RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA0319L (Homo sapiens)

Ensembl gene IDs: ENSG00000142687

Ensembl transcript IDs: ENST00000325722.8, ENST00000373266.8, ENST00000426982.6, ENST00000431916.5, ENST00000440579.5, ENST00000461312.5, ENST00000467109.1, ENST00000469892.5, ENST00000470388.5, ENST00000473423.1, ENST00000473465.1, ENST00000473844.1, ENST00000474856.1, ENST00000476329.1, ENST00000478463.6, ENST00000482929.6, ENST00000485551.5, ENST00000492544.1, ENST00000492888.1, ENST00000494948.1

Found 527 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTCTGACAAGGGCCCTGGCAGCGAGAGAGGCCACCCGCCATCCCTaGCACAGTCAATCCTCCCTAATCTCGGGCCGGATGGGAGAAGGG +
Preference number: 1 (lower is better)
Translates to: ALTRALAAREATRHP*HSQSSLISGRMGEG
Trigger: CCCTTCTCCCATCCGGCCCGAGATTAGGGAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCTCTCGCTGCCAGGGCCCTTGTCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR GCA 90 bp TGGGACTGTCAGGGCGAAATGACCAGCAGATGCTGGGACAGCAGCTaGCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCT +
Preference number: 1 (lower is better)
Translates to: WDCQGEMTSRCWDSS*PQTREVGGLAGQCA
Trigger: AGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR CCA 90 bp GCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTaGGGAGCTGCAGAGCTTAGCAGCTGGCTGGGTCTGCCCTCGGGG +
Preference number: 1 (lower is better)
Translates to: AGLTLQHSGHNDTVH*GAAELSSWLGLPSG
Trigger: CCCCGAGGGCAGACCCAGCCAGCTGCTAAGCTCTGCAGCTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR CCA 90 bp AGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATGCTaGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCC +
Preference number: 1 (lower is better)
Translates to: RGSGWDCQGEMTSRC*DSSCPQTREVGGLA
Trigger: GGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR TCA 90 bp CCGCGCCCGGCCATCATTTCTATGCTACCATCTCAGCATCTGTGGTaGGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTA +
Preference number: 1 (lower is better)
Translates to: PRPAIISMLPSQHLW*GEGCHFLFAQREGV
Trigger: TACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGATGCTGAGATGGTAGCATAGAAATGATGGCCGGGCGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR GCA 90 bp TTGGTTTTGCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTaGAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGCTGCAG +
Preference number: 1 (lower is better)
Translates to: LVLHSGVRAAQQASP*STLGTMTLSTGELQ
Trigger: CTGCAGCTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGCAAAACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR GCA 90 bp GAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCCCACAGTaGTTGGTTTTGCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCA +
Preference number: 1 (lower is better)
Translates to: ERAYSTPERETPCPQ*LVLHSGVRAAQQAS
Trigger: TGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGCAAAACCAAGCACTGTGGGCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR GCA 90 bp TTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATaGCCACAGTGCTTGGTTTTGCACTCAGGTGTGCGGGCAGCACAG +
Preference number: 1 (lower is better)
Translates to: LPSERAYSTPERETP*PQCLVLHSGVRAAQ
Trigger: CTGTGCTGCCCGCACACCTGAGTGCAAAACCAAGCACTGTGGGCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR TCA 90 bp CACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTaGGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGGGTT +
Preference number: 1 (lower is better)
Translates to: HQTGLKRKPLHSQLR*GVPGGRLWIQVPGV
Trigger: AACCCCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR TCA 90 bp AGTCTTTCCAAGTCAAATTTGCCTTGTGAGCAGCCAAGAGCCCAATaGGTTGATGCATACGCGCTCACTCTAACACGCACACATGCAAGG +
Preference number: 1 (lower is better)
Translates to: SLSKSNLPCEQPRAQ*VDAYALTLTRTHAR
Trigger: CCTTGCATGTGTGCGTGTTAGAGTGAGCGCGTATGCATCAACTCATTGGGCTCTTGGCTGCTCACAAGGCAAATTTGACTTGGAAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR GCA 90 bp GGAAGTCTTGGTTCCAAGGAGATGAAAGTCTTTCCAAGTCAAATTTaGCTTGTGAGCAGCCAAGAGCCCAATGAGTTGATGCATACGCGC +
Preference number: 1 (lower is better)
Translates to: GSLGSKEMKVFPSQI*LVSSQEPNELMHTR
Trigger: GCGCGTATGCATCAACTCATTGGGCTCTTGGCTGCTCACAAGGCAAATTTGACTTGGAAAGACTTTCATCTCCTTGGAACCAAGACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR-3UTR GCA 90 bp CCTCTGGGGACAGGGAGCGGTGGCCTAAGCCCCGAAGCAGCAGGTGCCGGTCAGCACAGTGCTTGGTTTTaGACTCAGGTGTGCGGGCAG +
Preference number: 2 (lower is better)
Translates to: PLGTGSGGLSPEAAGAGQHSAWF*TQVCGQ
Trigger: CTGCCCGCACACCTGAGTGCAAAACCAAGCACTGTG...CTGACCGGCACCTGCTGCTTCGGGGCTTAGGCCACCGCTCCCTGTCCCCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR-3UTR CCA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAAGTCCCAGGGGTTCTaGTTGGGACTGTCAGGGCGA +
Preference number: 2 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHKSQGF*LGLSGR
Trigger: TCGCCCTGACAGTCCCAACCAGAACCCCTGGGACTT...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR TCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGCACTCTGGGCACAATaGCACTGTCCACTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: RGATSSLPSERAYSTPERALWAQ*HCPLGS
Trigger: GCTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGC...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR GCA 90 bp AGAGGCCACCCGCCATCCCTGACACAGTCAATCCTCCCTAATCTCGGGCCGGATCAGTGTGCTGGGCCCTaGCCTGAGGAGACAGACCAG +
Preference number: 2 (lower is better)
Translates to: RGHPPSLTQSILPNLGPDQCAGP*PEETDQ
Trigger: CTGGTCTGTCTCCTCAGGGCAGGGCCCAGCACACTG...ATCCGGCCCGAGATTAGGGAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR-3UTR GCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGCTGGGACAGCAGCTaGCCGCAGACTCGGGAGGTA +
Preference number: 2 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHCWDSS*PQTREV
Trigger: TACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCAGCA...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR GCA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCAGCAGGCCTCACCTTaGAGCACTCTGGGCACAATG +
Preference number: 2 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTQQASP*STLGTM
Trigger: CATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR CCA 90 bp CGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGGACAGGCAGAGCTTAGCAGCTaGCTGGGTCTGCCCTCGGGG +
Preference number: 2 (lower is better)
Translates to: RSHATTFQSIWGYLLWGQAELSS*LGLPSG
Trigger: CCCCGAGGGCAGACCCAGCCAGCTGCTAAGCTCTGC...CTGTCCCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR CAA 90 bp CTTGGTTTTGCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTaGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: LGFALRCAGSTAGLT*QHSGHNDTVHWGAA
Trigger: TGCAGCTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGCAAAACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR TCA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGACTGTCAGGGCGAAATaGCCAGCAGATGCTGGGACA +
Preference number: 2 (lower is better)
Translates to: QQASPCSTLGTMTLSTGETVRAK*PADAGT
Trigger: TGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGT...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR TCA 90 bp GGACCACAGCGGGGCCATCGCACACATGCGCTCTCATGCCACAACATTCCAGTCCATTCACAGCTTCGTTaGGGGGTTCCTGGAGGACGT +
Preference number: 2 (lower is better)
Translates to: GPQRGHRTHALSCHNIPVHSQLR*GVPGGR
Trigger: ACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAATG...GACTGGAATGTTGTGGCATGAGAGCGCATGTGTGCGATGGCCCCGCTGTGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR-3UTR TCA 90 bp GCACACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCAAGGAGGCCCTGAGGTaGGGATATCTGGGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: AHMRSHATTFQSIWGYLLKEALR*GYLGAH
Trigger: GTGGGCCCCCAGATATCCTCACCTCAGGGCCTCCTT...GAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR-3UTR CCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCCCCAGGGGTTCTGGTTaGGACTGTCAGGGCGAAATG +
Preference number: 2 (lower is better)
Translates to: SSLPSERAYSTPERETPCPRGSG*DCQGEM
Trigger: CATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGG...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR CCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGAATGACACTGTCCACTaGGGAGCTGCAGAGCTTAGC +
Preference number: 2 (lower is better)
Translates to: RGATSSLPSERAYSTPERNDTVH*GAAELS
Trigger: GCTAAGCTCTGCAGCTCCCCAGTGGACAGTGTCATT...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR CCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGCATGCCCACAGTGCTTaGTTTTGCACTCAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: RGATSSLPSERAYSTPERHAHSA*FCTQVC
Trigger: GCACACCTGAGTGCAAAACCAAGCACTGTGGGCATG...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR TCA 90 bp ACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGGTGGTCTTGATCTCCTaGCCTCATGATCCGCCCGCC +
Preference number: 2 (lower is better)
Translates to: TCALMPQHSSPSGAISSGVVLIS*PHDPPA
Trigger: GGCGGGCGGATCATGAGGTCAGGAGATCAAGACCAC...CCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR-3UTR CCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCTCGTTGAGGGGTTCCTaGAGGACGTCTCTGGATTCA +
Preference number: 2 (lower is better)
Translates to: SSLPSERAYSTPERETPCSLRGS*RTSLDS
Trigger: TGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGA...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR TCA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGACTGTCAGGGCGAAATaGCCAGCAGATGCTGGGACA +
Preference number: 2 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRTVRAK*PADAGT
Trigger: TGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGT...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR CCA 90 bp AGGCCTGGAGTGAGCTTCGATAGTTTGAGGATCTGGGAATGTTTCCCTTCCATTGTAGGAGGGAGCCACTaGCTGGGGGACAGCAATCTG +
Preference number: 2 (lower is better)
Translates to: RPGVSFDSLRIWECFPSIVGGSH*LGDSNL
Trigger: CAGATTGCTGTCCCCCAGCCAGTGGCTCCCTCCTAC...AATGGAAGGGAAACATTCCCAGATCCTCAAACTATCGAAGCTCACTCCAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470388.5
3UTR CAA 90 bp CCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTaGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGGGT +
Preference number: 2 (lower is better)
Translates to: PPDRFKEETSSFTAS*RGSWRTSLDSSPRG
Trigger: ACCCCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR CCA 90 bp ACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTCCTGGAACTGAGGATTCTTACGGGGCTCTaGCTTGACTGTCACGTTCAC +
Preference number: 2 (lower is better)
Translates to: TAINDCRSGWQRDLLELRILTGL*LDCHVH
Trigger: GTGAACGTGACAGTCAAGCCAGAGCCCCGTAAGAAT...CCTCAGTTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
3UTR-3UTR TCA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCTACGGGGCTCTGGCTTaGCTGTCACGTTCACATAGC +
Preference number: 2 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGYGALA*LSRSHS
Trigger: GCTATGTGAACGTGACAGTCAAGCCAGAGCCCCGTA...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482929.6
3UTR-3UTR GCA 90 bp ACCATGTTTAATCATCCCACAATGGACAGTAGTGCAGTAGTAGAAATTATAAGTTCTGTCCAGCCTGGCTaGTCTGACAAGGGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: TMFNHPTMDSSAVVEIISSVQPG*SDKGPG
Trigger: GCCAGGGCCCTTGTCAGAGCAGCCAGGCTGGACAGA...ACTTATAATTTCTACTACTGCACTACTGTCCATTGTGGGATGATTAAACATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR-3UTR TCA 90 bp ATGAGTAATCAGCTGCCAGTCGTAGGTGTAGGTTTCTCCTTTAGGTGGTTCTTGGAACTTTTTACTTGTTaGGTGCTGGGCGTAGTAGCA +
Preference number: 2 (lower is better)
Translates to: MSNQLPVVGVGFSFRWFLELFTC*VLGVVA
