGTGAGGTCCTGTC...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACGCTAGCCAGACTCCCTaGGTCCCAGAGATGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDASQTP*VPEMLR
Trigger: CCGGAGCATCTCTGGGACGCAGGGAGTCTGGCTAGC...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGACTCCAGGGCAGCTCTaGCGAGCAACCTTTCCTATT +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKTPGQL*RATFPI
Trigger: AATAGGAAAGGTTGCTCGGCAGAGCTGCCCTGGAGT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCGGCCTCAATTTGCTCTaGACATTTCGTACATTAACG +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTGLNLL*TFRTLT
Trigger: CGTTAATGTACGAAATGTGCAGAGCAAATTGAGGCC...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCCAGTTGGCCTCAATTTaGTCTGCACATTTCGTACAT +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTQLASI*SAHFVH
Trigger: ATGTACGAAATGTGCAGAGCAAATTGAGGCCAACTG...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGATTCCTGCCAGGAGTTaGAACGATGCCCTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKIPARS*NDALRG
Trigger: ACCTCTGAGGGCATCGTTCCAACTCCTGGCAGGAAT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGTTGTGCTCACTTCCGTaGAGGTGTTCAGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKLCSLP*RCSVAP
Trigger: AGGTGCCACTGAACACCTCCACGGAAGTGAGCACAA...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATAGCAGCACTACTCTCTaGGGGGCTCTGACTTGCGGC +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNSSTTL*GALTCG
Trigger: GCCGCAAGTCAGAGCCCCCCAGAGAGTAGTGCTGCT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTTTGAGCTGTGGATACTaGAAGGGCTCTGCGATCTGC +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLLSCGY*KGSAIC
Trigger: GCAGATCGCAGAGCCCTTCCAGTATCCACAGCTCAA...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTCCGAGGGCGTGGTGTaGTCCTTCAGAGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTSEGVV*SFRGPG
Trigger: GCCAGGACCTCTGAAGGACCACACCACGCCCTCGGA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACAGGGCACGCTGGCCGTaGGGTCCAGGATCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDRARWP*GPGSCR
Trigger: TCGACAAGATCCTGGACCCCACGGCCAGCGTGCCCT...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCAGTTCCACCGAGGATaGTGTCTGCACATCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFQFHRG*CLHIGW
Trigger: CCAGCCGATGTGCAGACACCATCCTCGGTGGAACTG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTGTTGGCCGTCTGGGCTaGGCTGTAGAAGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCVGRLG*AVEGPP
Trigger: TGGGGGTCCTTCTACAGCCCAGCCCAGACGGCCAAC...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTACTGCAGGGATTGTTaGCCGTCTGGGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFYCRDC*PSGLGC
Trigger: ACAGCCCAGCCCAGACGGCCAACAATCCCTGCAGTA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGGGATCTGGGAGCCTGTaGTACCCCCGACAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMGSGSL*YPRQAE
Trigger: CTCGGCCTGTCGGGGGTACCACAGGCTCCCAGATCC...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGCTTCCGTGGAGCTGGTaGGGTAACCCAGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMLPWSW*GNPAQG
Trigger: GCCCTGGGCTGGGTTACCCCACCAGCTCCACGGAAG...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGGAGGAGTGGCCAGGCTaGAGGTCTTCCGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMEEWPG*RSSVEL
Trigger: CAGCTCCACGGAAGACCTCCAGCCTGGCCACTCCTC...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCAGAGAGGCCGAGGAGTaGCCAGGCTGGAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAREAEE*PGWRSS
Trigger: GGAAGACCTCCAGCCTGGCCACTCCTCGGCCTCTCT...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACACGGTGCCTGGGAGGTaGCGGGGGAGGTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDTVPGR*RGRSVL
Trigger: AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGT...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGCACAACTACGGTGCCTaGGAGGTGGCGGGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMHNYGA*EVAGEV
Trigger: GACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTG...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCAGAACTTGCTGAGGTaGAGGCACAGTGCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAQNLLR*RHSAGR
Trigger: GCGGCCTGCACTGTGCCTTCACCTCAGCAAGTTCTG...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCAAGAGATGGAGCCGCTaGGTTCCAGCGGGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAKRWSR*VPAGVL
Trigger: CAACACCCCCGCTGGAACTCAGCGGCTCCATCTCTT...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGAGGCATCGGGGACTGTaGTATCACAAACATATGGCG +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKRHRGL*YHKHMA
Trigger: CGCCATATGTTTGTGATATCACAGTCCCCGATGCCT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCCAGTGGCAGCACCGGTaGTGGTTGTGCTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTQWQHR*WLCSLP
Trigger: CGGAAGTGAGCACAACCAGCACCGGTGCTGCCACTG...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCAAGGGCTCTGCGATCTaGAGCACTGGGTATCCCAGA +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFKGSAI*STGYPR
Trigger: TCTGGGATACCCAGTGCTGCAGATCGCAGAGCCCTT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCCGGCGTCTTATCTCCTaGGTCCCTCTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCRRLIS*VPLAGL
Trigger: GAGTCCAGCGAGAGGGACGCAGGAGATAAGACGCCG...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACCGGCGTCTTATCTCCTaGGTCCCTCTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDRRLIS*VPLAGL
Trigger: GAGTCCAGCGAGAGGGACGCAGGAGATAAGACGCCG...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTGCGCTGGACGGGAGGTaGCGGGATCGGCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPALDGR*RDRLHG
Trigger: GCCATGCAGCCGATCCCGGCACCTCCCGTCCAGCGC...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGCAGGCGGATCTTGTTaGGATGGTGCTCGATCTCAG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFAGGSC*DGARSQ
Trigger: CTGAGATCGAGCACCATCGCAACAAGATCCGCCTGC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTTCTGCATCTGTGCCCTaGGGTACACCCGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCSASVP*GTPGVA
Trigger: AGCGACACCGGGTGTACCGCAGGGCACAGATGCAGA...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATACCGAGGATGGTGTCTaGACATCGGCTGGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNTEDGV*TSAGRS
Trigger: TGACCTCCCAGCCGATGTGCAGACACCATCCTCGGT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGGAAGGGGTGCTGTTTaGGGGCAGGCCGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRGRGAV*GQAGWD
Trigger: GTCCCACCCGGCCTGCCCGCAAACAGCACCCCTTCC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTACCCTCTTTCTGCAATaGTCAAAGGAGGTTACCATT +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPTLFLQ*SKEVTI
Trigger: AATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGT...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACGGTGATCCGGGGGCCTaGTCACACCACACCATAACC +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDGDPGA*SHHTIT
Trigger: GGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACC...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCGGTGATCCGGGGGCCTaGTCACACCACACCATAACC +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTGDPGA*SHHTIT
Trigger: GGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACC...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGCCCTGGTCGTTTCCTTaGTGCATGACTGCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKPWSFP*CMTAKA
Trigger: TGCTTTTGCAGTCATGCAGCAAGGAAACGACCAGGG...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATCCTTCACCCGTGCTTTaGCTCACAGTCCGCATGCCA +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNPSPVL*LTVRMP
Trigger: TGGCATGCGGACTGTGAGGCAAAGCACGGGTGAAGG...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGTCCTCCTTCCCCTGTaGCCAAAACGTTACCCAGCT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFVLLPL*PKRYPA
Trigger: AGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGAC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCCCTGCGTCCCAGAGATaGTCCGGAGGAGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTPASQR*SGGGQS
Trigger: ACTTTGCCCTCCTCCGGAGCATCTCTGGGACGCAGG...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCCTGCGTCCCAGAGATaGTCCGGAGGAGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMPASQR*SGGGQS
Trigger: ACTTTGCCCTCCTCCGGAGCATCTCTGGGACGCAGG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGGCCTCAATTTGCTCTaGACATTTCGTACATTAACG +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPGLNLL*TFRTLT
Trigger: CGTTAATGTACGAAATGTGCAGAGCAAATTGAGGCC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGTGGAGAAACCATCCGTaGAGTGGTCCAGTGAGTATC +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKWRNHP*SGPVSI
Trigger: GATACTCACTGGACCACTCCACGGATGGTTTCTCCA...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAACAGAGAGGCGGCCGTaGGCAGGGGGAACCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQETERRP*AGGTCV
Trigger: CACACAGGTTCCCCCTGCCCACGGCCGCCTCTCTGT...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTGGCAGCACCGGTGCTaGTTGTGCTCACTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCWQHRC*LCSLPW
Trigger: CCACGGAAGTGAGCACAACCAGCACCGGTGCTGCCA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAACGAGGGGACCACCAGTaGCAGCACCGGTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQERGDHQ*QHRCWL
Trigger: CAACCAGCACCGGTGCTGCCACTGGTGGTCCCCTCG...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGCGTCACCCATCAGGGTaGAGTCGAGGGGACCACCAG +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKRHPSG*SRGDHQ
Trigger: CTGGTGGTCCCCTCGACTCCACCCTGATGGGTGACG...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCAGCAGCACTACTCTCTaGGGGGCTCTGACTTGCGGC +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTSSTTL*GALTCG
Trigger: GCCGCAAGTCAGAGCCCCCCAGAGAGTAGTGCTGCT...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAACACGGGACGCAGGGATaGCAGGGGAGGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEHGTQG*QGRSST
Trigger: AGTGCTGCTCCTCCCCTGCCATCCCTGCGTCCCGTG...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATCCCGAACTGGGCAGTaGTGGCCCGCTCTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRSRTGQ*WPALRS
Trigger: GCTCCGCAGAGCGGGCCACCACTGCCCAGTTCGGGA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAAGTGCCCGCGGCGCTTaGCGCGCAGGCGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRSARGA*RAGGSC
Trigger: ACAAGATCCGCCTGCGCGCCAAGCGCCGCGGGCACT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAACACGGAGGGCACGCTaGCCGTGGGGTCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQETRRAR*PWGPGS
Trigger: AGATCCTGGACCCCACGGCCAGCGTGCCCTCCGTGT...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTCCTCGATGGACGGCTaGGGTGGGATGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCSSMDG*GGMYWE
Trigger: CTCCCAGTACATCCCACCCCAGCCGTCCATCGAGGA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCGCCAAAACCTGGTCTTaGCAATGGACCCGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAAKTWS*QWTRRG
Trigger: CCCCCGACGGGTCCATTGCCAAGACCAGGTTTTGGC...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGACGGTGCTCTGTTTCTaGGAGAGCCGGAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMTVLCF*ESRRSS
Trigger: GGAGCTCCTCCGGCTCTCCCAGAAACAGAGCACCGT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTTTGCCTCCCCCACACTaGAGTACTTCCTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLLPPPH*STSSVD
Trigger: ATCTACAGAGGAAGTACTCCAGTGTGGGGGAGGCAA...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTACAAAGGATATGGCGTaGCCAAACGGCTGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLTKDMA*PNGCLR
Trigger: TCTCAAGCAGCCGTTTGGCCACGCCATATCCTTTGT...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTCTGAAACAAGTCCTCTaGTGCTTAGAGCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPLKQVL*CLEQLN
Trigger: ATTCAGTTGCTCTAAGCACCAGAGGACTTGTTTCAG...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAACAGACGGCGGGGCTGTaGCATGGAGAGGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEQTAGL*HGEDCC
Trigger: ACAGCAGTCCTCTCCATGTCACAGCCCCGCCGTCTG...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACGAGAATGTGTCCTGCTaGATGCAAGGGCTGCGTGCG +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDENVSC*MQGLRA
Trigger: CGCACGCAGCCCTTGCATTCAGCAGGACACATTCTC...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGGAGAATGTGTCCTGCTaGATGCAAGGGCTGCGTGCG +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMENVSC*MQGLRA
Trigger: CGCACGCAGCCCTTGCATTCAGCAGGACACATTCTC...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGCAGAACTTGCTGAGGTaGAGGCACAGTGCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKQNLLR*RHSAGR
Trigger: GCGGCCTGCACTGTGCCTTCACCTCAGCAAGTTCTG...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCGTGGCCAGAACTTGCTaGGGTGAAGGCACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTVARTC*GEGTVQ
Trigger: CTGCACTGTGCCTTCACCTCAGCAAGTTCTGGCCAC...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCCTCGGCACCATCCCCTaGTCCCACGTCTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTLGTIP*SHVFLH
Trigger: ATGGAGAAAGACGTGGGATCAGGGGATGGTGCCGAG...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGAGCAGTAGGATCAAGTaGCGCCGGCACAGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKSSRIK*RRHREA
Trigger: CGCCTCTCTGTGCCGGCGTCACTTGATCCTACTGCT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTAAACACTCGGGTCTCTaGCGGCAAGCGACGGTGTGT +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCKHSGL*RQATVC
Trigger: ACACACCGTCGCTTGCCGTCAGAGACCCGAGTGTTT...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACCTGTTGCTTCGAGAGTaGAGGCAGTCACGGGACGCA +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDLLLRE*RQSRDA
Trigger: TGCGTCCCGTGACTGCCTTCACTCTCGAAGCAACAG...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGTTCCACTGCACGGTTaGAGTGAATCCTCAGTACTT +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLVPLHG*SESSVL
Trigger: AAGTACTGAGGATTCACTTCAACCGTGCAGTGGAAC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATCCACACTCAAGTTTCTaGGCAGCTCGCTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNPHSSF*AARSLP
Trigger: CGGAAGTGAGCGAGCTGCTCAGAAACTTGAGTGTGG...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGTCTTCCTGGGCTCTATaGACACGGAGGGCACGCTGG +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKSSWAL*TRRARW
Trigger: CCAGCGTGCCCTCCGTGTTCATAGAGCCCAGGAAGA...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGTCAGAGGTGCCCAGATaGAAACTGGCTACATCTTAC +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKSEVPR*KLATSY
Trigger: GTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGA...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCTGAGCGGAACTGGGTaGGAAGGGGCCATTTATCCC +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCLSGTG*EGAIYP
Trigger: GGGATAAATGGCCCCTTCTCACCCAGTTCCGCTCAG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCAAGCCTGTATGGCCCTaGGCGGAACTGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCKPVWP*AELGEK
Trigger: CTTCTCACCCAGTTCCGCTCAGGGCCATACAGGCTT...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTAAGCCTGTATGGCCCTaGGCGGAACTGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCKPVWP*AELGEK
Trigger: CTTCTCACCCAGTTCCGCTCAGGGCCATACAGGCTT...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGGTGAAAACTCCACTTaGGCTAAAGTTAGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLGENST*AKVSVG
Trigger: TCCCACGCTAACTTTAGCTCAAGTGGAGTTTTCACC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACGGCGGACTCAGCATATaGCGCTGGTTGTCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDGGLSI*RWLSRC
Trigger: ACAACGCGACAACCAGCGGCATATGCTGAGTCCGCC...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCACCGGTGCTGGTTGTaGTCACTTCCGTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCHRCWL*SLPWRC
Trigger: ACACCTCCACGGAAGTGAGCACAACCAGCACCGGTG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGTCGATCTGCATCTGTaGCCTGCGGTACACCCGGTG +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKVDLHL*PAVHPV
Trigger: CACCGGGTGTACCGCAGGGCACAGATGCAGATCGAC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACACCGAGGATGGTGTCTaGACATCGGCTGGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDTEDGV*TSAGRS
Trigger: TGACCTCCCAGCCGATGTGCAGACACCATCCTCGGT...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATGATACTTGGCAAATCTaGGAGGCGAGGCCGATCAGC +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNDTWQI*EARPIS
Trigger: GCTGATCGGCCTCGCCTCGCAGATTTGCCAAGTATC...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGAAGTGTTCAGACAATTaGCAGCCCAGTGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKKCSDN*QPSERL
Trigger: GAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACCCTTCACCCGTGCTTTaGCTCACAGTCCGCATGCCA +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDPSPVL*LTVRMP
Trigger: TGGCATGCGGACTGTGAGGCAAAGCACGGGTGAAGG...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTTTCACATGCTCTGTCTaGCGGTACAGAAGTGGACTT +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLFTCSV*RYRSGL
Trigger: AAGTCCACTTCTGTACCGGCAGACAGAGCATGTGAA...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACAGAGGACTGCTGTGCTaGGAGCCGGGAGCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDRGLLC*EPGAVS
Trigger: AGAAACTGCTCCCGGCTCCCAGCACAGCAGTCCTCT...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGTCTAGAGCACTGATTTaGTCGTCAGGAGGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKSRALI*SSGGVR
Trigger: TCTGACACCTCCTGACGACCAAATCAGTGCTCTAGA...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACCGTGGAGGTGTTCAGTaGCACCTCTGTGGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDRGGVQ*HLCGCE
Trigger: CTCACACCCACAGAGGTGCCACTGAACACCTCCACG...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGTTTCCGGCGAGGCTTaGGAGAACGTTTTATCCGTG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFVSGEA*ENVLSV
Trigger: CACGGATAAAACGTTCTCCCAAGCCTCGCCGGAAAC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGGACAGCCGTTGACCTaGTGTTTCCGGCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKGQPLT*CFRRGL
Trigger: CAAGCCTCGCCGGAAACACCAGGTCAACGGCTGTCC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGAGGGAGTGCATGGTCTaGCGTGCCTCCTCGATGGAC +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKRECMV*RASSMD
Trigger: GTCCATCGAGGAGGCACGCCAGACCATGCACTCCCT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAGTTGGCCGTCTGGGCTaGGCTGTAGAAGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEVGRLG*AVEGPP
Trigger: TGGGGGTCCTTCTACAGCCCAGCCCAGACGGCCAAC...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGTACTGCAGGGATTGTTaGCCGTCTGGGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMYCRDC*PSGLGC
Trigger: ACAGCCCAGCCCAGACGGCCAACAATCCCTGCAGTA...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCACCGGGGCCAAAACCTaGTCTTGGCAATGGACCCGT +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCTGAKT*SWQWTR
Trigger: ACGGGTCCATTGCCAAGACCAGGTTTTGGCCCCGGT...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAGGTCTTCCGTGGAGCTaGTGGGGTAACCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEGLPWS*WGNPAQ
Trigger: CTGGGCTGGGTTACCCCACCAGCTCCACGGAAGACC...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAGAGGAGTGGCCAGGCTaGAGGTCTTCCGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEEEWPG*RSSVEL
Trigger: CAGCTCCACGGAAGACCTCCAGCCTGGCCACTCCTC...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATCTGGCAAAACTGTTGTaGCAGGCGTCGAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNLAKLL*QASRGS
Trigger: GCTTCCTCTCGACGCCTGCCACAACAGTTTTGCCAG...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGTCTGAGTTTGGTGACTaGCAAAACTGTTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKSEFGD*QNCCGR
Trigger: CCTGCCACAACAGTTTTGCCAGTCACCAAACTCAGA...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGTCTGCTGGGTTATTTaGTGCCAGAGACACCAGAAA +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKVCWVI*CQRHQK
Trigger: TTTCTGGTGTCTCTGGCACCAAATAACCCAGCAGAC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCTCCACGCCATTTGCCTaGGTAGCTGCCCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTSTPFA*VAALPS
Trigger: TGAAGGCAGGGCAGCTACCCAGGCAAATGGCGTGGA...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGAAAAGGAAGGATCCTaGATAATTATCTACCCTGTG +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPEKEGS*IIIYPV
Trigger: CACAGGGTAGATAATTATCCAGGATCCTTCCTTTTC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATCCATCTCATCGTCATTaGCGGCCACCTCTTTACTCG +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNPSHRH*RPPLYS
Trigger: CGAGTAAAGAGGTGGCCGTCAATGACGATGAGATGG...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCGTGGAGTGGTCCAGTaGGTATCTGGCAGAAAGTTA +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFRGVVQ*VSGRKL
Trigger: TAACTTTCTGCCAGATACTCACTGGACCACTCCACG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCGAAAGGTGTGGAAATaGCTGGCGGACTCAGCATAT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFRKVWK*LADSAY
Trigger: ATATGCTGAGTCCGCCAGTCATTTCCACACCTTTCG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCAGGACCGGGGAGGGCTaGATTGCTATGCAATTCGGA +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTRTGEG*IAMQFG
Trigger: TCCGAATTGCATAGCAATTCAGCCCTCCCCGGTCCT...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGCTCGGCACCATCCCCTaGTCCCACGTCTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMLGTIP*SHVFLH
Trigger: ATGGAGAAAGACGTGGGATCAGGGGATGGTGCCGAG...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGGACCGTCTAGAGCACTaGTTTGGTCGTCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMDRLEH*FGRQEV
Trigger: CACCTCCTGACGACCAAATCAGTGCTCTAGACGGTC...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCGCCAGGACAGACACGTaGCCGTCTAGAGCACTGATT +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTARTDT*PSRALI
Trigger: AATCAGTGCTCTAGACGGTCACGTGTCTGTCCTGGC...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGCTGTTGCTTCGAGAGTaGAGGCAGTCACGGGACGCA +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKLLLRE*RQSRDA
Trigger: TGCGTCCCGTGACTGCCTTCACTCTCGAAGCAACAG...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCTGGCCAGCACAGTTGTaGTCAGATAGGCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAWPAQL*SDRHRG
Trigger: TCCCCGATGCCTATCTGATCACAACTGTGCTGGCCA...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACCCACACTCAAGTTTCTaGGCAGCTCGCTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDPHSSF*AARSLP
Trigger: CGGAAGTGAGCGAGCTGCTCAGAAACTTGAGTGTGG...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCGGCAGGACAGCCGTTaGCCTGGTGTTTCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPRQDSR*PGVSGE
Trigger: CTCGCCGGAAACACCAGGTCAACGGCTGTCCTGCCG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATCAATTGCCAGCCCAGTaGAAGGCTCATGAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNQLPAQ*KAHELS
Trigger: TGACAGCTCATGAGCCTTTCACTGGGCTGGCAATTG...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGAGGAAGAATGCGGGTaGTGGCTTTGTTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFEEECG*WLCLES
Trigger: TGACTCCAAACAAAGCCATCACCCGCATTCTTCCTC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCGCTCCTTGGAGCCTCTaGGGATCGCCTGATAAGATG +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCAPWSL*GSPDKM
Trigger: CATCTTATCAGGCGATCCTCAGAGGCTCCAAGGAGC...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCCAGCAGAGGGCTGGTaGTCCGGGGGCCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHPAEGW*SGGLLT
Trigger: TGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCGTGAACTTAATGTCTaGAGACCGCTAGGGTACGGT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFRELNV*RPLGYG
Trigger: ACCGTACCCTAGCGGTCTTCAGACATTAAGTTCACG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCCAGCGCTGTGCCCAGTaGTTTTCTTCAGCACGAGCT +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCQRCAQ*FSSARA
Trigger: AGCTCGTGCTGAAGAAAAGCACTGGGCACAGCGCTG...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATTGTCGCGTTGTGTTCTaGCAGCCCGATGTCACTTCT +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNCRVVF*QPDVTS
Trigger: AGAAGTGACATCGGGCTGGCAGAACACAACGCGACA...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGGCGGACTCAGCATATaGCGCTGGTTGTCGCGTTGT +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKGGLSI*RWLSRC
Trigger: ACAACGCGACAACCAGCGGCATATGCTGAGTCCGCC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCGATGCCCTCAGAGGTaGGAAAAGCTGACCGAAAGG +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCRCPQR*EKLTER
Trigger: CCTTTCGGTCAGCTTTTCGCACCTCTGAGGGCATCG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCGATGCCCTCAGAGGTaGGAAAAGCTGACCGAAAGG +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMRCPQR*EKLTER
Trigger: CCTTTCGGTCAGCTTTTCGCACCTCTGAGGGCATCG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGAATGCAAGGGCTGCGTaGGATGCAGTCACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKNARAA*DAVTVG
Trigger: CCCCACTGTGACTGCATCGCACGCAGCCCTTGCATT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGAATGCAAGGGCTGCGTaGGATGCAGTCACAGTGGGG +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMNARAA*DAVTVG
Trigger: CCCCACTGTGACTGCATCGCACGCAGCCCTTGCATT...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTGCTGAATGCAAGGGCTaGGTGCGATGCAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCAECKG*VRCSHS
Trigger: ACTGTGACTGCATCGCACGCAGCCCTTGCATTCAGC...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGCACCTCTGGGTTTATaGTCAGAAAAACTGGAACGT +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKAPLGL*SEKLER
Trigger: ACGTTCCAGTTTTTCTGAGCATAAACCCAGAGGTGC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGCACCTCTGGGTTTATaGTCAGAAAAACTGGAACGT +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLAPLGL*SEKLER
Trigger: ACGTTCCAGTTTTTCTGAGCATAAACCCAGAGGTGC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCACCAGTGCAGTGACTaGGGATTCATGGGAAATGAG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFHQCSD*GFMGNE
Trigger: CTCATTTCCCATGAATCCGCAGTCACTGCACTGGTG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGTAATGATGTACTCCTaGACAGCTCTTCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFVMMYS*TALLAS
Trigger: GCTGGCCAGAAGAGCTGTGCAGGAGTACATCATTAC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGAGTGGTGGCCCGCTCTaGGGAGCTCTGTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMSGGPL*GALWDL
Trigger: CAGGTCCCACAGAGCTCCGCAGAGCGGGCCACCACT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCGAGGCTGATGAGTGCTaGTCATTTCCCGAACTGGGC +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAEADEC*SFPELG
Trigger: GCCCAGTTCGGGAAATGAGCAGCACTCATCAGCCTC...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCATACTGGCTGCCTCTaGTTGGCGGGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCHTGCL*LAGFPL
Trigger: CAGTGGAAATCCCGCCAAGCAGAGGCAGCCAGTATG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCGGAAGTTCTGCACGGTaGTCTGTTTCTGGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTGSSAR*SVSGRA
Trigger: GGCTCTCCCAGAAACAGAGCACCGTGCAGAACTTCC...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATCAGCTGTGGAAGTTCTaGACGGTGCTCTGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNQLWKF*TVLCFW
Trigger: CCAGAAACAGAGCACCGTGCAGAACTTCCACAGCTG...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACGATACTTGGCAAATCTaGGAGGCGAGGCCGATCAGC +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDDTWQI*EARPIS
Trigger: GCTGATCGGCCTCGCCTCGCAGATTTGCCAAGTATC...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGCCCATCATTAAGCGATaGATGACTGTCTTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKPIIKR*MTVFAD
Trigger: ATCAGCGAAGACAGTCATGCATCGCTTAATGATGGG...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGATCGCCTGATAAGATaGTGCTGGTCCTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKDRLIR*CWSFVE
Trigger: TTCAACAAAGGACCAGCAGCATCTTATCAGGCGATC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACGTAGAGACGGGGTTTTaGCATGTTGCCTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDVETGF*HVAWAG
Trigger: ACCAGCCCAGGCAACATGGCAAAACCCCGTCTCTAC...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGTGTTTTGTGTTCACATaGTCTGTCTGCCGGTACAGA +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKCFVFT*SVCRYR
Trigger: TCTGTACCGGCAGACAGAGCATGTGAACACAAAACA...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGGGACTACTGGCACATaGCACCATGCTCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFGTTGT*HHAQLI
Trigger: AATTAGCTGAGCATGGTGGCATGTGCCAGTAGTCCC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGCTAGCCAGACTCCCTaGGTCCCAGAGATGCTCCGG +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRASQTP*VPEMLR
Trigger: CCGGAGCATCTCTGGGACGCAGGGAGTCTGGCTAGC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTTCCCTGGGCAGCCCTaGTGGGCTGACTGTGATATA +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTFPGQP*WADCDI
Trigger: TATATCACAGTCAGCCCACCAGGGCTGCCCAGGGAA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGCGTGGAGGTGTTCAGTaGCACCTCTGTGGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMRGGVQ*HLCGCE
Trigger: CTCACACCCACAGAGGTGCCACTGAACACCTCCACG...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCCACAAGTTGTTGCTCTaGGATTCCGGAGACGGCCTC +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTHKLLL*DSGDGL
Trigger: GAGGCCGTCTCCGGAATCCCAGAGCAACAACTTGTG...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACCACAAGTTGTTGCTCTaGGATTCCGGAGACGGCCTC +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDHKLLL*DSGDGL
Trigger: GAGGCCGTCTCCGGAATCCCAGAGCAACAACTTGTG...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCATTTTCCGAGGGCGTaGTGTGGTCCTTCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMHFPRA*CGPSEV