Trigger: TGCTACTACGCCCAGCACTCAACAAGTAAAAAGTTC...CAAGAACCACCTAAAGGAGAAACCTACACCTACGACTGGCAGCTGATTACTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470388.5
3UTR-3UTR CCA 90 bp ACCATGTTTAATCATCCCACAATGGACAGTAGTGCAGTAGTAGAAATTATAAGTATGACCAGCAGATGCTaGGACAGCAGCTGCCCGCAG +
Preference number: 2 (lower is better)
Translates to: TMFNHPTMDSSAVVEIISMTSRC*DSSCPQ
Trigger: CTGCGGGCAGCTGCTGTCCCAGCATCTGCTGGTCAT...ACTTATAATTTCTACTACTGCACTACTGTCCATTGTGGGATGATTAAACATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR-3UTR CCA 90 bp TCCACTGTAGTCTCTAGGATGAGTAATCAGCTGCCAGTCGTAGGTGTAGGTTTCTGGGGGACAGCAATCTaGGTTTTCTCAGAACTTTTT +
Preference number: 2 (lower is better)
Translates to: STVVSRMSNQLPVVGVGFWGTAI*VFSELF
Trigger: AAAAAGTTCTGAGAAAACCCAGATTGCTGTCCCCCA...GAAACCTACACCTACGACTGGCAGCTGATTACTCATCCTAGAGACTACAGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470388.5
3UTR-3UTR GCA 90 bp ACCATGTTTAATCATCCCACAATGGACAGTAGTGCAGTAGTAGAAATTATAAGTCAGCAGGCCTCACCTTaGAGCACTCTGGGCACAATG +
Preference number: 2 (lower is better)
Translates to: TMFNHPTMDSSAVVEIISQQASP*STLGTM
Trigger: CATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG...ACTTATAATTTCTACTACTGCACTACTGTCCATTGTGGGATGATTAAACATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR GCA 72 bp GACAGGGAGCGGTGGCCTAAGCCCCGAAGCAGCAGGTaGCGGTCAGATGGAGAGGAGGGAGGCCGTCTGTCC +
Preference number: 3 (lower is better)
Translates to: DRERWPKPRSSR*RSDGEEGGRLS
Trigger: GGACAGACGGCCTCCCTCCTCTCCATCTGACCGGCACCTGCTGCTTCGGGGCTTAGGCCACCGCTCCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR GCA 72 bp CAGGGCGAAATGACCAGCAGATGCTGGGACAGCAGCTaGCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGG +
Preference number: 3 (lower is better)
Translates to: QGEMTSRCWDSS*PQTREVGGLAG
Trigger: CCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCAGCATCTGCTGGTCATTTCGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR TCA 72 bp AGGGCCCTGGCAGCGAGAGAGGCCACCCGCCATCCCTaGCACAGTCAATCCTCCCTAATCTCGGGCCGGATG +
Preference number: 3 (lower is better)
Translates to: RALAAREATRHP*HSQSSLISGRM
Trigger: CATCCGGCCCGAGATTAGGGAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCTCTCGCTGCCAGGGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR-3UTR CAA 90 bp AAGGGCCCTGGCAGCGAGAGAGGCCACCCGCCATCCCTGACACAGTCAATCCTCTCCCAGGGGTTCTGGTaGGGACTGTCAGGGCGAAAT +
Preference number: 3 (lower is better)
Translates to: KGPGSERGHPPSLTQSILSQGFW*GLSGRN
Trigger: ATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGGA...GAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCTCTCGCTGCCAGGGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR GCA 72 bp CACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTaGAGCACTCTGGGCACAATGACACTGTCCACTGGG +
Preference number: 3 (lower is better)
Translates to: HSGVRAAQQASP*STLGTMTLSTG
Trigger: CCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR GCA 72 bp GACAGAGAGGGGACCACAGCGGGGCCATCGCACACATaGGCTCTCATGCCACAACATTCCAGTCCATCTGGG +
Preference number: 3 (lower is better)
Translates to: DREGTTAGPSHT*ALMPQHSSPSG
Trigger: CCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGCGATGGCCCCGCTGTGGTCCCCTCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR-3UTR CAA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGTCATTCACAGCTTCGTaGAGGGGTTCCTGGAGGACG +
Preference number: 3 (lower is better)
Translates to: RGATSSLPSERAYSTPERSFTAS*RGSWRT
Trigger: CGTCCTCCAGGAACCCCTCAACGAAGCTGTGAATGA...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR CAA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCCATGCCCACAGTGCTaGGTTTTGCACTCAGGTGTG +
Preference number: 3 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTPCPQC*VLHSGV
Trigger: CACACCTGAGTGCAAAACCAAGCACTGTGGGCATGG...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR GCA 72 bp GGACCACAGCGGGGCCATCGCACACATGCGCTCTCATaGCACAACATTCCAGTCCATCTGGGGCTATCTCCT +
Preference number: 3 (lower is better)
Translates to: GPQRGHRTHALS*HNIPVHLGLSP
Trigger: AGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGCGATGGCCCCGCTGTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR GCA 72 bp GAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATaGCCACAGTGCTTGGTTTTGCACTCAGGTGTGCGG +
Preference number: 3 (lower is better)
Translates to: ERAYSTPERETP*PQCLVLHSGVR
Trigger: CCGCACACCTGAGTGCAAAACCAAGCACTGTGGGCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR-3UTR CAA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCTCCCAGGGGTTCTGGTaGGGACTGTCAGGGCGAAAT +
Preference number: 3 (lower is better)
Translates to: PDRFKEETSSFTASLRGSSQGFW*GLSGRN
Trigger: ATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGGA...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR TCA 72 bp GGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTaGGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTC +
Preference number: 3 (lower is better)
Translates to: GLKRKPLHSQLR*GVPGGRLWIQV
Trigger: GACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
3UTR TCA 72 bp AAGTCAAATTTGCCTTGTGAGCAGCCAAGAGCCCAATaGGTTGATGCATACGCGCTCACTCTAACACGCACA +
Preference number: 3 (lower is better)
Translates to: KSNLPCEQPRAQ*VDAYALTLTRT
Trigger: TGTGCGTGTTAGAGTGAGCGCGTATGCATCAACTCATTGGGCTCTTGGCTGCTCACAAGGCAAATTTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR-3UTR CAA 90 bp AACTTCATTCTTAGGCAGGGTTATCTGGACACTCTCTCCAGCAGATACCACCAGCTCAGAACTTTTTACTaGTTGAGTGCTGGGCGTAGT +
Preference number: 3 (lower is better)
Translates to: NFILRQGYLDTLSSRYHQLRTFY*LSAGRS
Trigger: ACTACGCCCAGCACTCAACAAGTAAAAAGTTCTGAG...CTGGTGGTATCTGCTGGAGAGAGTGTCCAGATAACCCTGCCTAAGAATGAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470388.5
3UTR-3UTR CAA 90 bp GGAGTGAGCTTCGATAGTTTGAGGATCTGGGAATGTTTCCCTTCCATTTCTCCAAGAACTTTTTACTTGTaGAGTGCTGGGCGTAGTAGC +
Preference number: 3 (lower is better)
Translates to: GVSFDSLRIWECFPSISPRTFYL*SAGRSS
Trigger: GCTACTACGCCCAGCACTCAACAAGTAAAAAGTTCT...TGGAGAAATGGAAGGGAAACATTCCCAGATCCTCAAACTATCGAAGCTCACTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470388.5
3UTR GCA 72 bp GGTTCCAAGGAGATGAAAGTCTTTCCAAGTCAAATTTaGCTTGTGAGCAGCCAAGAGCCCAATGAGTTGATG +
Preference number: 3 (lower is better)
Translates to: GSKEMKVFPSQI*LVSSQEPNELM
Trigger: CATCAACTCATTGGGCTCTTGGCTGCTCACAAGGCAAATTTGACTTGGAAAGACTTTCATCTCCTTGGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
3UTR TCA 72 bp TCTCTTAGAGGCCCCTTAAGTTCTTCCCAATGGTACTaGACGATTTTATCATCATCAGTGGACTGCCATCAA +
Preference number: 3 (lower is better)
Translates to: SLRGPLSSSQWY*TILSSSVDCHQ
Trigger: TTGATGGCAGTCCACTGATGATGATAAAATCGTTCAGTACCATTGGGAAGAACTTAAGGGGCCTCTAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCCTCCGCCTCCTCCTaGTCCATGGGCTCGGGGACC +
Preference number: 4 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCASASS*SMGSGT
Trigger: GGTCCCCGAGCCCATGGACCAGGAGGAGGCGGAGGC...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp CCTCTGGGGACAGGGAGCGGTGGCCTAAGCCCCGAAGCAGCAGGTGCCGGTCAGAGCTTAGCAGCTGGCTaGGTCTGCCCTCGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PLGTGSGGLSPEAAGAGQSLAAG*VCPRGR
Trigger: CCTCCCCCGAGGGCAGACCCAGCCAGCTGCTAAGCT...CTGACCGGCACCTGCTGCTTCGGGGCTTAGGCCACCGCTCCCTGTCCCCAGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp CCTCTGGGGACAGGGAGCGGTGGCCTAAGCCCCGAAGCAGCAGGTGCCGGTCAGCACCTCCCCTGCTGCTaGGCTCCCCTCATCTCGAGT +
Preference number: 4 (lower is better)
Translates to: PLGTGSGGLSPEAAGAGQHLPCC*APLISS
Trigger: ACTCGAGATGAGGGGAGCCCAGCAGCAGGGGAGGTG...CTGACCGGCACCTGCTGCTTCGGGGCTTAGGCCACCGCTCCCTGTCCCCAGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp CCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCCATTCACAGCTTCGTTaGGGGGTTCCTGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: PADSGGRRTGRAVCWALPHSQLR*GVPGGR
Trigger: ACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAATG...GGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp AAGGGCCCTGGCAGCGAGAGAGGCCACCCGCCATCCCTGACACAGTCAATCCTCCCAGCCTGGCTGCTCTaGCAAGGGCCCTGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: KGPGSERGHPPSLTQSILPAWLL*QGPWQR
Trigger: TCGCTGCCAGGGCCCTTGTCAGAGCAGCCAGGCTGG...GAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCTCTCGCTGCCAGGGCCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp GGGCCGATTCTTACGGGGCTCTGGCTTGACTGTCACGTTCACATAGCCTTCCCCGGGGCCGCAGCCTGGTaGGCTCAGCCCCCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: GPILTGLWLDCHVHIAFPGAAAW*AQPPSG
Trigger: GCCCGAAGGGGGCTGAGCTCACCAGGCTGCGGCCCC...GGGGAAGGCTATGTGAACGTGACAGTCAAGCCAGAGCCCCGTAAGAATCGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR GCA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTCAGTGTGCTGGGCCCTaGCCTGAGGAGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCQCAGP*PEETDQ
Trigger: CTGGTCTGTCTCCTCAGGGCAGGGCCCAGCACACTG...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTCACCTCCCCTGCTGCTaGGCTCCCCTCATCTCGAGT +
Preference number: 4 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCHLPCC*APLISS
Trigger: ACTCGAGATGAGGGGAGCCCAGCAGCAGGGGAGGTG...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAGCTTAGCAGCTGGCTaGGTCTGCCCTCGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHSLAAG*VCPRGR
Trigger: CCTCCCCCGAGGGCAGACCCAGCCAGCTGCTAAGCT...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp ACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCTGAGGAGCCCCAATCTGGCGGATaGACATCCCCTTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: TREVGGLAGQCAGPCPEEPQSGG*TSPSAS
Trigger: AGAGGCTGAAGGGGATGTTCATCCGCCAGATTGGGG...CTCCTCAGGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp CCTCTGGGGACAGGGAGCGGTGGCCTAAGCCCCGAAGCAGCAGGTGCCGGTCAGGGGCCTGCTGCAGTCTaGCTGAATGCACATCCCTTC +
Preference number: 4 (lower is better)
Translates to: PLGTGSGGLSPEAAGAGQGPAAV*LNAHPF
Trigger: GAAGGGATGTGCATTCAGGCAGACTGCAGCAGGCCC...CTGACCGGCACCTGCTGCTTCGGGGCTTAGGCCACCGCTCCCTGTCCCCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp CCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCAGCTCTGACTCGGAGTaGATCAGGCTGCTACTTAGC +
Preference number: 4 (lower is better)
Translates to: PADSGGRRTGRAVCWALPSSDSE*IRLLLS
Trigger: GCTAAGTAGCAGCCTGATGCACTCCGAGTCAGAGCT...GGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCCTTCAGAGGGGTCTaGCCGTTGGGTACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCAFRGV*PLGTEP
Trigger: TGGCTCTGTACCCAACGGGCAGACCCCTCTGAAGGC...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGTAGGAGGGAGCCACTaGCTGGGGGACAGCAATCTG +
Preference number: 4 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCVGGSH*LGDSNL
Trigger: CAGATTGCTGTCCCCCAGCCAGTGGCTCCCTCCTAC...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACGGCAGGGTGATCACTTaGTTGGGGCCTGCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHGRVIT*LGPALA
Trigger: GGCCAACGCAGGCCCCAACCAAGTGATCACCCTGCC...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp CCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCGTTTCACCTCCACAGTaGTCCGGTCTGTGTCACTCT +
Preference number: 4 (lower is better)
Translates to: PADSGGRRTGRAVCWALPVSPPQ*SGLCHS
Trigger: AGAGTGACACAGACCGGACCACTGTGGAGGTGAAAC...GGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCCTGCTCGGGAGGTTaGCTTCAGCTCCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCACSGG*LQLQAF
Trigger: GAAAGCCTGGAGCTGAAGCCAACCTCCCGAGCAGGC...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp CCTCTGGGGACAGGGAGCGGTGGCCTAAGCCCCGAAGCAGCAGGTGCCGGTCAGGAGGGGTCTGCCCGTTaGGTACAGAGCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: PLGTGSGGLSPEAAGAGQEGSAR*VQSHSD