Trigger: GACCTCTGAAGGACCACACCACGCCCTCGGAAAATG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCCATTTTCCGAGGGCGTaGTGTGGTCCTTCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTHFPRA*CGPSEV
Trigger: GACCTCTGAAGGACCACACCACGCCCTCGGAAAATG...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCAAGGGATCTTTGACTTaGGGCTTGGCACGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFKGSLT*GLARLH
Trigger: ATGGAGACGTGCCAAGCCCCAAGTCAAAGATCCCTT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCTGCATGGCGATAAGCTaGATCTTACTGGGGACCCGC +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGACMAIS*ILLGTR
Trigger: GCGGGTCCCCAGTAAGATCCAGCTTATCGCCATGCA...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTTGCATGGCGATAAGCTaGATCTTACTGGGGACCCGC +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCCMAIS*ILLGTR
Trigger: GCGGGTCCCCAGTAAGATCCAGCTTATCGCCATGCA...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGACCTGGTCTTGGCAATaGACCCGTCGGGGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMTWSWQ*TRRGSH
Trigger: ATGACTCCCCCGACGGGTCCATTGCCAAGACCAGGT...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCCAGGAAGCGGATACTTaGCAAATCTGCGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTQEADT*QICEAR
Trigger: CCTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTG...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCCTACAACCTATCATTTaGTTTCTCACTAGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: HQQRAGDPGACSHHTITTLQPII*FLTSSF
Trigger: AAAGCTACTAGTGAGAAACCAAATGATAGGTTGTAG...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGGTGATGGCTTTGTTTaGAGTCATCAGGCTCTACAA +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKGDGFV*SHQALQ
Trigger: TTGTAGAGCCTGATGACTCCAAACAAAGCCATCACC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGTTATCGTGCCTCAGCTaGGACTACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMLSCLS*DYRHAP
Trigger: TGGCGCATGCCTGTAGTCCCAGCTGAGGCACGATAA...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTACATGCAACTTCTTCTaGGTGCCTAATTCATTTATG +
Preference number: 4 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPTCNFF*VPNSFM
Trigger: CATAAATGAATTAGGCACCCAGAAGAAGTTGCATGT...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGATGCCAGGAAAGATCTaGCCGGCAAACACCCACTGC +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMMPGKI*PANTHC
Trigger: GCAGTGGGTGTTTGCCGGCCAGATCTTTCCTGGCAT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCTGCCGGTACAGAAGTaGACTTCCTCCTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCLPVQK*TSSCSC
Trigger: ACAGGAGCAGGAGGAAGTCCACTTCTGTACCGGCAG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCCTGCCGGTACAGAAGTaGACTTCCTCCTGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTLPVQK*TSSCSC
Trigger: ACAGGAGCAGGAGGAAGTCCACTTCTGTACCGGCAG...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGAGGACCGGGGAGGGCTaGATTGCTATGCAATTCGGA +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMRTGEG*IAMQFG
Trigger: TCCGAATTGCATAGCAATTCAGCCCTCCCCGGTCCT...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGAACAAACGAGGATCCTaGTGGCAGGTACGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMNKRGS*WQVRVS
Trigger: ACTGACGCGTACCTGCCATCAGGATCCTCGTTTGTT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATGCACCTCTGTGGGTGTaGGTGATGGGCCCACGACGG +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHAPLWV*VMGPRR
Trigger: CCGTCGTGGGCCCATCACTCACACCCACAGAGGTGC...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATTCTCAATGCGCTGGGTaGAGTTGCAGAAGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNSQCAG*SCRSQY
Trigger: ATACTGGCTTCTGCAACTTCACCCAGCGCATTGAGA...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGAGGACTTCAGCAACTaGGATAAGTTGAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFEDFSN*DKLSCG
Trigger: TCCACAGCTCAACTTATCTCAGTTGCTGAAGTCCTC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCCCAGGAGAACTGTTCTaGCCCAAGAGGACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTPGELF*PKRTSA
Trigger: TGCTGAAGTCCTCTTGGGTCAGAACAGTTCTCCTGG...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCCCAGGAGAACTGTTCTaGCCCAAGAGGACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTPGELF*PKRTSA
Trigger: TGCTGAAGTCCTCTTGGGTCAGAACAGTTCTCCTGG...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGGGAGTTGCTTCTCCATaGCGCCCAGGAGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMGVASP*RPGELF
Trigger: GAACAGTTCTCCTGGGCGTCATGGAGAAGCAACTCC...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCTTCGGTAACCCAAGATaGTGGCTGCTCTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTFGNPR*WLLSGG
Trigger: ACCTCCAGAGAGCAGCCATCATCTTGGGTTACCGAA...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCGCCACAGTGTCAGGCTaGAAGTCTAGCTTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTATVSG*KSSLSV
Trigger: CACAGACAAGCTAGACTTTCAGCCTGACACTGTGGC...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTAAACACCCACTCAGTTaGTTTCCTTTTGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLKHPLS*FPFGLA
Trigger: AGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTT...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCCCAGTGAAAGGCTCATaGGCTGTCACACGACGTATG +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCPVKGS*AVTRRM
Trigger: CATACGTCGTGTGACAGCTCATGAGCCTTTCACTGG...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGACAGAGAGGCTGAACTaGACTCAATTTCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKTERLN*TQFHFQ
Trigger: CTGGAAATGAAATTGAGTTCAGTTCAGCCTCTCTGT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGGCTTATGGGGAGAATaGAGTTCAGAGAAGGAACCA +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFGLWGE*SSEKEP
Trigger: TGGTTCCTTCTCTGAACTTCATTCTCCCCATAAGCC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATGTGAGCCACCGCGCCTaGTCTCTTCGAATGAATTTT +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNVSHRA*SLRMNF
Trigger: AAAATTCATTCGAAGAGATCAGGCGCGGTGGCTCAC...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCCCCACTCCCCTTTTCTaGAACAAGTCCTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTPTPLF*NKSSGA
Trigger: AGCACCAGAGGACTTGTTTCAGAAAAGGGGAGTGGG...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGTATAAAGAAAGGTTGTaGTGTTCCGGAGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKYKERL*CSGESS
Trigger: TGAGCTCTCTCCGGAACAGCACAACCTTTCTTTATA...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGCAGCGCTGTGCCCAGTaGTTTTCTTCAGCACGAGCT +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKQRCAQ*FSSARA
Trigger: AGCTCGTGCTGAAGAAAAGCACTGGGCACAGCGCTG...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGACTTGTGCAGCGCTGTaGCCAGTGCTTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMTCAAL*PVLFFS
Trigger: GCTGAAGAAAAGCACTGGGCACAGCGCTGCACAAGT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCTGTCGCGTTGTGTTCTaGCAGCCCGATGTCACTTCT +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGACRVVF*QPDVTS
Trigger: AGAAGTGACATCGGGCTGGCAGAACACAACGCGACA...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGAAGGGCTGCGTGCGATaGAGTCACAGTGGGGTATGT +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKKGCVR*SHSGVC
Trigger: ACATACCCCACTGTGACTGCATCGCACGCAGCCCTT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGAAGGGCTGCGTGCGATaGAGTCACAGTGGGGTATGT +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMKGCVR*SHSGVC
Trigger: ACATACCCCACTGTGACTGCATCGCACGCAGCCCTT...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGCTGAATGCAAGGGCTaGGTGCGATGCAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKAECKG*VRCSHS
Trigger: ACTGTGACTGCATCGCACGCAGCCCTTGCATTCAGC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGATGTGTCCTGCTGAATaGAAGGGCTGCGTGCGATGC +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKMCPAE*KGCVRC
Trigger: GCATCGCACGCAGCCCTTGCATTCAGCAGGACACAT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAGAGGTGAAGGCACAGTaGAGGCCGCACACCAAGTGT +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEEVKAQ*RPHTKC
Trigger: ACACTTGGTGTGCGGCCTGCACTGTGCCTTCACCTC...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGCACCACACTGTTCCCTaGAGCTACAGTGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMHHTVP*SYSGPS
Trigger: AGAAGGGCCACTGTAGCTGCAGGGAACAGTGTGGTG...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTAGGATCTTGTCGATCTaGATCTGTGCCCTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCRILSI*ICALRY
Trigger: GTACCGCAGGGCACAGATGCAGATCGACAAGATCCT...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGTGCATGGTCTGGCGTaGCTCCTCGATGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMVHGLA*LLDGRL
Trigger: CAGCCGTCCATCGAGGAGGCACGCCAGACCATGCAC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCACCAGCTCTGTAGACTaGAGCAAACCGGGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTTSSVD*SKPGPK
Trigger: TTTTGGCCCCGGTTTGCTGCAGTCTACAGAGCTGGT...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGACCCACCTGTGTCAGGTaGTGGATCTGGGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRPTCVR*WIWEPV
Trigger: CACAGGCTCCCAGATCCAGCACCTGACACAGGTGGG...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGGCTGAGCTCCAATTCTaGTGGCAATCCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMAELQF*WQSPPV
Trigger: CACAGGTGGGGATTGCCAGCAGAATTGGAGCTCAGC...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTACCAGGAGTTGTGTGTaGCCAATTAAGAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLTRSCV*PIKKQQ
Trigger: TTGCTGTTTCTTAATTGGGCACACACAACTCCTGGT...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCAAGAGGAATAGGCCATaGCACACAGCCCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAKRNRP*HTAQVC
Trigger: ACACACCTGGGCTGTGTGGCATGGCCTATTCCTCTT...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCAAGAGGAATAGGCCATaGCACACAGCCCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTKRNRP*HTAQVC
Trigger: ACACACCTGGGCTGTGTGGCATGGCCTATTCCTCTT...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGACAGAACCCTCTTTCTaGAATGCTCAAAGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKTEPSF*NAQRRL
Trigger: TAACCTCCTTTGAGCATTGCAGAAAGAGGGTTCTGT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTCCTTGCTGCATGACTaGAAAAGCATCCTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFSLLHD*KSILPA
Trigger: TGCTGGAAGGATGCTTTTGCAGTCATGCAGCAAGGA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCGCGTGGCCAAACGGCTaGTTGAGATCTGCTCTAAAC +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAAWPNG*LRSALN
Trigger: GTTTAGAGCAGATCTCAAGCAGCCGTTTGGCCACGC...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAGCCTACCTTCACCCGTaGTTTGCCTCACAGTCCGCA +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEAYLHP*FASQSA
Trigger: TGCGGACTGTGAGGCAAAGCACGGGTGAAGGTAGGC...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGAAGTGGACTTCCTCCTaGTCCTGTCCAGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMKWTSS*SCPGQM
Trigger: CATTTGCCCTGGACAGGAGCAGGAGGAAGTCCACTT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATGGGACTACTGGCACATaGCACCATGCTCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNGTTGT*HHAQLI
Trigger: AATTAGCTGAGCATGGTGGCATGTGCCAGTAGTCCC...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGACAGGACCTCACCCTaGAGCCCAGGCTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMDRTSP*SPGWSA
Trigger: TGCACTCCAGCCTGGGCTGCAGGGTGAGGTCCTGTC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGTTCCCTGGGCAGCCCTaGTGGGCTGACTGTGATATA +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMFPGQP*WADCDI
Trigger: TATATCACAGTCAGCCCACCAGGGCTGCCCAGGGAA...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCCTCAGCATATGCCGCTaGTTGTCGCGTTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCLSICR*LSRCVL
Trigger: CAGAACACAACGCGACAACCAGCGGCATATGCTGAG...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTATTCCTGCCAGGAGTTaGAACGATGCCCTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCIPARS*NDALRG
Trigger: ACCTCTGAGGGCATCGTTCCAACTCCTGGCAGGAAT...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCATCTGTCTGCACTTGTaGCCCAAACCTCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCICLHL*PKPPLE
Trigger: CTCCAGAGGAGGTTTGGGCCACAAGTGCAGACAGAT...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATAGCTCGGAACTTGGCTaGAGCTGCGAAAACTCAAGA +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNSSELG*SCENSR
Trigger: TCTTGAGTTTTCGCAGCTCCAGCCAAGTTCCGAGCT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTTGTGCTCACTTCCGTaGAGGTGTTCAGTGGCACCT +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTLCSLP*RCSVAP
Trigger: AGGTGCCACTGAACACCTCCACGGAAGTGAGCACAA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGGGCAGTAGCCAGTGTTaGTGTGTCGACTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMGSSQC*CVDCCF
Trigger: GAAGCAACAGTCGACACACCAACACTGGCTACTGCC...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTGTTTCCGGCGAGGCTTaGGAGAACGTTTTATCCGTG +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCVSGEA*ENVLSV
Trigger: CACGGATAAAACGTTCTCCCAAGCCTCGCCGGAAAC...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAGCGGTGCTGGCAGGCTaGCTGCTGGGGGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEAVLAG*LLGATR
Trigger: CCTCGTGGCCCCCAGCAGCCAGCCTGCCAGCACCGC...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAACCGAGTAGATCCCTCTaGCAGCAAATGGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEPSRSL*QQMGLR
Trigger: CCGAAGCCCCATTTGCTGCCAGAGGGATCTACTCGG...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCTGGCGGGATTTCCACTaGCTGAGCTCCAATTCTGCT +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAWRDFH*LSSNSA
Trigger: AGCAGAATTGGAGCTCAGCCAGTGGAAATCCCGCCA...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGGTCTTCCGTGGAGCTaGTGGGGTAACCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMGLPWS*WGNPAQ
Trigger: CTGGGCTGGGTTACCCCACCAGCTCCACGGAAGACC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCAAGGTGAAGGGCCCTTaGAGCTGTAGCACCAGAAGA +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTKVKGP*SCSTRR
Trigger: TCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTT...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCGATCGGTGCTGAACTaGGACATGACCAGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMRSVLN*DMTRSC
Trigger: ACAACTCCTGGTCATGTCCCAGTTCAGCACCGATCG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTACGGTGCCTGGGAGGTaGCGGGGGAGGTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPTVPGR*RGRSVL
Trigger: AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGT...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGATGCCAGGAAAGATCTaGCCGGCAAACACCCACTGC +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKMPGKI*PANTHC
Trigger: GCAGTGGGTGTTTGCCGGCCAGATCTTTCCTGGCAT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATGAGCAACTGAATGAATaGGTGGAGCCTCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNEQLNE*VEPQFL
Trigger: GAGGAACTGAGGCTCCACCCATTCATTCAGTTGCTC...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACCGTGGAGTGGTCCAGTaGGTATCTGGCAGAAAGTTA +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDRGVVQ*VSGRKL
Trigger: TAACTTTCTGCCAGATACTCACTGGACCACTCCACG...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCCGAAAGGTGTGGAAATaGCTGGCGGACTCAGCATAT +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTRKVWK*LADSAY
Trigger: ATATGCTGAGTCCGCCAGTCATTTCCACACCTTTCG...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAACCGGGCTCAGGATATaGGTGTTGTCCACAGGACCG +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRTGLRI*VLSTGP
Trigger: CGGTCCTGTGGACAACACTCATATCCTGAGCCCGGT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACTTCCAGCGGGGGTGTTaGGAAAAAGCTGGATGCAAA +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDFQRGC*EKAGCK
Trigger: TTTGCATCCAGCTTTTTCTCAACACCCCCGCTGGAA...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATAAGAGACAGCTGAGATaGCTGCAGATCACTAGAGTC +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNKRQLR*LQITRV
Trigger: GACTCTAGTGATCTGCAGTCATCTCAGCTGTCTCTT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGACAGTGGTCAATGGTaGTGTTGCTTGAATCCCGGC +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKDSGQW*CCLNPG
Trigger: GCCGGGATTCAAGCAACATCACCATTGACCACTGTC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGAACAAACGAGGATCCTaGTGGCAGGTACGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKNKRGS*WQVRVS
Trigger: ACTGACGCGTACCTGCCATCAGGATCCTCGTTTGTT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTCAAGATCTGCACCGTaGGGTTATACGTTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTSRSAP*GYTFPG
Trigger: ACCAGGGAACGTATAACCTCACGGTGCAGATCTTGA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATGAGGACTTCAGCAACTaGGATAAGTTGAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNEDFSN*DKLSCG
Trigger: TCCACAGCTCAACTTATCTCAGTTGCTGAAGTCCTC...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATCCTCCACAAAGTAGATaGGCTGTACCGGATTGTCAT +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNPPQSR*AVPDCH
Trigger: ATGACAATCCGGTACAGCTCATCTACTTTGTGGAGG...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGTTCGGTAACCCAAGATaGTGGCTGCTCTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMFGNPR*WLLSGG
Trigger: ACCTCCAGAGAGCAGCCATCATCTTGGGTTACCGAA...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGCGACAGGCTGGGCAATaGCACCTTGAATTCGGTAAC +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMRQAGQ*HLEFGN
Trigger: GTTACCGAATTCAAGGTGTCATTGCCCAGCCTGTCG...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCGTAGAGTCAGCATCTaGGGGAGAAACTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMRRVSI*GRNSSS
Trigger: AGAGGAAGAGTTTCTCCCTCAGATGCTGACTCTACG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTTCTTCCTGGGCTCTATaGACACGGAGGGCACGCTGG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPSSWAL*TRRARW
Trigger: CCAGCGTGCCCTCCGTGTTCATAGAGCCCAGGAAGA...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCCGTGAACTTAATGTCTaGAGACCGCTAGGGTACGGT +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTRELNV*RPLGYG
Trigger: ACCGTACCCTAGCGGTCTTCAGACATTAAGTTCACG...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGGACATCTGCACACATaGTCACATCTGATTCTCACA +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFGHLHT*SHLILT
Trigger: TGTGAGAATCAGATGTGATCATGTGTGCAGATGTCC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAGCTCTTGATCTCAAGTaGTCCACCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEALDLK*STCLSL
Trigger: GAGGCTGAGGCAGGTGGATCACTTGAGATCAAGAGC...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCACAGCATATGCGACTTaGACTTGGCCCTGTACTATT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFTAYAT*TWPCTI
Trigger: AATAGTACAGGGCCAAGTTCAAGTCGCATATGCTGT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGCCCACTCCCCTTTTCTaGAACAAGTCCTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMPTPLF*NKSSGA
Trigger: AGCACCAGAGGACTTGTTTCAGAAAAGGGGAGTGGG...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGAAAAACATGGACCTTaGCAAAGGAGGGAGAGACAA +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFEKHGP*QRRERQ
Trigger: TTGTCTCTCCCTCCTTTGTCAAGGTCCATGTTTTTC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCATTTCAGTGCCTGTTTaGGGACCAGCAAACCATGAT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFISVPV*GPANHD
Trigger: ATCATGGTTTGCTGGTCCTCAAACAGGCACTGAAAT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTGGAGAGGACTGCTGTaGTGGGAGCCGGGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMWRGLL*WEPGAV
Trigger: AACTGCTCCCGGCTCCCAGCACAGCAGTCCTCTCCA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCGATGACCGAGAAAAATaGAGTGGTCACGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCDDREK*SGHAGW
Trigger: CCATCCAGCGTGACCACTGCATTTTTCTCGGTCATC...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGCAGTGGCAGCACCGGTaGTGGTTGTGCTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMQWQHR*WLCSLP
Trigger: CGGAAGTGAGCACAACCAGCACCGGTGCTGCCACTG...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCTGGTGTGTCGACTGTTaGTTCGAGAGTGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTWCVDC*FESEGS
Trigger: ACTGCCTTCACTCTCGAAGCAACAGTCGACACACCA...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCGTAATGATGTACTCCTaGACAGCTCTTCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCVMMYS*TALLAS
Trigger: GCTGGCCAGAAGAGCTGTGCAGGAGTACATCATTAC...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCAACCTTCAGTTCCACTaGACGGTTGAAGTGAATCCT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFNLQFH*TVEVNP
Trigger: AGGATTCACTTCAACCGTGCAGTGGAACTGAAGGTT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAACACCACACTGTTCCCTaGAGCTACAGTGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEHHTVP*SYSGPS
Trigger: AGAAGGGCCACTGTAGCTGCAGGGAACAGTGTGGTG...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACATGGAGGCTGATGAGTaGTGCTCATTTCCCGAACTG +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDMEADE*CSFPEL
Trigger: CAGTTCGGGAAATGAGCAGCACTCATCAGCCTCCAT...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGGTGCCGGGATCGGCTaGATGGCGATAAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMGAGIG*MAISWI
Trigger: GATCCAGCTTATCGCCATGCAGCCGATCCCGGCACC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAGCGCTGGACGGGAGGTaGCGGGATCGGCTGCATGGC +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEALDGR*RDRLHG
Trigger: GCCATGCAGCCGATCCCGGCACCTCCCGTCCAGCGC...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCTCCCTTGGGCAGGCTaGCCGAGAGTTGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHLPWAG*PRVAPS
Trigger: GGAAGGAGCAACTCTCGGGCAGCCTGCCCAAGGGAG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCCCTGGTCGTTTCCTTaGTGCATGACTGCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAPWSFP*CMTAKA
Trigger: TGCTTTTGCAGTCATGCAGCAAGGAAACGACCAGGG...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCCCGGCAAACACCCACTaGTTAAAAGTCATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTPANTH*LKVICH
Trigger: GTGGCAGATGACTTTTAAGCAGTGGGTGTTTGCCGG...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCCCGGCAAACACCCACTaGTTAAAAGTCATCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCPANTH*LKVICH
Trigger: GTGGCAGATGACTTTTAAGCAGTGGGTGTTTGCCGG...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTTCTTTCCCCACATTTaGAGGAGGAACAGTACAGCA +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFFFPHI*RRNSTA
Trigger: TGCTGTACTGTTCCTCCTGCAAATGTGGGGAAAGAA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGAAACAAGTCCTCTGGTaGTTAGAGCAACTGAATGAA +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKKQVLW*LEQLNE
Trigger: TTCATTCAGTTGCTCTAAGCACCAGAGGACTTGTTT...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAACGGAGAGAGCTCATCTaGGGCGCACGAGGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHERRELI*GARGRP
Trigger: CGGCCGGCCTCGTGCGCCCCAGATGAGCTCTCTCCG...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTTGCCACAAAGATGCTaGGATCTGCTGTACTTTTGG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFLPQRC*DLLYFW
Trigger: CCAAAAGTACAGCAGATCCCAGCATCTTTGTGGCAA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCAAACCATCCGTGGAGTaGTCCAGTGAGTATCTGGCA +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCKPSVE*SSEYLA
Trigger: TGCCAGATACTCACTGGACCACTCCACGGATGGTTT...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCAAACCATCCGTGGAGTaGTCCAGTGAGTATCTGGCA +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAKPSVE*SSEYLA
Trigger: TGCCAGATACTCACTGGACCACTCCACGGATGGTTT...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTGGAGAAACCATCCGTaGAGTGGTCCAGTGAGTATC +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCWRNHP*SGPVSI
Trigger: GATACTCACTGGACCACTCCACGGATGGTTTCTCCA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGTGTGATATACTGTATTaGAGAAACCATCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKCDILY*RNHPWS
Trigger: ACTCCACGGATGGTTTCTCCAATACAGTATATCACA...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAAGGCAGCTCGGAACTTaGCTGGAGCTGCGAAAACTC +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQERQLGT*LELRKL
Trigger: GAGTTTTCGCAGCTCCAGCCAAGTTCCGAGCTGCCT...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTGGCAGCACCGGTGCTaGTTGTGCTCACTTCCGTGG +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMWQHRC*LCSLPW
Trigger: CCACGGAAGTGAGCACAACCAGCACCGGTGCTGCCA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCCTTTCTCAATGCGCTaGGTGAAGTTGCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAPFSMR*VKLQKP
Trigger: TGGCTTCTGCAACTTCACCCAGCGCATTGAGAAAGG...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGGACGCTGCTGAATGTTaGCCACAGTGTCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMDAAEC*PQCQAE
Trigger: TTCAGCCTGACACTGTGGCCAACATTCAGCAGCGTC...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGTCCTTCAGAGGTCCTaGCAGTGGCGCTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMVLQRS*QWRWLM
Trigger: CATGAGCCAGCGCCACTGCCAGGACCTCTGAAGGAC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCTCTGCGGAGCTCTGTaGGACCTGCCATCGTTGACG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPLCGAL*DLPSLT
Trigger: CGTCAACGATGGCAGGTCCCACAGAGCTCCGCAGAG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAACCACGTGCTCGAAGATaGAGGCTGATGAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEPRARR*RLMSAA
Trigger: AGCAGCACTCATCAGCCTCCATCTTCGAGCACGTGG...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATGTCTGCACATCGGCTaGGAGGTCAGGATCCGATGG +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRCLHIG*EVRIRW
Trigger: CCATCGGATCCTGACCTCCCAGCCGATGTGCAGACA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATTGGGGTGGGATGTACTaGGAGGCCGGGAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHWGGMY*EAGKGR
Trigger: CCTTCCCTTCCCGGCCTCCCAGTACATCCCACCCCA...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTCCTCGATGGACGGCTaGGGTGGGATGTACTGGGAG +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMSSMDG*GGMYWE
Trigger: CTCCCAGTACATCCCACCCCAGCCGTCCATCGAGGA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGAGCTCCAATTCTGCTaGCAATCCCCACCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKELQFC*QSPPVS
Trigger: TGACACAGGTGGGGATTGCCAGCAGAATTGGAGCTC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGTGGCGGGATTTCCACTaGCTGAGCTCCAATTCTGCT +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMWRDFH*LSSNSA
Trigger: AGCAGAATTGGAGCTCAGCCAGTGGAAATCCCGCCA...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCTGATAAGATGCTGCTaGTCCTTTGTTGAACGTCCT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFLIRCC*SFVERP
Trigger: AGGACGTTCAACAAAGGACCAGCAGCATCTTATCAG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAGCTCCACAAAGGATATaGCGTGGCCAAACGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEAPQRI*RGQTAA
Trigger: AGCAGCCGTTTGGCCACGCCATATCCTTTGTGGAGC...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCAGTGTCCGAATGACTaGCTTGGTCACTGGAACACT +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCQCPND*LGHWNT
Trigger: AGTGTTCCAGTGACCAAGCCAGTCATTCGGACACTG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCCAGTGTCCGAATGACTaGCTTGGTCACTGGAACACT +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTQCPND*LGHWNT
Trigger: AGTGTTCCAGTGACCAAGCCAGTCATTCGGACACTG...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGGAGCAACTGAATGAATaGGTGGAGCCTCAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMEQLNE*VEPQFL
Trigger: GAGGAACTGAGGCTCCACCCATTCATTCAGTTGCTC...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGAGAGGTGCGAAAAGCTaGCCGAAAGGTGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMRGAKS*PKGVEM
Trigger: CATTTCCACACCTTTCGGTCAGCTTTTCGCACCTCT...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACGCCAACACTCGTCTCTaGGATTTCCATGGATCTAGA +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDANTRL*DFHGSR
Trigger: TCTAGATCCATGGAAATCTCAGAGACGAGTGTTGGC...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGAAACACTCGGGTCTCTaGCGGCAAGCGACGGTGTGT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMKHSGL*RQATVC
Trigger: ACACACCGTCGCTTGCCGTCAGAGACCCGAGTGTTT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGTTCCAGCGGGGGTGTTaGGAAAAAGCTGGATGCAAA +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMFQRGC*EKAGCK
Trigger: TTTGCATCCAGCTTTTTCTCAACACCCCCGCTGGAA...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATACTGCACGGTTGAAGTaGATCCTCAGTACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNTARLK*ILSTSL
Trigger: CAAAGAAGTACTGAGGATTCACTTCAACCGTGCAGT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGGCAACTGAGATAAGTTaGGCTGTGGATACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMATEIS*AVDTGR
Trigger: CCTTCCAGTATCCACAGCTCAACTTATCTCAGTTGC...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCGTTCCATCTCGGCTTaGAACACTTCATTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCRSISA*NTSFWS
Trigger: ACTCCAGAATGAAGTGTTTCAAGCCGAGATGGAACG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCCCTCCACAAAGTAGATaGGCTGTACCGGATTGTCAT +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCPPQSR*AVPDCH
Trigger: ATGACAATCCGGTACAGCTCATCTACTTTGTGGAGG...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCGAAACTCTTCCTCTGTaGCGAACATTCTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTETLPL*RTFLEG
Trigger: CCCTTCCAAGAATGTTCGTCACAGAGGAAGAGTTTC...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTGAAGTCCTTGGCACCTaGAATAGCGGTGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCEVLGT*NSGEEE
Trigger: TTCTTCTTCACCGCTATTTCAGGTGCCAAGGACTTC...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422774.2
CDS-3UTR TCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGAGGAAGAATGCGGGTaGTGGCTTTGTTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKEEECG*WLCLES
Trigger: TGACTCCAAACAAAGCCATCACCCGCATTCTTCCTC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTCAGTTAGGACCTCTTaGAAGCCGCATTCTACAGGA +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTSVRTS*KPHSTG
Trigger: TCCTGTAGAATGCGGCTTTCAAGAGGTCCTAACTGA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTCATGACTGTCTTCGCTaGTCTAATAAAAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLHDCLR*SNKNRL
Trigger: TAACCTGTTTTTATTAGATCAGCGAAGACAGTCATG...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGTCAGAGGTGCCCAGATaGAAACTGGCTACATCTTAC +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMSEVPR*KLATSY
Trigger: GTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGA...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCTGCTGGTCCTTTGTTaGACGTCCTTGAGAGACTTA +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMLLVLC*TSLRDL
Trigger: TAAGTCTCTCAAGGACGTTCAACAAAGGACCAGCAG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTGCTGTCACACGATTTaGATTCATTACAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFCCHTI*IHYKVS
Trigger: GGACACCTTGTAATGAATTCAAATCGTGTGACAGCA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTACGGTCAGCCCAATTTaGAACAGAACCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCTVSPI*NRTLFL
Trigger: CAGAAAGAGGGTTCTGTTTCAAATTGGGCTGACCGT...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGCATCATCTTTGGTCTTaGCATCTGTTTAAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKHHLWS*HLFKGV
Trigger: TACACCTTTAAACAGATGTCAAGACCAAAGATGATG...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGGTGAGCCACCGCGCCTaGTCTCTTCGAATGAATTTT +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMVSHRA*SLRMNF
Trigger: AAAATTCATTCGAAGAGATCAGGCGCGGTGGCTCAC...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCAAATCAGTGTCCGAATaGCTGGCTTGGTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTKSVSE*LAWSLE
Trigger: TTCCAGTGACCAAGCCAGTCATTCGGACACTGATTT...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCTTAGAGCAACTGAATaGATGGGTGGAGCCTCAGTT +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMLRATE*MGGASV
Trigger: AACTGAGGCTCCACCCATTCATTCAGTTGCTCTAAG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCAAAGCACCAAATTCCTaGCAGGAGTTGGAACGATGC +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTKAPNS*QELERC
Trigger: GCATCGTTCCAACTCCTGGCAGGAATTTGGTGCTTT...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTATCAGTGTATCTGTCTaGACTTGTGGCCCAAACCTC +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCISVSV*TCGPNL
Trigger: GAGGTTTGGGCCACAAGTGCAGACAGATACACTGAT...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATGAACTTGGCTGGAGCTaGGAAAACTCAAGATTTGTG +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNELGWS*ENSRFV
Trigger: CACAAATCTTGAGTTTTCGCAGCTCCAGCCAAGTTC...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAAAGGGCTCTGCGATCTaGAGCACTGGGTATCCCAGA +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRKGSAI*STGYPR
Trigger: TCTGGGATACCCAGTGCTGCAGATCGCAGAGCCCTT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGACACATTTACCACCTaGACCACACTGTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKDTFTT*TTLFPA
Trigger: TGCAGGGAACAGTGTGGTGCAGGTGGTAAATGTGTC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGGACACATTTACCACCTaGACCACACTGTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMDTFTT*TTLFPA
Trigger: TGCAGGGAACAGTGTGGTGCAGGTGGTAAATGTGTC...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGGTCCGAAGACTTGACTaGACTGAGTCTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMVRRLD*TESFSI
Trigger: GATGGAGAAAGACTCAGTGCAGTCAAGTCTTCGGAC...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATGAGCTGAGGGCTCCCTaGCTGAAGTCCTTGGCACCT +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHELRAP*LKSLAP
Trigger: AGGTGCCAAGGACTTCAGGCAGGGAGCCCTCAGCTC...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422774.2
CDS-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGAGCTCCTCGCGGATTaGTTTGATGAGAGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRELLAD*FDERGR
Trigger: TCGGCCTCTCTCATCAAAGCAATCCGCGAGGAGCTC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAACAGCTGTGGAAGTTCTaGACGGTGCTCTGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEQLWKF*TVLCFW
Trigger: CCAGAAACAGAGCACCGTGCAGAACTTCCACAGCTG...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATCCCATCATTAAGCGATaGATGACTGTCTTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNPIIKR*MTVFAD
Trigger: ATCAGCGAAGACAGTCATGCATCGCTTAATGATGGG...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCGCCTGATAAGATGCTaGTGGTCCTTTGTTGAACGT +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGARLIRC*WSFVER
Trigger: ACGTTCAACAAAGGACCAGCAGCATCTTATCAGGCG...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGAAAGACATCAAAATTaGTTTTACGGTCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKERHQN*FYGQPN
Trigger: ATTGGGCTGACCGTAAAAGCAATTTTGATGTCTTTC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATTTTCACAGTGCTTTATaGTCCCTCCTCACAGGACAT +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNFHSAL*SLLTGH
Trigger: ATGTCCTGTGAGGAGGGAGCATAAAGCACTGTGAAA...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGTGCTGGGTTATTTGGTaGCAGAGACACCAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMCWVIW*QRHQKV
Trigger: GACTTTCTGGTGTCTCTGGCACCAAATAACCCAGCA...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATTCCTTCCACGCCATTTaGCTGGGTAGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHSFHAI*LGSCPA
Trigger: GGCAGGGCAGCTACCCAGGCAAATGGCGTGGAAGGA...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTCCTTGCTGCATGACTaGAAAAGCATCCTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCSLLHD*KSILPA
Trigger: TGCTGGAAGGATGCTTTTGCAGTCATGCAGCAAGGA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTGGTCGTTTCCTTGCTaGATGACTGCAAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTWSFPC*MTAKAS
Trigger: GGATGCTTTTGCAGTCATGCAGCAAGGAAACGACCA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATTTGCCACAAAGATGCTaGGATCTGCTGTACTTTTGG +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNLPQRC*DLLYFW
Trigger: CCAAAAGTACAGCAGATCCCAGCATCTTTGTGGCAA...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAAGGTGTGGAAATGACTaGCGGACTCAGCATATGCCG +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQERCGND*RTQHMP
Trigger: CGGCATATGCTGAGTCCGCCAGTCATTTCCACACCT...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGAGCTCGGAACTTGGCTaGAGCTGCGAAAACTCAAGA +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMSSELG*SCENSR
Trigger: TCTTGAGTTTTCGCAGCTCCAGCCAAGTTCCGAGCT...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTGCGTTGTGTGGACAGTaGTCAATGGTGATGTTGCTT +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCALCGQ*SMVMLL
Trigger: AAGCAACATCACCATTGACCACTGTCCACACAACGC...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATAAGACTCAGTTAAAATaGGCGTTGTGTGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNKTQLK*ALCGQW
Trigger: CCACTGTCCACACAACGCCCATTTTAACTGAGTCTT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCTGCGATCTGCAGCACTaGGTATCCCAGATAGAAACT +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGACDLQH*VSQIET
Trigger: AGTTTCTATCTGGGATACCCAGTGCTGCAGATCGCA...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAATTGAGCTGTGGATACTaGAAGGGCTCTGCGATCTGC +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQELSCGY*KGSAIC
Trigger: GCAGATCGCAGAGCCCTTCCAGTATCCACAGCTCAA...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCTCTGCGGAGCTCTGTaGGACCTGCCATCGTTGACG +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHLCGAL*DLPSLT
Trigger: CGTCAACGATGGCAGGTCCCACAGAGCTCCGCAGAG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTACCTGGTCTTGGCAATaGACCCGTCGGGGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPTWSWQ*TRRGSH
Trigger: ATGACTCCCCCGACGGGTCCATTGCCAAGACCAGGT...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCCGAGTAGATCCCTCTaGCAGCAAATGGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPPSRSL*QQMGLR
Trigger: CCGAAGCCCCATTTGCTGCCAGAGGGATCTACTCGG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAACCCTGCAGTCCCCGGTaGGGGAGGTTCCCGGAAGGA +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEPCSPR*GRFPEG
Trigger: TCCTTCCGGGAACCTCCCCCACCGGGGACTGCAGGG...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTCCCACAGAAACGCTTaGTTCCTTTCATCCCTATGC +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCSHRNA*FLSSLC
Trigger: GCATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAAAGGTGAAGGGCCCTTaGAGCTGTAGCACCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEKVKGP*SCSTRR
Trigger: TCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTT...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTAAGGCTCATGTCTGCTaGGTTATTTGGTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCKAHVC*VIWCQR
Trigger: TCTCTGGCACCAAATAACCCAGCAGACATGAGCCTT...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTTCCACGCCATTTGCCTaGGTAGCTGCCCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPSTPFA*VAALPS
Trigger: TGAAGGCAGGGCAGCTACCCAGGCAAATGGCGTGGA...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGAGATCTTCACAGCCCTaGTCGTTTCCTTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKRSSQP*SFPCCM
Trigger: CATGCAGCAAGGAAACGACCAGGGCTGTGAAGATCT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTCTGTCACTTTCTTACTaGCTCCTAACTTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLLSLSY*LLTLFH
Trigger: ATGAAACAAAGTTAGGAGCCAGTAAGAAAGTGACAG...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATAGAGCCAGAAAAACATaGACCTTGACAAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNRARKT*TLTKEG
Trigger: TCCCTCCTTTGTCAAGGTCCATGTTTTTCTGGCTCT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 72 bp GAGCGGAACTGGGTGAGAAGGGGCCATTTATCCCGTTaGCTGTCACACGATTTGAATTCATTACAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: ERNWVRRGHLSR*LSHDLNSLQGV
Trigger: GACACCTTGTAATGAATTCAAATCGTGTGACAGCAAACGGGATAAATGGCCCCTTCTCACCCAGTTCCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 72 bp TGCTCCACAAAGGATATGGCGTGGCCAAACGGCTGCTaGAGATCTGCTCTAAACAATGACCTCAGTGTCATT +
Preference number: 4 (lower is better)
Translates to: CSTKDMAWPNGC*RSALNNDLSVI
Trigger: AATGACACTGAGGTCATTGTTTAGAGCAGATCTCAAGCAGCCGTTTGGCCACGCCATATCCTTTGTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCCTCTTTACTCGTCACTaGCACGTAAGTTGCCACAAA +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTLFTRH*HVSCHK
Trigger: TTTGTGGCAACTTACGTGTCAGTGACGAGTAAAGAG...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCGTTTCTTCTAGGCTTTaGCTCAACACAGTGGTCACA +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCVSSRL*LNTVVT
Trigger: TGTGACCACTGTGTTGAGTCAAAGCCTAGAAGAAAC...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATTATGACAGAGAAAGATaGGTCAAGGAGAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNYDRER*VKENAG
Trigger: ACCAGCATTCTCCTTGACTCATCTTTCTCTGTCATA...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCAATGGTGATGTTGCTTaGATCCCGGCAGTCAAAATG +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTNGDVA*IPAVKM
Trigger: CATTTTGACTGCCGGGATTCAAGCAACATCACCATT...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGCCAGGACAGACACGTaGCCGTCTAGAGCACTGATT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMARTDT*PSRALI
Trigger: AATCAGTGCTCTAGACGGTCACGTGTCTGTCCTGGC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCACTGCACGGTTGAAGTaGATCCTCAGTACTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCTARLK*ILSTSL
Trigger: CAAAGAAGTACTGAGGATTCACTTCAACCGTGCAGT...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAATCTCAATGCGCTGGGTaGAGTTGCAGAAGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQESQCAG*SCRSQY
Trigger: ATACTGGCTTCTGCAACTTCACCCAGCGCATTGAGA...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACGTTTCCAGTAGAGGATaGCAACAATCACCATCACCA +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDVSSRG*QQSPSP
Trigger: TGGTGATGGTGATTGTTGTCATCCTCTACTGGAAAC...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGGAAACTCTTCCTCTGTaGCGAACATTCTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMETLPL*RTFLEG
Trigger: CCCTTCCAAGAATGTTCGTCACAGAGGAAGAGTTTC...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCAGATACACAGGTTTTaGTCAGTCAGAGCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCQIHRF*SVRAPN
Trigger: ATTTGGGGCTCTGACTGATCAAAACCTGTGTATCTG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCAGATACACAGGTTTTaGTCAGTCAGAGCCCCAAAT +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMQIHRF*SVRAPN
Trigger: ATTTGGGGCTCTGACTGATCAAAACCTGTGTATCTG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCTTTGTTGAACGTCCTTaGGAGACTTACTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAFVERP*ETYSPA
Trigger: TGCAGGAGAGTAAGTCTCTCAAGGACGTTCAACAAA...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGGGACATCTGCACACATaGTCACATCTGATTCTCACA +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMGHLHT*SHLILT
Trigger: TGTGAGAATCAGATGTGATCATGTGTGCAGATGTCC...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCAGTCACTTCAGAAGTTaGCGTCTCCCCAAGATATTG +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGASHFRS*RLPKIL
Trigger: CAATATCTTGGGGAGACGTCAACTTCTGAAGTGACT...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCCTCTTCCTTCTCTTCTaGAACTCCCTCAATAGTGCA +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTLFLLF*NSLNSA
Trigger: TGCACTATTGAGGGAGTTTCAGAAGAGAAGGAAGAG...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCGAAAGAAGGAACGCTaGACCTGTCCACGGGAAACG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPRKKER*TCPRET
Trigger: CGTTTCCCGTGGACAGGTTCAGCGTTCCTTCTTTCG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATCTTAGCAATGTACCATaGTGTTGCGATTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNLSNVP*CCDFQV
Trigger: GACTTGGAAATCGCAACATCATGGTACATTGCTAAG...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGATCAGTGTATCTGTCTaGACTTGTGGCCCAAACCTC +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMISVSV*TCGPNL
Trigger: GAGGTTTGGGCCACAAGTGCAGACAGATACACTGAT...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGCGGGGAGGGCTGAATTaGTATGCAATTCGGATGTTT +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMRGGLN*YAIRMF
Trigger: AAACATCCGAATTGCATAGCAATTCAGCCCTCCCCG...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGCTTCCAGCACGGTCATaGACAGAGTCTCGGCACCAT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMLPARS*TESRHH
Trigger: ATGGTGCCGAGACTCTGTGCATGACCGTGCTGGAAG...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTTCATTAGAGAGATGCTaGTTTCTTCCAGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCSLERC*FLPARS
Trigger: TGACCGTGCTGGAAGAAAGCAGCATCTCTCTAATGA...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACTACTCATTAGAGAGATaGTGCTTTCTTCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDYSLER*CFLPAR
Trigger: CCGTGCTGGAAGAAAGCAGCATCTCTCTAATGAGTA...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAAGACAGAGACGCAGGTaGTTCCGAAGGCGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRRQRRR*FRRRRD
Trigger: ATCTCTTCGCCTTCGGAAGCACCTGCGTCTCTGTCT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCACCGGTGCTGGTTGTaGTCACTTCCGTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHHRCWL*SLPWRC
Trigger: ACACCTCCACGGAAGTGAGCACAACCAGCACCGGTG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGTGATATTCAAGATCTaGACCGTGAGGTTATACGTT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFVIFKI*TVRLYV
Trigger: AACGTATAACCTCACGGTGCAGATCTTGAATATCAC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGATCTTGTTGCGATGGTaGTCGATCTCAGACTTGTGC +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMILLRW*SISDLC
Trigger: GCACAAGTCTGAGATCGAGCACCATCGCAACAAGAT...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCAGAGACTTACTCTCCTaGACTCCTTCTCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTRDLLS*TPSLSE
Trigger: CTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCT...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGTTTCACAGTGCTTTATaGTCCCTCCTCACAGGACAT +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMFHSAL*SLLTGH
Trigger: ATGTCCTGTGAGGAGGGAGCATAAAGCACTGTGAAA...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGGTGAATTACTGCCAATaGACTGCAAATCAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMVNYCQ*TANQCP
Trigger: CGGACACTGATTTGCAGTGCATTGGCAGTAATTCAC...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCGTGAATTACTGCCAATaGACTGCAAATCAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTVNYCQ*TANQCP
Trigger: CGGACACTGATTTGCAGTGCATTGGCAGTAATTCAC...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTGTGTAATCAGGGACTaGAAGAGACTCAAGTCACTC +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTCVIRD*KRLKSL
Trigger: GAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCGGTCCAGTGAGTATCTaGCAGAAAGTTATCCATCTC +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCGPVSI*QKVIHL
Trigger: GAGATGGATAACTTTCTGCCAGATACTCACTGGACC...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAATGCAGTGGTCACGCTaGATGGCGTCACTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRMQWSR*MASLGF
Trigger: AAACCCAAGTGACGCCATCCAGCGTGACCACTGCAT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTATGCTCAGAAAAACTaGAACGTTCTTGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFYAQKN*NVLGQR
Trigger: TCTCTGACCAAGAACGTTCCAGTTTTTCTGAGCATA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCAATCCAAAGCACCTCTaGGTTTATGCTCAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFNPKHL*VYAQKN
Trigger: GTTTTTCTGAGCATAAACCCAGAGGTGCTTTGGATT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCAAAACTCAAGATTTGTaGAACTGGGAAGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFKTQDL*NWEETA
Trigger: AGCTGTCTCTTCCCAGTTCCACAAATCTTGAGTTTT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTAGGCAGCTCGGAACTTaGCTGGAGCTGCGAAAACTC +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPRQLGT*LELRKL
Trigger: GAGTTTTCGCAGCTCCAGCCAAGTTCCGAGCTGCCT...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGGTGACTGCGGATTCATaGGAAATGAGTGAAGACTCA +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMVTADS*EMSEDS
Trigger: TGAGTCTTCACTCATTTCCCATGAATCCGCAGTCAC...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCAAGACTCAGTTAAAATaGGCGTTGTGTGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCKTQLK*ALCGQW
Trigger: CCACTGTCCACACAACGCCCATTTTAACTGAGTCTT...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAACACGGGACGCAGGGATaGCAGGGGAGGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEHGTQG*QGRSST
Trigger: AGTGCTGCTCCTCCCCTGCCATCCCTGCGTCCCGTG...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGTTGGAACCTGGACTCTaGCACAAGGAAAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMLEPGL*HKERRF
Trigger: AAACCTTCTTTCCTTGTGCCAGAGTCCAGGTTCCAA...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTTTGAACTTGGAACCTaGACTCTGGCACAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCFELGT*TLAQGK
Trigger: CTTTCCTTGTGCCAGAGTCCAGGTTCCAAGTTCAAA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTTATACGTTCCCTGGTaGTGTTTTCTCACTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFLYVPW*CFLTSK
Trigger: CTTTGAAGTGAGAAAACACCACCAGGGAACGTATAA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGTGCGATCTGCAGCACTaGGTATCCCAGATAGAAACT +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMCDLQH*VSQIET
Trigger: AGTTTCTATCTGGGATACCCAGTGCTGCAGATCGCA...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTCCTGGCAGTGGCGCTaGCTCATGAATAATCAATAT +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCSWQWR*LMNNQY
Trigger: ATATTGATTATTCATGAGCCAGCGCCACTGCCAGGA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTCCTGGCAGTGGCGCTaGCTCATGAATAATCAATAT +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTSWQWR*LMNNQY
Trigger: ATATTGATTATTCATGAGCCAGCGCCACTGCCAGGA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGCCACGTGCTCGAAGATaGAGGCTGATGAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMPRARR*RLMSAA
Trigger: AGCAGCACTCATCAGCCTCCATCTTCGAGCACGTGG...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAACTTCCGTGGAGCTGGTaGGGTAACCCAGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHELPWSW*GNPAQG
Trigger: GCCCTGGGCTGGGTTACCCCACCAGCTCCACGGAAG...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCAGGAAGCGGATACTTaGCAAATCTGCGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPQEADT*QICEAR
Trigger: CCTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCGGTGATGGCTTTGTTTaGAGTCATCAGGCTCTACAA +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCGDGFV*SHQALQ
Trigger: TTGTAGAGCCTGATGACTCCAAACAAAGCCATCACC...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGACGATCGGTGCTGAACTaGGACATGACCAGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRRSVLN*DMTRSC
Trigger: ACAACTCCTGGTCATGTCCCAGTTCAGCACCGATCG...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTGCCCAGATGAAAACTaGCTACATCTTACCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCCPDEN*LHLTFP
Trigger: TGGGAAGGTAAGATGTAGCCAGTTTTCATCTGGGCA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATGGCCCTGAGCGGAACTaGGTGAGAAGGGGCCATTTA +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHGPERN*VRRGHL
Trigger: TAAATGGCCCCTTCTCACCCAGTTCCGCTCAGGGCC...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATAGAAGGAACCAGACATaGTCAGTGAGTGACAAAGTA +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNRRNQT*SVSDKV
Trigger: TACTTTGTCACTCACTGACCATGTCTGGTTCCTTCT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCAGAGCCAGAAAAACATaGACCTTGACAAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTRARKT*TLTKEG
Trigger: TCCCTCCTTTGTCAAGGTCCATGTTTTTCTGGCTCT...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAAGAGGTGCGAAAAGCTaGCCGAAAGGTGTGGAAATG +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRRGAKS*PKGVEM
Trigger: CATTTCCACACCTTTCGGTCAGCTTTTCGCACCTCT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGGTTTCTTCTAGGCTTTaGCTCAACACAGTGGTCACA +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMVSSRL*LNTVVT
Trigger: TGTGACCACTGTGTTGAGTCAAAGCCTAGAAGAAAC...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCCACGTCTTTCTCCATaGGGCTCGTGGCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHPRLSP*GSWPEL
Trigger: AAGTTCTGGCCACGAGCCTCATGGAGAAAGACGTGG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCAAAGCTGAGGTAAAATaGGCTTCTGAATCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCKAEVK*ASESVS
Trigger: ACTGACGGATTCAGAAGCTCATTTTACCTCAGCTTT...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGTTCATGGGAAATGAGTaGAGACTCAAGATAGGAGGT +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMFMGNE*RLKIGG
Trigger: ACCTCCTATCTTGAGTCTTCACTCATTTCCCATGAA...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAACGTTCCATCTCGGCTTaGAACACTTCATTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQERSISA*NTSFWS
Trigger: ACTCCAGAATGAAGTGTTTCAAGCCGAGATGGAACG...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCAATTGCCAGCCCAGTaGAAGGCTCATGAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPQLPAQ*KAHELS
Trigger: TGACAGCTCATGAGCCTTTCACTGGGCTGGCAATTG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCACAGAGAGGCTGAACTaGACTCAATTTCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGATERLN*TQFHFQ
Trigger: CTGGAAATGAAATTGAGTTCAGTTCAGCCTCTCTGT...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTCATTACAGAGAGGCTaGACTGAACTCAATTTCATT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFSLQRG*TELNFI
Trigger: AATGAAATTGAGTTCAGTTCAGCCTCTCTGTAATGA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGAGTCACTTCAGAAGTTaGCGTCTCCCCAAGATATTG +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMSHFRS*RLPKIL
Trigger: CAATATCTTGGGGAGACGTCAACTTCTGAAGTGACT...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGCTCTTCCTTCTCTTCTaGAACTCCCTCAATAGTGCA +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKLFLLF*NSLNSA
Trigger: TGCACTATTGAGGGAGTTTCAGAAGAGAAGGAAGAG...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATATCTGCTCTAAACAATaGCCTCAGTGTCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNICSKQ*PQCHSH
Trigger: ATGAGAATGACACTGAGGTCATTGTTTAGAGCAGAT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCTTAGCAATGTACCATaGTGTTGCGATTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCLSNVP*CCDFQV
Trigger: GACTTGGAAATCGCAACATCATGGTACATTGCTAAG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTTTAAGTTGCAGTATTaGTGCCACAGTTGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTFKLQY*CHSWPQ
Trigger: TTGAGGCCAACTGTGGCATCAATACTGCAACTTAAA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTATCGTATACCCATACTaGGATTTCAGTGCCTGTTTG +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCIVYPY*DFSACL
Trigger: CAAACAGGCACTGAAATCTCAGTATGGGTATACGAT...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTAAGTTGCCACAAAGATaGTGGGATCTGCTGTACTTT +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCKLPQR*WDLLYF
Trigger: AAAGTACAGCAGATCCCAGCATCTTTGTGGCAACTT...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACAGGGCTGAATTGCTATaGAATTCGGATGTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDRAELL*NSDVLL
Trigger: CAGCAAAACATCCGAATTGCATAGCAATTCAGCCCT...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGTCATTAGAGAGATGCTaGTTTCTTCCAGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKSLERC*FLPARS
Trigger: TGACCGTGCTGGAAGAAAGCAGCATCTCTCTAATGA...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGATGACCGAGAAAAATaGAGTGGTCACGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRDDREK*SGHAGW
Trigger: CCATCCAGCGTGACCACTGCATTTTTCTCGGTCATC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGAACTTGGCTGGAGCTaGGAAAACTCAAGATTTGTG +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKELGWS*ENSRFV
Trigger: CACAAATCTTGAGTTTTCGCAGCTCCAGCCAAGTTC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCAGTACTTCTTTGATTaGTGTAATGATGTACTCCTG +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFQYFFD*CNDVLL
Trigger: CAGGAGTACATCATTACAGCAATCAAAGAAGTACTG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTAGGATCTTGTCGATCTaGATCTGTGCCCTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPRILSI*ICALRY
Trigger: GTACCGCAGGGCACAGATGCAGATCGACAAGATCCT...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCATTTCCTTTTGGTCTTaGTTCCACAGGAAGCGGATA +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTISFWS*FHRKRI
Trigger: TATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAAT...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAAAGTGTTCAGACAATTaGCAGCCCAGTGAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEKCSDN*QPSERL
Trigger: GAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTT...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGAGAGACTTACTCTCCTaGACTCCTTCTCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKRDLLS*TPSLSE
Trigger: CTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATGGGCATTCTCTCCAATaGTCCTTGGAGCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHGHSLQ*SLEPLR
Trigger: CCTCAGAGGCTCCAAGGAGCATTGGAGAGAATGCCC...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACACAGAACCCTCTTTCTaGAATGCTCAAAGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDTEPSF*NAQRRL
Trigger: TAACCTCCTTTGAGCATTGCAGAAAGAGGGTTCTGT...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCAGTACAAACTGTGTGTaGTTTATGACCACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCSTNCV*FMTTSR
Trigger: TCTGCTGGTGGTCATAAAGCACACACAGTTTGTACT...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCTGTTCATTGTAGAGTaGTTCCATAAACGGACTCCA +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGALFIVE*FHKRTP
Trigger: TGGAGTCCGTTTATGGAAGCACTCTACAATGAACAG...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCCTGTTCATTGTAGAGTaGTTCCATAAACGGACTCCA +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCLFIVE*FHKRTP
Trigger: TGGAGTCCGTTTATGGAAGCACTCTACAATGAACAG...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGCTACATTTTCACAGTaGTTTATGCTCCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKATFSQ*FMLPPH
Trigger: GTGAGGAGGGAGCATAAAGCACTGTGAAAATGTAGC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACTTGCATTTCCAAACATaGAACTTCTTCTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDLHFQT*NFFWVP
Trigger: AGGCACCCAGAAGAAGTTGCATGTTTGGAAATGCAA...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATGTCCTCCTTCCCCTGTaGCCAAAACGTTACCCAGCT +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHVLLPL*PKRYPA
Trigger: AGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGAC...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGTGTGTAATCAGGGACTaGAAGAGACTCAAGTCACTC +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMCVIRD*KRLKSL
Trigger: GAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACA...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTCAGCACGAGCTCCATaGAGTATAAAGAAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTSARAP*SIKKGC