Trigger: GTCAGAATGGCTCTGTACCCAACGGGCAGACCCCTC...CTGACCGGCACCTGCTGCTTCGGGGCTTAGGCCACCGCTCCCTGTCCCCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTATGACCAGCAGATGCTaGGACAGCAGCTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCMTSRC*DSSCPQ
Trigger: CTGCGGGCAGCTGCTGTCCCAGCATCTGCTGGTCAT...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACGCTCTGGGTGGGCTCTaGCTCCAAGATGCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHALGGL*LQDAQF
Trigger: GAACTGGGCATCTTGGAGGCAGAGCCCACCCAGAGC...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp CCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCCATCTGAGCTCTTGCTaGCATCCAGGGTTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: PADSGGRRTGRAVCWALPHLSSC*HPGLCY
Trigger: ATAGCACAACCCTGGATGGCAGCAAGAGCTCAGATG...GGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp AAGGGCCCTGGCAGCGAGAGAGGCCACCCGCCATCCCTGACACAGTCAATCCTCTGCTGGGACAGCAGCTaGCCGCAGACTCGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: KGPGSERGHPPSLTQSILCWDSS*PQTREV
Trigger: TACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCAGCA...GAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCTCTCGCTGCCAGGGCCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACGAGTGCAGCTCTGGGTaGGCTCTGCCTCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHECSSG*ALPPRC
Trigger: GCATCTTGGAGGCAGAGCCCACCCAGAGCTGCACTC...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGAGGGGTCTGCCCGTTaGGTACAGAGCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCEGSAR*VQSHSD
Trigger: GTCAGAATGGCTCTGTACCCAACGGGCAGACCCCTC...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCCCTCCCGCGGGCTCCTaGCCTTCAGAGGGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCPPAGS*PSEGSA
Trigger: GGCAGACCCCTCTGAAGGCCAGGAGCCCGCGGGAGG...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp GGGCCGATTCTTACGGGGCTCTGGCTTGACTGTCACGTTCACATAGCCTTCCCCAGAGCGGTGCGGGGGTaGGGGTGGAGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPILTGLWLDCHVHIAFPRAVRG*GWSCSS
Trigger: GCTGCTGCAGCTCCACCCCCACCCCCGCACCGCTCT...GGGGAAGGCTATGTGAACGTGACAGTCAAGCCAGAGCCCCGTAAGAATCGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp ACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCTGAGGAGGGGCCTGCATCTGCCTaGGGAGGCTTATTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: TREVGGLAGQCAGPCPEEGPASA*GGLLFS
Trigger: TGAAAACAATAAGCCTCCTCAGGCAGATGCAGGCCC...CTCCTCAGGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp GGGCCGATTCTTACGGGGCTCTGGCTTGACTGTCACGTTCACATAGCCTTCCCCGGCCAGAGCCCGGAGTaGAGCAGCCGCGGATTCGTC +
Preference number: 4 (lower is better)
Translates to: GPILTGLWLDCHVHIAFPGQSPE*SSRGFV
Trigger: GACGAATCCGCGGCTGCTTCACTCCGGGCTCTGGCC...GGGGAAGGCTATGTGAACGTGACAGTCAAGCCAGAGCCCCGTAAGAATCGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR GCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGTGCTGGGACAGCAGCTaGCCGCAGACTCGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: RGATSSLPSERAYSTPERCWDSS*PQTREV
Trigger: TACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCAGCA...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACGTGCCACTTCCTCTTTaGCCAGCGAGAGGGCGTACT +
Preference number: 4 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHVPLPL*PARGRT
Trigger: AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCAC...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp CGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGGACAGTCGCCTCAGCCTCCCTaGACAGCGACGGCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: RSHATTFQSIWGYLLWGQSPQPP*TATAAG
Trigger: TCCGGCCGCCGTCGCTGTCCAGGGAGGCTGAGGCGA...CTGTCCCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCCCTCCTCCTGGTCCATaGGCTCGGGGACCCCCAACC +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCPPPGP*ARGPPT
Trigger: GGTTGGGGGTCCCCGAGCCCATGGACCAGGAGGAGG...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACCCAGCCTCTTCTCCATaGCCCTCCAGACAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHPASSP*PSRQAE
Trigger: TTCTGCCTGTCTGGAGGGCCATGGAGAAGAGGCTGG...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp CCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCCCAGGTTGTTTTTCCTaGGATCAGGTTTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PADSGGRRTGRAVCWALPPGCFS*DQVSPP
Trigger: TGGAGGTGAAACCTGATCCCAGGAAAAACAACCTGG...GGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACGCAGAGCTTAGCAGCTaGCTGGGTCTGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHAELSS*LGLPSG
Trigger: CCCCGAGGGCAGACCCAGCCAGCTGCTAAGCTCTGC...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp CCTCTGGGGACAGGGAGCGGTGGCCTAAGCCCCGAAGCAGCAGGTGCCGGTCAGAATGACACTGTCCACTaGGGAGCTGCAGAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: PLGTGSGGLSPEAAGAGQNDTVH*GAAELS
Trigger: GCTAAGCTCTGCAGCTCCCCAGTGGACAGTGTCATT...CTGACCGGCACCTGCTGCTTCGGGGCTTAGGCCACCGCTCCCTGTCCCCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp CCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCAATTTTCTGATCATCTaGGCTCTTGCTGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: PADSGGRRTGRAVCWALPNFLII*ALAAIQ
Trigger: CTGGATGGCAGCAAGAGCTCAGATGATCAGAAAATT...GGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp ACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCTGAGGAGGAGTCCAGAGGTAGCTaGCTATTCCCTTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: TREVGGLAGQCAGPCPEEESRGS*LFPCHL
Trigger: CAGATGACAAGGGAATAGTCAGCTACCTCTGGACTC...CTCCTCAGGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACAAGGAGGCCCTGAGGTaGGGATATCTGGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHKEALR*GYLGAH
Trigger: GTGGGCCCCCAGATATCCTCACCTCAGGGCCTCCTT...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGAAGGAGGCCCTGAGGTaGGGATATCTGGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: QQASPCSTLGTMTLSTGEKEALR*GYLGAH
Trigger: GTGGGCCCCCAGATATCCTCACCTCAGGGCCTCCTT...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTTCTCAGCATCTGTGGTaGGGGGAGGGGTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTSQHLW*GEGCHF
Trigger: GAAGTGGCACCCCTCCCCTCACCACAGATGCTGAGA...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGTGGTCTTGATCTCCTaGCCTCATGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RGATSSLPSERAYSTPERVVLIS*PHDPPA
Trigger: GGCGGGCGGATCATGAGGTCAGGAGATCAAGACCAC...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp ACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCTGAGGAGATCTGGGCCTGCATCTaGCTGAGGAGGCTTATTGTT +
Preference number: 4 (lower is better)
Translates to: TREVGGLAGQCAGPCPEEIWACI*LRRLIV
Trigger: AACAATAAGCCTCCTCAGGCAGATGCAGGCCCAGAT...CTCCTCAGGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACCAGTGTGCTGGGCCCTaGCCTGAGGAGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHQCAGP*PEETDQ
Trigger: CTGGTCTGTCTCCTCAGGGCAGGGCCCAGCACACTG...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp CCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCCGGCCATCATTTCTATaGTACCATCTCAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: PADSGGRRTGRAVCWALPRPSFL*YHLSIC
Trigger: ACAGATGCTGAGATGGTAGCATAGAAATGATGGCCG...GGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp AGAGGCCACCCGCCATCCCTGACACAGTCAATCCTCCCTAATCTCGGGCCGGATTCTGTCCAGCCTGGCTaGTCTGACAAGGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RGHPPSLTQSILPNLGPDSVQPG*SDKGPG
Trigger: GCCAGGGCCCTTGTCAGAGCAGCCAGGCTGGACAGA...ATCCGGCCCGAGATTAGGGAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGCCTCCCGCGGGCTCCTaGCCTTCAGAGGGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRPPAGS*PSEGSA
Trigger: GGCAGACCCCTCTGAAGGCCAGGAGCCCGCGGGAGG...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACCAGGTGCCGGTCAGATaGAGAGGAGGGAGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHQVPVR*RGGRPS
Trigger: AGACGGCCTCCCTCCTCTCCATCTGACCGGCACCTG...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp GGGCCGATTCTTACGGGGCTCTGGCTTGACTGTCACGTTCACATAGCCTTCCCCGGAGCTGCAGCAGCCTaGAGCCAGGAGTGGGCAACG +
Preference number: 4 (lower is better)
Translates to: GPILTGLWLDCHVHIAFPGAAAA*SQEWAT
Trigger: CGTTGCCCACTCCTGGCTCCAGGCTGCTGCAGCTCC...GGGGAAGGCTATGTGAACGTGACAGTCAAGCCAGAGCCCCGTAAGAATCGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCGCAGGCAGCCCAACATaGCTGGAGAGAGGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCAGSPT*LERGGS
Trigger: GGAACCCCCTCTCTCCAGTCATGTTGGGCTGCCTGC...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp CCTCTGGGGACAGGGAGCGGTGGCCTAAGCCCCGAAGCAGCAGGTGCCGGTCAGGAATCTTTTGCACAATaGTGTCGGAATCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: PLGTGSGGLSPEAAGAGQESFAQ*CRNPAP
Trigger: GGGTGCTGGATTCCGACATCATTGTGCAAAAGATTC...CTGACCGGCACCTGCTGCTTCGGGGCTTAGGCCACCGCTCCCTGTCCCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp ACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCTGAGGAGTGCTCCGTGTACGGCTaGATCTTTTGCACAATGATG +
Preference number: 4 (lower is better)
Translates to: TREVGGLAGQCAGPCPEECSVYG*IFCTMM
Trigger: CATCATTGTGCAAAAGATTCAGCCGTACACGGAGCA...CTCCTCAGGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp ACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCTGAGGAGTGGAGTCAGATATCATaGGGCACCTTGCTAAGGGTT +
Preference number: 4 (lower is better)
Translates to: TREVGGLAGQCAGPCPEEWSQIS*GTLLRV
Trigger: AACCCTTAGCAAGGTGCCTCATGATATCTGACTCCA...CTCCTCAGGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373266.8
CDS-3UTR GCA 90 bp GGGCCGATTCTTACGGGGCTCTGGCTTGACTGTCACGTTCACATAGCCTTCCCCGGCAGCTCTGGGGCCTaGTGCAGTCTGCCTGAATGC +
Preference number: 4 (lower is better)
Translates to: GPILTGLWLDCHVHIAFPGSSGA*CSLPEC
Trigger: GCATTCAGGCAGACTGCAGCAGGCCCCAGAGCTGCC...GGGGAAGGCTATGTGAACGTGACAGTCAAGCCAGAGCCCCGTAAGAATCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR GCA 90 bp CCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCGAATATCAAAAAGTCTaGCTTTTGCTTCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PADSGGRRTGRAVCWALPEYQKV*LLLPQL
Trigger: GAGCTGCGGAAGCAAAAGGCAGACTTTTTGATATTC...GGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTATTCTTACGGGGCTCTaGCTTGACTGTCACGTTCAC +
Preference number: 4 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCILTGL*LDCHVH
Trigger: GTGAACGTGACAGTCAAGCCAGAGCCCCGTAAGAAT...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp CCTCTGGGGACAGGGAGCGGTGGCCTAAGCCCCGAAGCAGCAGGTGCCGGTCAGCCAGGTTGTTTTTCCTaGGATCAGGTTTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PLGTGSGGLSPEAAGAGQPGCFS*DQVSPP
Trigger: TGGAGGTGAAACCTGATCCCAGGAAAAACAACCTGG...CTGACCGGCACCTGCTGCTTCGGGGCTTAGGCCACCGCTCCCTGTCCCCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACGCCTGCTCGGGAGGTTaGCTTCAGCTCCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHACSGG*LQLQAF
Trigger: GAAAGCCTGGAGCTGAAGCCAACCTCCCGAGCAGGC...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACGCCCTTCTCTCGGTCTaGCCATGTAAAGATGGCATC +
Preference number: 4 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHALLSV*PCKDGI
Trigger: GATGCCATCTTTACATGGCCAGACCGAGAGAAGGGC...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGATGACCAGCAGATGCTaGGACAGCAGCTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: QQASPCSTLGTMTLSTGEMTSRC*DSSCPQ
Trigger: CTGCGGGCAGCTGCTGTCCCAGCATCTGCTGGTCAT...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCCCAGGGGTTCTGGTTaGGACTGTCAGGGCGAAATG +
Preference number: 4 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTPRGSG*DCQGEM