Trigger: ACAACCTTTCTTTATACTCCATGGAGCTCGTGCTGA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACTCAGCACGAGCTCCATaGAGTATAAAGAAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDSARAP*SIKKGC
Trigger: ACAACCTTTCTTTATACTCCATGGAGCTCGTGCTGA...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGGTCCAGTGAGTATCTaGCAGAAAGTTATCCATCTC +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKGPVSI*QKVIHL
Trigger: GAGATGGATAACTTTCTGCCAGATACTCACTGGACC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCTCAGCATATGCCGCTaGTTGTCGCGTTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPLSICR*LSRCVL
Trigger: CAGAACACAACGCGACAACCAGCGGCATATGCTGAG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGAGGTGTGGAAATGACTaGCGGACTCAGCATATGCCG +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMRCGND*RTQHMP
Trigger: CGGCATATGCTGAGTCCGCCAGTCATTTCCACACCT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGATGCAGTGGTCACGCTaGATGGCGTCACTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMMQWSR*MASLGF
Trigger: AAACCCAAGTGACGCCATCCAGCGTGACCACTGCAT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGAGGATTAAAGGAGTCTaGTCACGGACAAGCTTACTG +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKRIKGV*SRTSLL
Trigger: CAGTAAGCTTGTCCGTGACCAGACTCCTTTAATCCT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGTTTGAACTTGGAACCTaGACTCTGGCACAAGGAAAG +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKFELGT*TLAQGK
Trigger: CTTTCCTTGTGCCAGAGTCCAGGTTCCAAGTTCAAA...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCAGGTTATACGTTCCCTaGTGGTGTTTTCTCACTTCA +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGARLYVP*WCFLTS
Trigger: TGAAGTGAGAAAACACCACCAGGGAACGTATAACCT...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACATGATGGCTGCTCTCTaGAGGTCCATTTTGTTAATC +
Preference number: 4 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDMMAAL*RSILLI
Trigger: GATTAACAAAATGGACCTCCAGAGAGCAGCCATCAT...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGACGCTGCTGAATGTTaGCCACAGTGTCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMDAAEC*PQCQAE
Trigger: TTCAGCCTGACACTGTGGCCAACATTCAGCAGCGTC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGCAGAGGTCCTGGCAGTaGCGCTGGCTCATGAATAAT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMQRSWQ*RWLMNN
Trigger: ATTATTCATGAGCCAGCGCCACTGCCAGGACCTCTG...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCAGAGGTCCTGGCAGTaGCGCTGGCTCATGAATAAT +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPQRSWQ*RWLMNN
Trigger: ATTATTCATGAGCCAGCGCCACTGCCAGGACCTCTG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTGAGCTCCAATTCTGCTaGCAATCCCCACCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPELQFC*QSPPVS
Trigger: TGACACAGGTGGGGATTGCCAGCAGAATTGGAGCTC...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCAGTTGATTTCCTTTTaGTCTTGCTTCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMQLISF*SCFHRK
Trigger: CTTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCCTGTCACACGACGTATaGCATCTTCTAAATTGCAAC +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTLSHDV*HLLNCN
Trigger: GTTGCAATTTAGAAGATGCCATACGTCGTGTGACAG...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCTGTCACACGACGTATaGCATCTTCTAAATTGCAAC +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMLSHDV*HLLNCN
Trigger: GTTGCAATTTAGAAGATGCCATACGTCGTGTGACAG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGAGAAGGAACCAGACATaGTCAGTGAGTGACAAAGTA +
Preference number: 4 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMRRNQT*SVSDKV
Trigger: TACTTTGTCACTCACTGACCATGTCTGGTTCCTTCT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGTTTTGCCATGTTGCCTaGGCTGGTTTTAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMFCHVA*AGFKLL
Trigger: CAAGAGCTTAAAACCAGCCCAGGCAACATGGCAAAA...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGAGCTAAAGTTAGCGTaGGAGTTAAGACCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRELKLA*ELRPES
Trigger: GGACTCCGGTCTTAACTCCCACGCTAACTTTAGCTC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCCTGTCACTTTCTTACTaGCTCCTAACTTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFLSLSY*LLTLFH
Trigger: ATGAAACAAAGTTAGGAGCCAGTAAGAAAGTGACAG...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCTGAAACAAGTCCTCTaGTGCTTAGAGCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGALKQVL*CLEQLN
Trigger: ATTCAGTTGCTCTAAGCACCAGAGGACTTGTTTCAG...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 72 bp CTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTaGCTTCCACAGGAAGCGGATACTTGGCAAATCTGC +
Preference number: 4 (lower is better)
Translates to: LPNTHSVDFLLV*LPQEADTWQIC
Trigger: GCAGATTTGCCAAGTATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 72 bp CCACATTTGCAGGAGGAACAGTACAGCATATGCGACTaGAACTTGGCCCTGTACTATTCCCAACTTGTACAC +
Preference number: 4 (lower is better)
Translates to: PHLQEEQYSICD*NLALYYSQLVH
Trigger: GTGTACAAGTTGGGAATAGTACAGGGCCAAGTTCAAGTCGCATATGCTGTACTGTTCCTCCTGCAAATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGTATGACAGAGAAAGATaGGTCAAGGAGAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKYDRER*VKENAG
Trigger: ACCAGCATTCTCCTTGACTCATCTTTCTCTGTCATA...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAAAAAAGACTGAGATGTaGAGGGGGACAAGTCACTCG +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRKKTEM*RGTSHS
Trigger: CGAGTGACTTGTCCCCCTTCACATCTCAGTCTTTTT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATGACAGTGGTCAATGGTaGTGTTGCTTGAATCCCGGC +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHDSGQW*CCLNPG
Trigger: GCCGGGATTCAAGCAACATCACCATTGACCACTGTC...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGTTCCACTGCACGGTTaGAGTGAATCCTCAGTACTT +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRVPLHG*SESSVL
Trigger: AAGTACTGAGGATTCACTTCAACCGTGCAGTGGAAC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATCAGTTAGGACCTCTTaGAAGCCGCATTCTACAGGA +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRSVRTS*KPHSTG
Trigger: TCCTGTAGAATGCGGCTTTCAAGAGGTCCTAACTGA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCATCTGCTCTAAACAATaGCCTCAGTGTCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCICSKQ*PQCHSH
Trigger: ATGAGAATGACACTGAGGTCATTGTTTAGAGCAGAT...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGAGGACCAGCAAACCATaGTTGTCAAGTTTAAGTTGC +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKRTSKP*LSSLSC
Trigger: GCAACTTAAACTTGACAATCATGGTTTGCTGGTCCT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGAAGTTGCCACAAAGATaGTGGGATCTGCTGTACTTT +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKKLPQR*WDLLYF
Trigger: AAAGTACAGCAGATCCCAGCATCTTTGTGGCAACTT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATAGACAGAGACGCAGGTaGTTCCGAAGGCGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHRQRRR*FRRRRD
Trigger: ATCTCTTCGCCTTCGGAAGCACCTGCGTCTCTGTCT...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCACCAGTGCAGTGACTaGGGATTCATGGGAAATGAG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPHQCSD*GFMGNE
Trigger: CTCATTTCCCATGAATCCGCAGTCACTGCACTGGTG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCATTTATGACGGATATTaGCGTGTAAACGAAAGGACC +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTIYDGY*RVNERT
Trigger: GGTCCTTTCGTTTACACGGCAATATCCGTCATAAAT...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCGTGATATTCAAGATCTaGACCGTGAGGTTATACGTT +
Preference number: 4 (lower is better)
Translates to: PALLLFQRCPDENWLHLTVIFKI*TVRLYV
Trigger: AACGTATAACCTCACGGTGCAGATCTTGAATATCAC...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATATACTGGAAGGGCTCTaGGATCTGCAGCACTGGGTA +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHILEGL*DLQHWV
Trigger: TACCCAGTGCTGCAGATCGCAGAGCCCTTCCAGTAT...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTATGGAGGCTGATGAGTaGTGCTCATTTCCCGAACTG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPMEADE*CSFPEL
Trigger: CAGTTCGGGAAATGAGCAGCACTCATCAGCCTCCAT...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCTTTGTTTTTGTGAAGTaGTGCTGGCTTTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAFVFVK*CWLLAK
Trigger: TTTGGCCAAAAGCCAGCAGCACTTCACAAAAACAAA...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTTCCTTTCATCCCTATaGTGTCTATACAGTTTAATC +
Preference number: 4 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFFLSSL*CLYSLI
Trigger: GATTAAACTGTATAGACAGCATAGGGATGAAAGGAA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGACCAGGAGTTGTGTGTaGCCAATTAAGAAACAGCAA +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMTRSCV*PIKKQQ
Trigger: TTGCTGTTTCTTAATTGGGCACACACAACTCCTGGT...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAACTTCTCTTTCAGAGGTaGCCAGATGAAAACTGGCTA +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQELLFQR*PDENWL
Trigger: TAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAG...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATGAAAGACATCAAAATTaGTTTTACGGTCAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNERHQN*FYGQPN
Trigger: ATTGGGCTGACCGTAAAAGCAATTTTGATGTCTTTC...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTCGGGAGCAGAAAGATaGTTAATAAATGCAATCGGA +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCSGAER*LINAIG
Trigger: TCCGATTGCATTTATTAAGCATCTTTCTGCTCCCGA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCGTCTCCCCAAGATATTaGATTTCCAAACATGCAACT +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAVSPRY*ISKHAT
Trigger: AGTTGCATGTTTGGAAATGCAATATCTTGGGGAGAC...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATGCGTGGCCAAACGGCTaGTTGAGATCTGCTCTAAAC +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHAWPNG*LRSALN
Trigger: GTTTAGAGCAGATCTCAAGCAGCCGTTTGGCCACGC...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAATGTTTTGTGTTCACATaGTCTGTCTGCCGGTACAGA +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQECFVFT*SVCRYR
Trigger: TCTGTACCGGCAGACAGAGCATGTGAACACAAAACA...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTGTGATATACTGTATTaGAGAAACCATCCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCCDILY*RNHPWS
Trigger: ACTCCACGGATGGTTTCTCCAATACAGTATATCACA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTTTTGACTCAACACAGTaGTCACATCAGTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCFDSTQ*SHQCIC
Trigger: ACAGATACACTGATGTGACCACTGTGTTGAGTCAAA...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCAATCCAAAGCACCTCTaGGTTTATGCTCAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTNPKHL*VYAQKN
Trigger: GTTTTTCTGAGCATAAACCCAGAGGTGCTTTGGATT...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAGTGACTGCGGATTCATaGGAAATGAGTGAAGACTCA +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEVTADS*EMSEDS
Trigger: TGAGTCTTCACTCATTTCCCATGAATCCGCAGTCAC...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGAGGTTATACGTTCCCTaGTGGTGTTTTCTCACTTCA +
Preference number: 4 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMRLYVP*WCFLTS
Trigger: TGAAGTGAGAAAACACCACCAGGGAACGTATAACCT...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTTTGTGAAGTGCTGCTaGCTTTTGGCCAAAATACAT +
Preference number: 4 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTFVKCC*LLAKIH
Trigger: ATGTATTTTGGCCAAAAGCCAGCAGCACTTCACAAA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATGATAATCGTTCAATTTaGGAGGAGTCGGGTATTAAA +
Preference number: 4 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNDNRSI*EESGIK
Trigger: TTTAATACCCGACTCCTCCCAAATTGAACGATTATC...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGTCTGCTGGGTTATTTaGTGCCAGAGACACCAGAAA +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRVCWVI*CQRHQK
Trigger: TTTCTGGTGTCTCTGGCACCAAATAACCCAGCAGAC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAGTGGCCAGAACTTGCTaGGGTGAAGGCACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEVARTC*GEGTVQ
Trigger: CTGCACTGTGCCTTCACCTCAGCAAGTTCTGGCCAC...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGCCAACACTCGTCTCTaGGATTTCCATGGATCTAGA +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMANTRL*DFHGSR
Trigger: TCTAGATCCATGGAAATCTCAGAGACGAGTGTTGGC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGAAAAAGACTGAGATGTaGAGGGGGACAAGTCACTCG +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMKKTEM*RGTSHS
Trigger: CGAGTGACTTGTCCCCCTTCACATCTCAGTCTTTTT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATTCAAGATCTGCACCGTaGGGTTATACGTTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHSRSAP*GYTFPG
Trigger: ACCAGGGAACGTATAACCTCACGGTGCAGATCTTGA...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCATGACTGTCTTCGCTaGTCTAATAAAAACAGGTTA +
Preference number: 4 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAHDCLR*SNKNRL
Trigger: TAACCTGTTTTTATTAGATCAGCGAAGACAGTCATG...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATTTGTTGAACGTCCTTaGGAGACTTACTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRFVERP*ETYSPA
Trigger: TGCAGGAGAGTAAGTCTCTCAAGGACGTTCAACAAA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAATGCTGTCACACGATTTaGATTCATTACAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQECCHTI*IHYKVS
Trigger: GGACACCTTGTAATGAATTCAAATCGTGTGACAGCA...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGGTGAAAACTCCACTTaGGCTAAAGTTAGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMGENST*AKVSVG
Trigger: TCCCACGCTAACTTTAGCTCAAGTGGAGTTTTCACC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAAGGACCAGCAAACCATaGTTGTCAAGTTTAAGTTGC +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQERTSKP*LSSLSC
Trigger: GCAACTTAAACTTGACAATCATGGTTTGCTGGTCCT...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAATATAAAGAAAGGTTGTaGTGTTCCGGAGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEYKERL*CSGESS
Trigger: TGAGCTCTCTCCGGAACAGCACAACCTTTCTTTATA...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAAGGGCTGAATTGCTATaGAATTCGGATGTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQERAELL*NSDVLL
Trigger: CAGCAAAACATCCGAATTGCATAGCAATTCAGCCCT...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCGGGGAGGGCTGAATTaGTATGCAATTCGGATGTTT +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPRGGLN*YAIRMF
Trigger: AAACATCCGAATTGCATAGCAATTCAGCCCTCCCCG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGATTTATGACGGATATTaGCGTGTAAACGAAAGGACC +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKIYDGY*RVNERT
Trigger: GGTCCTTTCGTTTACACGGCAATATCCGTCATAAAT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAGCAGCTGGGCCAGCTTaGGTTCCATCTCGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEAAGPA*VPSRLE
Trigger: TTCAAGCCGAGATGGAACGCAAGCTGGCCCAGCTGC...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGTCCGAAGACTTGACTaGACTGAGTCTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMVRRLD*TESFSI
Trigger: GATGGAGAAAGACTCAGTGCAGTCAAGTCTTCGGAC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAGCCTACCTTCACCCGTaGTTTGCCTCACAGTCCGCA +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEAYLHP*FASQSA
Trigger: TGCGGACTGTGAGGCAAAGCACGGGTGAAGGTAGGC...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTTCACATGCTCTGTCTaGCGGTACAGAAGTGGACTT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMFTCSV*RYRSGL
Trigger: AAGTCCACTTCTGTACCGGCAGACAGAGCATGTGAA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAACAGTTGGCCTCAATTTaGTCTGCACATTTCGTACAT +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEQLASI*SAHFVH
Trigger: ATGTACGAAATGTGCAGAGCAAATTGAGGCCAACTG...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATGGATCTAGAAGAAAGTaGGACGATAGGTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHGSRRK*DDRSGG
Trigger: CCCTCCAGACCTATCGTCCCACTTTCTTCTAGATCC...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGTGTTGAGAAAAAGCTaGATGCAAAATCCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKVLRKS*MQNPKH
Trigger: GTGCTTTGGATTTTGCATCCAGCTTTTTCTCAACAC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAATGTGACGAACATTCTTaGAAGGGATCTTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQECDEHS*KGSLTW
Trigger: CCAAGTCAAAGATCCCTTCCAAGAATGTTCGTCACA...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAACAGTTCCACCGAGGATaGTGTCTGCACATCGGCTGG +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEQFHRG*CLHIGW
Trigger: CCAGCCGATGTGCAGACACCATCCTCGGTGGAACTG...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAACCGGGGCCAAAACCTaGTCTTGGCAATGGACCCGT +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHETGAKT*SWQWTR
Trigger: ACGGGTCCATTGCCAAGACCAGGTTTTGGCCCCGGT...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCGATAATCGTTCAATTTaGGAGGAGTCGGGTATTAAA +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCDNRSI*EESGIK
Trigger: TTTAATACCCGACTCCTCCCAAATTGAACGATTATC...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTCTGAGTTTGGTGACTaGCAAAACTGTTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMSEFGD*QNCCGR
Trigger: CCTGCCACAACAGTTTTGCCAGTCACCAAACTCAGA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATTTTGCCATGTTGCCTaGGCTGGTTTTAAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRFCHVA*AGFKLL
Trigger: CAAGAGCTTAAAACCAGCCCAGGCAACATGGCAAAA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATACAAAGGATATGGCGTaGCCAAACGGCTGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHTKDMA*PNGCLR
Trigger: TCTCAAGCAGCCGTTTGGCCACGCCATATCCTTTGT...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 72 bp ATCGTACACGTACCAGTCTCAATCCCACAGAAACGCTaGGTTCCTTTCATCCCTATGCTGTCTATACAGTTT +
Preference number: 4 (lower is better)
Translates to: IVHVPVSIPQKR*VPFIPMLSIQF
Trigger: AAACTGTATAGACAGCATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTACGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAATGGCCAGCACAGTTGTaGTCAGATAGGCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEWPAQL*SDRHRG
Trigger: TCCCCGATGCCTATCTGATCACAACTGTGCTGGCCA...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGAGTGGCGCTGGCTCATaGATAATCAATATGTCGTCT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMSGAGS*IINMSS
Trigger: AGACGACATATTGATTATTCATGAGCCAGCGCCACT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTGAAGAAGAATACTCTTaGTGTCCGAGCATGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPEEEYS*CPSMCV
Trigger: CACACACATGCTCGGACATCAAGAGTATTCTTCTTC...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422774.2
CDS-3UTR TCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATACGGTCAGCCCAATTTaGAACAGAACCCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHTVSPI*NRTLFL
Trigger: CAGAAAGAGGGTTCTGTTTCAAATTGGGCTGACCGT...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTCAAGTTCATTTCAGTaGCAGCTTCACTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMSSSFQ*QLHSFP
Trigger: AGGGAAGGAGTGAAGCTGTCACTGAAATGAACTTGA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAACGAAAGAAGGAACGCTaGACCTGTCCACGGGAAACG +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHERKKER*TCPRET
Trigger: CGTTTCCCGTGGACAGGTTCAGCGTTCCTTCTTTCG...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGACAGCATATGCGACTTaGACTTGGCCCTGTACTATT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMTAYAT*TWPCTI
Trigger: AATAGTACAGGGCCAAGTTCAAGTCGCATATGCTGT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTGAAAAACATGGACCTTaGCAAAGGAGGGAGAGACAA +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPEKHGP*QRRERQ
Trigger: TTGTCTCTCCCTCCTTTGTCAAGGTCCATGTTTTTC...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATTTAAGTTGCAGTATTaGTGCCACAGTTGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRFKLQY*CHSWPQ
Trigger: TTGAGGCCAACTGTGGCATCAATACTGCAACTTAAA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATAAAGCACCAAATTCCTaGCAGGAGTTGGAACGATGC +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHKAPNS*QELERC
Trigger: GCATCGTTCCAACTCCTGGCAGGAATTTGGTGCTTT...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAGCAGGCGGATCTTGTTaGGATGGTGCTCGATCTCAG +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEAGGSC*DGARSQ
Trigger: CTGAGATCGAGCACCATCGCAACAAGATCCGCCTGC...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAGGAAGTTCTGCACGGTaGTCTGTTTCTGGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEGSSAR*SVSGRA
Trigger: GGCTCTCCCAGAAACAGAGCACCGTGCAGAACTTCC...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAATTTGTTTTTGTGAAGTaGTGCTGGCTTTTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEFVFVK*CWLLAK
Trigger: TTTGGCCAAAAGCCAGCAGCACTTCACAAAAACAAA...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTTTCCTTTCATCCCTATaGTGTCTATACAGTTTAATC +
Preference number: 4 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCFLSSL*CLYSLI
Trigger: GATTAAACTGTATAGACAGCATAGGGATGAAAGGAA...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCGCCTGATAAGATGCTaGTGGTCCTTTGTTGAACGT +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHRLIRC*WSFVER
Trigger: ACGTTCAACAAAGGACCAGCAGCATCTTATCAGGCG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGCTACATTTTCACAGTaGTTTATGCTCCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMATFSQ*FMLPPH
Trigger: GTGAGGAGGGAGCATAAAGCACTGTGAAAATGTAGC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAATCGGGAGCAGAAAGATaGTTAATAAATGCAATCGGA +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQESGAER*LINAIG
Trigger: TCCGATTGCATTTATTAAGCATCTTTCTGCTCCCGA...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAGTAGAGACGGGGTTTTaGCATGTTGCCTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEVETGF*HVAWAG
Trigger: ACCAGCCCAGGCAACATGGCAAAACCCCGTCTCTAC...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTTCTTTCCCCACATTTaGAGGAGGAACAGTACAGCA +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMFFPHI*RRNSTA
Trigger: TGCTGTACTGTTCCTCCTGCAAATGTGGGGAAAGAA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTTGTCAAGTTTAAGTTaGAGTATTGATGCCACAGTT +
Preference number: 4 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCLSSLS*SIDATV
Trigger: AACTGTGGCATCAATACTGCAACTTAAACTTGACAA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAAAACTGGAACGTTCTTaGTCAGAGAAAAGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEKLERS*SEKSED
Trigger: GTCTTCACTTTTCTCTGACCAAGAACGTTCCAGTTT...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATGCGTTGTGTGGACAGTaGTCAATGGTGATGTTGCTT +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHALCGQ*SMVMLL
Trigger: AAGCAACATCACCATTGACCACTGTCCACACAACGC...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGAAAATGGGCGTTGTGTaGACAGTGGTCAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMKMGVV*TVVNGD
Trigger: ATCACCATTGACCACTGTCCACACAACGCCCATTTT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCTGATAAGATGCTGCTaGTCCTTTGTTGAACGTCCT +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPLIRCC*SFVERP
Trigger: AGGACGTTCAACAAAGGACCAGCAGCATCTTATCAG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTAAAGCTGAGGTAAAATaGGCTTCTGAATCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPKAEVK*ASESVS
Trigger: ACTGACGGATTCAGAAGCTCATTTTACCTCAGCTTT...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTATCGTATACCCATACTaGGATTTCAGTGCCTGTTTG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPIVYPY*DFSACL
Trigger: CAAACAGGCACTGAAATCTCAGTATGGGTATACGAT...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTTCTCTGGCAGAGTCCTaGTTGATAAATGACTGTAAG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPSLAES*LINDCK
Trigger: CTTACAGTCATTTATCAAGCAGGACTCTGCCAGAGA...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAACCACCTCGGCAGAAATaGCAACACTCGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEPPRQK*QHSSLR
Trigger: TCTCAGAGACGAGTGTTGGCATTTCTGCCGAGGTGG...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTATTTCCTTTTGGTCTTaGTTCCACAGGAAGCGGATA +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPISFWS*FHRKRI
Trigger: TATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAAT...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGACCCTCTTTCTGCAATaGTCAAAGGAGGTTACCATT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMTLFLQ*SKEVTI
Trigger: AATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTATAGATAACCCACTATaGTCCACAAAGGATATGGCG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPIDNPL*STKDMA
Trigger: CGCCATATCCTTTGTGGAGCATAGTGGGTTATCTAT...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGATAGATAACCCACTATaGTCCACAAAGGATATGGCG +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMIDNPL*STKDMA
Trigger: CGCCATATCCTTTGTGGAGCATAGTGGGTTATCTAT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAGTGTTGAGAAAAAGCTaGATGCAAAATCCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRVLRKS*MQNPKH
Trigger: GTGCTTTGGATTTTGCATCCAGCTTTTTCTCAACAC...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAGGCAGTAGCCAGTGTTaGTGTGTCGACTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEGSSQC*CVDCCF
Trigger: GAAGCAACAGTCGACACACCAACACTGGCTACTGCC...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATTTGGAACCTGGACTCTaGCACAAGGAAAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHLEPGL*HKERRF
Trigger: AAACCTTCTTTCCTTGTGCCAGAGTCCAGGTTCCAA...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATTATACGTTCCCTGGTaGTGTTTTCTCACTTCAAAG +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRLYVPW*CFLTSK
Trigger: CTTTGAAGTGAGAAAACACCACCAGGGAACGTATAA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 72 bp CAGAACAGCCCTTGCCACTGTTTTCTTTACCATTATTaGGAAAGTGGGGGAAATGTTTACATCAGGAGTACA +
Preference number: 4 (lower is better)
Translates to: QNSPCHCFLYHY*ESGGNVYIRST
Trigger: TGTACTCCTGATGTAAACATTTCCCCCACTTTCCAAATAATGGTAAAGAAAACAGTGGCAAGGGCTGTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAACGTAGAGTCAGCATCTaGGGGAGAAACTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHERRVSI*GRNSSS
Trigger: AGAGGAAGAGTTTCTCCCTCAGATGCTGACTCTACG...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAACGTTTCCTTGCTGCATaGCTGCAAAAGCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHERFLAA*LQKHPS
Trigger: GGAAGGATGCTTTTGCAGTCATGCAGCAAGGAAACG...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATTCTCTGGCAGAGTCCTaGTTGATAAATGACTGTAAG +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHSLAES*LINDCK
Trigger: CTTACAGTCATTTATCAAGCAGGACTCTGCCAGAGA...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAATGGTGTGTCGACTGTTaGTTCGAGAGTGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEWCVDC*FESEGS
Trigger: ACTGCCTTCACTCTCGAAGCAACAGTCGACACACCA...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTAAACAGAACAGCCCTTaGCACTGTTTTCTTTACCAT +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPKQNSP*HCFLYH
Trigger: ATGGTAAAGAAAACAGTGGCAAGGGCTGTTCTGTTT...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGATGTTCTTGGAGAGATaGTTTCTTCTAGGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMMFLER*FLLGFD
Trigger: GTCAAAGCCTAGAAGAAACCATCTCTCCAAGAACAT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGAAACTGGAACGTTCTTaGTCAGAGAAAAGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMKLERS*SEKSED
Trigger: GTCTTCACTTTTCTCTGACCAAGAACGTTCCAGTTT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTATGCTCAGAAAAACTaGAACGTTCTTGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMYAQKN*NVLGQR
Trigger: TCTCTGACCAAGAACGTTCCAGTTTTTCTGAGCATA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGAAAACTCAAGATTTGTaGAACTGGGAAGAGACAGCT +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMKTQDL*NWEETA
Trigger: AGCTGTCTCTTCCCAGTTCCACAAATCTTGAGTTTT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATTGTGACGAACATTCTTaGAAGGGATCTTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHCDEHS*KGSLTW
Trigger: CCAAGTCAAAGATCCCTTCCAAGAATGTTCGTCACA...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAAGATCTTCACAGCCCTaGTCGTTTCCTTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHERSSQP*SFPCCM
Trigger: CATGCAGCAAGGAAACGACCAGGGCTGTGAAGATCT...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGAAAAGGAAGGATCCTaGATAATTATCTACCCTGTG +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMEKEGS*IIIYPV
Trigger: CACAGGGTAGATAATTATCCAGGATCCTTCCTTTTC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAAAGAGACAGCTGAGATaGCTGCAGATCACTAGAGTC +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEKRQLR*LQITRV
Trigger: GACTCTAGTGATCTGCAGTCATCTCAGCTGTCTCTT...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATAGGGGTCTTAAAACTTaGCACAGATACACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHRGLKT*HRYTGF
Trigger: AAAACCTGTGTATCTGTGTCAAGTTTTAAGACCCCT...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCAGTACTTCTTTGATTaGTGTAATGATGTACTCCTG +
Preference number: 4 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPQYFFD*CNDVLL
Trigger: CAGGAGTACATCATTACAGCAATCAAAGAAGTACTG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAATGCTGGGTTATTTGGTaGCAGAGACACCAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHECWVIW*QRHQKV
Trigger: GACTTTCTGGTGTCTCTGGCACCAAATAACCCAGCA...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATTGTCAAGTTTAAGTTaGAGTATTGATGCCACAGTT +
Preference number: 4 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRLSSLS*SIDATV
Trigger: AACTGTGGCATCAATACTGCAACTTAAACTTGACAA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATTTTGACTCAACACAGTaGTCACATCAGTGTATCTGT +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHFDSTQ*SHQCIC
Trigger: ACAGATACACTGATGTGACCACTGTGTTGAGTCAAA...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATATGTTCTTGGAGAGATaGTTTCTTCTAGGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHMFLER*FLLGFD
Trigger: GTCAAAGCCTAGAAGAAACCATCTCTCCAAGAACAT...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAGATATCACAAACATATaGCGGCTTGGCAGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEDITNI*RLGSSQ
Trigger: CTGGCTACTGCCAAGCCGCCATATGTTTGTGATATC...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGACATGCAACTTCTTCTaGGTGCCTAATTCATTTATG +
Preference number: 4 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMTCNFF*VPNSFM
Trigger: CATAAATGAATTAGGCACCCAGAAGAAGTTGCATGT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCATCATCTTTGGTCTTaGCATCTGTTTAAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHHHLWS*HLFKGV
Trigger: TACACCTTTAAACAGATGTCAAGACCAAAGATGATG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAAAAATGGGCGTTGTGTaGACAGTGGTCAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEKMGVV*TVVNGD
Trigger: ATCACCATTGACCACTGTCCACACAACGCCCATTTT...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAAGGATTAAAGGAGTCTaGTCACGGACAAGCTTACTG +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHERIKGV*SRTSLL
Trigger: CAGTAAGCTTGTCCGTGACCAGACTCCTTTAATCCT...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAATGCCCAGATGAAAACTaGCTACATCTTACCTTCCCA +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHECPDEN*LHLTFP
Trigger: TGGGAAGGTAAGATGTAGCCAGTTTTCATCTGGGCA...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 72 bp AGAAGGGGCCATTTATCCCGTTTGCTGTCACACGATTaGAATTCATTACAAGGTGTCCATAATAAAATTCTG +
Preference number: 4 (lower is better)
Translates to: RRGHLSRLLSHD*NSLQGVHNKIL
Trigger: CAGAATTTTATTATGGACACCTTGTAATGAATTCAAATCGTGTGACAGCAAACGGGATAAATGGCCCCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAAAACACCCACTCAGTTaGTTTCCTTTTGGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEKHPLS*FPFGLA
Trigger: AGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTT...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAATTGCATTTCCAAACATaGAACTTCTTCTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHELHFQT*NFFWVP
Trigger: AGGCACCCAGAAGAAGTTGCATGTTTGGAAATGCAA...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAATGATGGCTGCTCTCTaGAGGTCCATTTTGTTAATC +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEMMAAL*RSILLI
Trigger: GATTAACAAAATGGACCTCCAGAGAGCAGCCATCAT...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CCA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATCTACAACCTATCATTTaGTTTCTCACTAGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHLQPII*FLTSSF
Trigger: AAAGCTACTAGTGAGAAACCAAATGATAGGTTGTAG...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR TCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAAGGGGTCTTAAAACTTaGCACAGATACACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHERGLKT*HRYTGF
Trigger: AAAACCTGTGTATCTGTGTCAAGTTTTAAGACCCCT...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAAAACAGAACAGCCCTTaGCACTGTTTTCTTTACCAT +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEKQNSP*HCFLYH
Trigger: ATGGTAAAGAAAACAGTGGCAAGGGCTGTTCTGTTT...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAGTCTCCCCAAGATATTaGATTTCCAAACATGCAACT +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEVSPRY*ISKHAT
Trigger: AGTTGCATGTTTGGAAATGCAATATCTTGGGGAGAC...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR GCA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAAAACAAGTCCTCTGGTaGTTAGAGCAACTGAATGAA +
Preference number: 4 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEKQVLW*LEQLNE
Trigger: TTCATTCAGTTGCTCTAAGCACCAGAGGACTTGTTT...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
3UTR CAA 72 bp GGAGCAGAAAGATGCTTAATAAATGCAATCGGAAAATaGGTGAAGGAAGTGAAATTAAAGCAAAATGGGAGT +
Preference number: 4 (lower is better)
Translates to: GAERCLINAIGK*VKEVKLKQNGS
Trigger: ACTCCCATTTTGCTTTAATTTCACTTCCTTCACCAATTTTCCGATTGCATTTATTAAGCATCTTTCTGCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp AGGCCGGGTGGGACTCCGGGGCCTACACCTGCGGTGCTGGCAGGCTaGCTGCTGGGGGCCACGAGGGCAAAGGCGTCGTCCAGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: RPGGTPGPTPAVLAG*LLGATRAKASSRRE
Trigger: CTCCCTCCTGGACGACGCCTTTGCCCTCGTGGCCCCCAGCAGCCAGCCTGCCAGCACCGCAGGTGTAGGCCCCGGAGTCCCACCCGGCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp TTGCGGGCAGGCCGGGTGGGACTCCGGGGCCTACACCTGCGGTGCTaGCAGGCTGGCTGCTGGGGGCCACGAGGGCAAAGGCGTCGTCCA +
Preference number: 5 (lower is better)
Translates to: LRAGRVGLRGLHLRC*QAGCWGPRGQRRRP
Trigger: TGGACGACGCCTTTGCCCTCGTGGCCCCCAGCAGCCAGCCTGCCAGCACCGCAGGTGTAGGCCCCGGAGTCCCACCCGGCCTGCCCGCAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp CGGGTGGGACTCCGGGGCCTACACCTGCGGTGCTGGCAGGCTGGCTaGTGGGGGCCACGAGGGCAAAGGCGTCGTCCAGGAGGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: RVGLRGLHLRCWQAG*WGPRGQRRRPGGSA
Trigger: TGCACTCCCTCCTGGACGACGCCTTTGCCCTCGTGGCCCCCAGCAGCCAGCCTGCCAGCACCGCAGGTGTAGGCCCCGGAGTCCCACCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp GAGAGGCCGAGGAGTGGCCAGGCTGGAGGTCTTCCGTGGAGCTGGTaGGGTAACCCAGCCCAGGGCCCTGCAGTCCCCGGTGGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: ERPRSGQAGGLPWSW*GNPAQGPAVPGGGG
Trigger: ACCTCCCCCACCGGGGACTGCAGGGCCCTGGGCTGGGTTACCCCACCAGCTCCACGGAAGACCTCCAGCCTGGCCACTCCTCGGCCTCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp TGGCTGCTGGGGGCCACGAGGGCAAAGGCGTCGTCCAGGAGGGAGTaGATGGTCTGGCGTGCCTCCTCGATGGACGGCTGGGGTGGGATG +
Preference number: 5 (lower is better)
Translates to: WLLGATRAKASSRRE*MVWRASSMDGWGGM
Trigger: CATCCCACCCCAGCCGTCCATCGAGGAGGCACGCCAGACCATGCACTCCCTCCTGGACGACGCCTTTGCCCTCGTGGCCCCCAGCAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp GCCGAGGCCGGGCCACCGACGGCATCTCCTCCGAGTAGATCCCTCTaGCAGCAAATGGGGCTTCGGCGGAGGCCTGTGGCTGCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: AEAGPPTASPPSRSL*QQMGLRRRPVAAEG
Trigger: ACCCTCAGCAGCCACAGGCCTCCGCCGAAGCCCCATTTGCTGCCAGAGGGATCTACTCGGAGGAGATGCCGTCGGTGGCCCGGCCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp CACGAGGGCAAAGGCGTCGTCCAGGAGGGAGTGCATGGTCTGGCGTaGCTCCTCGATGGACGGCTGGGGTGGGATGTACTGGGAGGCCGG +
Preference number: 5 (lower is better)
Translates to: HEGKGVVQEGVHGLA*LLDGRLGWDVLGGR
Trigger: CCGGCCTCCCAGTACATCCCACCCCAGCCGTCCATCGAGGAGGCACGCCAGACCATGCACTCCCTCCTGGACGACGCCTTTGCCCTCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp GGGGCCACGAGGGCAAAGGCGTCGTCCAGGAGGGAGTGCATGGTCTaGCGTGCCTCCTCGATGGACGGCTGGGGTGGGATGTACTGGGAG +
Preference number: 5 (lower is better)
Translates to: GATRAKASSRRECMV*RASSMDGWGGMYWE
Trigger: CTCCCAGTACATCCCACCCCAGCCGTCCATCGAGGAGGCACGCCAGACCATGCACTCCCTCCTGGACGACGCCTTTGCCCTCGTGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp GGCCACCGACGGCATCTCCTCCGAGTAGATCCCTCTGGCAGCAAATaGGGCTTCGGCGGAGGCCTGTGGCTGCTGAGGGTCAGGGGGCAC +
Preference number: 5 (lower is better)
Translates to: GHRRHLLRVDPSGSK*GFGGGLWLLRVRGH
Trigger: GTGCCCCCTGACCCTCAGCAGCCACAGGCCTCCGCCGAAGCCCCATTTGCTGCCAGAGGGATCTACTCGGAGGAGATGCCGTCGGTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp GCAGTGGTGGCCCGCTCTGCGGAGCTCTGTGGGACCTGCCATCGTTaGCGGCTCCCGGCGTCTTATCTCCTGCGTCCCTCTCGCTGGACT +
Preference number: 5 (lower is better)
Translates to: AVVARSAELCGTCHR*RLPASYLLRPSRWT
Trigger: AGTCCAGCGAGAGGGACGCAGGAGATAAGACGCCGGGAGCCGTCAACGATGGCAGGTCCCACAGAGCTCCGCAGAGCGGGCCACCACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp GAGGGAGTGCATGGTCTGGCGTGCCTCCTCGATGGACGGCTGGGGTaGGATGTACTGGGAGGCCGGGAAGGGAAGGGCTGGATACCTCCC +
Preference number: 5 (lower is better)
Translates to: EGVHGLACLLDGRLG*DVLGGREGKGWIPP
Trigger: GGGAGGTATCCAGCCCTTCCCTTCCCGGCCTCCCAGTACATCCCACCCCAGCCGTCCATCGAGGAGGCACGCCAGACCATGCACTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp TGCTGGGGGCCACGAGGGCAAAGGCGTCGTCCAGGAGGGAGTGCATaGTCTGGCGTGCCTCCTCGATGGACGGCTGGGGTGGGATGTACT +
Preference number: 5 (lower is better)
Translates to: CWGPRGQRRRPGGSA*SGVPPRWTAGVGCT
Trigger: AGTACATCCCACCCCAGCCGTCCATCGAGGAGGCACGCCAGACCATGCACTCCCTCCTGGACGACGCCTTTGCCCTCGTGGCCCCCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp GGGCACGCTGGCCGTGGGGTCCAGGATCTTGTCGATCTGCATCTGTaGCCTGCGGTACACCCGGTGTCGCTCCTTAGTGTCGCCCGAGGA +
Preference number: 5 (lower is better)
Translates to: GHAGRGVQDLVDLHL*PAVHPVSLLSVARG
Trigger: TCCTCGGGCGACACTAAGGAGCGACACCGGGTGTACCGCAGGGCACAGATGCAGATCGACAAGATCCTGGACCCCACGGCCAGCGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp AGTCACGGGACGCAGGGATGGCAGGGGAGGAGCAGCACTACTCTCTaGGGGGCTCTGACTTGCGGCGTCACCCATCAGGGTGGAGTCGAG +
Preference number: 5 (lower is better)
Translates to: SHGTQGWQGRSSTTL*GALTCGVTHQGGVE
Trigger: CTCGACTCCACCCTGATGGGTGACGCCGCAAGTCAGAGCCCCCCAGAGAGTAGTGCTGCTCCTCCCCTGCCATCCCTGCGTCCCGTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp TCCAGGAGGGAGTGCATGGTCTGGCGTGCCTCCTCGATGGACGGCTaGGGTGGGATGTACTGGGAGGCCGGGAAGGGAAGGGCTGGATAC +
Preference number: 5 (lower is better)
Translates to: SRRECMVWRASSMDG*GGMYWEAGKGRAGY
Trigger: GTATCCAGCCCTTCCCTTCCCGGCCTCCCAGTACATCCCACCCCAGCCGTCCATCGAGGAGGCACGCCAGACCATGCACTCCCTCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCCCCTGCCTGAAGTCCTaGGCACGGCCTCTCTTCGCC +
Preference number: 5 (lower is better)
Translates to: HQQRAGDPGACSHHTITTPCLKS*ARPLFA
Trigger: GGCGAAGAGAGGCCGTGCCAAGGACTTCAGGCAGGG...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000440172.5
CDS GCA 90 bp GGAACTCGTAGTGCCCGCGGCGCTTGGCGCGCAGGCGGATCTTGTTaGGATGGTGCTCGATCTCAGACTTGTGCCGCAGCGCGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: GTRSARGAWRAGGSC*DGARSQTCAAARSE
Trigger: TTCAGACCGCGCTGCGGCACAAGTCTGAGATCGAGCACCATCGCAACAAGATCCGCCTGCGCGCCAAGCGCCGCGGGCACTACGAGTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp CACCCATCAGGGTGGAGTCGAGGGGACCACCAGTGGCAGCACCGGTaGTGGTTGTGCTCACTTCCGTGGAGGTGTTCAGTGGCACCTCTG +
Preference number: 5 (lower is better)
Translates to: HPSGWSRGDHQWQHR*WLCSLPWRCSVAPL
Trigger: CAGAGGTGCCACTGAACACCTCCACGGAAGTGAGCACAACCAGCACCGGTGCTGCCACTGGTGGTCCCCTCGACTCCACCCTGATGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp GGGCGGGAGATCCTGTCCACGTGCTCGAAGATGGAGGCTGATGAGTaGTGCTCATTTCCCGAACTGGGCAGTGGTGGCCCGCTCTGCGGA +
Preference number: 5 (lower is better)
Translates to: GREILSTCSKMEADE*CSFPELGSGGPLCG
Trigger: TCCGCAGAGCGGGCCACCACTGCCCAGTTCGGGAAATGAGCAGCACTCATCAGCCTCCATCTTCGAGCACGTGGACAGGATCTCCCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp AACACGGAGGGCACGCTGGCCGTGGGGTCCAGGATCTTGTCGATCTaGATCTGTGCCCTGCGGTACACCCGGTGTCGCTCCTTAGTGTCG +
Preference number: 5 (lower is better)
Translates to: NTEGTLAVGSRILSI*ICALRYTRCRSLVS
Trigger: CGACACTAAGGAGCGACACCGGGTGTACCGCAGGGCACAGATGCAGATCGACAAGATCCTGGACCCCACGGCCAGCGTGCCCTCCGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp CCATCAGGGTGGAGTCGAGGGGACCACCAGTGGCAGCACCGGTGCTaGTTGTGCTCACTTCCGTGGAGGTGTTCAGTGGCACCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: PSGWSRGDHQWQHRC*LCSLPWRCSVAPLW
Trigger: CCACAGAGGTGCCACTGAACACCTCCACGGAAGTGAGCACAACCAGCACCGGTGCTGCCACTGGTGGTCCCCTCGACTCCACCCTGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp GACTTGCGGCGTCACCCATCAGGGTGGAGTCGAGGGGACCACCAGTaGCAGCACCGGTGCTGGTTGTGCTCACTTCCGTGGAGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: DLRRHPSGWSRGDHQ*QHRCWLCSLPWRCS
Trigger: TGAACACCTCCACGGAAGTGAGCACAACCAGCACCGGTGCTGCCACTGGTGGTCCCCTCGACTCCACCCTGATGGGTGACGCCGCAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp AGGACAGGTCGTCTACCACCGGGAACTCGTAGTGCCCGCGGCGCTTaGCGCGCAGGCGGATCTTGTTGCGATGGTGCTCGATCTCAGACT +
Preference number: 5 (lower is better)
Translates to: RTGRLPPGTRSARGA*RAGGSCCDGARSQT
Trigger: AGTCTGAGATCGAGCACCATCGCAACAAGATCCGCCTGCGCGCCAAGCGCCGCGGGCACTACGAGTTCCCGGTGGTAGACGACCTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTCCGCTGGTTGTCGCGTaGTGTTCTGCCAGCCCGATG +
Preference number: 5 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPPLVVA*CSASPM
Trigger: CATCGGGCTGGCAGAACACAACGCGACAACCAGCGG...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCACCTTCACCCGTGCTTaGCCTCACAGTCCGCATGCC +
Preference number: 5 (lower is better)
Translates to: HQQRAGDPGACSHHTITTTFTRA*PHSPHA
Trigger: GGCATGCGGACTGTGAGGCAAAGCACGGGTGAAGGT...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp CGGGAGATCCTGTCCACGTGCTCGAAGATGGAGGCTGATGAGTGCTaGTCATTTCCCGAACTGGGCAGTGGTGGCCCGCTCTGCGGAGCT +
Preference number: 5 (lower is better)
Translates to: REILSTCSKMEADEC*SFPELGSGGPLCGA
Trigger: AGCTCCGCAGAGCGGGCCACCACTGCCCAGTTCGGGAAATGAGCAGCACTCATCAGCCTCCATCTTCGAGCACGTGGACAGGATCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp CACGGTGCTCTGTTTCTGGGAGAGCCGGAGGAGCTCCTCGCGGATTaGTTTGATGAGAGAGGCCGAGGAGTGGCCAGGCTGGAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: HGALFLGEPEELLAD*FDERGRGVARLEVF
Trigger: GAAGACCTCCAGCCTGGCCACTCCTCGGCCTCTCTCATCAAAGCAATCCGCGAGGAGCTCCTCCGGCTCTCCCAGAAACAGAGCACCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp GTAGTGGCAGACGGCGGGGCTGTGACATGGAGAGGACTGCTGTGCTaGGAGCCGGGAGCAGTTTCTGTTAAGGCCACTTGTGCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: VVADGGAVTWRGLLC*EPGAVSVKATCAAL
Trigger: CAGCGCTGCACAAGTGGCCTTAACAGAAACTGCTCCCGGCTCCCAGCACAGCAGTCCTCTCCATGTCACAGCCCCGCCGTCTGCCACTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCCGCAGGCGGATCTTGTaGCGATGGTGCTCGATCTCA +
Preference number: 5 (lower is better)
Translates to: HQQRAGDPGACSHHTITTRRRIL*RWCSIS
Trigger: TGAGATCGAGCACCATCGCAACAAGATCCGCCTGCG...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp TTGTGCTCACTTCCGTGGAGGTGTTCAGTGGCACCTCTGTGGGTGTaGGTGATGGGCCCACGACGGTCAGCTCTGTGGGCAGAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: LCSLPWRCSVAPLWV*VMGPRRSALWAEGR
Trigger: CCTTCCCTCTGCCCACAGAGCTGACCGTCGTGGGCCCATCACTCACACCCACAGAGGTGCCACTGAACACCTCCACGGAAGTGAGCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp TGTGAAGGGGGACAAGTCACTCGGCATCAGAGACAGAGACGCAGGTaGTTCCGAAGGCGAAGAGATGGAGCCGCTGAGTTCCAGCGGGGG +
Preference number: 5 (lower is better)
Translates to: CEGGQVTRHQRQRRR*FRRRRDGAAEFQRG
Trigger: CCCCCGCTGGAACTCAGCGGCTCCATCTCTTCGCCTTCGGAAGCACCTGCGTCTCTGTCTCTGATGCCGAGTGACTTGTCCCCCTTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp GGCTGCCTCTGCTTGGCGGGATTTCCACTGGCTGAGCTCCAATTCTaGTGGCAATCCCCACCTGTGTCAGGTGCTGGATCTGGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GCLCLAGFPLAELQF*WQSPPVSGAGSGSL
Trigger: CAGGCTCCCAGATCCAGCACCTGACACAGGTGGGGATTGCCAGCAGAATTGGAGCTCAGCCAGTGGAAATCCCGCCAAGCAGAGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp TACTTGGCAAATCTGCGAGGCGAGGCCGATCAGCTGTGGAAGTTCTaGACGGTGCTCTGTTTCTGGGAGAGCCGGAGGAGCTCCTCGCGG +
Preference number: 5 (lower is better)
Translates to: YLANLRGEADQLWKF*TVLCFWESRRSSSR
Trigger: CCGCGAGGAGCTCCTCCGGCTCTCCCAGAAACAGAGCACCGTGCAGAACTTCCACAGCTGATCGGCCTCGCCTCGCAGATTTGCCAAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp CTGAATCTCTTTGTTGATTTTATTGCTTTCCGCCACTCGGTCGGCTaGGGAGGGGCGCTGGACGGGAGGTGCCGGGATCGGCTGCATGGC +
Preference number: 5 (lower is better)
Translates to: LNLFVDFIAFRHSVG*GGALDGRCRDRLHG
Trigger: GCCATGCAGCCGATCCCGGCACCTCCCGTCCAGCGCCCCTCCCCAGCCGACCGAGTGGCGGAAAGCAATAAAATCAACAAAGAGATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTTCCTCGCGGATTGCTTaGATGAGAGAGGCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPSSRIA*MREAEE
Trigger: CTCCTCGGCCTCTCTCATCAAAGCAATCCGCGAGGA...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp TCTGTGGGACCTGCCATCGTTGACGGCTCCCGGCGTCTTATCTCCTaGGTCCCTCTCGCTGGACTCTTCACTGACCGTAGAGTCAGCATC +
Preference number: 5 (lower is better)
Translates to: SVGPAIVDGSRRLIS*VPLAGLFTDRRVSI
Trigger: GATGCTGACTCTACGGTCAGTGAAGAGTCCAGCGAGAGGGACGCAGGAGATAAGACGCCGGGAGCCGTCAACGATGGCAGGTCCCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp GCAGTCCCCGGTGGGGGAGGTTCCCGGAAGGAGCTGAGGGCTCCCTaGCTGAAGTCCTTGGCACCTGAAATAGCGGTGAAGAAGAATACT +
Preference number: 5 (lower is better)
Translates to: AVPGGGGSRKELRAP*LKSLAPEIAVKKNT
Trigger: AGTATTCTTCTTCACCGCTATTTCAGGTGCCAAGGACTTCAGGCAGGGAGCCCTCAGCTCCTTCCGGGAACCTCCCCCACCGGGGACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422774.2
CDS GCA 90 bp CAAATCTGCGAGGCGAGGCCGATCAGCTGTGGAAGTTCTGCACGGTaGTCTGTTTCTGGGAGAGCCGGAGGAGCTCCTCGCGGATTGCTT +
Preference number: 5 (lower is better)
Translates to: QICEARPISCGSSAR*SVSGRAGGAPRGLL
Trigger: AAGCAATCCGCGAGGAGCTCCTCCGGCTCTCCCAGAAACAGAGCACCGTGCAGAACTTCCACAGCTGATCGGCCTCGCCTCGCAGATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp GAGCCAGCAGTAGGATCAAGTGACGCCGGCACAGAGAGGCGGCCGTaGGCAGGGGGAACCTGTGTGGTTGTAACACTACTCATATCCACC +
Preference number: 5 (lower is better)
Translates to: EPAVGSSDAGTERRP*AGGTCVVVTLLIST
Trigger: GGTGGATATGAGTAGTGTTACAACCACACAGGTTCCCCCTGCCCACGGCCGCCTCTCTGTGCCGGCGTCACTTGATCCTACTGCTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp GTGATGAGCCGGTCCTTCTCAGCGTCGGCAGGACAGCCGTTGACCTaGTGTTTCCGGCGAGGCTTGGGAGAACGTTTTATCCGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: VMSRSFSASAGQPLT*CFRRGLGERFIREL
Trigger: GAGCTCACGGATAAAACGTTCTCCCAAGCCTCGCCGGAAACACCAGGTCAACGGCTGTCCTGCCGACGCTGAGAAGGACCGGCTCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp TGCCTCTGCTTGGCGGGATTTCCACTGGCTGAGCTCCAATTCTGCTaGCAATCCCCACCTGTGTCAGGTGCTGGATCTGGGAGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: CLCLAGFPLAELQFC*QSPPVSGAGSGSLW
Trigger: CCACAGGCTCCCAGATCCAGCACCTGACACAGGTGGGGATTGCCAGCAGAATTGGAGCTCAGCCAGTGGAAATCCCGCCAAGCAGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp GGCGAGGCCGATCAGCTGTGGAAGTTCTGCACGGTGCTCTGTTTCTaGGAGAGCCGGAGGAGCTCCTCGCGGATTGCTTTGATGAGAGAG +
Preference number: 5 (lower is better)
Translates to: GEADQLWKFCTVLCF*ESRRSSSRIALMRE
Trigger: CTCTCTCATCAAAGCAATCCGCGAGGAGCTCCTCCGGCTCTCCCAGAAACAGAGCACCGTGCAGAACTTCCACAGCTGATCGGCCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp GGAAGCGGATACTTGGCAAATCTGCGAGGCGAGGCCGATCAGCTGTaGAAGTTCTGCACGGTGCTCTGTTTCTGGGAGAGCCGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: GSGYLANLRGEADQL*KFCTVLCFWESRRS
Trigger: GCTCCTCCGGCTCTCCCAGAAACAGAGCACCGTGCAGAACTTCCACAGCTGATCGGCCTCGCCTCGCAGATTTGCCAAGTATCCGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCTGTATCTGTCTGCACTaGTGGCCCAAACCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: HQQRAGDPGACSHHTITTCICLH*WPKPPL
Trigger: CAGAGGAGGTTTGGGCCACAAGTGCAGACAGATACA...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCCCGGGGAGGGCTGAATaGCTATGCAATTCGGATGTT +
Preference number: 5 (lower is better)
Translates to: HQQRAGDPGACSHHTITTPGRAE*LCNSDV
Trigger: AACATCCGAATTGCATAGCAATTCAGCCCTCCCCGG...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp TGCACAGAGTCTCGGCACCATCCCCTGATCCCACGTCTTTCTCCATaGGGCTCGTGGCCAGAACTTGCTGAGGTGAAGGCACAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: CTESRHHPLIPRLSP*GSWPELAEVKAQCR
Trigger: CCTGCACTGTGCCTTCACCTCAGCAAGTTCTGGCCACGAGCCTCATGGAGAAAGACGTGGGATCAGGGGATGGTGCCGAGACTCTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp AACATATGGCGGCTTGGCAGTAGCCAGTGTTGGTGTGTCGACTGTTaGTTCGAGAGTGAAGGCAGTCACGGGACGCAGGGATGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: NIWRLGSSQCWCVDC*FESEGSHGTQGWQG
Trigger: CCCCTGCCATCCCTGCGTCCCGTGACTGCCTTCACTCTCGAAGCAACAGTCGACACACCAACACTGGCTACTGCCAAGCCGCCATATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp AGCACTGGGATGACCACGCCAACAATGACCCACAAGTTGTTGCTCTaGGATTCCGGAGACGGCCTCTTCACCCTGTCGACAGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: STGMTTPTMTHKLLL*DSGDGLFTLSTGWA
Trigger: TGCCCAGCCTGTCGACAGGGTGAAGAGGCCGTCTCCGGAATCCCAGAGCAACAACTTGTGGGTCATTGTTGGCGTGGTCATCCCAGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp TCCATAGTCTTCGTATCTACTGCAGGGATTGTTGGCCGTCTGGGCTaGGCTGTAGAAGGACCCCCACTGGGTGGCTCGCCTCTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SIVFVSTAGIVGRLG*AVEGPPLGGSPLFL
Trigger: CAGGAAGAGAGGCGAGCCACCCAGTGGGGGTCCTTCTACAGCCCAGCCCAGACGGCCAACAATCCCTGCAGTAGATACGAAGACTATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTCAAACATATGGCGGCTaGGCAGTAGCCAGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPQTYGG*AVASVG
Trigger: ACCAACACTGGCTACTGCCAAGCCGCCATATGTTTG...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTTGTTTCCGGCGAGGCTaGGGAGAACGTTTTATCCGT +
Preference number: 5 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPCFRRG*GERFIR
Trigger: ACGGATAAAACGTTCTCCCAAGCCTCGCCGGAAACA...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp AGTGTATCTGTCTGCACTTGTGGCCCAAACCTCCTCTGGAGGCTGTaGGACCTCCCCCAAGGAGGGCAACGGTATAGTAATGCCGTCGCC +
Preference number: 5 (lower is better)
Translates to: SVSVCTCGPNLLWRL*DLPQGGQRYSNAVA
Trigger: GGCGACGGCATTACTATACCGTTGCCCTCCTTGGGGGAGGTCTCACAGCCTCCAGAGGAGGTTTGGGCCACAAGTGCAGACAGATACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp GCTTTCTTCCAGCACGGTCATGCACAGAGTCTCGGCACCATCCCCTaGTCCCACGTCTTTCTCCATGAGGCTCGTGGCCAGAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: AFFQHGHAQSLGTIP*SHVFLHEARGQNLL
Trigger: CAGCAAGTTCTGGCCACGAGCCTCATGGAGAAAGACGTGGGATCAGGGGATGGTGCCGAGACTCTGTGCATGACCGTGCTGGAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp CTACAGTGGCCCTTCTCCACATCCGCCTTCTGGTGGAAACCTCGCTaGGCAGCTGGGCCAGCTTGCGTTCCATCTCGGCTTGAAACACTT +
Preference number: 5 (lower is better)
Translates to: LQWPFSTSAFWWKPR*AAGPACVPSRLETL
Trigger: AAGTGTTTCAAGCCGAGATGGAACGCAAGCTGGCCCAGCTGCTCAGCGAGGTTTCCACCAGAAGGCGGATGTGGAGAAGGGCCACTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCCTCTGGAGGTCCATTTaGTTAATCAGGTCCGAAGAC +
Preference number: 5 (lower is better)
Translates to: HQQRAGDPGACSHHTITTLWRSI*LIRSED
Trigger: GTCTTCGGACCTGATTAACAAAATGGACCTCCAGAG...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp GCTGAGGTGAAGGCACAGTGCAGGCCGCACACCAAGTGTATGGTCTaGATGAGGACACCGGGCTCAGGATATGAGTGTTGTCCACAGGAC +
Preference number: 5 (lower is better)
Translates to: AEVKAQCRPHTKCMV*MRTPGSGYECCPQD
Trigger: GTCCTGTGGACAACACTCATATCCTGAGCCCGGTGTCCTCATTCAGACCATACACTTGGTGTGCGGCCTGCACTGTGCCTTCACCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp TGCCCTCAGAGGTGCGAAAAGCTGACCGAAAGGTGTGGAAATGACTaGCGGACTCAGCATATGCCGCTGGTTGTCGCGTTGTGTTCTGCC +
Preference number: 5 (lower is better)
Translates to: CPQRCEKLTERCGND*RTQHMPLVVALCSA
Trigger: GGCAGAACACAACGCGACAACCAGCGGCATATGCTGAGTCCGCCAGTCATTTCCACACCTTTCGGTCAGCTTTTCGCACCTCTGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATGCGCGCAGGCGGATCTaGTTGCGATGGTGCTCGATC +
Preference number: 5 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNARRRI*LRWCSI
Trigger: GATCGAGCACCATCGCAACAAGATCCGCCTGCGCGC...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCACTGGCTGCCTCTGCTaGGCGGGATTTCCACTGGCT +
Preference number: 5 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFTGCLC*AGFPLA
Trigger: AGCCAGTGGAAATCCCGCCAAGCAGAGGCAGCCAGT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTATCCCACAGAAACGCTaGGTTCCTTTCATCCCTATG +
Preference number: 5 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPIPQKR*VPFIPM
Trigger: CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGAT...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCGCTGGTTTTAAGCTCTaGATCTCAAGTGATCCACCT +
Preference number: 5 (lower is better)
Translates to: HQQRAGDPGACSHHTITTAGFKL*ISSDPP
Trigger: AGGTGGATCACTTGAGATCAAGAGCTTAAAACCAGC...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCCGTCTCCCCAAGATATaGCATTTCCAAACATGCAAC +
Preference number: 5 (lower is better)
Translates to: HQQRAGDPGACSHHTITTRLPKI*HFQTCN
Trigger: GTTGCATGTTTGGAAATGCAATATCTTGGGGAGACG...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGCCCTGGTCGTTTCCTaGCTGCATGACTGCAAAAGC +
Preference number: 5 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLALVVS*LHDCKS
Trigger: GCTTTTGCAGTCATGCAGCAAGGAAACGACCAGGGC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp ACGATGCCCTCAGAGGTGCGAAAAGCTGACCGAAAGGTGTGGAAATaGCTGGCGGACTCAGCATATGCCGCTGGTTGTCGCGTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: TMPSEVRKADRKVWK*LADSAYAAGCRVVF
Trigger: GAACACAACGCGACAACCAGCGGCATATGCTGAGTCCGCCAGTCATTTCCACACCTTTCGGTCAGCTTTTCGCACCTCTGAGGGCATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp CACCGGGCTCAGGATATGAGTGTTGTCCACAGGACCGGGGAGGGCTaGATTGCTATGCAATTCGGATGTTTTGCTGGAGTCGCTAGGGAG +
Preference number: 5 (lower is better)
Translates to: HRAQDMSVVHRTGEG*IAMQFGCFAGVARE
Trigger: CTCCCTAGCGACTCCAGCAAAACATCCGAATTGCATAGCAATTCAGCCCTCCCCGGTCCTGTGGACAACACTCATATCCTGAGCCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp GAAACCTCGCTGAGCAGCTGGGCCAGCTTGCGTTCCATCTCGGCTTaGAACACTTCATTCTGGAGTTGCTTCTCCATGACGCCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: ETSLSSWASLRSISA*NTSFWSCFSMTPRR
Trigger: TCTCCTGGGCGTCATGGAGAAGCAACTCCAGAATGAAGTGTTTCAAGCCGAGATGGAACGCAAGCTGGCCCAGCTGCTCAGCGAGGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGTTCCAGCGGGGGTGTaGAGAAAAAGCTGGATGCAA +
Preference number: 5 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKVPAGV*RKSWMQ
Trigger: TTGCATCCAGCTTTTTCTCAACACCCCCGCTGGAAC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACCAGCACCGGTGCTGGTaGTGCTCACTTCCGTGGAGG +
Preference number: 5 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDQHRCW*CSLPWR
Trigger: CCTCCACGGAAGTGAGCACAACCAGCACCGGTGCTG...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCCAGCACCGGTGCTGGTaGTGCTCACTTCCGTGGAGG +
Preference number: 5 (lower is better)
Translates to: PALLLFQRCPDENWLHLTQHRCW*CSLPWR
Trigger: CCTCCACGGAAGTGAGCACAACCAGCACCGGTGCTG...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTATGCGCTGGGTGAAGTaGCAGAAGCCAGTATCCACA +
Preference number: 5 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLMRWVK*QKPVST
Trigger: TGTGGATACTGGCTTCTGCAACTTCACCCAGCGCAT...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGTCTTTGACTTGGGGCTaGGCACGTCTCCATTTTCCG +
Preference number: 5 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKSLTWG*ARLHFP
Trigger: CGGAAAATGGAGACGTGCCAAGCCCCAAGTCAAAGA...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTTCGGCAGGACAGCCGTaGACCTGGTGTTTCCGGCGA +
Preference number: 5 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCSAGQP*TWCFRR
Trigger: TCGCCGGAAACACCAGGTCAACGGCTGTCCTGCCGA...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGGGCCAAAACCTGGTCTaGGCAATGGACCCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMGQNLV*AMDPSG
Trigger: CCCCGACGGGTCCATTGCCAAGACCAGGTTTTGGCC...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTCAAACACCCACTCAGTaGATTTCCTTTTGGTCTTGC +
Preference number: 5 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPQTPTQ*ISFWSC
Trigger: GCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTG...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTGTACAATCTAGGATGTaGGCACAGCAACAAAACAGC +
Preference number: 5 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPVQSRM*AQQQNS
Trigger: GCTGTTTTGTTGCTGTGCCAACATCCTAGATTGTAC...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp CGACGCTACTCATTAGAGAGATGCTGCTTTCTTCCAGCACGGTCATaGACAGAGTCTCGGCACCATCCCCTGATCCCACGTCTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RRYSLERCCFLPARS*TESRHHPLIPRLSP
Trigger: TGGAGAAAGACGTGGGATCAGGGGATGGTGCCGAGACTCTGTGCATGACCGTGCTGGAAGAAAGCAGCATCTCTCTAATGAGTAGCGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp TTCCTTTTGGTCTTGCTTCCACAGGAAGCGGATACTTGGCAAATCTaGGAGGCGAGGCCGATCAGCTGTGGAAGTTCTGCACGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: FLLVLLPQEADTWQI*EARPISCGSSARCS
Trigger: AGAGCACCGTGCAGAACTTCCACAGCTGATCGGCCTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGCGTTCCATCTCGGCTaGAAACACTTCATTCTGGAG +
Preference number: 5 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLAFHLG*KHFILE
Trigger: CTCCAGAATGAAGTGTTTCAAGCCGAGATGGAACGC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATTATCTACTGCAGGGATaGTTGGCCGTCTGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNYLLQG*LAVWAG
Trigger: CCCAGCCCAGACGGCCAACAATCCCTGCAGTAGATA...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGATGCTGCTGGTCCTTaGTTGAACGTCCTTGAGAGA +
Preference number: 5 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKDAAGP*LNVLER
Trigger: TCTCTCAAGGACGTTCAACAAAGGACCAGCAGCATC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATTCTCTCCAATGCTCCTaGGAGCCTCTGAGGATCGCC +
Preference number: 5 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNSLQCS*EPLRIA
Trigger: GGCGATCCTCAGAGGCTCCAAGGAGCATTGGAGAGA...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACCAGCAGAGGGCTGGTGATCCGGGGGCCTGCTCACACCACACCATAACCACCTTGCTGTCACACGATTaGAATTCATTACAAGGTGTC +
Preference number: 5 (lower is better)
Translates to: HQQRAGDPGACSHHTITTLLSHD*NSLQGV
Trigger: GACACCTTGTAATGAATTCAAATCGTGTGACAGCAA...GGTGGTTATGGTGTGGTGTGAGCAGGCCCCCGGATCACCAGCCCTCTGCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCACCTTCACCCGTGCTTaGCCTCACAGTCCGCATGCC +
Preference number: 5 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTTFTRA*PHSPHA
Trigger: GGCATGCGGACTGTGAGGCAAAGCACGGGTGAAGGT...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CGGGAAACGGGAGACTCCTATAGCACAGAACCGCGTGCTGGCTTTAGCCCAAAGGTCCGAATGACTGGCTaGGTCACTGGAACACTTAGA +
Preference number: 5 (lower is better)
Translates to: RETGDSYSTEPRAGFSPKVRMTG*VTGTLR
Trigger: TCTAAGTGTTCCAGTGACCAAGCCAGTCATTCGGAC...CTTTGGGCTAAAGCCAGCACGCGGTTCTGTGCTATAGGAGTCTCCCGTTTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp GCACACCAAGTGTATGGTCTGAATGAGGACACCGGGCTCAGGATATaGGTGTTGTCCACAGGACCGGGGAGGGCTGAATTGCTATGCAAT +
Preference number: 5 (lower is better)
Translates to: AHQVYGLNEDTGLRI*VLSTGPGRAELLCN