Trigger: CATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGG...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp CCTCTGGGGACAGGGAGCGGTGGCCTAAGCCCCGAAGCAGCAGGTGCCGGTCAGGAACTTTTTACTTGTTaGGTGCTGGGCGTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: PLGTGSGGLSPEAAGAGQELFTC*VLGVVA
Trigger: TGCTACTACGCCCAGCACTCAACAAGTAAAAAGTTC...CTGACCGGCACCTGCTGCTTCGGGGCTTAGGCCACCGCTCCCTGTCCCCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTAGCCTCTCAGTTAGCTaGCTGACGTTGATATCCAAG +
Preference number: 4 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCSLSVS*LTLISK
Trigger: CTTGGATATCAACGTCAGTCAGCTAACTGAGAGGCT...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGCCACCTCATGGCCTTTaGAGATCTGGTGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QQASPCSTLGTMTLSTGEPPHGL*RSGGEA
Trigger: AGCCTCCCCACCAGATCTTCAAAGGCCATGAGGTGG...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp CAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATGCTGGGACAGTCTCAGCATCTGTGGTaGGGGGAGGGGTGCCACTTC +
Preference number: 4 (lower is better)
Translates to: QGFWLGLSGRNDQQMLGQSQHLW*GEGCHF
Trigger: GAAGTGGCACCCCTCCCCTCACCACAGATGCTGAGA...CTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACGTCAAATTTGCCTTGTaGGCAGCCAAGAGCCCAATG +
Preference number: 4 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHVKFAL*AAKSPM
Trigger: CATTGGGCTCTTGGCTGCTCACAAGGCAAATTTGAC...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp ACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCTGAGGAGACCCAGTTCAGCATGTaGGTGAATATGGAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: TREVGGLAGQCAGPCPEETQFSM*VNMESD
Trigger: ATCTGACTCCATATTCACTCACATGCTGAACTGGGT...CTCCTCAGGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373266.8
CDS-3UTR GCA 90 bp ACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCTGAGGAGAAAAAGTCTGCCTTTTaGTTCCGCAGCTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: TREVGGLAGQCAGPCPEEKKSAF*FRSSLL
Trigger: CAAGAGTGAGCTGCGGAAGCAAAAGGCAGACTTTTT...CTCCTCAGGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGGACCATGCAGGAGTTTaGCCTTCTCTCGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QQASPCSTLGTMTLSTGEDHAGV*PSLGLA
Trigger: GGCCAGACCGAGAGAAGGGCAAACTCCTGCATGGTC...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGCACAGTGCTTGGTTTTaGACTCAGGTGTGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGATSSLPSERAYSTPERHSAWF*TQVCGQ
Trigger: CTGCCCGCACACCTGAGTGCAAAACCAAGCACTGTG...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTACACATGCGCTCTCATaGCACAACATTCCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCTHALS*HNIPVH
Trigger: ATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGT...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp ATAACTGTAGGAGGGAGCCACTGGCTGGGGGACAGCAATCTGGGTTTTCTCAGACCTCCTCCTGGTCCATaGGCTCGGGGACCCCCAACC +
Preference number: 4 (lower is better)
Translates to: ITVGGSHWLGDSNLGFLRPPPGP*ARGPPT
Trigger: GGTTGGGGGTCCCCGAGCCCATGGACCAGGAGGAGG...TCTGAGAAAACCCAGATTGCTGTCCCCCAGCCAGTGGCTCCCTCCTACAGTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR CCA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTACATTCACAGAGCTCTaGCTTTGCAGGTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCTFTEL*LCRFLS
Trigger: TGAGAGGAACCTGCAAAGCCAGAGCTCTGTGAATGT...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTAGGAGGACCCCAATCTaGCGGATGAACATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTRRTPI*RMNIPF
Trigger: GAAGGGGATGTTCATCCGCCAGATTGGGGTCCTCCT...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp AAGGGCCCTGGCAGCGAGAGAGGCCACCCGCCATCCCTGACACAGTCAATCCTCGTGAACGAGTCACAGTaGCCATGGTCGGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: KGPGSERGHPPSLTQSILVNESQ*PWSEQF
Trigger: GAACTGTTCCGACCATGGCCACTGTGACTCGTTCAC...GAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCTCTCGCTGCCAGGGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGAGGAGACAGACCAGGTaGCTACAGGATCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: QQASPCSTLGTMTLSTGERRQTR*LQDLLP
Trigger: CGGGAGGAGATCCTGTAGCCACCTGGTCTGTCTCCT...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp GCACACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCGCAGAGCTTAGCAGCTaGCTGGGTCTGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AHMRSHATTFQSIWGYLLAELSS*LGLPSG
Trigger: CCCCGAGGGCAGACCCAGCCAGCTGCTAAGCTCTGC...GAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp GCACACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGGCTATCTCCTCTaGGGACAGGGAGCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AHMRSHATTFQSIWGYLLWGYLL*GQGAVA
Trigger: GGCCACCGCTCCCTGTCCCCAGAGGAGATAGCCCCA...GAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp GGACCACAGCGGGGCCATCGCACACATGCGCTCTCATGCCACAACATTCCAGTCTACGGGGCTCTGGCTTaGCTGTCACGTTCACATAGC +
Preference number: 4 (lower is better)
Translates to: GPQRGHRTHALSCHNIPVYGALA*LSRSHS
Trigger: GCTATGTGAACGTGACAGTCAAGCCAGAGCCCCGTA...GACTGGAATGTTGTGGCATGAGAGCGCATGTGTGCGATGGCCCCGCTGTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACGAGATCTCCTGGAACTaGGGTGACACAATAGCAATG +
Preference number: 4 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHEISWN*GDTIAM
Trigger: CATTGCTATTGTGTCACCTCAGTTCCAGGAGATCTC...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGGCTGCTTGGGCTGAGTaGCCACTCATAGCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: QQASPCSTLGTMTLSTGEAAWAE*PLIAGD
Trigger: ATCACCAGCTATGAGTGGTCACTCAGCCCAAGCAGC...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp GGACCACAGCGGGGCCATCGCACACATGCGCTCTCATGCCACAACATTCCAGTCCTTTGCTGCTTGGGCTaGGTGACCACTCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPQRGHRTHALSCHNIPVLCCLG*VTTHSW
Trigger: CCAGCTATGAGTGGTCACTCAGCCCAAGCAGCAAAG...GACTGGAATGTTGTGGCATGAGAGCGCATGTGTGCGATGGCCCCGCTGTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp AAGGGCCCTGGCAGCGAGAGAGGCCACCCGCCATCCCTGACACAGTCAATCCTCACAATAACAGTCACTTaGGCAGTGGCCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KGPGSERGHPPSLTQSILTITVT*AVACCP
Trigger: AGGACAGCAGGCCACTGCTCAAGTGACTGTTATTGT...GAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCTCTCGCTGCCAGGGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCAGCTCCAGGCTTTCCTaGTCCGTGGCATCCAGGATC +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCSSRLS*SVASRI
Trigger: GATCCTGGATGCCACGGATCAGGAAAGCCTGGAGCT...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCATCGCTGTCCAGCTCTaGCTCGGAGTGCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCIAVQL*LGVHQA
Trigger: AGCCTGATGCACTCCGAGTCAGAGCTGGACAGCGAT...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp GGGCCGATTCTTACGGGGCTCTGGCTTGACTGTCACGTTCACATAGCCTTCCCCAGCTCTGGGGCCTGCTaGAGTCTGCCTGAATGCACA +
Preference number: 4 (lower is better)
Translates to: GPILTGLWLDCHVHIAFPSSGAC*SLPECT
Trigger: TGTGCATTCAGGCAGACTGCAGCAGGCCCCAGAGCT...GGGGAAGGCTATGTGAACGTGACAGTCAAGCCAGAGCCCCGTAAGAATCGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR GCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGTTAGCATTCTCGAGCTaGACCCCATCAGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RGATSSLPSERAYSTPERLAFSS*TPSGPC
Trigger: ACAGGGACCTGATGGGGTGCAGCTCGAGAATGCTAA...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTAAAATACCATTTTGGTaGTCTGCTCCGTGTACGGCT +
Preference number: 4 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCKIPFW*SAPCTA
Trigger: AGCCGTACACGGAGCAGAGCACCAAAATGGTATTTT...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp CCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCTTGGGTTTTCCTTTTTaGCTCTTACAACAACAGATC +
Preference number: 4 (lower is better)
Translates to: PADSGGRRTGRAVCWALPLGFPF*LLQQQI
Trigger: GATCTGTTGTTGTAAGAGGCAAAAAGGAAAACCCAA...GGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp CAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATGCTGGGACAGGACCATGCAGGAGTTTaGCCTTCTCTCGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QGFWLGLSGRNDQQMLGQDHAGV*PSLGLA
Trigger: GGCCAGACCGAGAGAAGGGCAAACTCCTGCATGGTC...CTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCCAGCAGGCCTCACCTTaGAGCACTCTGGGCACAATG +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCQQASP*STLGTM
Trigger: CATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCTTTTGCACTCAGGTGTaGGGGCAGCACAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCFCTQV*GQHSRP
Trigger: AGGCCTGCTGTGCTGCCCGCACACCTGAGTGCAAAA...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp GCACACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCCCCCGAAGCAGCAGGTaGCGGTCAGATGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: AHMRSHATTFQSIWGYLLPRSSR*RSDGEE
Trigger: CTCCTCTCCATCTGACCGGCACCTGCTGCTTCGGGG...GAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCCAGGAAGCAGGATTTaGCTTGACTCCCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTPGSRI*LDSQPL
Trigger: AAGAGGCTGGGAGTCAAGCCAAATCCTGCTTCCTGG...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGGCACCTGCTCTCACTaGCATCTGTTGACAACCACA +
Preference number: 4 (lower is better)
Translates to: RGATSSLPSERAYSTPERGTCSH*HLLTTT
Trigger: TGTGGTTGTCAACAGATGCCAGTGAGAGCAGGTGCC...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCTGTGTCTTCCCCTGCTaGCACCTGCTCTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCCVFPC*HLLSLA
Trigger: TGCCAGTGAGAGCAGGTGCCAGCAGGGGAAGACACA...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACAGCCACCAAAAGACATaGCAGGCAGAGTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHSHQKT*QAESWQ
Trigger: CTGCCAGGACTCTGCCTGCCATGTCTTTTGGTGGCT...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGGGTCAGCTCTTTATCTaGGCCTGCATCTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QQASPCSTLGTMTLSTGEGQLFI*ACICLR
Trigger: CCTCAGGCAGATGCAGGCCCAGATAAAGAGCTGACC...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTATCGCTGCCACCTCATaGCCTTTGAAGATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTIAATS*PLKIWW
Trigger: CCACCAGATCTTCAAAGGCCATGAGGTGGCAGCGAT...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGATCGCTGCCACCTCATaGCCTTTGAAGATCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RGATSSLPSERAYSTPERIAATS*PLKIWW
Trigger: CCACCAGATCTTCAAAGGCCATGAGGTGGCAGCGAT...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp CAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATGCTGGGACAGCCCAGGGGTTCTGGTTaGGACTGTCAGGGCGAAATG +
Preference number: 4 (lower is better)
Translates to: QGFWLGLSGRNDQQMLGQPRGSG*DCQGEM
Trigger: CATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGG...CTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCAAGTCCCAGGGGTTCTaGTTGGGACTGTCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCKSQGF*LGLSGR
Trigger: TCGCCCTGACAGTCCCAACCAGAACCCCTGGGACTT...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp ACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCTGAGGAGACAACCACAGAACGCTaGAGCAAAAGCAAGTATAAA +
Preference number: 4 (lower is better)
Translates to: TREVGGLAGQCAGPCPEETTTER*SKSKYK
Trigger: TTTATACTTGCTTTTGCTTCAGCGTTCTGTGGTTGT...CTCCTCAGGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGCTCACTGGCATCTGTTaGCAACCACAGAACGCTGAA +
Preference number: 4 (lower is better)
Translates to: RGATSSLPSERAYSTPERLTGIC*QPQNAE
Trigger: TTCAGCGTTCTGTGGTTGTCAACAGATGCCAGTGAG...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTAGATACAGCGTTTGGTaGACGAGTCACAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTRYSVW*TSHSGH
Trigger: ATGGCCACTGTGACTCGTTCACCAAACGCTGTATCT...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp CGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGGACAGAGCTCCAGGCTTTCCTaGTCCGTGGCATCCAGGATC +
Preference number: 4 (lower is better)