Trigger: ATTGCATAGCAATTCAGCCCTCCCCGGTCCTGTGGACAACACTCATATCCTGAGCCCGGTGTCCTCATTCAGACCATACACTTGGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp GGGAGAAACTCTTCCTCTGTGACGAACATTCTTGGAAGGGATCTTTaGCTTGGGGCTTGGCACGTCTCCATTTTCCGAGGGCGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: GRNSSSVTNILGRDL*LGAWHVSIFRGRGV
Trigger: CACACCACGCCCTCGGAAAATGGAGACGTGCCAAGCCCCAAGTCAAAGATCCCTTCCAAGAATGTTCGTCACAGAGGAAGAGTTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp AAAGCACCAAATTCCTGCCAGGAGTTGGAACGATGCCCTCAGAGGTaGGAAAAGCTGACCGAAAGGTGTGGAAATGACTGGCGGACTCAG +
Preference number: 5 (lower is better)
Translates to: KAPNSCQELERCPQR*EKLTERCGNDWRTQ
Trigger: CTGAGTCCGCCAGTCATTTCCACACCTTTCGGTCAGCTTTTCGCACCTCTGAGGGCATCGTTCCAACTCCTGGCAGGAATTTGGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp TGCTTCCCTGGGCAGCCCTGGTGGGCTGACTGTGATATACTGTATTaGAGAAACCATCCGTGGAGTGGTCCAGTGAGTATCTGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: CFPGQPWWADCDILY*RNHPWSGPVSIWQK
Trigger: TTTCTGCCAGATACTCACTGGACCACTCCACGGATGGTTTCTCCAATACAGTATATCACAGTCAGCCCACCAGGGCTGCCCAGGGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp GACTGTGATATCACAAACATATGGCGGCTTGGCAGTAGCCAGTGTTaGTGTGTCGACTGTTGCTTCGAGAGTGAAGGCAGTCACGGGACG +
Preference number: 5 (lower is better)
Translates to: DCDITNIWRLGSSQC*CVDCCFESEGSHGT
Trigger: CGTCCCGTGACTGCCTTCACTCTCGAAGCAACAGTCGACACACCAACACTGGCTACTGCCAAGCCGCCATATGTTTGTGATATCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp TTCCGAGGGCGTGGTGTGGTCCTTCAGAGGTCCTGGCAGTGGCGCTaGCTCATGAATAATCAATATGTCGTCTTTATTGTGCTGACCCAG +
Preference number: 5 (lower is better)
Translates to: FRGRGVVLQRSWQWR*LMNNQYVVFIVLTQ
Trigger: CTGGGTCAGCACAATAAAGACGACATATTGATTATTCATGAGCCAGCGCCACTGCCAGGACCTCTGAAGGACCACACCACGCCCTCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTGAGTATAAAGAAAGGTaGTGCTGTTCCGGAGAGAGC +
Preference number: 5 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLEYKER*CCSGES
Trigger: GCTCTCTCCGGAACAGCACAACCTTTCTTTATACTC...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATAATTCCTGCCAGGAGTaGGAACGATGCCCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNNSCQE*ERCPQR
Trigger: CCTCTGAGGGCATCGTTCCAACTCCTGGCAGGAATT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGTTCCAGCGGGGGTGTaGAGAAAAAGCTGGATGCAA +
Preference number: 5 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFVPAGV*RKSWMQ
Trigger: TTGCATCCAGCTTTTTCTCAACACCCCCGCTGGAAC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTCAGTTAAAATGGGCGTaGTGTGGACAGTGGTCAATG +
Preference number: 5 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLQLKWA*CGQWSM
Trigger: CATTGACCACTGTCCACACAACGCCCATTTTAACTG...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCATGCGCTGGGTGAAGTaGCAGAAGCCAGTATCCACA +
Preference number: 5 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFMRWVK*QKPVST
Trigger: TGTGGATACTGGCTTCTGCAACTTCACCCAGCGCAT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTATCAGGTCCGAAGACTaGACTGCACTGAGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLIRSED*TALSLS
Trigger: AGAAAGACTCAGTGCAGTCAAGTCTTCGGACCTGAT...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCGCAGGCGGATCTTGTaGCGATGGTGCTCGATCTCA +
Preference number: 5 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMRRRIL*RWCSIS
Trigger: TGAGATCGAGCACCATCGCAACAAGATCCGCCTGCG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCGTGGGGTCCAGGATCTaGTCGATCTGCATCTGTGCC +
Preference number: 5 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAVGSRI*SICICA
Trigger: GGCACAGATGCAGATCGACAAGATCCTGGACCCCAC...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGACTGGCTGCCTCTGCTaGGCGGGATTTCCACTGGCT +
Preference number: 5 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKTGCLC*AGFPLA
Trigger: AGCCAGTGGAAATCCCGCCAAGCAGAGGCAGCCAGT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTCTCTCCAATGCTCCTaGGAGCCTCTGAGGATCGCC +
Preference number: 5 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCSLQCS*EPLRIA
Trigger: GGCGATCCTCAGAGGCTCCAAGGAGCATTGGAGAGA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTTTTCGTCCTCTTCCCTaGCCTCCCCCACACTGGAGT +
Preference number: 5 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCFRPLP*PPPHWS
Trigger: ACTCCAGTGTGGGGGAGGCAAGGGAAGAGGACGAAA...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CATCTGATTCTCACAACTACGGTGCCTGGGAGGTGGCGGGGGAGGTCTGTTCTTTGGCCAAACGGCTGCTaGAGATCTGCTCTAAACAAT +
Preference number: 5 (lower is better)
Translates to: HLILTTTVPGRWRGRSVLWPNGC*RSALNN
Trigger: ATTGTTTAGAGCAGATCTCAAGCAGCCGTTTGGCCA...AAGAACAGACCTCCCCCGCCACCTCCCAGGCACCGTAGTTGTGAGAATCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp ATGACGCCCAGGAGAACTGTTCTGACCCAAGAGGACTTCAGCAACTaGGATAAGTTGAGCTGTGGATACTGGAAGGGCTCTGCGATCTGC +
Preference number: 5 (lower is better)
Translates to: MTPRRTVLTQEDFSN*DKLSCGYWKGSAIC
Trigger: GCAGATCGCAGAGCCCTTCCAGTATCCACAGCTCAACTTATCTCAGTTGCTGAAGTCCTCTTGGGTCAGAACAGTTCTCCTGGGCGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp CTTGTGCAGCGCTGTGCCCAGTGCTTTTCTTCAGCACGAGCTCCATaGAGTATAAAGAAAGGTTGTGCTGTTCCGGAGAGAGCTCATCTG +
Preference number: 5 (lower is better)
Translates to: LVQRCAQCFSSARAP*SIKKGCAVPERAHL
Trigger: CAGATGAGCTCTCTCCGGAACAGCACAACCTTTCTTTATACTCCATGGAGCTCGTGCTGAAGAAAAGCACTGGGCACAGCGCTGCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp AAACTCTTCCTCTGTGACGAACATTCTTGGAAGGGATCTTTGACTTaGGGCTTGGCACGTCTCCATTTTCCGAGGGCGTGGTGTGGTCCT +
Preference number: 5 (lower is better)
Translates to: KLFLCDEHSWKGSLT*GLARLHFPRAWCGP
Trigger: AGGACCACACCACGCCCTCGGAAAATGGAGACGTGCCAAGCCCCAAGTCAAAGATCCCTTCCAAGAATGTTCGTCACAGAGGAAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTAGCATATGCCGCTGGTaGTCGCGTTGTGTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCSICRW*SRCVLP
Trigger: TGGCAGAACACAACGCGACAACCAGCGGCATATGCT...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCTGCAATTCGGATGTTTaGCTGGAGTCGCTAGGGAGA +
Preference number: 5 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFCNSDV*LESLGR
Trigger: TCTCCCTAGCGACTCCAGCAAAACATCCGAATTGCA...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGAAGGCAGCTCGGAACTaGGCTGGAGCTGCGAAAACT +
Preference number: 5 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMKAARN*AGAAKT
Trigger: AGTTTTCGCAGCTCCAGCCAAGTTCCGAGCTGCCTT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCAAGGCAGCTCGGAACTaGGCTGGAGCTGCGAAAACT +
Preference number: 5 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAKAARN*AGAAKT
Trigger: AGTTTTCGCAGCTCCAGCCAAGTTCCGAGCTGCCTT...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGATGAGCTGTACCGGATaGTCATCTCCCTCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMMSCTG*SSPSSL
Trigger: GAGGCTGGAGGGAGATGACAATCCGGTACAGCTCAT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCATGAGCTGTACCGGATaGTCATCTCCCTCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: PALLLFQRCPDENWLHLTMSCTG*SSPSSL
Trigger: GAGGCTGGAGGGAGATGACAATCCGGTACAGCTCAT...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCGAAGGGATCTTTGACTaGGGGCTTGGCACGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCEGIFD*GLGTSP
Trigger: TGGAGACGTGCCAAGCCCCAAGTCAAAGATCCCTTC...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGTGGGGTCCAGGATCTaGTCGATCTGCATCTGTGCC +
Preference number: 5 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKVGSRI*SICICA
Trigger: GGCACAGATGCAGATCGACAAGATCCTGGACCCCAC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCCAGGCCCACTCTCAGCTCTTCCTTCCACGCCATTTGCCTGGGTAGCTGCCCTAAGTGCTGCTGGCTTTaGGCCAAAATACATATATTT +
Preference number: 5 (lower is better)
Translates to: PRPTLSSSFHAICLGSCPKCCWL*AKIHIF
Trigger: AAATATATGTATTTTGGCCAAAAGCCAGCAGCACTT...AGGGCAGCTACCCAGGCAAATGGCGTGGAAGGAAGAGCTGAGAGTGGGCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp AACCGCAAAGATGATATTCACCGGGCCCCGCCGAGGAGTCACCCTTaGGGAACTGATGGTGATATTCAAGATCTGCACCGTGAGGTTATA +
Preference number: 5 (lower is better)
Translates to: NRKDDIHRAPPRSHP*GTDGDIQDLHREVI
Trigger: TATAACCTCACGGTGCAGATCTTGAATATCACCATCAGTTCCTCAAGGGTGACTCCTCGGCGGGGCCCGGTGAATATCATCTTTGCGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp CGGGAGCAGTTTCTGTTAAGGCCACTTGTGCAGCGCTGTGCCCAGTaGTTTTCTTCAGCACGAGCTCCATGGAGTATAAAGAAAGGTTGT +
Preference number: 5 (lower is better)
Translates to: REQFLLRPLVQRCAQ*FSSARAPWSIKKGC
Trigger: ACAACCTTTCTTTATACTCCATGGAGCTCGTGCTGAAGAAAAGCACTGGGCACAGCGCTGCACAAGTGGCCTTAACAGAAACTGCTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp CAAATTCAGAGAAGTCTGCTACGACGCTACTCATTAGAGAGATGCTaGTTTCTTCCAGCACGGTCATGCACAGAGTCTCGGCACCATCCC +
Preference number: 5 (lower is better)
Translates to: QIQRSLLRRYSLERC*FLPARSCTESRHHP
Trigger: GGGATGGTGCCGAGACTCTGTGCATGACCGTGCTGGAAGAAAGCAGCATCTCTCTAATGAGTAGCGTCGTAGCAGACTTCTCTGAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp TCCATTTTCCGAGGGCGTGGTGTGGTCCTTCAGAGGTCCTGGCAGTaGCGCTGGCTCATGAATAATCAATATGTCGTCTTTATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: SIFRGRGVVLQRSWQ*RWLMNNQYVVFIVL
Trigger: CAGCACAATAAAGACGACATATTGATTATTCATGAGCCAGCGCCACTGCCAGGACCTCTGAAGGACCACACCACGCCCTCGGAAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp TCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAGCGGATACTTaGCAAATCTGCGAGGCGAGGCCGATCAGCTGTGGAAGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SVDFLLVLLPQEADT*QICEARPISCGSSA
Trigger: TGCAGAACTTCCACAGCTGATCGGCCTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCCGGGGAGGGCTGAATaGCTATGCAATTCGGATGTT +
Preference number: 5 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAPGRAE*LCNSDV
Trigger: AACATCCGAATTGCATAGCAATTCAGCCCTCCCCGG...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCAAACATATGGCGGCTaGGCAGTAGCCAGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMQTYGG*AVASVG
Trigger: ACCAACACTGGCTACTGCCAAGCCGCCATATGTTTG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCCACTTCATTCTGGAGTaGCTTCTCCATGACGCCCAG +
Preference number: 5 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTHFILE*LLHDAQ
Trigger: CTGGGCGTCATGGAGAAGCAACTCCAGAATGAAGTG...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCATGACCCACAAGTTGTaGCTCTGGGATTCCGGAGAC +
Preference number: 5 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAMTHKL*LWDSGD
Trigger: GTCTCCGGAATCCCAGAGCAACAACTTGTGGGTCAT...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTTCTTGGAAGGGATCTTaGACTTGGGGCTTGGCACGT +
Preference number: 5 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCSWKGS*TWGLAR
Trigger: ACGTGCCAAGCCCCAAGTCAAAGATCCCTTCCAAGA...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTGGGACCTGCCATCGTaGACGGCTCCCGGCGTCTTA +
Preference number: 5 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMWDLPS*TAPGVL
Trigger: TAAGACGCCGGGAGCCGTCAACGATGGCAGGTCCCA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTGCGCGCAGGCGGATCTaGTTGCGATGGTGCTCGATC +
Preference number: 5 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPARRRI*LRWCSI
Trigger: GATCGAGCACCATCGCAACAAGATCCGCCTGCGCGC...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTGTTTCCGGCGAGGCTaGGGAGAACGTTTTATCCGT +
Preference number: 5 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCCFRRG*GERFIR
Trigger: ACGGATAAAACGTTCTCCCAAGCCTCGCCGGAAACA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGATTTCCTTTTGGTCTaGCTTCCACAGGAAGCGGAT +
Preference number: 5 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFDFLLV*LPQEAD
Trigger: ATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAATC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCGGGGGAGGTCTGTTCTaGTTTGGCTTATGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAGGGLF*FGLWGE
Trigger: TTCTCCCCATAAGCCAAACAAGAACAGACCTCCCCC...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp CTTTGGAGAAAGAGGCCAGGACAGACACGTGACCGTCTAGAGCACTaGTTTGGTCGTCAGGAGGTGTCAGAGTTGAGAACAAAGAAGACT +
Preference number: 5 (lower is better)
Translates to: LWRKRPGQTRDRLEH*FGRQEVSELRTKKT
Trigger: AGTCTTCTTTGTTCTCAACTCTGACACCTCCTGACGACCAAATCAGTGCTCTAGACGGTCACGTGTCTGTCCTGGCCTCTTTCTCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp CCTCAAATTCAGAGAAGTCTGCTACGACGCTACTCATTAGAGAGATaGTGCTTTCTTCCAGCACGGTCATGCACAGAGTCTCGGCACCAT +
Preference number: 5 (lower is better)
Translates to: PQIQRSLLRRYSLER*CFLPARSCTESRHH
Trigger: ATGGTGCCGAGACTCTGTGCATGACCGTGCTGGAAGAAAGCAGCATCTCTCTAATGAGTAGCGTCGTAGCAGACTTCTCTGAATTTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp AGTTGTGATCAGATAGGCATCGGGGACTGTGATATCACAAACATATaGCGGCTTGGCAGTAGCCAGTGTTGGTGTGTCGACTGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: SCDQIGIGDCDITNI*RLGSSQCWCVDCCF
Trigger: GAAGCAACAGTCGACACACCAACACTGGCTACTGCCAAGCCGCCATATGTTTGTGATATCACAGTCCCCGATGCCTATCTGATCACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCTCCATCTCATCGTCATaGACGGCCACCTCTTTACTC +
Preference number: 5 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTSISSS*TATSLL
Trigger: GAGTAAAGAGGTGGCCGTCAATGACGATGAGATGGA...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCGCGAAAACTCAAGATTaGTGGAACTGGGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFAKTQD*WNWEET
Trigger: TGTCTCTTCCCAGTTCCACAAATCTTGAGTTTTCGC...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCAATCAGAAGGGAAGCTaGACCATGGTGACACCTCAG +
Preference number: 5 (lower is better)
Translates to: PALLLFQRCPDENWLHLTNQKGS*TMVTPQ
Trigger: CTGAGGTGTCACCATGGTCAAGCTTCCCTTCTGATT...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGTGGTCAATGGTGATGTaGCTTGAATCCCGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMWSMVM*LESRQS
Trigger: TGACTGCCGGGATTCAAGCAACATCACCATTGACCA...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGCACTTCATTCTGGAGTaGCTTCTCCATGACGCCCAG +
Preference number: 5 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMHFILE*LLHDAQ
Trigger: CTGGGCGTCATGGAGAAGCAACTCCAGAATGAAGTG...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCGCGTTCCATCTCGGCTaGAAACACTTCATTCTGGAG +
Preference number: 5 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTAFHLG*KHFILE
Trigger: CTCCAGAATGAAGTGTTTCAAGCCGAGATGGAACGC...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCACAATGACCCACAAGTaGTTGCTCTGGGATTCCGGA +
Preference number: 5 (lower is better)
Translates to: PALLLFQRCPDENWLHLTTMTHK*LLWDSG
Trigger: TCCGGAATCCCAGAGCAACAACTTGTGGGTCATTGT...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCACAATGACCCACAAGTaGTTGCTCTGGGATTCCGGA +
Preference number: 5 (lower is better)
Translates to: LNVLERLTLLHSFSFRGATMTHK*LLWDSG
Trigger: TCCGGAATCCCAGAGCAACAACTTGTGGGTCATTGT...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGTCTTTGACTTGGGGCTaGGCACGTCTCCATTTTCCG +
Preference number: 5 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKSLTWG*ARLHFP
Trigger: CGGAAAATGGAGACGTGCCAAGCCCCAAGTCAAAGA...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGTCTTGGAAGGGATCTTaGACTTGGGGCTTGGCACGT +
Preference number: 5 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMSWKGS*TWGLAR
Trigger: ACGTGCCAAGCCCCAAGTCAAAGATCCCTTCCAAGA...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATGGCCAAAACCTGGTCTaGGCAATGGACCCGTCGGGG +
Preference number: 5 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHGQNLV*AMDPSG
Trigger: CCCCGACGGGTCCATTGCCAAGACCAGGTTTTGGCC...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAACAGGAAGCGGATACTaGGCAAATCTGCGAGGCGAG +
Preference number: 5 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQETGSGY*ANLRGE
Trigger: CTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTGT...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTGCTGCTGGTCCTTTGTaGAACGTCCTTGAGAGACTT +
Preference number: 5 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCAAGPL*NVLERL
Trigger: AAGTCTCTCAAGGACGTTCAACAAAGGACCAGCAGC...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCGCTGCTGGTCCTTTGTaGAACGTCCTTGAGAGACTT +
Preference number: 5 (lower is better)
Translates to: PALLLFQRCPDENWLHLTAAGPL*NVLERL
Trigger: AAGTCTCTCAAGGACGTTCAACAAAGGACCAGCAGC...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACGATGCTGCTGGTCCTTaGTTGAACGTCCTTGAGAGA +
Preference number: 5 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDDAAGP*LNVLER
Trigger: TCTCTCAAGGACGTTCAACAAAGGACCAGCAGCATC...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGGGGGGAGGTCTGTTCTaGTTTGGCTTATGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKGGGLF*FGLWGE
Trigger: TTCTCCCCATAAGCCAAACAAGAACAGACCTCCCCC...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCGTCCGAATGACTGGCTaGGTCACTGGAACACTTAGA +
Preference number: 5 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCVRMTG*VTGTLR
Trigger: TCTAAGTGTTCCAGTGACCAAGCCAGTCATTCGGAC...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp TCACTTCAAAGAGAGCTGTCATTAGGCCTTTCTCAATGCGCTGGGTaGAGTTGCAGAAGCCAGTATCCACACTCGGAGGCACAAACTGAA +
Preference number: 5 (lower is better)
Translates to: SLQRELSLGLSQCAG*SCRSQYPHSEAQTE
Trigger: TTCAGTTTGTGCCTCCGAGTGTGGATACTGGCTTCTGCAACTTCACCCAGCGCATTGAGAAAGGCCTAATGACAGCTCTCTTTGAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp AGGCTGGGCAATGACACCTTGAATTCGGTAACCCAAGATGATGGCTaGTCTCTGGAGGTCCATTTTGTTAATCAGGTCCGAAGACTTGAC +
Preference number: 5 (lower is better)
Translates to: RLGNDTLNSVTQDDG*SLEVHFVNQVRRLD
Trigger: GTCAAGTCTTCGGACCTGATTAACAAAATGGACCTCCAGAGAGCAGCCATCATCTTGGGTTACCGAATTCAAGGTGTCATTGCCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp CCCTGGTGGGCTGACTGTGATATACTGTATTGGAGAAACCATCCGTaGAGTGGTCCAGTGAGTATCTGGCAGAAAGTTATCCATCTCATC +
Preference number: 5 (lower is better)
Translates to: PWWADCDILYWRNHP*SGPVSIWQKVIHLI
Trigger: GATGAGATGGATAACTTTCTGCCAGATACTCACTGGACCACTCCACGGATGGTTTCTCCAATACAGTATATCACAGTCAGCCCACCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp CTAGGTAGCAACATGATGGTGTTTAAAGGCAGCTCGGAACTTGGCTaGAGCTGCGAAAACTCAAGATTTGTGGAACTGGGAAGAGACAGC +
Preference number: 5 (lower is better)
Translates to: LGSNMMVFKGSSELG*SCENSRFVELGRDS
Trigger: GCTGTCTCTTCCCAGTTCCACAAATCTTGAGTTTTCGCAGCTCCAGCCAAGTTCCGAGCTGCCTTTAAACACCATCATGTTGCTACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp TTTCTCACTTCAAAGAGAGCTGTCATTAGGCCTTTCTCAATGCGCTaGGTGAAGTTGCAGAAGCCAGTATCCACACTCGGAGGCACAAAC +
Preference number: 5 (lower is better)
Translates to: FLTSKRAVIRPFSMR*VKLQKPVSTLGGTN
Trigger: GTTTGTGCCTCCGAGTGTGGATACTGGCTTCTGCAACTTCACCCAGCGCATTGAGAAAGGCCTAATGACAGCTCTCTTTGAAGTGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCAGCGACGGTGTGTTTTaGTTTGCTATGACAGAGAAA +
Preference number: 5 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFSDGVF*FAMTEK
Trigger: TTTCTCTGTCATAGCAAACAAAAACACACCGTCGCT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGTGGTCAATGGTGATGTaGCTTGAATCCCGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMWSMVM*LESRQS
Trigger: TGACTGCCGGGATTCAAGCAACATCACCATTGACCA...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCCAGTTAAAATGGGCGTaGTGTGGACAGTGGTCAATG +
Preference number: 5 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAQLKWA*CGQWSM
Trigger: CATTGACCACTGTCCACACAACGCCCATTTTAACTG...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGAAGTACTGTTTGAACTaGGAACCTGGACTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMKYCLN*EPGLWH
Trigger: GTGCCAGAGTCCAGGTTCCAAGTTCAAACAGTACTT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCCTGGGCAATGACACCTaGAATTCGGTAACCCAAGAT +
Preference number: 5 (lower is better)
Translates to: PALLLFQRCPDENWLHLTLGNDT*NSVTQD
Trigger: ATCTTGGGTTACCGAATTCAAGGTGTCATTGCCCAG...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAATGACCCACAAGTTGTaGCTCTGGGATTCCGGAGAC +
Preference number: 5 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEMTHKL*LWDSGD
Trigger: GTCTCCGGAATCCCAGAGCAACAACTTGTGGGTCAT...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTATCTACTGCAGGGATaGTTGGCCGTCTGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMYLLQG*LAVWAG
Trigger: CCCAGCCCAGACGGCCAACAATCCCTGCAGTAGATA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCCCTGCCTGAAGTCCTaGGCACCTGAAATAGCGGTG +
Preference number: 5 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPPCLKS*APEIAV
Trigger: CACCGCTATTTCAGGTGCCAAGGACTTCAGGCAGGG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422774.2
CDS-3UTR CAA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTCCTCGCGGATTGCTTaGATGAGAGAGGCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMSSRIA*MREAEE
Trigger: CTCCTCGGCCTCTCTCATCAAAGCAATCCGCGAGGA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAACAGGAAGCGGATACTaGGCAAATCTGCGAGGCGAG +
Preference number: 5 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRTGSGY*ANLRGE
Trigger: CTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTGT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGATCCCACAGAAACGCTaGGTTCCTTTCATCCCTATG +
Preference number: 5 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMIPQKR*VPFIPM
Trigger: CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGAT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCACTCTCTCCTTTCCCTaGGGGTCTCAAAGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: PALLLFQRCPDENWLHLTTLSFP*GSQSSF
Trigger: AAAAGAGCTTTGAGACCCCAAGGGAAAGGAGAGAGT...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGACTCTCTCCTTTCCCTaGGGGTCTCAAAGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMTLSFP*GSQSSF
Trigger: AAAAGAGCTTTGAGACCCCAAGGGAAAGGAGAGAGT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTTTCGTCCTCTTCCCTaGCCTCCCCCACACTGGAGT +
Preference number: 5 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMFRPLP*PPPHWS
Trigger: ACTCCAGTGTGGGGGAGGCAAGGGAAGAGGACGAAA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AGCTGCCCTGCCTTCAAAGTCACTTCAGAAGTTGACGTCTCCCCAAGATATTGCTGGCCAAACGGCTGCTaGAGATCTGCTCTAAACAAT +
Preference number: 5 (lower is better)
Translates to: SCPAFKVTSEVDVSPRYCWPNGC*RSALNN
Trigger: ATTGTTTAGAGCAGATCTCAAGCAGCCGTTTGGCCA...GCAATATCTTGGGGAGACGTCAACTTCTGAAGTGACTTTGAAGGCAGGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATATATGCGACTTGAACTaGGCCCTGTACTATTCCCAA +
Preference number: 5 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNICDLN*ALYYSQ
Trigger: TTGGGAATAGTACAGGGCCAAGTTCAAGTCGCATAT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp TGGTCCAGTGAGTATCTGGCAGAAAGTTATCCATCTCATCGTCATTaGCGGCCACCTCTTTACTCGTCACTGACACGTAAGTTGCCACAA +
Preference number: 5 (lower is better)
Translates to: WSSEYLAESYPSHRH*RPPLYSSLTRKLPQ
Trigger: TTGTGGCAACTTACGTGTCAGTGACGAGTAAAGAGGTGGCCGTCAATGACGATGAGATGGATAACTTTCTGCCAGATACTCACTGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp CAGTTCCACTGCACGGTTGAAGTGAATCCTCAGTACTTCTTTGATTaGTGTAATGATGTACTCCTGCACAGCTCTTCTGGCCAGCACAGT +
Preference number: 5 (lower is better)
Translates to: QFHCTVEVNPQYFFD*CNDVLLHSSSGQHS
Trigger: ACTGTGCTGGCCAGAAGAGCTGTGCAGGAGTACATCATTACAGCAATCAAAGAAGTACTGAGGATTCACTTCAACCGTGCAGTGGAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGGAGTATAAAGAAAGGTaGTGCTGTTCCGGAGAGAGC +
Preference number: 5 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMEYKER*CCSGES
Trigger: GCTCTCTCCGGAACAGCACAACCTTTCTTTATACTC...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGCTGGCAGAGTCCTGCTaGATAAATGACTGTAAGCAT +
Preference number: 5 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMLAESC*INDCKH
Trigger: ATGCTTACAGTCATTTATCAAGCAGGACTCTGCCAG...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCAGTGGGGTATGTTCTaGGAGAGATGGTTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCQWGMF*ERWFLL
Trigger: TAGAAGAAACCATCTCTCCAAGAACATACCCCACTG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTGCAGAGGGAAGGGGGTaGCTTCAGAAACAAACGAGG +
Preference number: 5 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPAEGRG*LQKQTR
Trigger: CCTCGTTTGTTTCTGAAGCAACCCCCTTCCCTCTGC...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGATCAGGTCCGAAGACTaGACTGCACTGAGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKIRSED*TALSLS
Trigger: AGAAAGACTCAGTGCAGTCAAGTCTTCGGACCTGAT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGGATTTCCTTTTGGTCTaGCTTCCACAGGAAGCGGAT +
Preference number: 5 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMDFLLV*LPQEAD
Trigger: ATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAATC...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAGTCACACCGAGCTTTCGGTTTTGCTCATTACCCATGTGTGAACCCATTCACCATGGCATCTTCTAAATaGCAACTTGCTCCCTCCCTT +
Preference number: 5 (lower is better)
Translates to: ESHRAFGFAHYPCVNPFTMASSK*QLAPSL
Trigger: AAGGGAGGGAGCAAGTTGCAATTTAGAAGATGCCAT...GGTGAATGGGTTCACACATGGGTAATGAGCAAAACCGAAAGCTCGGTGTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAATGCGGGTGATGGCTTaGTTTGGAGTCATCAGGCTC +
Preference number: 5 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRMRVMA*FGVIRL
Trigger: GAGCCTGATGACTCCAAACAAAGCCATCACCCGCAT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCTGCACTCCTTCTCTTTCAGAGGTGCCCAGATGAAAACTGGCTACATCTTACCGGCCATTTATCCCGTTaGCTGTCACACGATTTGAAT +
Preference number: 5 (lower is better)
Translates to: PALLLFQRCPDENWLHLTGHLSR*LSHDLN
Trigger: ATTCAAATCGTGTGACAGCAAACGGGATAAATGGCC...GGTAAGATGTAGCCAGTTTTCATCTGGGCACCTCTGAAAGAGAAGGAGTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCGTCTCCCCAAGATATaGCATTTCCAAACATGCAAC +
Preference number: 5 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCRLPKI*HFQTCN
Trigger: GTTGCATGTTTGGAAATGCAATATCTTGGGGAGACG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGCCCTGGTCGTTTCCTaGCTGCATGACTGCAAAAGC +
Preference number: 5 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMALVVS*LHDCKS
Trigger: GCTTTTGCAGTCATGCAGCAAGGAAACGACCAGGGC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACTACAGCATATGCGACTaGAACTTGGCCCTGTACTAT +
Preference number: 5 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDYSICD*NLALYY
Trigger: ATAGTACAGGGCCAAGTTCAAGTCGCATATGCTGTA...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTTACAGCATATGCGACTaGAACTTGGCCCTGTACTAT +
Preference number: 5 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCYSICD*NLALYY
Trigger: ATAGTACAGGGCCAAGTTCAAGTCGCATATGCTGTA...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTACAGTTGGCCTCAATTaGCTCTGCACATTTCGTACA +
Preference number: 5 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCTVGLN*LCTFRT
Trigger: TGTACGAAATGTGCAGAGCAAATTGAGGCCAACTGT...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp GTTATCCATCTCATCGTCATTGACGGCCACCTCTTTACTCGTCACTaGCACGTAAGTTGCCACAAAGATGCTGGGATCTGCTGTACTTTT +
Preference number: 5 (lower is better)
Translates to: VIHLIVIDGHLFTRH*HVSCHKDAGICCTF
Trigger: AAAAGTACAGCAGATCCCAGCATCTTTGTGGCAACTTACGTGTCAGTGACGAGTAAAGAGGTGGCCGTCAATGACGATGAGATGGATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp ACTGTGATATACTGTATTGGAGAAACCATCCGTGGAGTGGTCCAGTaGGTATCTGGCAGAAAGTTATCCATCTCATCGTCATTGACGGCC +
Preference number: 5 (lower is better)
Translates to: TVIYCIGETIRGVVQ*VSGRKLSISSSLTA
Trigger: GGCCGTCAATGACGATGAGATGGATAACTTTCTGCCAGATACTCACTGGACCACTCCACGGATGGTTTCTCCAATACAGTATATCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp GTCACAGTGGGGTATGTTCTTGGAGAGATGGTTTCTTCTAGGCTTTaGCTCAACACAGTGGTCACATCAGTGTATCTGTCTGCACTTGTG +
Preference number: 5 (lower is better)
Translates to: VTVGYVLGEMVSSRL*LNTVVTSVYLSALV
Trigger: CACAAGTGCAGACAGATACACTGATGTGACCACTGTGTTGAGTCAAAGCCTAGAAGAAACCATCTCTCCAAGAACATACCCCACTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp AACACTACTCATATCCACCTCGGCAGAAATGCCAACACTCGTCTCTaGGATTTCCATGGATCTAGAAGAAAGTGGGACGATAGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: NTTHIHLGRNANTRL*DFHGSRRKWDDRSG
Trigger: TCCAGACCTATCGTCCCACTTTCTTCTAGATCCATGGAAATCTCAGAGACGAGTGTTGGCATTTCTGCCGAGGTGGATATGAGTAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp ATACTGTATTGGAGAAACCATCCGTGGAGTGGTCCAGTGAGTATCTaGCAGAAAGTTATCCATCTCATCGTCATTGACGGCCACCTCTTT +
Preference number: 5 (lower is better)
Translates to: ILYWRNHPWSGPVSI*QKVIHLIVIDGHLF
Trigger: AAAGAGGTGGCCGTCAATGACGATGAGATGGATAACTTTCTGCCAGATACTCACTGGACCACTCCACGGATGGTTTCTCCAATACAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp ATGTTCTTGGAGAGATGGTTTCTTCTAGGCTTTGACTCAACACAGTaGTCACATCAGTGTATCTGTCTGCACTTGTGGCCCAAACCTCCT +
Preference number: 5 (lower is better)
Translates to: MFLERWFLLGFDSTQ*SHQCICLHLWPKPP
Trigger: AGGAGGTTTGGGCCACAAGTGCAGACAGATACACTGATGTGACCACTGTGTTGAGTCAAAGCCTAGAAGAAACCATCTCTCCAAGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATAGCATATGCCGCTGGTaGTCGCGTTGTGTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHSICRW*SRCVLP
Trigger: TGGCAGAACACAACGCGACAACCAGCGGCATATGCT...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATAATTCCTGCCAGGAGTaGGAACGATGCCCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHNSCQE*ERCPQR
Trigger: CCTCTGAGGGCATCGTTCCAACTCCTGGCAGGAATT...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTGTATCTGTCTGCACTaGTGGCCCAAACCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMCICLH*WPKPPL
Trigger: CAGAGGAGGTTTGGGCCACAAGTGCAGACAGATACA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGATGCAATTCGGATGTTTaGCTGGAGTCGCTAGGGAGA +
Preference number: 5 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRCNSDV*LESLGR
Trigger: TCTCCCTAGCGACTCCAGCAAAACATCCGAATTGCA...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGCTGGATGGCGTCACTaGGGTTTCAGCAACAGACAA +
Preference number: 5 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMAGWRH*GFSNRQ
Trigger: TTGTCTGTTGCTGAAACCCAAGTGACGCCATCCAGC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGAAACTGAAGTACTGTTaGAACTTGGAACCTGGACTC +