Translates to: RSHATTFQSIWGYLLWGQSSRLS*SVASRI
Trigger: GATCCTGGATGCCACGGATCAGGAAAGCCTGGAGCT...CTGTCCCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCGGTACAGAGCCATTCTaGCCATGCAGGAGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCGTEPF*PCRSLP
Trigger: GGGCAAACTCCTGCATGGTCAGAATGGCTCTGTACC...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp CAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATGCTGGGACAGGGTACAGAGCCATTCTaGCCATGCAGGAGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: QGFWLGLSGRNDQQMLGQGTEPF*PCRSLP
Trigger: GGGCAAACTCCTGCATGGTCAGAATGGCTCTGTACC...CTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGAAGAGCCCAATGAGTTaGTGCATACGCGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: RGATSSLPSERAYSTPERKSPMS*CIRAHS
Trigger: AGAGTGAGCGCGTATGCATCAACTCATTGGGCTCTT...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp ACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCTGAGGAGAGTTCAGCATGTGAGTaGATATGGAGTCAGATATCA +
Preference number: 4 (lower is better)
Translates to: TREVGGLAGQCAGPCPEESSACE*IWSQIS
Trigger: TGATATCTGACTCCATATTCACTCACATGCTGAACT...CTCCTCAGGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373266.8
CDS-3UTR GCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGCATCTGAGCTCTTGCTaGCATCCAGGGTTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: RGATSSLPSERAYSTPERHLSSC*HPGLCY
Trigger: ATAGCACAACCCTGGATGGCAGCAAGAGCTCAGATG...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGACTCTTGAGCATCGCTaGCACCTCATGGCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: RGATSSLPSERAYSTPERTLEHR*HLMAFE
Trigger: TTCAAAGGCCATGAGGTGGCAGCGATGCTCAAGAGT...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCGGAGTGCATCAGGCTaGTACTTAGCAAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTRSASG*YLAKGL
Trigger: AAGGCCTTTTGCTAAGTAGCAGCCTGATGCACTCCG...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGGCCTTCAGAGGGGTCTaGCCGTTGGGTACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRAFRGV*PLGTEP
Trigger: TGGCTCTGTACCCAACGGGCAGACCCCTCTGAAGGC...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp TCCACTGTAGTCTCTAGGATGAGTAATCAGCTGCCAGTCGTAGGTGTAGGTTTCGCCTCCGCCTCCTCCTaGTCCATGGGCTCGGGGACC +
Preference number: 4 (lower is better)
Translates to: STVVSRMSNQLPVVGVGFASASS*SMGSGT
Trigger: GGTCCCCGAGCCCATGGACCAGGAGGAGGCGGAGGC...GAAACCTACACCTACGACTGGCAGCTGATTACTCATCCTAGAGACTACAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR CCA 90 bp GGGCCGATTCTTACGGGGCTCTGGCTTGACTGTCACGTTCACATAGCCTTCCCCAGCCACCAAAAGACATaGCAGGCAGAGTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GPILTGLWLDCHVHIAFPSHQKT*QAESWQ
Trigger: CTGCCAGGACTCTGCCTGCCATGTCTTTTGGTGGCT...GGGGAAGGCTATGTGAACGTGACAGTCAAGCCAGAGCCCCGTAAGAATCGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp CATAACTGTAGGAGGGAGCCACTGGCTGGGGGACAGCAATCTGGGTTTTCTCAGGTAGGAGGGAGCCACTaGCTGGGGGACAGCAATCTG +
Preference number: 4 (lower is better)
Translates to: HNCRREPLAGGQQSGFSQVGGSH*LGDSNL
Trigger: CAGATTGCTGTCCCCCAGCCAGTGGCTCCCTCCTAC...CTGAGAAAACCCAGATTGCTGTCCCCCAGCCAGTGGCTCCCTCCTACAGTTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR CCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGCAGTCACTTGAGCAGTaGCCTGCTGTCCTATTGTGT +
Preference number: 4 (lower is better)
Translates to: RGATSSLPSERAYSTPERQSLEQ*PAVLLC
Trigger: ACACAATAGGACAGCAGGCCACTGCTCAAGTGACTG...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACGTGAACGAGTCACAGTaGCCATGGTCGGAACAGTTC +
Preference number: 4 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHVNESQ*PWSEQF
Trigger: GAACTGTTCCGACCATGGCCACTGTGACTCGTTCAC...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp GGACCACAGCGGGGCCATCGCACACATGCGCTCTCATGCCACAACATTCCAGTCGCCCTTCTCTCGGTCTaGCCATGTAAAGATGGCATC +
Preference number: 4 (lower is better)
Translates to: GPQRGHRTHALSCHNIPVALLSV*PCKDGI
Trigger: GATGCCATCTTTACATGGCCAGACCGAGAGAAGGGC...GACTGGAATGTTGTGGCATGAGAGCGCATGTGTGCGATGGCCCCGCTGTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGTCGTTGAGGGGTTCCTaGAGGACGTCTCTGGATTCA +
Preference number: 4 (lower is better)
Translates to: QQASPCSTLGTMTLSTGESLRGS*RTSLDS
Trigger: TGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGA...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACAATGACACTGTCCACTaGGGAGCTGCAGAGCTTAGC +
Preference number: 4 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHNDTVH*GAAELS
Trigger: GCTAAGCTCTGCAGCTCCCCAGTGGACAGTGTCATT...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACCATGCCCACAGTGCTTaGTTTTGCACTCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHHAHSA*FCTQVC
Trigger: GCACACCTGAGTGCAAAACCAAGCACTGTGGGCATG...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGACATTCCAGTCCATCTaGGGCTATCTCCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QQASPCSTLGTMTLSTGETFQSI*GYLLWG
Trigger: TCCCCAGAGGAGATAGCCCCAGATGGACTGGAATGT...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACTCATCATCAGTGCTTTaGCTGCCATCAATGACTGTA +
Preference number: 4 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHSSSVL*LPSMTV
Trigger: TACAGTCATTGATGGCAGTCAAAGCACTGATGATGA...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp CAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATGCTGGGACAGGGGCCTGCATCTGCCTaGGGAGGCTTATTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: QGFWLGLSGRNDQQMLGQGPASA*GGLLFS
Trigger: TGAAAACAATAAGCCTCCTCAGGCAGATGCAGGCCC...CTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGCCCCAATCTGGCGGATaGACATCCCCTTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRPQSGG*TSPSAS
Trigger: AGAGGCTGAAGGGGATGTTCATCCGCCAGATTGGGG...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGTGCTCCGTGTACGGCTaGATCTTTTGCACAATGATG +
Preference number: 4 (lower is better)
Translates to: RGATSSLPSERAYSTPERCSVYG*IFCTMM
Trigger: CATCATTGTGCAAAAGATTCAGCCGTACACGGAGCA...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp GCACACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCATCGCTGTCCAGCTCTaGCTCGGAGTGCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: AHMRSHATTFQSIWGYLLIAVQL*LGVHQA
Trigger: AGCCTGATGCACTCCGAGTCAGAGCTGGACAGCGAT...GAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp CCTGAGGTGAGGATATCTGGGGGCCCACCAGACAGGTTTAAAGAGGAAACCTCTGCCACCCGCCATCCCTaGCACAGTCAATCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: PEVRISGGPPDRFKEETSATRHP*HSQSSL
Trigger: TAGGGAGGATTGACTGTGTCAGGGATGGCGGGTGGC...AGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCCCCCAGATATCCTCACCTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp TATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATGTGGGCAACGCGGCGTaGGCAGCGGCCCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: YHHQWTAINDCRSGWQRDVGNAA*AAARGS
Trigger: GGAGCCTCGGGCCGCTGCTCACGCCGCGTTGCCCAC...ATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR GCA 90 bp ACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGTACAGCAGGTCTGAGTaGAGCTCTGGGTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TCALMPQHSSPSGAISSGYSRSE*SSGWAL
Trigger: CAGAGCCCACCCAGAGCTGCACTCAGACCTGCTGTA...CCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp GATTCAAGTCCCAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGACGCCTTGTGGACCTCTaGAGAGCCACTGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: DSSPRGSGWDCQGEMTSRRLVDL*RATGSQ
Trigger: CTGACTACCAGTGGCTCTGCAGAGGTCCACAAGGCG...TCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGGACTTGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp AGAGGCCACCCGCCATCCCTGACACAGTCAATCCTCCCTAATCTCGGGCCGGATTGCCATGATCATCAGTaGTCTGGTTCCCAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RGHPPSLTQSILPNLGPDCHDHQ*SGSQRG
Trigger: CCCTCTTTGGGAACCAGAGCACTGATGATCATGGCA...ATCCGGCCCGAGATTAGGGAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACATCTGGGCCTGCATCTaGCTGAGGAGGCTTATTGTT +
Preference number: 4 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHIWACI*LRRLIV
Trigger: AACAATAAGCCTCCTCAGGCAGATGCAGGCCCAGAT...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCCTCTTTATCTGGGCCTaGATCTGCCTGAGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCLFIWA*ICLRRL
Trigger: AAGCCTCCTCAGGCAGATGCAGGCCCAGATAAAGAG...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTACAGAGCTCTGGCTTTaGAGGTTCCTCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTTELWL*RFLSSL
Trigger: CAAAGATGAGAGGAACCTGCAAAGCCAGAGCTCTGT...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp GATTCAAGTCCCAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGACAGCAGGCCTCACCTTaGAGCACTCTGGGCACAATG +
Preference number: 4 (lower is better)
Translates to: DSSPRGSGWDCQGEMTSRQQASP*STLGTM
Trigger: CATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG...TCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGGACTTGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp GCACACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTTTTGCACTCAGGTGTaGGGGCAGCACAGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AHMRSHATTFQSIWGYLLFCTQV*GQHSRP
Trigger: AGGCCTGCTGTGCTGCCCGCACACCTGAGTGCAAAA...GAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGACACCATGCCCACAGTaGTTGGTTTTGCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: QQASPCSTLGTMTLSTGETPCPQ*LVLHSG
Trigger: ACCTGAGTGCAAAACCAAGCACTGTGGGCATGGTGT...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp CGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGGACAGGGGCCATCGCACACATaGGCTCTCATGCCACAACAT +
Preference number: 4 (lower is better)
Translates to: RSHATTFQSIWGYLLWGQGPSHT*ALMPQH
Trigger: ATGTTGTGGCATGAGAGCGCATGTGTGCGATGGCCC...CTGTCCCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGAAGTCCCAGGGGTTCTaGTTGGGACTGTCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRKSQGF*LGLSGR
Trigger: TCGCCCTGACAGTCCCAACCAGAACCCCTGGGACTT...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCCATGCCCACAGTGCTTaGTTTTGCACTCAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCHAHSA*FCTQVC
Trigger: GCACACCTGAGTGCAAAACCAAGCACTGTGGGCATG...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCGGGGACAGGGAGCGGTaGCCTAAGCCCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PDRFKEETSSFTASLRGSGDRER*PKPRSS
Trigger: GCTGCTTCGGGGCTTAGGCCACCGCTCCCTGTCCCC...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp ACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTCCTGGAACTGAGGGCCTGGAGCCAGGAGTaGGCAACGCGGCGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: TAINDCRSGWQRDLLELRAWSQE*ATRREQ
Trigger: CTGCTCACGCCGCGTTGCCCACTCCTGGCTCCAGGC...CCTCAGTTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp ACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGCTGCTGCAGTCTGCCTaGATGCACATCCCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: TCALMPQHSSPSGAISSGLLQSA*MHIPSS
Trigger: GCTAGAAGGGATGTGCATTCAGGCAGACTGCAGCAG...CCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCACAATAACAGTCACTTaGGCAGTGGCCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCTITVT*AVACCP
Trigger: AGGACAGCAGGCCACTGCTCAAGTGACTGTTATTGT...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTATTCCCTTGTCATCTaGGGACTTAGAGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHYSLVI*GLRAIQ
Trigger: CTGGATGGCTCTAAGTCCTCAGATGACAAGGGAATA...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp AGAGGCCACCCGCCATCCCTGACACAGTCAATCCTCCCTAATCTCGGGCCGGATAGCCTCTCAGTTAGCTaGCTGACGTTGATATCCAAG +
Preference number: 4 (lower is better)
Translates to: RGHPPSLTQSILPNLGPDSLSVS*LTLISK