Preference number: 5 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMKLKYC*NLEPGL
Trigger: GAGTCCAGGTTCCAAGTTCAAACAGTACTTCAGTTT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAATGGGACCTGCCATCGTaGACGGCTCCCGGCGTCTTA +
Preference number: 5 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEWDLPS*TAPGVL
Trigger: TAAGACGCCGGGAGCCGTCAACGATGGCAGGTCCCA...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAATCGGCAGGACAGCCGTaGACCTGGTGTTTCCGGCGA +
Preference number: 5 (lower is better)
Translates to: NLQHILPLKKPKFHFRHESAGQP*TWCFRR
Trigger: TCGCCGGAAACACCAGGTCAACGGCTGTCCTGCCGA...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGATGGCATCTTCTAAATaGCAACTTGCTCCCTCCCTT +
Preference number: 5 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMMASSK*QLAPSL
Trigger: AAGGGAGGGAGCAAGTTGCAATTTAGAAGATGCCAT...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTAAGACCGGAGTCCTCCTTCCCCTGTGCCCAAAACGTTACCCAGCTTTCCTTCAAGTGCTGCTGGCTTTaGGCCAAAATACATATATTT +
Preference number: 5 (lower is better)
Translates to: LRPESSFPCAQNVTQLSFKCCWL*AKIHIF
Trigger: AAATATATGTATTTTGGCCAAAAGCCAGCAGCACTT...GAAGGAAAGCTGGGTAACGTTTTGGGCACAGGGGAAGGAGGACTCCGGTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGATGCGGGTGATGGCTTaGTTTGGAGTCATCAGGCTC +
Preference number: 5 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMMRVMA*FGVIRL
Trigger: GAGCCTGATGACTCCAAACAAAGCCATCACCCGCAT...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GTACACGTACCAGTCTCAATCCCACAGAAACGCTTGGTTCCTTTCATCCCTATGGGCCATTTATCCCGTTaGCTGTCACACGATTTGAAT +
Preference number: 5 (lower is better)
Translates to: VHVPVSIPQKRLVPFIPMGHLSR*LSHDLN
Trigger: ATTCAAATCGTGTGACAGCAAACGGGATAAATGGCC...CATAGGGATGAAAGGAACCAAGCGTTTCTGTGGGATTGAGACTGGTACGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATCAATGTACCATGATGTaGCGATTTCCAAGTCATCTT +
Preference number: 5 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNQCTMM*RFPSHL
Trigger: AAGATGACTTGGAAATCGCAACATCATGGTACATTG...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CTGTTGTGGCAGGCGTCGAGAGGAAGCAAGTACAAACTGTGTGTGCTTTATGACTACTGGCTCCTAACTTaGTTTCATGTTTCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: LLWQASRGSKYKLCVLYDYWLLT*FHVSKG
Trigger: GCCTTTGGAAACATGAAACAAAGTTAGGAGCCAGTA...GTCATAAAGCACACACAGTTTGTACTTGCTTCCTCTCGACGCCTGCCACAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGATATGCGACTTGAACTaGGCCCTGTACTATTCCCAA +
Preference number: 5 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKICDLN*ALYYSQ
Trigger: TTGGGAATAGTACAGGGCCAAGTTCAAGTCGCATAT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGACTTCTTTCCCCACATTaGCAGGAGGAACAGTACAGC +
Preference number: 5 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRLLSPH*QEEQYS
Trigger: GCTGTACTGTTCCTCCTGCAAATGTGGGGAAAGAAG...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGACAGTTGGCCTCAATTaGCTCTGCACATTTCGTACA +
Preference number: 5 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKTVGLN*LCTFRT
Trigger: TGTACGAAATGTGCAGAGCAAATTGAGGCCAACTGT...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp CTAGAGTCAAACAATGTAAATGTCTCAACCAAGGGAGAAAAAGACTaGGATGTGAAGGGGGACAAGTCACTCGGCATCAGAGACAGAGAC +
Preference number: 5 (lower is better)
Translates to: LESNNVNVSTKGEKD*DVKGDKSLGIRDRD
Trigger: GTCTCTGTCTCTGATGCCGAGTGACTTGTCCCCCTTCACATCTCAGTCTTTTTCTCCCTTGGTTGAGACATTTACATTGTTTGACTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp TGCTCTCTGGAGGTCCATTTTGTTAATCAGGTCCGAAGACTTGACTaGACTGAGTCTTTCTCCATCTTGATCCTCCACAAAGTAGATGAG +
Preference number: 5 (lower is better)
Translates to: CSLEVHFVNQVRRLD*TESFSILILHKVDE
Trigger: CTCATCTACTTTGTGGAGGATCAAGATGGAGAAAGACTCAGTGCAGTCAAGTCTTCGGACCTGATTAACAAAATGGACCTCCAGAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTTCCATCTCATCGTCATaGACGGCCACCTCTTTACTC +
Preference number: 5 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPSISSS*TATSLL
Trigger: GAGTAAAGAGGTGGCCGTCAATGACGATGAGATGGA...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATATCCTCAGTACTTCTTaGATTGCTGTAATGATGTAC +
Preference number: 5 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNILSTS*IAVMMY
Trigger: GTACATCATTACAGCAATCAAAGAAGTACTGAGGAT...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGACTGGGCAATGACACCTaGAATTCGGTAACCCAAGAT +
Preference number: 5 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRLGNDT*NSVTQD
Trigger: ATCTTGGGTTACCGAATTCAAGGTGTCATTGCCCAG...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACATGAAGGTGAAGGGCCCTTGGAGCTGTAGCACCAGAAGAAGGAGGAAGAATGCTCTTTTACATTTCTaGATTCATTACAGAGAGGCT +
Preference number: 5 (lower is better)
Translates to: DMKVKGPWSCSTRRRRKNALLHF*IHYREA
Trigger: AGCCTCTCTGTAATGAATCAAGAAATGTAAAAGAGC...ATTCTTCCTCCTTCTTCTGGTGCTACAGCTCCAAGGGCCCTTCACCTTCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAGTACAATCTAGGATGTaGGCACAGCAACAAAACAGC +
Preference number: 5 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEVQSRM*AQQQNS
Trigger: GCTGTTTTGTTGCTGTGCCAACATCCTAGATTGTAC...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCTCCAGTGATTACACTTaGGAAACCTGTTTTAGCTGT +
Preference number: 5 (lower is better)
Translates to: LNVLERLTLLHSFSFRGASSDYT*ETCFSC
Trigger: ACAGCTAAAACAGGTTTCCAAAGTGTAATCACTGGA...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp ACTGAACCCAAGTGTTCAGACAATTGCCAGCCCAGTGAAAGGCTCATGAGCTGTCAATGTACCATGATGTaGCGATTTCCAAGTCATCTT +
Preference number: 5 (lower is better)
Translates to: TEPKCSDNCQPSERLMSCQCTMM*RFPSHL
Trigger: AAGATGACTTGGAAATCGCAACATCATGGTACATTG...ACAGCTCATGAGCCTTTCACTGGGCTGGCAATTGTCTGAACACTTGGGTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCTTCTTTCCCCACATTaGCAGGAGGAACAGTACAGC +
Preference number: 5 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPLLSPH*QEEQYS
Trigger: GCTGTACTGTTCCTCCTGCAAATGTGGGGAAAGAAG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATAATCAGAAGGGAAGCTaGACCATGGTGACACCTCAG +
Preference number: 5 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHNQKGS*TMVTPQ
Trigger: CTGAGGTGTCACCATGGTCAAGCTTCCCTTCTGATT...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CACACGCTGTCAACGCAAGGACCCTTCCTTTCAGTGGATGACGTGAACTTAATGATCCTCAGTACTTCTTaGATTGCTGTAATGATGTAC +
Preference number: 5 (lower is better)
Translates to: HTLSTQGPFLSVDDVNLMILSTS*IAVMMY
Trigger: GTACATCATTACAGCAATCAAAGAAGTACTGAGGAT...CATTAAGTTCACGTCATCCACTGAAAGGAAGGGTCCTTGCGTTGACAGCGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TTGAACGTCCTTGAGAGACTTACTCTCCTGCACTCCTTCTCTTTCAGAGGTGCCGCTCTTTTACATTTCTaGATTCATTACAGAGAGGCT +
Preference number: 5 (lower is better)
Translates to: LNVLERLTLLHSFSFRGAALLHF*IHYREA
Trigger: AGCCTCTCTGTAATGAATCAAGAAATGTAAAAGAGC...GGCACCTCTGAAAGAGAAGGAGTGCAGGAGAGTAAGTCTCTCAAGGACGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAAAAACAGAACAGCCCTaGCCACTGTTTTCTTTACCA +
Preference number: 5 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEKTEQP*PLFSLP
Trigger: TGGTAAAGAAAACAGTGGCAAGGGCTGTTCTGTTTT...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACTCCCTCAATAGTGCAGTCGGGGATTCTGTCCCCATATCAAAGCAGATCAAGTCCAGTGATTACACTTaGGAAACCTGTTTTAGCTGT +
Preference number: 5 (lower is better)
Translates to: NSLNSAVGDSVPISKQIKSSDYT*ETCFSC
Trigger: ACAGCTAAAACAGGTTTCCAAAGTGTAATCACTGGA...CTTGATCTGCTTTGATATGGGGACAGAATCCCCGACTGCACTATTGAGGGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp CCTCTTCCAAACACCCACTCAGTTGATTTCCTTTTGGTCTTGCTTCCACAGGAAAAGTCACTTCAGAAGTaGACGTCTCCCCAAGATATT +
Preference number: 5 (lower is better)
Translates to: PLPNTHSVDFLLVLLPQEKSLQK*TSPQDI
Trigger: AATATCTTGGGGAGACGTCAACTTCTGAAGTGACTT...TTCCTGTGGAAGCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTGGAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp TGGAGCTGCGAAAACTCAAGATTTGTGGAACTGGGAAGAGACAGCTaGGATGACTGCAGATCACTAGAGTCAAACAATGTAAATGTCTCA +
Preference number: 5 (lower is better)
Translates to: WSCENSRFVELGRDS*DDCRSLESNNVNVS
Trigger: TGAGACATTTACATTGTTTGACTCTAGTGATCTGCAGTCATCTCAGCTGTCTCTTCCCAGTTCCACAAATCTTGAGTTTTCGCAGCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCTGGCAGAGTCCTGCTaGATAAATGACTGTAAGCAT +
Preference number: 5 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPLAESC*INDCKH
Trigger: ATGCTTACAGTCATTTATCAAGCAGGACTCTGCCAG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GACTATGCCATAGAAATGTGTTTTGTGTTCACATGCTCTGTCTGCCGGTACAGAAGCGACGGTGTGTTTTaGTTTGCTATGACAGAGAAA +
Preference number: 5 (lower is better)
Translates to: DYAIEMCFVFTCSVCRYRSDGVF*FAMTEK
Trigger: TTTCTCTGTCATAGCAAACAAAAACACACCGTCGCT...TCTGTACCGGCAGACAGAGCATGTGAACACAAAACACATTTCTATGGCATAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGGCGAAAACTCAAGATTaGTGGAACTGGGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMAKTQD*WNWEET
Trigger: TGTCTCTTCCCAGTTCCACAAATCTTGAGTTTTCGC...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp TACATTAACGCTCATAATCTAGGGATGAGTGTGCAGGAAGAGCCAGAAAAACATAAGTACTGTTTGAACTaGGAACCTGGACTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: YINAHNLGMSVQEEPEKHKYCLN*EPGLWH
Trigger: GTGCCAGAGTCCAGGTTCCAAGTTCAAACAGTACTT...ATGTTTTTCTGGCTCTTCCTGCACACTCATCCCTAGATTATGAGCGTTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AGGTTCTGTGTAATCAGGGACTGCAAGAGACTCAAGTCACTCAAAATTTCACCTCAAACACCCACTCAGTaGATTTCCTTTTGGTCTTGC +
Preference number: 5 (lower is better)
Translates to: RFCVIRDCKRLKSLKISPQTPTQ*ISFWSC
Trigger: GCAAGACCAAAAGGAAATCAACTGAGTGGGTGTTTG...AGGTGAAATTTTGAGTGACTTGAGTCTCTTGCAGTCCCTGATTACACAGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 90 bp CTGCGAAAACTCAAGATTTGTGGAACTGGGAAGAGACAGCTGAGATaGCTGCAGATCACTAGAGTCAAACAATGTAAATGTCTCAACCAA +
Preference number: 5 (lower is better)
Translates to: LRKLKICGTGKRQLR*LQITRVKQCKCLNQ
Trigger: TTGGTTGAGACATTTACATTGTTTGACTCTAGTGATCTGCAGTCATCTCAGCTGTCTCTTCCCAGTTCCACAAATCTTGAGTTTTCGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 90 bp GTCACGGACAAGCTTACTGTTTATAAGCACATTTATGACGGATATTaGCGTGTAAACGAAAGGACCGGATGTTACCAGAAAAGTGAAGTC +
Preference number: 5 (lower is better)
Translates to: VTDKLTVYKHIYDGY*RVNERTGCYQKSEV
Trigger: GACTTCACTTTTCTGGTAACATCCGGTCCTTTCGTTTACACGGCAATATCCGTCATAAATGTGCTTATAAACAGTAAGCTTGTCCGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 90 bp TCTGGCACAAGGAAAGAAGGTTTCACAGACAGGATTAAAGGAGTCTaGTCACGGACAAGCTTACTGTTTATAAGCACATTTATGACGGAT +
Preference number: 5 (lower is better)
Translates to: SGTRKEGFTDRIKGV*SRTSLLFISTFMTD
Trigger: ATCCGTCATAAATGTGCTTATAAACAGTAAGCTTGTCCGTGACCAGACTCCTTTAATCCTGTCTGTGAAACCTTCTTTCCTTGTGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAGCTGGATGGCGTCACTaGGGTTTCAGCAACAGACAA +
Preference number: 5 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEAGWRH*GFSNRQ
Trigger: TTGTCTGTTGCTGAAACCCAAGTGACGCCATCCAGC...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp GAACCCTCTTTCTGCAATGCTCAAAGGAGGTTACCATTTTTAGCACACTCTATGTACTGGCTCCTAACTTaGTTTCATGTTTCCAAAGGC +
Preference number: 5 (lower is better)
Translates to: EPSFCNAQRRLPFLAHSMYWLLT*FHVSKG
Trigger: GCCTTTGGAAACATGAAACAAAGTTAGGAGCCAGTA...CATAGAGTGTGCTAAAAATGGTAACCTCCTTTGAGCATTGCAGAAAGAGGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAACTCTGGAGGTCCATTTaGTTAATCAGGTCCGAAGAC +
Preference number: 5 (lower is better)
Translates to: NLQHILPLKKPKFHFRHELWRSI*LIRSED
Trigger: GTCTTCGGACCTGATTAACAAAATGGACCTCCAGAG...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAACAGTGGGGTATGTTCTaGGAGAGATGGTTTCTTCTA +
Preference number: 5 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEQWGMF*ERWFLL
Trigger: TAGAAGAAACCATCTCTCCAAGAACATACCCCACTG...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAAAACTGAAGTACTGTTaGAACTTGGAACCTGGACTC +
Preference number: 5 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEKLKYC*NLEPGL
Trigger: GAGTCCAGGTTCCAAGTTCAAACAGTACTTCAGTTT...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS-3UTR CAA 90 bp AACCTTCAACATATTCTTCCACTGAAAAAGCCAAAGTTCCATTTCAGACATGAAAAGTCACTTCAGAAGTaGACGTCTCCCCAAGATATT +
Preference number: 5 (lower is better)
Translates to: NLQHILPLKKPKFHFRHEKSLQK*TSPQDI
Trigger: AATATCTTGGGGAGACGTCAACTTCTGAAGTGACTT...TTCATGTCTGAAATGGAACTTTGGCTTTTTCAGTGGAAGAATATGTTGAAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GGGACTCCGGGGCCTACACCTGCGGTGCTGGCAGGCTaGCTGCTGGGGGCCACGAGGGCAAAGGCGTCGTCC +
Preference number: 6 (lower is better)
Translates to: GTPGPTPAVLAG*LLGATRAKASS
Trigger: GGACGACGCCTTTGCCCTCGTGGCCCCCAGCAGCCAGCCTGCCAGCACCGCAGGTGTAGGCCCCGGAGTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp CTCCGGGGCCTACACCTGCGGTGCTGGCAGGCTGGCTaGTGGGGGCCACGAGGGCAAAGGCGTCGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: LRGLHLRCWQAG*WGPRGQRRRPG
Trigger: TCCTGGACGACGCCTTTGCCCTCGTGGCCCCCAGCAGCCAGCCTGCCAGCACCGCAGGTGTAGGCCCCGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp CCGAGGAGTGGCCAGGCTGGAGGTCTTCCGTGGAGCTaGTGGGGTAACCCAGCCCAGGGCCCTGCAGTCCCC +
Preference number: 6 (lower is better)
Translates to: PRSGQAGGLPWS*WGNPAQGPAVP
Trigger: GGGGACTGCAGGGCCCTGGGCTGGGTTACCCCACCAGCTCCACGGAAGACCTCCAGCCTGGCCACTCCTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp GGGGCCACGAGGGCAAAGGCGTCGTCCAGGAGGGAGTaGATGGTCTGGCGTGCCTCCTCGATGGACGGCTGG +
Preference number: 6 (lower is better)
Translates to: GATRAKASSRRE*MVWRASSMDGW
Trigger: CCAGCCGTCCATCGAGGAGGCACGCCAGACCATGCACTCCCTCCTGGACGACGCCTTTGCCCTCGTGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp GGTGGGGGAGGTTCCCGGAAGGAGCTGAGGGCTCCCTaGCTGAAGTCCTTGGCACGGCCTCTCTTCGCCCCG +
Preference number: 6 (lower is better)
Translates to: GGGGSRKELRAP*LKSLARPLFAP
Trigger: CGGGGCGAAGAGAGGCCGTGCCAAGGACTTCAGGCAGGGAGCCCTCAGCTCCTTCCGGGAACCTCCCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440172.5
CDS CCA 72 bp TTGCTTTCCGCCACTCGGTCGGCTGGGGAGGGGCGCTaGACGGGAGGTGCCGGGATCGGCTGCATGGCGATA +
Preference number: 6 (lower is better)
Translates to: LLSATRSAGEGR*TGGAGIGCMAI
Trigger: TATCGCCATGCAGCCGATCCCGGCACCTCCCGTCCAGCGCCCCTCCCCAGCCGACCGAGTGGCGGAAAGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp AGGAGTGGCCAGGCTGGAGGTCTTCCGTGGAGCTGGTaGGGTAACCCAGCCCAGGGCCCTGCAGTCCCCGGT +
Preference number: 6 (lower is better)
Translates to: RSGQAGGLPWSW*GNPAQGPAVPG
Trigger: ACCGGGGACTGCAGGGCCCTGGGCTGGGTTACCCCACCAGCTCCACGGAAGACCTCCAGCCTGGCCACTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp GGCAGTGGTGGCCCGCTCTGCGGAGCTCTGTGGGACCTGCCATCGTaGACGGCTCCCGGCGTCTTATCTCCTGCGTCCCTCTCGCTGGAC +
Preference number: 6 (lower is better)
Translates to: GSGGPLCGALWDLPS*TAPGVLSPASLSLD
Trigger: GTCCAGCGAGAGGGACGCAGGAGATAAGACGCCGGGAGCCGTCAACGATGGCAGGTCCCACAGAGCTCCGCAGAGCGGGCCACCACTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp CACTCGGTCGGCTGGGGAGGGGCGCTGGACGGGAGGTaGCGGGATCGGCTGCATGGCGATAAGCTGGATCTT +
Preference number: 6 (lower is better)
Translates to: HSVGWGGALDGR*RDRLHGDKLDL
Trigger: AAGATCCAGCTTATCGCCATGCAGCCGATCCCGGCACCTCCCGTCCAGCGCCCCTCCCCAGCCGACCGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp ACGGGAGGTGCCGGGATCGGCTGCATGGCGATAAGCTaGATCTTACTGGGGACCCGCCGGCTAGCCTCCGGG +
Preference number: 6 (lower is better)
Translates to: TGGAGIGCMAIS*ILLGTRRLASG
Trigger: CCCGGAGGCTAGCCGGCGGGTCCCCAGTAAGATCCAGCTTATCGCCATGCAGCCGATCCCGGCACCTCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp CCAGGAGGGAGTGCATGGTCTGGCGTGCCTCCTCGATaGACGGCTGGGGTGGGATGTACTGGGAGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: PGGSAWSGVPPR*TAGVGCTGRPG
Trigger: TCCCGGCCTCCCAGTACATCCCACCCCAGCCGTCCATCGAGGAGGCACGCCAGACCATGCACTCCCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp GCCCGCTCTGCGGAGCTCTGTGGGACCTGCCATCGTTaGCGGCTCCCGGCGTCTTATCTCCTGCGTCCCTCT +
Preference number: 6 (lower is better)
Translates to: ARSAELCGTCHR*RLPASYLLRPS
Trigger: AGAGGGACGCAGGAGATAAGACGCCGGGAGCCGTCAACGATGGCAGGTCCCACAGAGCTCCGCAGAGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp AGTGCCCGCGGCGCTTGGCGCGCAGGCGGATCTTGTTaGGATGGTGCTCGATCTCAGACTTGTGCCGCAGCG +
Preference number: 6 (lower is better)
Translates to: SARGAWRAGGSC*DGARSQTCAAA
Trigger: CGCTGCGGCACAAGTCTGAGATCGAGCACCATCGCAACAAGATCCGCCTGCGCGCCAAGCGCCGCGGGCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp GGCACGCTGGCCGTGGGGTCCAGGATCTTGTCGATCTaGATCTGTGCCCTGCGGTACACCCGGTGTCGCTCC +
Preference number: 6 (lower is better)
Translates to: GTLAVGSRILSI*ICALRYTRCRS
Trigger: GGAGCGACACCGGGTGTACCGCAGGGCACAGATGCAGATCGACAAGATCCTGGACCCCACGGCCAGCGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GAACTGGGCAGTGGTGGCCCGCTCTGCGGAGCTCTGTaGGACCTGCCATCGTTGACGGCTCCCGGCGTCTTA +
Preference number: 6 (lower is better)
Translates to: ELGSGGPLCGAL*DLPSLTAPGVL
Trigger: TAAGACGCCGGGAGCCGTCAACGATGGCAGGTCCCACAGAGCTCCGCAGAGCGGGCCACCACTGCCCAGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp CGTCTACCACCGGGAACTCGTAGTGCCCGCGGCGCTTaGCGCGCAGGCGGATCTTGTTGCGATGGTGCTCGA +
Preference number: 6 (lower is better)
Translates to: RLPPGTRSARGA*RAGGSCCDGAR
Trigger: TCGAGCACCATCGCAACAAGATCCGCCTGCGCGCCAAGCGCCGCGGGCACTACGAGTTCCCGGTGGTAGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GAGTGCATGGTCTGGCGTGCCTCCTCGATGGACGGCTaGGGTGGGATGTACTGGGAGGCCGGGAAGGGAAGG +
Preference number: 6 (lower is better)
Translates to: ECMVWRASSMDG*GGMYWEAGKGR
Trigger: CCTTCCCTTCCCGGCCTCCCAGTACATCCCACCCCAGCCGTCCATCGAGGAGGCACGCCAGACCATGCACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GGGCCACCGACGGCATCTCCTCCGAGTAGATCCCTCTaGCAGCAAATGGGGCTTCGGCGGAGGCCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: GPPTASPPSRSL*QQMGLRRRPVA
Trigger: AGCCACAGGCCTCCGCCGAAGCCCCATTTGCTGCCAGAGGGATCTACTCGGAGGAGATGCCGTCGGTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp CGTCACCCATCAGGGTGGAGTCGAGGGGACCACCAGTaGCAGCACCGGTGCTGGTTGTGCTCACTTCCGTGG +
Preference number: 6 (lower is better)
Translates to: RHPSGWSRGDHQ*QHRCWLCSLPW
Trigger: CCACGGAAGTGAGCACAACCAGCACCGGTGCTGCCACTGGTGGTCCCCTCGACTCCACCCTGATGGGTGACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp CGGCATCTCCTCCGAGTAGATCCCTCTGGCAGCAAATaGGGCTTCGGCGGAGGCCTGTGGCTGCTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: RHLLRVDPSGSK*GFGGGLWLLRV
Trigger: GACCCTCAGCAGCCACAGGCCTCCGCCGAAGCCCCATTTGCTGCCAGAGGGATCTACTCGGAGGAGATGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp AACACGGAGGGCACGCTGGCCGTGGGGTCCAGGATCTaGTCGATCTGCATCTGTGCCCTGCGGTACACCCGG +
Preference number: 6 (lower is better)
Translates to: NTEGTLAVGSRI*SICICALRYTR
Trigger: CCGGGTGTACCGCAGGGCACAGATGCAGATCGACAAGATCCTGGACCCCACGGCCAGCGTGCCCTCCGTGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp GGCTCTATGAACACGGAGGGCACGCTGGCCGTGGGGTCCAGGATCTaGTCGATCTGCATCTGTGCCCTGCGGTACACCCGGTGTCGCTCC +
Preference number: 6 (lower is better)
Translates to: GSMNTEGTLAVGSRI*SICICALRYTRCRS
Trigger: GGAGCGACACCGGGTGTACCGCAGGGCACAGATGCAGATCGACAAGATCCTGGACCCCACGGCCAGCGTGCCCTCCGTGTTCATAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp CGAGGGGACCACCAGTGGCAGCACCGGTGCTGGTTGTaGTCACTTCCGTGGAGGTGTTCAGTGGCACCTCTG +
Preference number: 6 (lower is better)
Translates to: RGDHQWQHRCWL*SLPWRCSVAPL
Trigger: CAGAGGTGCCACTGAACACCTCCACGGAAGTGAGCACAACCAGCACCGGTGCTGCCACTGGTGGTCCCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp GGGTGGAGTCGAGGGGACCACCAGTGGCAGCACCGGTaGTGGTTGTGCTCACTTCCGTGGAGGTGTTCAGTG +
Preference number: 6 (lower is better)
Translates to: GWSRGDHQWQHR*WLCSLPWRCSV
Trigger: CACTGAACACCTCCACGGAAGTGAGCACAACCAGCACCGGTGCTGCCACTGGTGGTCCCCTCGACTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp AAAGGCGTCGTCCAGGAGGGAGTGCATGGTCTGGCGTaGCTCCTCGATGGACGGCTGGGGTGGGATGTACTG +
Preference number: 6 (lower is better)
Translates to: KGVVQEGVHGLA*LLDGRLGWDVL
Trigger: CAGTACATCCCACCCCAGCCGTCCATCGAGGAGGCACGCCAGACCATGCACTCCCTCCTGGACGACGCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp GAGGCGAGGCCGATCAGCTGTGGAAGTTCTGCACGGTaGTCTGTTTCTGGGAGAGCCGGAGGAGCTCCTCGC +
Preference number: 6 (lower is better)
Translates to: EARPISCGSSAR*SVSGRAGGAPR
Trigger: GCGAGGAGCTCCTCCGGCTCTCCCAGAAACAGAGCACCGTGCAGAACTTCCACAGCTGATCGGCCTCGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GGGCTTGGCACGTCTCCATTTTCCGAGGGCGTGGTGTaGTCCTTCAGAGGTCCTGGCAGTGGCGCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: GLGTSPFSEGVV*SFRGPGSGAGS
Trigger: TGAGCCAGCGCCACTGCCAGGACCTCTGAAGGACCACACCACGCCCTCGGAAAATGGAGACGTGCCAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp TCCTCGCGGATTGCTTTGATGAGAGAGGCCGAGGAGTaGCCAGGCTGGAGGTCTTCCGTGGAGCTGGTGGGG +
Preference number: 6 (lower is better)
Translates to: SSRIALMREAEE*PGWRSSVELVG
Trigger: CCCCACCAGCTCCACGGAAGACCTCCAGCCTGGCCACTCCTCGGCCTCTCTCATCAAAGCAATCCGCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp TCAGGGTGGAGTCGAGGGGACCACCAGTGGCAGCACCGGTGCTGGTaGTGCTCACTTCCGTGGAGGTGTTCAGTGGCACCTCTGTGGGTG +
Preference number: 6 (lower is better)
Translates to: SGWSRGDHQWQHRCW*CSLPWRCSVAPLWV
Trigger: CACCCACAGAGGTGCCACTGAACACCTCCACGGAAGTGAGCACAACCAGCACCGGTGCTGCCACTGGTGGTCCCCTCGACTCCACCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp CTTCCGTGGAGGTGTTCAGTGGCACCTCTGTGGGTGTaGGTGATGGGCCCACGACGGTCAGCTCTGTGGGCA +
Preference number: 6 (lower is better)
Translates to: LPWRCSVAPLWV*VMGPRRSALWA
Trigger: TGCCCACAGAGCTGACCGTCGTGGGCCCATCACTCACACCCACAGAGGTGCCACTGAACACCTCCACGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp GGCCGTGGGGTCCAGGATCTTGTCGATCTGCATCTGTaGCCTGCGGTACACCCGGTGTCGCTCCTTAGTGTC +
Preference number: 6 (lower is better)
Translates to: GRGVQDLVDLHL*PAVHPVSLLSV
Trigger: GACACTAAGGAGCGACACCGGGTGTACCGCAGGGCACAGATGCAGATCGACAAGATCCTGGACCCCACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp GCTCCAATTCTGCTGGCAATCCCCACCTGTGTCAGGTaGTGGATCTGGGAGCCTGTGGTACCCCCGACAGGC +
Preference number: 6 (lower is better)
Translates to: APILLAIPTCVR*WIWEPVVPPTG
Trigger: GCCTGTCGGGGGTACCACAGGCTCCCAGATCCAGCACCTGACACAGGTGGGGATTGCCAGCAGAATTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp GGTGGGGGAGGTTCCCGGAAGGAGCTGAGGGCTCCCTaGCTGAAGTCCTTGGCACCTGAAATAGCGGTGAAG +
Preference number: 6 (lower is better)
Translates to: GGGGSRKELRAP*LKSLAPEIAVK
Trigger: CTTCACCGCTATTTCAGGTGCCAAGGACTTCAGGCAGGGAGCCCTCAGCTCCTTCCGGGAACCTCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422774.2
CDS GCA 72 bp CTGTTTCTGGGAGAGCCGGAGGAGCTCCTCGCGGATTaGTTTGATGAGAGAGGCCGAGGAGTGGCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: LFLGEPEELLAD*FDERGRGVARL
Trigger: CAGCCTGGCCACTCCTCGGCCTCTCTCATCAAAGCAATCCGCGAGGAGCTCCTCCGGCTCTCCCAGAAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp TGGAGTCGAGGGGACCACCAGTGGCAGCACCGGTGCTaGTTGTGCTCACTTCCGTGGAGGTGTTCAGTGGCA +
Preference number: 6 (lower is better)
Translates to: WSRGDHQWQHRC*LCSLPWRCSVA
Trigger: TGCCACTGAACACCTCCACGGAAGTGAGCACAACCAGCACCGGTGCTGCCACTGGTGGTCCCCTCGACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp AGATGGAGGCTGATGAGTGCTGCTCATTTCCCGAACTaGGCAGTGGTGGCCCGCTCTGCGGAGCTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: RWRLMSAAHFPN*AVVARSAELCG
Trigger: CCCACAGAGCTCCGCAGAGCGGGCCACCACTGCCCAGTTCGGGAAATGAGCAGCACTCATCAGCCTCCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp TTTGTTGATTTTATTGCTTTCCGCCACTCGGTCGGCTaGGGAGGGGCGCTGGACGGGAGGTGCCGGGATCGG +
Preference number: 6 (lower is better)
Translates to: FVDFIAFRHSVG*GGALDGRCRDR
Trigger: CCGATCCCGGCACCTCCCGTCCAGCGCCCCTCCCCAGCCGACCGAGTGGCGGAAAGCAATAAAATCAACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp CCCCAGTTCCACCGAGGATGGTGTCTGCACATCGGCTaGGAGGTCAGGATCCGATGGGCATCCGATGTAGGC +
Preference number: 6 (lower is better)
Translates to: PQFHRGWCLHIG*EVRIRWASDVG
Trigger: GCCTACATCGGATGCCCATCGGATCCTGACCTCCCAGCCGATGTGCAGACACCATCCTCGGTGGAACTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GGGAAGGGCTGGATACCTCCCCAGTTCCACCGAGGATaGTGTCTGCACATCGGCTGGGAGGTCAGGATCCGA +
Preference number: 6 (lower is better)
Translates to: GKGWIPPQFHRG*CLHIGWEVRIR
Trigger: TCGGATCCTGACCTCCCAGCCGATGTGCAGACACCATCCTCGGTGGAACTGGGGAGGTATCCAGCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp AGTCGAGGGGACCACCAGTGGCAGCACCGGTGCTGGTaGTGCTCACTTCCGTGGAGGTGTTCAGTGGCACCT +
Preference number: 6 (lower is better)
Translates to: SRGDHQWQHRCW*CSLPWRCSVAP
Trigger: AGGTGCCACTGAACACCTCCACGGAAGTGAGCACAACCAGCACCGGTGCTGCCACTGGTGGTCCCCTCGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp ATGAGCCGGTCCTTCTCAGCGTCGGCAGGACAGCCGTaGACCTGGTGTTTCCGGCGAGGCTTGGGAGAACGT +
Preference number: 6 (lower is better)
Translates to: MSRSFSASAGQP*TWCFRRGLGER
Trigger: ACGTTCTCCCAAGCCTCGCCGGAAACACCAGGTCAACGGCTGTCCTGCCGACGCTGAGAAGGACCGGCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp CAGCACGGTCATGCACAGAGTCTCGGCACCATCCCCTaGTCCCACGTCTTTCTCCATGAGGCTCGTGGCCAG +
Preference number: 6 (lower is better)
Translates to: QHGHAQSLGTIP*SHVFLHEARGQ
Trigger: CTGGCCACGAGCCTCATGGAGAAAGACGTGGGATCAGGGGATGGTGCCGAGACTCTGTGCATGACCGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp CCTGCCATCGTTGACGGCTCCCGGCGTCTTATCTCCTaGGTCCCTCTCGCTGGACTCTTCACTGACCGTAGA +
Preference number: 6 (lower is better)
Translates to: PAIVDGSRRLIS*VPLAGLFTDRR
Trigger: TCTACGGTCAGTGAAGAGTCCAGCGAGAGGGACGCAGGAGATAAGACGCCGGGAGCCGTCAACGATGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp CTGTCCACGTGCTCGAAGATGGAGGCTGATGAGTGCTaGTCATTTCCCGAACTGGGCAGTGGTGGCCCGCTC +
Preference number: 6 (lower is better)
Translates to: LSTCSKMEADEC*SFPELGSGGPL
Trigger: GAGCGGGCCACCACTGCCCAGTTCGGGAAATGAGCAGCACTCATCAGCCTCCATCTTCGAGCACGTGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp GCTGGATACCTCCCCAGTTCCACCGAGGATGGTGTCTaGACATCGGCTGGGAGGTCAGGATCCGATGGGCAT +
Preference number: 6 (lower is better)
Translates to: AGYLPSSTEDGV*TSAGRSGSDGH
Trigger: ATGCCCATCGGATCCTGACCTCCCAGCCGATGTGCAGACACCATCCTCGGTGGAACTGGGGAGGTATCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp AATCTGCGAGGCGAGGCCGATCAGCTGTGGAAGTTCTaGACGGTGCTCTGTTTCTGGGAGAGCCGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: NLRGEADQLWKF*TVLCFWESRRS
Trigger: GCTCCTCCGGCTCTCCCAGAAACAGAGCACCGTGCAGAACTTCCACAGCTGATCGGCCTCGCCTCGCAGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GACGGCGGGGCTGTGACATGGAGAGGACTGCTGTGCTaGGAGCCGGGAGCAGTTTCTGTTAAGGCCACTTGT +
Preference number: 6 (lower is better)
Translates to: DGGAVTWRGLLC*EPGAVSVKATC
Trigger: ACAAGTGGCCTTAACAGAAACTGCTCCCGGCTCCCAGCACAGCAGTCCTCTCCATGTCACAGCCCCGCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GTAGGATCAAGTGACGCCGGCACAGAGAGGCGGCCGTaGGCAGGGGGAACCTGTGTGGTTGTAACACTACTC +
Preference number: 6 (lower is better)
Translates to: VGSSDAGTERRP*AGGTCVVVTLL
Trigger: GAGTAGTGTTACAACCACACAGGTTCCCCCTGCCCACGGCCGCCTCTCTGTGCCGGCGTCACTTGATCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp TTCGTATCTACTGCAGGGATTGTTGGCCGTCTGGGCTaGGCTGTAGAAGGACCCCCACTGGGTGGCTCGCCT +
Preference number: 6 (lower is better)
Translates to: FVSTAGIVGRLG*AVEGPPLGGSP
Trigger: AGGCGAGCCACCCAGTGGGGGTCCTTCTACAGCCCAGCCCAGACGGCCAACAATCCCTGCAGTAGATACGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp GAGAACGTTTTATCCGTGAGCTCTTCCTGGGCTCTATaGACACGGAGGGCACGCTGGCCGTGGGGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: ENVLSVSSSWAL*TRRARWPWGPG
Trigger: TCCTGGACCCCACGGCCAGCGTGCCCTCCGTGTTCATAGAGCCCAGGAAGAGCTCACGGATAAAACGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp CGGCTTGGCAGTAGCCAGTGTTGGTGTGTCGACTGTTaGTTCGAGAGTGAAGGCAGTCACGGGACGCAGGGA +
Preference number: 6 (lower is better)
Translates to: RLGSSQCWCVDC*FESEGSHGTQG
Trigger: TCCCTGCGTCCCGTGACTGCCTTCACTCTCGAAGCAACAGTCGACACACCAACACTGGCTACTGCCAAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp ATCCTGTCCACGTGCTCGAAGATGGAGGCTGATGAGTaGTGCTCATTTCCCGAACTGGGCAGTGGTGGCCCG +
Preference number: 6 (lower is better)
Translates to: ILSTCSKMEADE*CSFPELGSGGP
Trigger: CGGGCCACCACTGCCCAGTTCGGGAAATGAGCAGCACTCATCAGCCTCCATCTTCGAGCACGTGGACAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp CGGTCCTTCTCAGCGTCGGCAGGACAGCCGTTGACCTaGTGTTTCCGGCGAGGCTTGGGAGAACGTTTTATC +
Preference number: 6 (lower is better)
Translates to: RSFSASAGQPLT*CFRRGLGERFI
Trigger: GATAAAACGTTCTCCCAAGCCTCGCCGGAAACACCAGGTCAACGGCTGTCCTGCCGACGCTGAGAAGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp GCAGGACAGCCGTTGACCTGGTGTTTCCGGCGAGGCTaGGGAGAACGTTTTATCCGTGAGCTCTTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: AGQPLTWCFRRG*GERFIRELFLG
Trigger: GCCCAGGAAGAGCTCACGGATAAAACGTTCTCCCAAGCCTCGCCGGAAACACCAGGTCAACGGCTGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp ACCACCAGCACTGGGATGACCACGCCAACAATGACCCACAAGTTGTaGCTCTGGGATTCCGGAGACGGCCTCTTCACCCTGTCGACAGGC +
Preference number: 6 (lower is better)
Translates to: TTSTGMTTPTMTHKL*LWDSGDGLFTLSTG
Trigger: GCCTGTCGACAGGGTGAAGAGGCCGTCTCCGGAATCCCAGAGCAACAACTTGTGGGTCATTGTTGGCGTGGTCATCCCAGTGCTGGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp TCTGTGGTGATGAGCCGGTCCTTCTCAGCGTCGGCAGGACAGCCGTaGACCTGGTGTTTCCGGCGAGGCTTGGGAGAACGTTTTATCCGT +
Preference number: 6 (lower is better)
Translates to: SVVMSRSFSASAGQP*TWCFRRGLGERFIR
Trigger: ACGGATAAAACGTTCTCCCAAGCCTCGCCGGAAACACCAGGTCAACGGCTGTCCTGCCGACGCTGAGAAGGACCGGCTCATCACCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp TCAGCGTCGGCAGGACAGCCGTTGACCTGGTGTTTCCGGCGAGGCTaGGGAGAACGTTTTATCCGTGAGCTCTTCCTGGGCTCTATGAAC +
Preference number: 6 (lower is better)
Translates to: SASAGQPLTWCFRRG*GERFIRELFLGSMN
Trigger: GTTCATAGAGCCCAGGAAGAGCTCACGGATAAAACGTTCTCCCAAGCCTCGCCGGAAACACCAGGTCAACGGCTGTCCTGCCGACGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp TCTCGGCACCATCCCCTGATCCCACGTCTTTCTCCATaGGGCTCGTGGCCAGAACTTGCTGAGGTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: SRHHPLIPRLSP*GSWPELAEVKA