Trigger: CTTGGATATCAACGTCAGTCAGCTAACTGAGAGGCT...ATCCGGCCCGAGATTAGGGAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp ACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGCAGCCAAGAGCCCAATaGGTTGATGCATACGCGCTC +
Preference number: 4 (lower is better)
Translates to: TCALMPQHSSPSGAISSGQPRAQ*VDAYAL
Trigger: GAGCGCGTATGCATCAACTCATTGGGCTCTTGGCTG...CCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp CCTGAGGTGAGGATATCTGGGGGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCCCCTGCTGGCACCTaGTCTCACTGGCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: PEVRISGGPPDRFKEETSSPAGT*SHWHLL
Trigger: CAACAGATGCCAGTGAGAGCAGGTGCCAGCAGGGGA...AGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCCCCCAGATATCCTCACCTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGCAGCTCTGGGGCCTaGTGCAGTCTGCCTGAATGC +
Preference number: 4 (lower is better)
Translates to: GPPDRFKEETSSFTASLRGSSGA*CSLPEC
Trigger: GCATTCAGGCAGACTGCAGCAGGCCCCAGAGCTGCC...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp ACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGCACAGTGCTTGGTTTTaGACTCAGGTGTGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: TCALMPQHSSPSGAISSGHSAWF*TQVCGQ
Trigger: CTGCCCGCACACCTGAGTGCAAAACCAAGCACTGTG...CCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp CAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATGCTGGGACAGATTGTAATCGCCTTGTaGACCTCTGCAGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: QGFWLGLSGRNDQQMLGQIVIAL*TSAEPL
Trigger: CAGTGGCTCTGCAGAGGTCCACAAGGCGATTACAAT...CTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp ACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGAGGAGGACCCCAATCTaGCGGATGAACATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: TCALMPQHSSPSGAISSGRRTPI*RMNIPF
Trigger: GAAGGGGATGTTCATCCGCCAGATTGGGGTCCTCCT...CCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCGGCTTTCCTGATCCGTaGCATCCAGGATCTTGTACT +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCGFPDP*HPGSCT
Trigger: AGTACAAGATCCTGGATGCCACGGATCAGGAAAGCC...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp ACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTCCTGGAACTGAGGCCCGGAGCATCGCGCTaGGAGAAGACTTCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: TAINDCRSGWQRDLLELRPGASR*EKTSPL
Trigger: GAGCGGCGAAGTCTTCTCCCAGCGCGATGCTCCGGG...CCTCAGTTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp ACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTCCTGGAACTGAGGGCAGGCAGCCCAACATaGCTGGAGAGAGGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: TAINDCRSGWQRDLLELRAGSPT*LERGGS
Trigger: GGAACCCCCTCTCTCCAGTCATGTTGGGCTGCCTGC...CCTCAGTTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTATTTCAGGTTGCACTaGTACATTCTTTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHYFRLH*YILWPT
Trigger: GGTGGGCCAAAGAATGTATCAGTGCAACCTGAAATA...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp CAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATGCTGGGACAGGAATCTTTTGCACAATaGTGTCGGAATCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: QGFWLGLSGRNDQQMLGQESFAQ*CRNPAP
Trigger: GGGTGCTGGATTCCGACATCATTGTGCAAAAGATTC...CTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp CCTGAGGTGAGGATATCTGGGGGCCCACCAGACAGGTTTAAAGAGGAAACCTCTACTGTCAGGGCGAAATaGCCAGCAGATGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: PEVRISGGPPDRFKEETSTVRAK*PADAGT
Trigger: TGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGT...AGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCCCCCAGATATCCTCACCTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp GCACACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCAATTGTGTCTTCCCCTaGTGGCACCTGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: AHMRSHATTFQSIWGYLLNCVFP*WHLLSL
Trigger: CAGTGAGAGCAGGTGCCAGCAGGGGAAGACACAATT...GAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp ACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGTGCAGTCTGCCTGAATaGACATCCCTTCTAGCCACC +
Preference number: 4 (lower is better)
Translates to: TCALMPQHSSPSGAISSGCSLPE*TSLLAT
Trigger: GGTGGCTAGAAGGGATGTGCATTCAGGCAGACTGCA...CCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp ACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGCTCTTTATCTGGGCCTaGATCTGCCTGAGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TCALMPQHSSPSGAISSGLFIWA*ICLRRL
Trigger: AAGCCTCCTCAGGCAGATGCAGGCCCAGATAAAGAG...CCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGTTAGCATTCTCGAGCTaGACCCCATCAGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRLAFSS*TPSGPC
Trigger: ACAGGGACCTGATGGGGTGCAGCTCGAGAATGCTAA...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp CAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATGCTGGGACAGTCTCCATCCCTCAGCTaGACCTTGATGAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: QGFWLGLSGRNDQQMLGQSPSLS*TLMKFS
Trigger: GGAGAATTTCATCAAGGTGCAGCTGAGGGATGGAGA...CTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTTTTCCAAGTCAAATTTaGCTTGTGAGCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTFPSQI*LVSSQE
Trigger: CTCTTGGCTGCTCACAAGGCAAATTTGACTTGGAAA...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp GATTCAAGTCCCAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGAAGGGTGATGGAGTTTTaGGGCAGGGTGATCACTTGG +
Preference number: 4 (lower is better)
Translates to: DSSPRGSGWDCQGEMTSRRVMEF*GRVITW
Trigger: CCAAGTGATCACCCTGCCCCAAAACTCCATCACCCT...TCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGGACTTGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp CCTGAGGTGAGGATATCTGGGGGCCCACCAGACAGGTTTAAAGAGGAAACCTCTGGTCAGCTCTTTATCTaGGCCTGCATCTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PEVRISGGPPDRFKEETSGQLFI*ACICLR
Trigger: CCTCAGGCAGATGCAGGCCCAGATAAAGAGCTGACC...AGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCCCCCAGATATCCTCACCTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp GCACACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTCAAGAAGCCAGAGGTaGTTTTCTCCCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: AHMRSHATTFQSIWGYLLSRSQR*FSPPDL
Trigger: GAGATCTGGGGGAGAAAATCACCTCTGGCTTCTTGA...GAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp AGGGGTAGCATAACTGTAGGAGGGAGCCACTGGCTGGGGGACAGCAATCTGGGTTATTTCAGGTTGCACTaGTACATTCTTTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: RGSITVGGSHWLGDSNLGYFRLH*YILWPT
Trigger: GGTGGGCCAAAGAATGTATCAGTGCAACCTGAAATA...ACCCAGATTGCTGTCCCCCAGCCAGTGGCTCCCTCCTACAGTTATGCTACCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR TCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCAATTTTCTGATCATCTaGGCTCTTGCTGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCNFLII*ALAAIQ
Trigger: CTGGATGGCAGCAAGAGCTCAGATGATCAGAAAATT...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGGAGTCCAGAGGTAGCTaGCTATTCCCTTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRESRGS*LFPCHL
Trigger: CAGATGACAAGGGAATAGTCAGCTACCTCTGGACTC...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGTCCGCAGCTCACTCTTaGGCATCGCTGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: GPPDRFKEETSSFTASLRSAAHS*ASLPPH
Trigger: ATGAGGTGGCAGCGATGCTCAAGAGTGAGCTGCGGA...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp CGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGGACAGTCGGAACAGTTCAGCTaGCATGTGACAGTGTTGACT +
Preference number: 4 (lower is better)
Translates to: RSHATTFQSIWGYLLWGQSEQFS*HVTVLT
Trigger: AGTCAACACTGTCACATGTCAGCTGAACTGTTCCGA...CTGTCCCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCGCACTCTGGGCACAATaGCACTGTCCACTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PDRFKEETSSFTASLRGSALWAQ*HCPLGS
Trigger: GCTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGC...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCGTGGTCTTGATCTCCTaGCCTCATGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PDRFKEETSSFTASLRGSVVLIS*PHDPPA
Trigger: GGCGGGCGGATCATGAGGTCAGGAGATCAAGACCAC...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGAGCTCTGGGGCCTGCTaGAGTCTGCCTGAATGCACA +
Preference number: 4 (lower is better)
Translates to: GPPDRFKEETSSFTASLRSSGAC*SLPECT
Trigger: TGTGCATTCAGGCAGACTGCAGCAGGCCCCAGAGCT...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp ACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTCCTGGAACTGAGGGCTCTGGGTGGGCTCTaGCTCCAAGATGCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TAINDCRSGWQRDLLELRALGGL*LQDAQF
Trigger: GAACTGGGCATCTTGGAGGCAGAGCCCACCCAGAGC...CCTCAGTTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR GCA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGGTCACTCTCACCCTTTaGATCGGTCACTTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRVTLTL*IGHFQV
Trigger: CACCTGAAAGTGACCGATGCAAAGGGTGAGAGTGAC...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp GATTCAAGTCCCAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGAGTCACTCTCACCCTTTaGATCGGTCACTTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: DSSPRGSGWDCQGEMTSRVTLTL*IGHFQV
Trigger: CACCTGAAAGTGACCGATGCAAAGGGTGAGAGTGAC...TCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGGACTTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp GATTCAAGTCCCAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGAACTCTTGAGCATCGCTaGCACCTCATGGCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: DSSPRGSGWDCQGEMTSRTLEHR*HLMAFE
Trigger: TTCAAAGGCCATGAGGTGGCAGCGATGCTCAAGAGT...TCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGGACTTGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp CAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATGCTGGGACAGAAAAAGTCTGCCTTTTaGTTCCGCAGCTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: QGFWLGLSGRNDQQMLGQKKSAF*FRSSLL
Trigger: CAAGAGTGAGCTGCGGAAGCAAAAGGCAGACTTTTT...CTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGCGGAGTGCATCAGGCTaGTACTTAGCAAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRRSASG*YLAKGL
Trigger: AAGGCCTTTTGCTAAGTAGCAGCCTGATGCACTCCG...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCCGGCCATCATTTCTATaGTACCATCTCAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: SSLPSERAYSTPERETPCRPSFL*YHLSIC
Trigger: ACAGATGCTGAGATGGTAGCATAGAAATGATGGCCG...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTTAAAAACACCAGCATaGAATTGGAGGAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHLKTPA*NWRSVS
Trigger: GGACACACTCCTCCAATTCCATGCTGGTGTTTTTAA...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp ACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGCTGCAGTCAGGTCTGTaGTTAGGGGACTGGAAATTG +
Preference number: 4 (lower is better)
Translates to: TCALMPQHSSPSGAISSGLQSGL*LGDWKL
Trigger: CAATTTCCAGTCCCCTAACCACAGACCTGACTGCAG...CCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGTGGGGGACAGCAATCTaGGTTTTCTCAGAACTTTTT +
Preference number: 4 (lower is better)
Translates to: QQASPCSTLGTMTLSTGEWGTAI*VFSELF
Trigger: AAAAAGTTCTGAGAAAACCCAGATTGCTGTCCCCCA...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp AGAGGCCACCCGCCATCCCTGACACAGTCAATCCTCCCTAATCTCGGGCCGGATGGTTTCTCCTTTAGGTaGTTCTTGGAGAACATATGC +
Preference number: 4 (lower is better)
Translates to: RGHPPSLTQSILPNLGPDGFSFR*FLENIC
Trigger: GCATATGTTCTCCAAGAACCACCTAAAGGAGAAACC...ATCCGGCCCGAGATTAGGGAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp CCTGAGGTGAGGATATCTGGGGGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCGTTGAGGGGTTCCTaGAGGACGTCTCTGGATTCA +
Preference number: 4 (lower is better)
Translates to: PEVRISGGPPDRFKEETSSLRGS*RTSLDS
Trigger: TGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGA...AGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCCCCCAGATATCCTCACCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGCTACTACAGTCAAGCTaGAAGTGTAGTTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRLLQSS*KCSSQG
Trigger: TCCCTGGGAACTACACTTTCAGCTTGACTGTAGTAG...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGTTGTGTCAGTCACTGTaGGCTGGTAAGTGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRLCQSL*AGKCSL
Trigger: GAGACTACACTTACCAGCTCACAGTGACTGACACAA...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp GATTCAAGTCCCAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATATTCCCTTGTCATCTaGGGACTTAGAGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: DSSPRGSGWDCQGEMTSRYSLVI*GLRAIQ
Trigger: CTGGATGGCTCTAAGTCCTCAGATGACAAGGGAATA...TCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGGACTTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCTCCGCAGCTCACTCTTaGGCATCGCTGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: PDRFKEETSSFTASLRGSSAAHS*ASLPPH
Trigger: ATGAGGTGGCAGCGATGCTCAAGAGTGAGCTGCGGA...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp GATTCAAGTCCCAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATCGGAACAGTTCAGCTaGCATGTGACAGTGTTGACT +
Preference number: 4 (lower is better)
Translates to: DSSPRGSGWDCQGEMTSRSEQFS*HVTVLT
Trigger: AGTCAACACTGTCACATGTCAGCTGAACTGTTCCGA...TCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGGACTTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGCATTCACAGCTTCGTTaGGGGGTTCCTGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: GPPDRFKEETSSFTASLRHSQLR*GVPGGR
Trigger: ACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAATG...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp ACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTCCTGGAACTGAGGGGGCCTGCTGCAGTCTaGCTGAATGCACATCCCTTC +
Preference number: 4 (lower is better)
Translates to: TAINDCRSGWQRDLLELRGPAAV*LNAHPF
Trigger: GAAGGGATGTGCATTCAGGCAGACTGCAGCAGGCCC...CCTCAGTTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR GCA 90 bp CGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGGACAGGTTCACTGTCAGGTTTaGAGTAGTAGAGTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: RSHATTFQSIWGYLLWGQVHCQV*SSRVGS
Trigger: GCTACCAACTCTACTACTGCAAACCTGACAGTGAAC...CTGTCCCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp GATTCAAGTCCCAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGAACAGAGCTCTGGCTTTaGAGGTTCCTCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: DSSPRGSGWDCQGEMTSRTELWL*RFLSSL
Trigger: CAAAGATGAGAGGAACCTGCAAAGCCAGAGCTCTGT...TCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGGACTTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGTCTCCATCCCTCAGCTaGACCTTGATGAAATTCTCC +
Preference number: 4 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRSPSLS*TLMKFS
Trigger: GGAGAATTTCATCAAGGTGCAGCTGAGGGATGGAGA...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCGTGCCACTTCCTCTTTaGCCAGCGAGAGGGCGTACT +
Preference number: 4 (lower is better)
Translates to: PDRFKEETSSFTASLRGSVPLPL*PARGRT
Trigger: AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCAC...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp CAGGGTTATCTGGACACTCTCTCCAGCAGATACCACCAGTTCCTTTATAACTGGCCAGCCTCTTCTCCATaGCCCTCCAGACAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: QGYLDTLSSRYHQFLYNWPASSP*PSRQAE
Trigger: TTCTGCCTGTCTGGAGGGCCATGGAGAAGAGGCTGG...CCAGTTATAAAGGAACTGGTGGTATCTGCTGGAGAGAGTGTCCAGATAACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR CCA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGCAGCCCAACATGACTaGAGAGAGGGGGTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GPPDRFKEETSSFTASLRAAQHD*REGVPS
Trigger: TGAAGGAACCCCCTCTCTCCAGTCATGTTGGGCTGC...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp ATGAGTAATCAGCTGCCAGTCGTAGGTGTAGGTTTCTCCTTTAGGTGGTTCTTGGAGGGAGCCACTGGCTaGGGGACAGCAATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: MSNQLPVVGVGFSFRWFLEGATG*GTAIWV
Trigger: AACCCAGATTGCTGTCCCCCAGCCAGTGGCTCCCTC...CAAGAACCACCTAAAGGAGAAACCTACACCTACGACTGGCAGCTGATTACTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR CCA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGACATTCACAGAGCTCTaGCTTTGCAGGTTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRTFTEL*LCRFLS
Trigger: TGAGAGGAACCTGCAAAGCCAGAGCTCTGTGAATGT...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCAGGAGACAGACCAGGTaGCTACAGGATCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: PDRFKEETSSFTASLRGSRRQTR*LQDLLP
Trigger: CGGGAGGAGATCCTGTAGCCACCTGGTCTGTCTCCT...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGAAGCAGGATTTGGCTTaGCTCCCAGCCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GPPDRFKEETSSFTASLRKQDLA*LPASSP
Trigger: TGGAGAAGAGGCTGGGAGTCAAGCCAAATCCTGCTT...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp ACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGCCTCTACAATCACTTTaGATTCATACAGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TCALMPQHSSPSGAISSGPLQSL*IHTGLE
Trigger: CTCCAGGCCTGTATGAATTCAAAGTGATTGTAGAGG...CCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp GCACACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCGACTGTAGAAGTGGTTaGCAAAGAGATCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: AHMRSHATTFQSIWGYLLDCRSG*QRDLLE
Trigger: TTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTC...GAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp GATTCAAGTCCCAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGAGGACTCAGGAAGTCTTaGTTCCAAGGAGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: DSSPRGSGWDCQGEMTSRGLRKS*FQGDES
Trigger: ACTTTCATCTCCTTGGAACCAAGACTTCCTGAGTCC...TCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGGACTTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp AATCAGCTGCCAGTCGTAGGTGTAGGTTTCTCCTTTAGGTGGTTCTTGGAGAACAAGCAGGATTTGGCTTaGCTCCCAGCCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NQLPVVGVGFSFRWFLENKQDLA*LPASSP
Trigger: TGGAGAAGAGGCTGGGAGTCAAGCCAAATCCTGCTT...GTTCTCCAAGAACCACCTAAAGGAGAAACCTACACCTACGACTGGCAGCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR TCA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCAAAGGCCTTTCTGTTTaGTGCCTGCTCGGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PDRFKEETSSFTASLRGSKGLSV*CLLGRL
Trigger: CAACCTCCCGAGCAGGCATCAAACAGAAAGGCCTTT...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp AATCAGCTGCCAGTCGTAGGTGTAGGTTTCTCCTTTAGGTGGTTCTTGGAGAACGCCTTGTGGACCTGTTaGCAACCACAGAACGCTGAA +
Preference number: 4 (lower is better)
Translates to: NQLPVVGVGFSFRWFLENALWTC*QPQNAE
Trigger: TTCAGCGTTCTGTGGTTGTCAACAGGTCCACAAGGC...GTTCTCCAAGAACCACCTAAAGGAGAAACCTACACCTACGACTGGCAGCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR GCA 90 bp CAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATGCTGGGACAGTCTGATATTTCAGGTTaGACTGATACATTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QGFWLGLSGRNDQQMLGQSDISG*TDTFFG
Trigger: GCCAAAGAATGTATCAGTGCAACCTGAAATATCAGA...CTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCAGCTCTGACTCGGAGTaGATCAGGCTGCTACTTAGC +
Preference number: 4 (lower is better)
Translates to: PDRFKEETSSFTASLRGSSSDSE*IRLLLS
Trigger: GCTAAGTAGCAGCCTGATGCACTCCGAGTCAGAGCT...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGACACCATGCCCACAGTaGTTGGTTTTGCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: GPPDRFKEETSSFTASLRTPCPQ*LVLHSG
Trigger: ACCTGAGTGCAAAACCAAGCACTGTGGGCATGGTGT...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp AATCAGCTGCCAGTCGTAGGTGTAGGTTTCTCCTTTAGGTGGTTCTTGGAGAACCCAGGAAGCAGGATTTaGCTTGACTCCCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: NQLPVVGVGFSFRWFLENPGSRI*LDSQPL
Trigger: AAGAGGCTGGGAGTCAAGCCAAATCCTGCTTCCTGG...GTTCTCCAAGAACCACCTAAAGGAGAAACCTACACCTACGACTGGCAGCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR CCA 90 bp ACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTCCTGGAACTGAGGGGCACCTGCTCTCACTaGCATCTGTTGACAACCACA +
Preference number: 4 (lower is better)
Translates to: TAINDCRSGWQRDLLELRGTCSH*HLLTTT
Trigger: TGTGGTTGTCAACAGATGCCAGTGAGAGCAGGTGCC...CCTCAGTTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp GAACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGGAGTGCAGCTCTGGGTaGGCTCTGCCTCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: ERFYHHQWTAINDCRSGWECSSG*ALPPRC
Trigger: GCATCTTGGAGGCAGAGCCCACCCAGAGCTGCACTC...CCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp TATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATGAGGGAGCCACTGGCTaGGGGACAGCAATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: YHHQWTAINDCRSGWQRDEGATG*GTAIWV
Trigger: AACCCAGATTGCTGTCCCCCAGCCAGTGGCTCCCTC...ATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCGTAGGAGGGAGCCACTaGCTGGGGGACAGCAATCTG +
Preference number: 4 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGVGGSH*LGDSNL
Trigger: CAGATTGCTGTCCCCCAGCCAGTGGCTCCCTCCTAC...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp AGCATAACTGTAGGAGGGAGCCACTGGCTGGGGGACAGCAATCTGGGTTTTCTCGGTTTCTCCTTTAGGTaGTTCTTGGAGAACATATGC +
Preference number: 4 (lower is better)
Translates to: SITVGGSHWLGDSNLGFLGFSFR*FLENIC
Trigger: GCATATGTTCTCCAAGAACCACCTAAAGGAGAAACC...GAGAAAACCCAGATTGCTGTCCCCCAGCCAGTGGCTCCCTCCTACAGTTATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR CCA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGCAGTCACTTGAGCAGTaGCCTGCTGTCCTATTGTGT +
Preference number: 4 (lower is better)
Translates to: GPPDRFKEETSSFTASLRQSLEQ*PAVLLC
Trigger: ACACAATAGGACAGCAGGCCACTGCTCAAGTGACTG...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCGTTTCACCTCCACAGTaGTCCGGTCTGTGTCACTCT +
Preference number: 4 (lower is better)
Translates to: PDRFKEETSSFTASLRGSVSPPQ*SGLCHS
Trigger: AGAGTGACACAGACCGGACCACTGTGGAGGTGAAAC...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGCTTTCCTGATCCGTaGCATCCAGGATCTTGTACT +
Preference number: 4 (lower is better)
Translates to: GPPDRFKEETSSFTASLRGFPDP*HPGSCT
Trigger: AGTACAAGATCCTGGATGCCACGGATCAGGAAAGCC...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp CGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGGACAGTCTTCCCAATGGTACTaGACGATTTTATCATCATCA +
Preference number: 4 (lower is better)
Translates to: RSHATTFQSIWGYLLWGQSSQWY*TILSSS
Trigger: TGATGATGATAAAATCGTTCAGTACCATTGGGAAGA...CTGTCCCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGTTGTGTCAGTCACTGTaGGCTGGTAAGTGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: GPPDRFKEETSSFTASLRLCQSL*AGKCSL
Trigger: GAGACTACACTTACCAGCTCACAGTGACTGACACAA...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCTCCCCTGCTGGCACCTaGTCTCACTGGCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGSPAGT*SHWHLL
Trigger: CAACAGATGCCAGTGAGAGCAGGTGCCAGCAGGGGA...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR GCA 90 bp CTTCCCAATGGTACTGAACGATTTTATCATCATCAGTGGACTGCCATCAATGACTACAGCAGGTCTGAGTaGAGCTCTGGGTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LPNGTERFYHHQWTAINDYSRSE*SSGWAL
Trigger: CAGAGCCCACCCAGAGCTGCACTCAGACCTGCTGTA...GTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTCAGTACCATTGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR GCA 90 bp GAACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCGCCTTGTGGACCTCTaGAGAGCCACTGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: ERFYHHQWTAINDCRSGWRLVDL*RATGSQ
Trigger: CTGACTACCAGTGGCTCTGCAGAGGTCCACAAGGCG...CCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp TATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCCAGCCTCTTCTCCATaGCCCTCCAGACAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: YHHQWTAINDCRSGWQRDPASSP*PSRQAE