Trigger: TGCCTTCACCTCAGCAAGTTCTGGCCACGAGCCTCATGGAGAAAGACGTGGGATCAGGGGATGGTGCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp ACGCAGGTGCTTCCGAAGGCGAAGAGATGGAGCCGCTaGGTTCCAGCGGGGGTGTTGAGAAAAAGCTGGATG +
Preference number: 6 (lower is better)
Translates to: TQVLPKAKRWSR*VPAGVLRKSWM
Trigger: CATCCAGCTTTTTCTCAACACCCCCGCTGGAACTCAGCGGCTCCATCTCTTCGCCTTCGGAAGCACCTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp TACTGGCTGCCTCTGCTTGGCGGGATTTCCACTGGCTaGGCTCCAATTCTGCTGGCAATCCCCACCTGTGTC +
Preference number: 6 (lower is better)
Translates to: YWLPLLGGISTG*APILLAIPTCV
Trigger: GACACAGGTGGGGATTGCCAGCAGAATTGGAGCTCAGCCAGTGGAAATCCCGCCAAGCAGAGGCAGCCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp CCGAAAGGTGTGGAAATGACTGGCGGACTCAGCATATaGCGCTGGTTGTCGCGTTGTGTTCTGCCAGCCCGA +
Preference number: 6 (lower is better)
Translates to: PKGVEMTGGLSI*RWLSRCVLPAR
Trigger: TCGGGCTGGCAGAACACAACGCGACAACCAGCGGCATATGCTGAGTCCGCCAGTCATTTCCACACCTTTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp GGACAAGTCACTCGGCATCAGAGACAGAGACGCAGGTaGTTCCGAAGGCGAAGAGATGGAGCCGCTGAGTTC +
Preference number: 6 (lower is better)
Translates to: GQVTRHQRQRRR*FRRRRDGAAEF
Trigger: GAACTCAGCGGCTCCATCTCTTCGCCTTCGGAAGCACCTGCGTCTCTGTCTCTGATGCCGAGTGACTTGTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GGTGTGGAAATGACTGGCGGACTCAGCATATGCCGCTaGTTGTCGCGTTGTGTTCTGCCAGCCCGATGTCAC +
Preference number: 6 (lower is better)
Translates to: GVEMTGGLSICR*LSRCVLPARCH
Trigger: GTGACATCGGGCTGGCAGAACACAACGCGACAACCAGCGGCATATGCTGAGTCCGCCAGTCATTTCCACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp TTGGCGGGATTTCCACTGGCTGAGCTCCAATTCTGCTaGCAATCCCCACCTGTGTCAGGTGCTGGATCTGGG +
Preference number: 6 (lower is better)
Translates to: LAGFPLAELQFC*QSPPVSGAGSG
Trigger: CCCAGATCCAGCACCTGACACAGGTGGGGATTGCCAGCAGAATTGGAGCTCAGCCAGTGGAAATCCCGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GATCAGCTGTGGAAGTTCTGCACGGTGCTCTGTTTCTaGGAGAGCCGGAGGAGCTCCTCGCGGATTGCTTTG +
Preference number: 6 (lower is better)
Translates to: DQLWKFCTVLCF*ESRRSSSRIAL
Trigger: CAAAGCAATCCGCGAGGAGCTCCTCCGGCTCTCCCAGAAACAGAGCACCGTGCAGAACTTCCACAGCTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp GGAAACCTCGCTGAGCAGCTGGGCCAGCTTGCGTTCCATCTCGGCTaGAAACACTTCATTCTGGAGTTGCTTCTCCATGACGCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: GNLAEQLGQLAFHLG*KHFILELLLHDAQE
Trigger: CTCCTGGGCGTCATGGAGAAGCAACTCCAGAATGAAGTGTTTCAAGCCGAGATGGAACGCAAGCTGGCCCAGCTGCTCAGCGAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp ATCACCACCAGCACTGGGATGACCACGCCAACAATGACCCACAAGTaGTTGCTCTGGGATTCCGGAGACGGCCTCTTCACCCTGTCGACA +
Preference number: 6 (lower is better)
Translates to: ITTSTGMTTPTMTHK*LLWDSGDGLFTLST
Trigger: TGTCGACAGGGTGAAGAGGCCGTCTCCGGAATCCCAGAGCAACAACTTGTGGGTCATTGTTGGCGTGGTCATCCCAGTGCTGGTGGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp GGGGGAGGTTCCCGGAAGGAGCTGAGGGCTCCCTGCCTGAAGTCCTaGGCACCTGAAATAGCGGTGAAGAAGAATACTCTTGATGTCCGA +
Preference number: 6 (lower is better)
Translates to: GGGSRKELRAPCLKS*APEIAVKKNTLDVR
Trigger: TCGGACATCAAGAGTATTCTTCTTCACCGCTATTTCAGGTGCCAAGGACTTCAGGCAGGGAGCCCTCAGCTCCTTCCGGGAACCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422774.2
CDS TCA 72 bp GTCTGCACTTGTGGCCCAAACCTCCTCTGGAGGCTGTaGGACCTCCCCCAAGGAGGGCAACGGTATAGTAAT +
Preference number: 6 (lower is better)
Translates to: VCTCGPNLLWRL*DLPQGGQRYSN
Trigger: ATTACTATACCGTTGCCCTCCTTGGGGGAGGTCTCACAGCCTCCAGAGGAGGTTTGGGCCACAAGTGCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp TTTCTCCATGAGGCTCGTGGCCAGAACTTGCTGAGGTaGAGGCACAGTGCAGGCCGCACACCAAGTGTATGG +
Preference number: 6 (lower is better)
Translates to: FLHEARGQNLLR*RHSAGRTPSVW
Trigger: CCATACACTTGGTGTGCGGCCTGCACTGTGCCTTCACCTCAGCAAGTTCTGGCCACGAGCCTCATGGAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp TGCTTGGCGGGATTTCCACTGGCTGAGCTCCAATTCTaGTGGCAATCCCCACCTGTGTCAGGTGCTGGATCT +
Preference number: 6 (lower is better)
Translates to: CLAGFPLAELQF*WQSPPVSGAGS
Trigger: AGATCCAGCACCTGACACAGGTGGGGATTGCCAGCAGAATTGGAGCTCAGCCAGTGGAAATCCCGCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp TACTTGGCAAATCTGCGAGGCGAGGCCGATCAGCTGTaGAAGTTCTGCACGGTGCTCTGTTTCTGGGAGAGC +
Preference number: 6 (lower is better)
Translates to: YLANLRGEADQL*KFCTVLCFWES
Trigger: GCTCTCCCAGAAACAGAGCACCGTGCAGAACTTCCACAGCTGATCGGCCTCGCCTCGCAGATTTGCCAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp GTGGAAATGACTGGCGGACTCAGCATATGCCGCTGGTaGTCGCGTTGTGTTCTGCCAGCCCGATGTCACTTC +
Preference number: 6 (lower is better)
Translates to: VEMTGGLSICRW*SRCVLPARCHF
Trigger: GAAGTGACATCGGGCTGGCAGAACACAACGCGACAACCAGCGGCATATGCTGAGTCCGCCAGTCATTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp ACTGGGATGACCACGCCAACAATGACCCACAAGTTGTaGCTCTGGGATTCCGGAGACGGCCTCTTCACCCTG +
Preference number: 6 (lower is better)
Translates to: TGMTTPTMTHKL*LWDSGDGLFTL
Trigger: CAGGGTGAAGAGGCCGTCTCCGGAATCCCAGAGCAACAACTTGTGGGTCATTGTTGGCGTGGTCATCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp AGCACTGGGATGACCACGCCAACAATGACCCACAAGTaGTTGCTCTGGGATTCCGGAGACGGCCTCTTCACC +
Preference number: 6 (lower is better)
Translates to: STGMTTPTMTHK*LLWDSGDGLFT
Trigger: GGTGAAGAGGCCGTCTCCGGAATCCCAGAGCAACAACTTGTGGGTCATTGTTGGCGTGGTCATCCCAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp GGCTTTGACTCAACACAGTGGTCACATCAGTGTATCTGTCTGCACTaGTGGCCCAAACCTCCTCTGGAGGCTGTGAGACCTCCCCCAAGG +
Preference number: 6 (lower is better)
Translates to: GFDSTQWSHQCICLH*WPKPPLEAVRPPPR
Trigger: CCTTGGGGGAGGTCTCACAGCCTCCAGAGGAGGTTTGGGCCACAAGTGCAGACAGATACACTGATGTGACCACTGTGTTGAGTCAAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp TCAGAGGTGCGAAAAGCTGACCGAAAGGTGTGGAAATaGCTGGCGGACTCAGCATATGCCGCTGGTTGTCGC +
Preference number: 6 (lower is better)
Translates to: SEVRKADRKVWK*LADSAYAAGCR
Trigger: GCGACAACCAGCGGCATATGCTGAGTCCGCCAGTCATTTCCACACCTTTCGGTCAGCTTTTCGCACCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp AGGAGTTGGAACGATGCCCTCAGAGGTGCGAAAAGCTaGCCGAAAGGTGTGGAAATGACTGGCGGACTCAGC +
Preference number: 6 (lower is better)
Translates to: RSWNDALRGAKS*PKGVEMTGGLS
Trigger: GCTGAGTCCGCCAGTCATTTCCACACCTTTCGGTCAGCTTTTCGCACCTCTGAGGGCATCGTTCCAACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp GTGTATGGTCTGAATGAGGACACCGGGCTCAGGATATaGGTGTTGTCCACAGGACCGGGGAGGGCTGAATTG +
Preference number: 6 (lower is better)
Translates to: VYGLNEDTGLRI*VLSTGPGRAEL
Trigger: CAATTCAGCCCTCCCCGGTCCTGTGGACAACACTCATATCCTGAGCCCGGTGTCCTCATTCAGACCATACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp CACAGTGCAGGCCGCACACCAAGTGTATGGTCTGAATaGGGACACCGGGCTCAGGATATGAGTGTTGTCCAC +
Preference number: 6 (lower is better)
Translates to: HSAGRTPSVWSE*GHRAQDMSVVH
Trigger: GTGGACAACACTCATATCCTGAGCCCGGTGTCCTCATTCAGACCATACACTTGGTGTGCGGCCTGCACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp GTCTTGCTTCCACAGGAAGCGGATACTTGGCAAATCTaGGAGGCGAGGCCGATCAGCTGTGGAAGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: VLLPQEADTWQI*EARPISCGSSA
Trigger: TGCAGAACTTCCACAGCTGATCGGCCTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTGTGGAAGCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp AGGTGCGAAAAGCTGACCGAAAGGTGTGGAAATGACTaGCGGACTCAGCATATGCCGCTGGTTGTCGCGTTG +
Preference number: 6 (lower is better)
Translates to: RCEKLTERCGND*RTQHMPLVVAL
Trigger: CAACGCGACAACCAGCGGCATATGCTGAGTCCGCCAGTCATTTCCACACCTTTCGGTCAGCTTTTCGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp ATGACCACGCCAACAATGACCCACAAGTTGTTGCTCTaGGATTCCGGAGACGGCCTCTTCACCCTGTCGACA +
Preference number: 6 (lower is better)
Translates to: MTTPTMTHKLLL*DSGDGLFTLST
Trigger: TGTCGACAGGGTGAAGAGGCCGTCTCCGGAATCCCAGAGCAACAACTTGTGGGTCATTGTTGGCGTGGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp GACTGGCGGACTCAGCATATGCCGCTGGTTGTCGCGTaGTGTTCTGCCAGCCCGATGTCACTTCTTCATCTT +
Preference number: 6 (lower is better)
Translates to: DWRTQHMPLVVA*CSASPMSLLHL
Trigger: AAGATGAAGAAGTGACATCGGGCTGGCAGAACACAACGCGACAACCAGCGGCATATGCTGAGTCCGCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp CCGAAAGGTGTGGAAATGACTGGCGGACTCAGCATATGCCGCTGGTaGTCGCGTTGTGTTCTGCCAGCCCGATGTCACTTCTTCATCTTG +
Preference number: 6 (lower is better)
Translates to: PKGVEMTGGLSICRW*SRCVLPARCHFFIL
Trigger: CAAGATGAAGAAGTGACATCGGGCTGGCAGAACACAACGCGACAACCAGCGGCATATGCTGAGTCCGCCAGTCATTTCCACACCTTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp AAGGCACAGTGCAGGCCGCACACCAAGTGTATGGTCTaGATGAGGACACCGGGCTCAGGATATGAGTGTTGT +
Preference number: 6 (lower is better)
Translates to: KAQCRPHTKCMV*MRTPGSGYECC
Trigger: ACAACACTCATATCCTGAGCCCGGTGTCCTCATTCAGACCATACACTTGGTGTGCGGCCTGCACTGTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp GATGATATTCACCGGGCCCCGCCGAGGAGTCACCCTTaGGGAACTGATGGTGATATTCAAGATCTGCACCGT +
Preference number: 6 (lower is better)
Translates to: DDIHRAPPRSHP*GTDGDIQDLHR
Trigger: ACGGTGCAGATCTTGAATATCACCATCAGTTCCTCAAGGGTGACTCCTCGGCGGGGCCCGGTGAATATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp CTGAGCAGCTGGGCCAGCTTGCGTTCCATCTCGGCTTaGAACACTTCATTCTGGAGTTGCTTCTCCATGACG +
Preference number: 6 (lower is better)
Translates to: LSSWASLRSISA*NTSFWSCFSMT
Trigger: CGTCATGGAGAAGCAACTCCAGAATGAAGTGTTTCAAGCCGAGATGGAACGCAAGCTGGCCCAGCTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp TTCAGCACGAGCTCCATGGAGTATAAAGAAAGGTTGTaGTGTTCCGGAGAGAGCTCATCTGGGGCGCACGAG +
Preference number: 6 (lower is better)
Translates to: FSTSSMEYKERL*CSGESSSGAHE
Trigger: CTCGTGCGCCCCAGATGAGCTCTCTCCGGAACAGCACAACCTTTCTTTATACTCCATGGAGCTCGTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp GTGTTGTCCACAGGACCGGGGAGGGCTGAATTGCTATaGAATTCGGATGTTTTGCTGGAGTCGCTAGGGAGA +
Preference number: 6 (lower is better)
Translates to: VLSTGPGRAELL*NSDVLLESLGR
Trigger: TCTCCCTAGCGACTCCAGCAAAACATCCGAATTGCATAGCAATTCAGCCCTCCCCGGTCCTGTGGACAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp TCATTAGAGAGATGCTGCTTTCTTCCAGCACGGTCATaGACAGAGTCTCGGCACCATCCCCTGATCCCACGT +
Preference number: 6 (lower is better)
Translates to: SLERCCFLPARS*TESRHHPLIPR
Trigger: ACGTGGGATCAGGGGATGGTGCCGAGACTCTGTGCATGACCGTGCTGGAAGAAAGCAGCATCTCTCTAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GGGCAGCCCTGGTGGGCTGACTGTGATATACTGTATTaGAGAAACCATCCGTGGAGTGGTCCAGTGAGTATC +
Preference number: 6 (lower is better)
Translates to: GQPWWADCDILY*RNHPWSGPVSI
Trigger: GATACTCACTGGACCACTCCACGGATGGTTTCTCCAATACAGTATATCACAGTCAGCCCACCAGGGCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GGTGATGACCGAGAAAAATGCAGTGGTCACGCTGGATaGCGTCACTTGGGTTTCAGCAACAGACAAGGAGCC +
Preference number: 6 (lower is better)
Translates to: GDDREKCSGHAG*RHLGFSNRQGA
Trigger: GGCTCCTTGTCTGTTGCTGAAACCCAAGTGACGCCATCCAGCGTGACCACTGCATTTTTCTCGGTCATCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp CGAGGGCGTGGTGTGGTCCTTCAGAGGTCCTGGCAGTaGCGCTGGCTCATGAATAATCAATATGTCGTCTTT +
Preference number: 6 (lower is better)
Translates to: RGRGVVLQRSWQ*RWLMNNQYVVF
Trigger: AAAGACGACATATTGATTATTCATGAGCCAGCGCCACTGCCAGGACCTCTGAAGGACCACACCACGCCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp CTCTGTGACGAACATTCTTGGAAGGGATCTTTGACTTaGGGCTTGGCACGTCTCCATTTTCCGAGGGCGTGG +
Preference number: 6 (lower is better)
Translates to: LCDEHSWKGSLT*GLARLHFPRAW
Trigger: CCACGCCCTCGGAAAATGGAGACGTGCCAAGCCCCAAGTCAAAGATCCCTTCCAAGAATGTTCGTCACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp TTCCTTTTGGTCTTGCTTCCACAGGAAGCGGATACTTaGCAAATCTGCGAGGCGAGGCCGATCAGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: FLLVLLPQEADT*QICEARPISCG
Trigger: TCCACAGCTGATCGGCCTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp CGAGAAAAATGCAGTGGTCACGCTGGATGGCGTCACTaGGGTTTCAGCAACAGACAAGGAGCCAGCAGTAGG +
Preference number: 6 (lower is better)
Translates to: REKCSGHAGWRH*GFSNRQGASSR
Trigger: CCTACTGCTGGCTCCTTGTCTGTTGCTGAAACCCAAGTGACGCCATCCAGCGTGACCACTGCATTTTTCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp GCTGAGCAGCTGGGCCAGCTTGCGTTCCATCTCGGCTaGAAACACTTCATTCTGGAGTTGCTTCTCCATGAC +
Preference number: 6 (lower is better)
Translates to: AEQLGQLAFHLG*KHFILELLLHD
Trigger: GTCATGGAGAAGCAACTCCAGAATGAAGTGTTTCAAGCCGAGATGGAACGCAAGCTGGCCCAGCTGCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp CCTCTTCACCCTGTCGACAGGCTGGGCAATGACACCTaGAATTCGGTAACCCAAGATGATGGCTGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: PLHPVDRLGNDT*NSVTQDDGCSL
Trigger: CAGAGAGCAGCCATCATCTTGGGTTACCGAATTCAAGGTGTCATTGCCCAGCCTGTCGACAGGGTGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp GACGAACATTCTTGGAAGGGATCTTTGACTTGGGGCTaGGCACGTCTCCATTTTCCGAGGGCGTGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: DEHSWKGSLTWG*ARLHFPRAWCG
Trigger: ACCACACCACGCCCTCGGAAAATGGAGACGTGCCAAGCCCCAAGTCAAAGATCCCTTCCAAGAATGTTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp TTTCCTTTTGGTCTTGCTTCCACAGGAAGCGGATACTaGGCAAATCTGCGAGGCGAGGCCGATCAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: FPFGLASTGSGY*ANLRGEADQLW
Trigger: CCACAGCTGATCGGCCTCGCCTCGCAGATTTGCCAAGTATCCGCTTCCTGTGGAAGCAAGACCAAAAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp GGCCAGCTTGCGTTCCATCTCGGCTTGAAACACTTCATTCTGGAGTaGCTTCTCCATGACGCCCAGGAGAACTGTTCTGACCCAAGAGGA +
Preference number: 6 (lower is better)
Translates to: GQLAFHLGLKHFILE*LLHDAQENCSDPRG
Trigger: TCCTCTTGGGTCAGAACAGTTCTCCTGGGCGTCATGGAGAAGCAACTCCAGAATGAAGTGTTTCAAGCCGAGATGGAACGCAAGCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp TTCCTCTGTGACGAACATTCTTGGAAGGGATCTTTGACTTGGGGCTaGGCACGTCTCCATTTTCCGAGGGCGTGGTGTGGTCCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: FLCDEHSWKGSLTWG*ARLHFPRAWCGPSE
Trigger: CTCTGAAGGACCACACCACGCCCTCGGAAAATGGAGACGTGCCAAGCCCCAAGTCAAAGATCCCTTCCAAGAATGTTCGTCACAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp AAGAGGCCAGGACAGACACGTGACCGTCTAGAGCACTaGTTTGGTCGTCAGGAGGTGTCAGAGTTGAGAACA +
Preference number: 6 (lower is better)
Translates to: KRPGQTRDRLEH*FGRQEVSELRT
Trigger: TGTTCTCAACTCTGACACCTCCTGACGACCAAATCAGTGCTCTAGACGGTCACGTGTCTGTCCTGGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp AGAGAGCTGTCATTAGGCCTTTCTCAATGCGCTGGGTaGAGTTGCAGAAGCCAGTATCCACACTCGGAGGCA +
Preference number: 6 (lower is better)
Translates to: RELSLGLSQCAG*SCRSQYPHSEA
Trigger: TGCCTCCGAGTGTGGATACTGGCTTCTGCAACTTCACCCAGCGCATTGAGAAAGGCCTAATGACAGCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp AATTCCTGCCAGGAGTTGGAACGATGCCCTCAGAGGTaGGAAAAGCTGACCGAAAGGTGTGGAAATGACTGG +
Preference number: 6 (lower is better)
Translates to: NSCQELERCPQR*EKLTERCGNDW
Trigger: CCAGTCATTTCCACACCTTTCGGTCAGCTTTTCGCACCTCTGAGGGCATCGTTCCAACTCCTGGCAGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp AGAATGTGTCCTGCTGAATGCAAGGGCTGCGTGCGATaGAGTCACAGTGGGGTATGTTCTTGGAGAGATGGT +
Preference number: 6 (lower is better)
Translates to: RMCPAECKGCVR*SHSGVCSWRDG
Trigger: ACCATCTCTCCAAGAACATACCCCACTGTGACTGCATCGCACGCAGCCCTTGCATTCAGCAGGACACATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp CTGTGGATACTGGAAGGGCTCTGCGATCTGCAGCACTaGGTATCCCAGATAGAAACTGAACTCCACCACACT +
Preference number: 6 (lower is better)
Translates to: LWILEGLCDLQH*VSQIETELHHT
Trigger: AGTGTGGTGGAGTTCAGTTTCTATCTGGGATACCCAGTGCTGCAGATCGCAGAGCCCTTCCAGTATCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp TTCTTCAGCACGAGCTCCATGGAGTATAAAGAAAGGTaGTGCTGTTCCGGAGAGAGCTCATCTGGGGCGCAC +
Preference number: 6 (lower is better)
Translates to: FFSTSSMEYKER*CCSGESSSGAH
Trigger: GTGCGCCCCAGATGAGCTCTCTCCGGAACAGCACAACCTTTCTTTATACTCCATGGAGCTCGTGCTGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp GCATCGGGGACTGTGATATCACAAACATATGGCGGCTaGGCAGTAGCCAGTGTTGGTGTGTCGACTGTTGCT +
Preference number: 6 (lower is better)
Translates to: ASGTVISQTYGG*AVASVGVSTVA
Trigger: AGCAACAGTCGACACACCAACACTGGCTACTGCCAAGCCGCCATATGTTTGTGATATCACAGTCCCCGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp GCTGTCATTAGGCCTTTCTCAATGCGCTGGGTGAAGTaGCAGAAGCCAGTATCCACACTCGGAGGCACAAAC +
Preference number: 6 (lower is better)
Translates to: AVIRPFSMRWVK*QKPVSTLGGTN
Trigger: GTTTGTGCCTCCGAGTGTGGATACTGGCTTCTGCAACTTCACCCAGCGCATTGAGAAAGGCCTAATGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp AGGGAGAAACTCTTCCTCTGTGACGAACATTCTTGGAAGGGATCTTaGACTTGGGGCTTGGCACGTCTCCATTTTCCGAGGGCGTGGTGT +
Preference number: 6 (lower is better)
Translates to: REKLFLCDEHSWKGS*TWGLARLHFPRAWC
Trigger: ACACCACGCCCTCGGAAAATGGAGACGTGCCAAGCCCCAAGTCAAAGATCCCTTCCAAGAATGTTCGTCACAGAGGAAGAGTTTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp CTCATCGTCATTGACGGCCACCTCTTTACTCGTCACTaGCACGTAAGTTGCCACAAAGATGCTGGGATCTGC +
Preference number: 6 (lower is better)
Translates to: LIVIDGHLFTRH*HVSCHKDAGIC
Trigger: GCAGATCCCAGCATCTTTGTGGCAACTTACGTGTCAGTGACGAGTAAAGAGGTGGCCGTCAATGACGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp CAGGATATGAGTGTTGTCCACAGGACCGGGGAGGGCTaGATTGCTATGCAATTCGGATGTTTTGCTGGAGTC +
Preference number: 6 (lower is better)
Translates to: QDMSVVHRTGEG*IAMQFGCFAGV
Trigger: GACTCCAGCAAAACATCCGAATTGCATAGCAATTCAGCCCTCCCCGGTCCTGTGGACAACACTCATATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp AGAAGTCTGCTACGACGCTACTCATTAGAGAGATGCTaGTTTCTTCCAGCACGGTCATGCACAGAGTCTCGG +
Preference number: 6 (lower is better)
Translates to: RSLLRRYSLERC*FLPARSCTESR
Trigger: CCGAGACTCTGTGCATGACCGTGCTGGAAGAAAGCAGCATCTCTCTAATGAGTAGCGTCGTAGCAGACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp CGCTGTGCCCAGTGCTTTTCTTCAGCACGAGCTCCATaGAGTATAAAGAAAGGTTGTGCTGTTCCGGAGAGA +
Preference number: 6 (lower is better)
Translates to: RCAQCFSSARAP*SIKKGCAVPER
Trigger: TCTCTCCGGAACAGCACAACCTTTCTTTATACTCCATGGAGCTCGTGCTGAAGAAAAGCACTGGGCACAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp ATCACAAACATATGGCGGCTTGGCAGTAGCCAGTGTTaGTGTGTCGACTGTTGCTTCGAGAGTGAAGGCAGT +
Preference number: 6 (lower is better)
Translates to: ITNIWRLGSSQC*CVDCCFESEGS
Trigger: ACTGCCTTCACTCTCGAAGCAACAGTCGACACACCAACACTGGCTACTGCCAAGCCGCCATATGTTTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp CTGAGGGAGAAACTCTTCCTCTGTGACGAACATTCTTaGAAGGGATCTTTGACTTGGGGCTTGGCACGTCTC +
Preference number: 6 (lower is better)
Translates to: LREKLFLCDEHS*KGSLTWGLARL
Trigger: GAGACGTGCCAAGCCCCAAGTCAAAGATCCCTTCCAAGAATGTTCGTCACAGAGGAAGAGTTTCTCCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp CCGGGGAGGGCTGAATTGCTATGCAATTCGGATGTTTaGCTGGAGTCGCTAGGGAGAAAGGGGTTAGATGAA +
Preference number: 6 (lower is better)
Translates to: PGRAELLCNSDV*LESLGRKGLDE
Trigger: TTCATCTAACCCCTTTCTCCCTAGCGACTCCAGCAAAACATCCGAATTGCATAGCAATTCAGCCCTCCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp CTCTTCCTCTGTGACGAACATTCTTGGAAGGGATCTTaGACTTGGGGCTTGGCACGTCTCCATTTTCCGAGG +
Preference number: 6 (lower is better)
Translates to: LFLCDEHSWKGS*TWGLARLHFPR
Trigger: CCTCGGAAAATGGAGACGTGCCAAGCCCCAAGTCAAAGATCCCTTCCAAGAATGTTCGTCACAGAGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp TGTGGAAATGACTGGCGGACTCAGCATATGCCGCTGGTTGTCGCGTaGTGTTCTGCCAGCCCGATGTCACTTCTTCATCTTGTAAAGAAA +
Preference number: 6 (lower is better)
Translates to: CGNDWRTQHMPLVVA*CSASPMSLLHLVKK
Trigger: TTTCTTTACAAGATGAAGAAGTGACATCGGGCTGGCAGAACACAACGCGACAACCAGCGGCATATGCTGAGTCCGCCAGTCATTTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp TCCACAGGACCGGGGAGGGCTGAATTGCTATGCAATTCGGATGTTTaGCTGGAGTCGCTAGGGAGAAAGGGGTTAGATGAAACATCAGTT +
Preference number: 6 (lower is better)
Translates to: STGPGRAELLCNSDV*LESLGRKGLDETSV
Trigger: AACTGATGTTTCATCTAACCCCTTTCTCCCTAGCGACTCCAGCAAAACATCCGAATTGCATAGCAATTCAGCCCTCCCCGGTCCTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp CTCGCTGGACTCTTCACTGACCGTAGAGTCAGCATCTaGGGGAGAAACTCTTCCTCTGTGACGAACATTCTT +
Preference number: 6 (lower is better)
Translates to: LAGLFTDRRVSI*GRNSSSVTNIL
Trigger: AAGAATGTTCGTCACAGAGGAAGAGTTTCTCCCTCAGATGCTGACTCTACGGTCAGTGAAGAGTCCAGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp TTTCTGTTAAGGCCACTTGTGCAGCGCTGTGCCCAGTaGTTTTCTTCAGCACGAGCTCCATGGAGTATAAAG +
Preference number: 6 (lower is better)
Translates to: FLLRPLVQRCAQ*FSSARAPWSIK
Trigger: CTTTATACTCCATGGAGCTCGTGCTGAAGAAAAGCACTGGGCACAGCGCTGCACAAGTGGCCTTAACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp CAGAGAAGTCTGCTACGACGCTACTCATTAGAGAGATaGTGCTTTCTTCCAGCACGGTCATGCACAGAGTCT +
Preference number: 6 (lower is better)
Translates to: QRSLLRRYSLER*CFLPARSCTES
Trigger: AGACTCTGTGCATGACCGTGCTGGAAGAAAGCAGCATCTCTCTAATGAGTAGCGTCGTAGCAGACTTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp TGGAGAAACCATCCGTGGAGTGGTCCAGTGAGTATCTaGCAGAAAGTTATCCATCTCATCGTCATTGACGGC +
Preference number: 6 (lower is better)
Translates to: WRNHPWSGPVSI*QKVIHLIVIDG
Trigger: GCCGTCAATGACGATGAGATGGATAACTTTCTGCCAGATACTCACTGGACCACTCCACGGATGGTTTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp CGGAACTTGGCTGGAGCTGCGAAAACTCAAGATTTGTaGAACTGGGAAGAGACAGCTGAGATGACTGCAGAT +
Preference number: 6 (lower is better)
Translates to: RNLAGAAKTQDL*NWEETAEMTAD
Trigger: ATCTGCAGTCATCTCAGCTGTCTCTTCCCAGTTCCACAAATCTTGAGTTTTCGCAGCTCCAGCCAAGTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp TCAAAGAGAGCTGTCATTAGGCCTTTCTCAATGCGCTaGGTGAAGTTGCAGAAGCCAGTATCCACACTCGGA +
Preference number: 6 (lower is better)
Translates to: SKRAVIRPFSMR*VKLQKPVSTLG
Trigger: TCCGAGTGTGGATACTGGCTTCTGCAACTTCACCCAGCGCATTGAGAAAGGCCTAATGACAGCTCTCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp GGCGTAAAAACACTCGGGTCTCTGACGGCAAGCGACGGTGTGTTTTaGTTTGCTATGACAGAGAAAGATGAGTCAAGGAGAATGCTGGTG +
Preference number: 6 (lower is better)
Translates to: GVKTLGSLTASDGVF*FAMTEKDESRRMLV
Trigger: CACCAGCATTCTCCTTGACTCATCTTTCTCTGTCATAGCAAACAAAAACACACCGTCGCTTGCCGTCAGAGACCCGAGTGTTTTTACGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp GGCGTTGTGTGGACAGTGGTCAATGGTGATGTTGCTTaGATCCCGGCAGTCAAAATGTCAAAAGACTCAGAG +
Preference number: 6 (lower is better)
Translates to: GVVWTVVNGDVA*IPAVKMSKDSE
Trigger: CTCTGAGTCTTTTGACATTTTGACTGCCGGGATTCAAGCAACATCACCATTGACCACTGTCCACACAACGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp AGGAGAACTGTTCTGACCCAAGAGGACTTCAGCAACTaGGATAAGTTGAGCTGTGGATACTGGAAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: RRTVLTQEDFSN*DKLSCGYWKGS
Trigger: AGAGCCCTTCCAGTATCCACAGCTCAACTTATCTCAGTTGCTGAAGTCCTCTTGGGTCAGAACAGTTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp ATGGTGTTTAAAGGCAGCTCGGAACTTGGCTGGAGCTaGGAAAACTCAAGATTTGTGGAACTGGGAAGAGAC +
Preference number: 6 (lower is better)
Translates to: MVFKGSSELGWS*ENSRFVELGRD
Trigger: GTCTCTTCCCAGTTCCACAAATCTTGAGTTTTCGCAGCTCCAGCCAAGTTCCGAGCTGCCTTTAAACACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GAGAGATGGTTTCTTCTAGGCTTTGACTCAACACAGTaGTCACATCAGTGTATCTGTCTGCACTTGTGGCCC +
Preference number: 6 (lower is better)
Translates to: ERWFLLGFDSTQ*SHQCICLHLWP
Trigger: GGGCCACAAGTGCAGACAGATACACTGATGTGACCACTGTGTTGAGTCAAAGCCTAGAAGAAACCATCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp ACACTCGGGTCTCTGACGGCAAGCGACGGTGTGTTTTaGTTTGCTATGACAGAGAAAGATGAGTCAAGGAGA +
Preference number: 6 (lower is better)
Translates to: TLGSLTASDGVF*FAMTEKDESRR
Trigger: TCTCCTTGACTCATCTTTCTCTGTCATAGCAAACAAAAACACACCGTCGCTTGCCGTCAGAGACCCGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp GAGTATCTGGCAGAAAGTTATCCATCTCATCGTCATTaGCGGCCACCTCTTTACTCGTCACTGACACGTAAG +
Preference number: 6 (lower is better)
Translates to: EYLAESYPSHRH*RPPLYSSLTRK
Trigger: CTTACGTGTCAGTGACGAGTAAAGAGGTGGCCGTCAATGACGATGAGATGGATAACTTTCTGCCAGATACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp CATATCCACCTCGGCAGAAATGCCAACACTCGTCTCTaGGATTTCCATGGATCTAGAAGAAAGTGGGACGAT +
Preference number: 6 (lower is better)
Translates to: HIHLGRNANTRL*DFHGSRRKWDD
Trigger: ATCGTCCCACTTTCTTCTAGATCCATGGAAATCTCAGAGACGAGTGTTGGCATTTCTGCCGAGGTGGATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp AACATGATGGTGTTTAAAGGCAGCTCGGAACTTGGCTaGAGCTGCGAAAACTCAAGATTTGTGGAACTGGGA +
Preference number: 6 (lower is better)
Translates to: NMMVFKGSSELG*SCENSRFVELG
Trigger: TCCCAGTTCCACAAATCTTGAGTTTTCGCAGCTCCAGCCAAGTTCCGAGCTGCCTTTAAACACCATCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp TACTGTATTGGAGAAACCATCCGTGGAGTGGTCCAGTaGGTATCTGGCAGAAAGTTATCCATCTCATCGTCA +
Preference number: 6 (lower is better)
Translates to: YCIGETIRGVVQ*VSGRKLSISSS
Trigger: TGACGATGAGATGGATAACTTTCTGCCAGATACTCACTGGACCACTCCACGGATGGTTTCTCCAATACAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp CACCAGTGCAGTGACTGCGGATTCATGGGAAATGAGTaGAGACTCAAGATAGGAGGTAGTTTCAATGAAAGC +
Preference number: 6 (lower is better)
Translates to: HQCSDCGFMGNE*RLKIGGSFNES
Trigger: GCTTTCATTGAAACTACCTCCTATCTTGAGTCTTCACTCATTTCCCATGAATCCGCAGTCACTGCACTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp TGCACGGTTGAAGTGAATCCTCAGTACTTCTTTGATTaGTGTAATGATGTACTCCTGCACAGCTCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: CTVEVNPQYFFD*CNDVLLHSSSG
Trigger: GCCAGAAGAGCTGTGCAGGAGTACATCATTACAGCAATCAAAGAAGTACTGAGGATTCACTTCAACCGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp AATGACACCTTGAATTCGGTAACCCAAGATGATGGCTaGTCTCTGGAGGTCCATTTTGTTAATCAGGTCCGA +
Preference number: 6 (lower is better)
Translates to: NDTLNSVTQDDG*SLEVHFVNQVR
Trigger: TCGGACCTGATTAACAAAATGGACCTCCAGAGAGCAGCCATCATCTTGGGTTACCGAATTCAAGGTGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp TACTCGTCACTGACACGTAAGTTGCCACAAAGATGCTaGGATCTGCTGTACTTTTGGTCTGTTTTCCTTGGT +
Preference number: 6 (lower is better)
Translates to: YSSLTRKLPQRC*DLLYFWSVFLG
Trigger: ACCAAGGAAAACAGACCAAAAGTACAGCAGATCCCAGCATCTTTGTGGCAACTTACGTGTCAGTGACGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GCTGACTGTGATATACTGTATTGGAGAAACCATCCGTaGAGTGGTCCAGTGAGTATCTGGCAGAAAGTTATC +
Preference number: 6 (lower is better)
Translates to: ADCDILYWRNHP*SGPVSIWQKVI
Trigger: GATAACTTTCTGCCAGATACTCACTGGACCACTCCACGGATGGTTTCTCCAATACAGTATATCACAGTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp GAGGCACAAACTGAAGTACTGTTTGAACTTGGAACCTaGACTCTGGCACAAGGAAAGAAGGTTTCACAGACA +
Preference number: 6 (lower is better)
Translates to: EAQTEVLFELGT*TLAQGKKVSQT
Trigger: TGTCTGTGAAACCTTCTTTCCTTGTGCCAGAGTCCAGGTTCCAAGTTCAAACAGTACTTCAGTTTGTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp AAATGGGCGTTGTGTGGACAGTGGTCAATGGTGATGTaGCTTGAATCCCGGCAGTCAAAATGTCAAAAGACT +
Preference number: 6 (lower is better)
Translates to: KWALCGQWSMVM*LESRQSKCQKT
Trigger: AGTCTTTTGACATTTTGACTGCCGGGATTCAAGCAACATCACCATTGACCACTGTCCACACAACGCCCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 90 bp AGAAAGTGGGACGATAGGTCTGGAGGGGAAAAGCGTATTAAATACTaGAGGATCTTCCTCAAATTCAGAGAAGTCTGCTACGACGCTACT +
Preference number: 6 (lower is better)
Translates to: RKWDDRSGGEKRIKY*RIFLKFREVCYDAT
Trigger: AGTAGCGTCGTAGCAGACTTCTCTGAATTTGAGGAAGATCCTCAAGTATTTAATACGCTTTTCCCCTCCAGACCTATCGTCCCACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp GGGTATGTTCTTGGAGAGATGGTTTCTTCTAGGCTTTaGCTCAACACAGTGGTCACATCAGTGTATCTGTCT +
Preference number: 6 (lower is better)
Translates to: GYVLGEMVSSRL*LNTVVTSVYLS
Trigger: AGACAGATACACTGATGTGACCACTGTGTTGAGTCAAAGCCTAGAAGAAACCATCTCTCCAAGAACATACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp CTTTACTCGTCACTGACACGTAAGTTGCCACAAAGATaGTGGGATCTGCTGTACTTTTGGTCTGTTTTCCTT +
Preference number: 6 (lower is better)
Translates to: LYSSLTRKLPQR*WDLLYFWSVFL
Trigger: AAGGAAAACAGACCAAAAGTACAGCAGATCCCAGCATCTTTGTGGCAACTTACGTGTCAGTGACGAGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp GAGGTCCATTTTGTTAATCAGGTCCGAAGACTTGACTaGACTGAGTCTTTCTCCATCTTGATCCTCCACAAA +
Preference number: 6 (lower is better)
Translates to: EVHFVNQVRRLD*TESFSILILHK
Trigger: TTTGTGGAGGATCAAGATGGAGAAAGACTCAGTGCAGTCAAGTCTTCGGACCTGATTAACAAAATGGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp AATCCAAAGCACCTCTGGGTTTATGCTCAGAAAAACTaGAACGTTCTTGGTCAGAGAAAAGTGAAGACTCCA +
Preference number: 6 (lower is better)
Translates to: NPKHLWVYAQKN*NVLGQRKVKTP
Trigger: TGGAGTCTTCACTTTTCTCTGACCAAGAACGTTCCAGTTTTTCTGAGCATAAACCCAGAGGTGCTTTGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CAA 72 bp GACGATAGGTCTGGAGGGGAAAAGCGTATTAAATACTaGAGGATCTTCCTCAAATTCAGAGAAGTCTGCTAC +
Preference number: 6 (lower is better)
Translates to: DDRSGGEKRIKY*RIFLKFREVCY
Trigger: GTAGCAGACTTCTCTGAATTTGAGGAAGATCCTCAAGTATTTAATACGCTTTTCCCCTCCAGACCTATCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp CTCAAGATTTGTGGAACTGGGAAGAGACAGCTGAGATaGCTGCAGATCACTAGAGTCAAACAATGTAAATGT +
Preference number: 6 (lower is better)
Translates to: LKICGTGKRQLR*LQITRVKQCKC
Trigger: ACATTTACATTGTTTGACTCTAGTGATCTGCAGTCATCTCAGCTGTCTCTTCCCAGTTCCACAAATCTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS TCA 72 bp GAAAACTCAAGATTTGTGGAACTGGGAAGAGACAGCTaGGATGACTGCAGATCACTAGAGTCAAACAATGTA +
Preference number: 6 (lower is better)
Translates to: ENSRFVELGRDS*DDCRSLESNNV
Trigger: TACATTGTTTGACTCTAGTGATCTGCAGTCATCTCAGCTGTCTCTTCCCAGTTCCACAAATCTTGAGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS CCA 72 bp AGGAAAGAAGGTTTCACAGACAGGATTAAAGGAGTCTaGTCACGGACAAGCTTACTGTTTATAAGCACATTT +
Preference number: 6 (lower is better)
Translates to: RKEGFTDRIKGV*SRTSLLFISTF
Trigger: AAATGTGCTTATAAACAGTAAGCTTGTCCGTGACCAGACTCCTTTAATCCTGTCTGTGAAACCTTCTTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5
CDS GCA 72 bp AAGCTTACTGTTTATAAGCACATTTATGACGGATATTaGCGTGTAAACGAAAGGACCGGATGTTACCAGAAA +
Preference number: 6 (lower is better)
Translates to: KLTVYKHIYDGY*RVNERTGCYQK
Trigger: TTTCTGGTAACATCCGGTCCTTTCGTTTACACGGCAATATCCGTCATAAATGTGCTTATAAACAGTAAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422774.2
ENST00000440172.5