Trigger: TTCTGCCTGTCTGGAGGGCCATGGAGAAGAGGCTGG...ATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCTGTGTCTTCCCCTGCTaGCACCTGCTCTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGCVFPC*HLLSLA
Trigger: TGCCAGTGAGAGCAGGTGCCAGCAGGGGAAGACACA...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp ACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTCCTGGAACTGAGGCTGCAGTCAGGTCTGTaGTTAGGGGACTGGAAATTG +
Preference number: 4 (lower is better)
Translates to: TAINDCRSGWQRDLLELRLQSGL*LGDWKL
Trigger: CAATTTCCAGTCCCCTAACCACAGACCTGACTGCAG...CCTCAGTTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp GCACACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCGATAGTTTGAGGATCTaGGAATGTTTCCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: AHMRSHATTFQSIWGYLLDSLRI*ECFPSI
Trigger: AATGGAAGGGAAACATTCCCAGATCCTCAAACTATC...GAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp CATAACTGTAGGAGGGAGCCACTGGCTGGGGGACAGCAATCTGGGTTTTCTCAGGATAGTTTGAGGATCTaGGAATGTTTCCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: HNCRREPLAGGQQSGFSQDSLRI*ECFPSI
Trigger: AATGGAAGGGAAACATTCCCAGATCCTCAAACTATC...CTGAGAAAACCCAGATTGCTGTCCCCCAGCCAGTGGCTCCCTCCTACAGTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR TCA 90 bp TATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTGCTGCAGTCTGCCTaGATGCACATCCCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: YHHQWTAINDCRSGWQRDLLQSA*MHIPSS
Trigger: GCTAGAAGGGATGTGCATTCAGGCAGACTGCAGCAG...ATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCTCTTCTGAAGCTTCCTaGTTAAGCTCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: PDRFKEETSSFTASLRGSSSEAS*LSSAGH
Trigger: GTGACCAGCAGAGCTTAATCAGGAAGCTTCAGAAGA...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR TCA 90 bp CTTCCCAATGGTACTGAACGATTTTATCATCATCAGTGGACTGCCATCAATGACTACGGGGCTCTGGCTTaGCTGTCACGTTCACATAGC +
Preference number: 4 (lower is better)
Translates to: LPNGTERFYHHQWTAINDYGALA*LSRSHS
Trigger: GCTATGTGAACGTGACAGTCAAGCCAGAGCCCCGTA...GTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTCAGTACCATTGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp ACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTCCTGGAACTGAGGGAGATCTCCTGGAACTaGGGTGACACAATAGCAATG +
Preference number: 4 (lower is better)
Translates to: TAINDCRSGWQRDLLELREISWN*GDTIAM
Trigger: CATTGCTATTGTGTCACCTCAGTTCCAGGAGATCTC...CCTCAGTTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR GCA 90 bp GCACACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTTGGGTTTTCCTTTTTaGCTCTTACAACAACAGATC +
Preference number: 4 (lower is better)
Translates to: AHMRSHATTFQSIWGYLLLGFPF*LLQQQI
Trigger: GATCTGTTGTTGTAAGAGGCAAAAAGGAAAACCCAA...GAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR GCA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGTCTAACACGCACACATaGAAGGGACACAGAACACAT +
Preference number: 4 (lower is better)
Translates to: GPPDRFKEETSSFTASLRSNTHT*KGHRTH
Trigger: ATGTGTTCTGTGTCCCTTGCATGTGTGCGTGTTAGA...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCGCAGCCCAACATGACTaGAGAGAGGGGGTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGAAQHD*REGVPS
Trigger: TGAAGGAACCCCCTCTCTCCAGTCATGTTGGGCTGC...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp GGAGTGAGCTTCGATAGTTTGAGGATCTGGGAATGTTTCCCTTCCATTTCTCCACTGCAGTCAGGTCTGTaGTTAGGGGACTGGAAATTG +
Preference number: 4 (lower is better)
Translates to: GVSFDSLRIWECFPSISPLQSGL*LGDWKL
Trigger: CAATTTCCAGTCCCCTAACCACAGACCTGACTGCAG...TGGAGAAATGGAAGGGAAACATTCCCAGATCCTCAAACTATCGAAGCTCACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR TCA 90 bp CTTCCCAATGGTACTGAACGATTTTATCATCATCAGTGGACTGCCATCAATGACAAGCAGGATTTGGCTTaGCTCCCAGCCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LPNGTERFYHHQWTAINDKQDLA*LPASSP
Trigger: TGGAGAAGAGGCTGGGAGTCAAGCCAAATCCTGCTT...GTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTCAGTACCATTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp ACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTCCTGGAACTGAGGTATTTCAGGTTGCACTaGTACATTCTTTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: TAINDCRSGWQRDLLELRYFRLH*YILWPT
Trigger: GGTGGGCCAAAGAATGTATCAGTGCAACCTGAAATA...CCTCAGTTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp AATCAGCTGCCAGTCGTAGGTGTAGGTTTCTCCTTTAGGTGGTTCTTGGAGAACCCTCTACAATCACTTTaGATTCATACAGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: NQLPVVGVGFSFRWFLENPLQSL*IHTGLE
Trigger: CTCCAGGCCTGTATGAATTCAAAGTGATTGTAGAGG...GTTCTCCAAGAACCACCTAAAGGAGAAACCTACACCTACGACTGGCAGCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR GCA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCAATTGTGTCTTCCCCTaGTGGCACCTGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGNCVFP*WHLLSL
Trigger: CAGTGAGAGCAGGTGCCAGCAGGGGAAGACACAATT...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR GCA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCAAAATACCATTTTGGTaGTCTGCTCCGTGTACGGCT +
Preference number: 4 (lower is better)
Translates to: PDRFKEETSSFTASLRGSKIPFW*SAPCTA
Trigger: AGCCGTACACGGAGCAGAGCACCAAAATGGTATTTT...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR GCA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGAATATCAAAAAGTCTaGCTTTTGCTTCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GPPDRFKEETSSFTASLREYQKV*LLLPQL
Trigger: GAGCTGCGGAAGCAAAAGGCAGACTTTTTGATATTC...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CCA 90 bp CTTCCCAATGGTACTGAACGATTTTATCATCATCAGTGGACTGCCATCAATGACCCAGGAAGCAGGATTTaGCTTGACTCCCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LPNGTERFYHHQWTAINDPGSRI*LDSQPL
Trigger: AAGAGGCTGGGAGTCAAGCCAAATCCTGCTTCCTGG...GTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTCAGTACCATTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp ACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTCCTGGAACTGAGGGGAGTGAGCTTTAGGTaGTTCTTGGAGAACATATGC +
Preference number: 4 (lower is better)
Translates to: TAINDCRSGWQRDLLELRGVSFR*FLENIC
Trigger: GCATATGTTCTCCAAGAACCACCTAAAGCTCACTCC...CCTCAGTTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCAGAACCAGTACACATTaGCCAGAGCCCGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGRTSTH*PEPGVK
Trigger: CTTCACTCCGGGCTCTGGCCAATGTGTACTGGTTCT...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
3UTR CAA 72 bp AGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTaGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGT +
Preference number: 4 (lower is better)
Translates to: RFKEETSSFTAS*RGSWRTSLDSS
Trigger: ACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR TCA 90 bp CTTCCCAATGGTACTGAACGATTTTATCATCATCAGTGGACTGCCATCAATGACCTCACTGGCATCTGTTaGCAACCACAGAACGCTGAA +
Preference number: 4 (lower is better)
Translates to: LPNGTERFYHHQWTAINDLTGIC*QPQNAE
Trigger: TTCAGCGTTCTGTGGTTGTCAACAGATGCCAGTGAG...GTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTCAGTACCATTGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp TATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATTCAAGAAGCCAGAGGTaGTTTTCTCCCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: YHHQWTAINDCRSGWQRDSRSQR*FSPPDL
Trigger: GAGATCTGGGGGAGAAAATCACCTCTGGCTTCTTGA...ATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp GTGAGCTTCGATAGTTTGAGGATCTGGGAATGTTTCCCTTCCATTTCTCCACTGGAACTTTTTACTTGTTaGGTGCTGGGCGTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: VSFDSLRIWECFPSISPLELFTC*VLGVVA
Trigger: TGCTACTACGCCCAGCACTCAACAAGTAAAAAGTTC...CAGTGGAGAAATGGAAGGGAAACATTCCCAGATCCTCAAACTATCGAAGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR TCA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGTTGGTTCCAAGGAGATaGAAGTCTTTCCAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: GPPDRFKEETSSFTASLRLVPRR*KSFQVK
Trigger: TTTGACTTGGAAAGACTTTCATCTCCTTGGAACCAA...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCATTGTAATCGCCTTGTaGACCTCTGCAGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGIVIAL*TSAEPL
Trigger: CAGTGGCTCTGCAGAGGTCCACAAGGCGATTACAAT...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp ACCATGTTTAATCATCCCACAATGGACAGTAGTGCAGTAGTAGAAATTATAAGTGAGGGAGCCACTGGCTaGGGGACAGCAATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: TMFNHPTMDSSAVVEIISEGATG*GTAIWV
Trigger: AACCCAGATTGCTGTCCCCCAGCCAGTGGCTCCCTC...ACTTATAATTTCTACTACTGCACTACTGTCCATTGTGGGATGATTAAACATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCATTCTTACGGGGCTCTaGCTTGACTGTCACGTTCAC +
Preference number: 4 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGILTGL*LDCHVH
Trigger: GTGAACGTGACAGTCAAGCCAGAGCCCCGTAAGAAT...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp TCCACTGTAGTCTCTAGGATGAGTAATCAGCTGCCAGTCGTAGGTGTAGGTTTCACAACCACAGAACGCTaGAGCAAAAGCAAGTATAAA +
Preference number: 4 (lower is better)
Translates to: STVVSRMSNQLPVVGVGFTTTER*SKSKYK
Trigger: TTTATACTTGCTTTTGCTTCAGCGTTCTGTGGTTGT...GAAACCTACACCTACGACTGGCAGCTGATTACTCATCCTAGAGACTACAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR TCA 90 bp GAACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGTCTTCTGAAGCTTCCTaGTTAAGCTCTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: ERFYHHQWTAINDCRSGWSSEAS*LSSAGH
Trigger: GTGACCAGCAGAGCTTAATCAGGAAGCTTCAGAAGA...CCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp ACCATGTTTAATCATCCCACAATGGACAGTAGTGCAGTAGTAGAAATTATAAGTCCACCTCATGGCCTTTaGAGATCTGGTGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TMFNHPTMDSSAVVEIISPPHGL*RSGGEA
Trigger: AGCCTCCCCACCAGATCTTCAAAGGCCATGAGGTGG...ACTTATAATTTCTACTACTGCACTACTGTCCATTGTGGGATGATTAAACATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CCA 90 bp GGAGTGAGCTTCGATAGTTTGAGGATCTGGGAATGTTTCCCTTCCATTTCTCCATGGGGGACAGCAATCTaGGTTTTCTCAGAACTTTTT +
Preference number: 4 (lower is better)
Translates to: GVSFDSLRIWECFPSISPWGTAI*VFSELF
Trigger: AAAAAGTTCTGAGAAAACCCAGATTGCTGTCCCCCA...TGGAGAAATGGAAGGGAAACATTCCCAGATCCTCAAACTATCGAAGCTCACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR TCA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCGAACTTTTTACTTGTTaGGTGCTGGGCGTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGELFTC*VLGVVA
Trigger: TGCTACTACGCCCAGCACTCAACAAGTAAAAAGTTC...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp TATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCCTCTACAATCACTTTaGATTCATACAGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: YHHQWTAINDCRSGWQRDPLQSL*IHTGLE
Trigger: CTCCAGGCCTGTATGAATTCAAAGTGATTGTAGAGG...ATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp GAACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGGACTGTAGAAGTGGTTaGCAAAGAGATCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ERFYHHQWTAINDCRSGWDCRSG*QRDLLE
Trigger: TTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTC...CCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR GCA 90 bp GGAGTGAGCTTCGATAGTTTGAGGATCTGGGAATGTTTCCCTTCCATTTCTCCATCTGATATTTCAGGTTaGACTGATACATTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GVSFDSLRIWECFPSISPSDISG*TDTFFG
Trigger: GCCAAAGAATGTATCAGTGCAACCTGAAATATCAGA...TGGAGAAATGGAAGGGAAACATTCCCAGATCCTCAAACTATCGAAGCTCACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR CCA 90 bp GAACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGTTAAAAACACCAGCATaGAATTGGAGGAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: ERFYHHQWTAINDCRSGWLKTPA*NWRSVS
Trigger: GGACACACTCCTCCAATTCCATGCTGGTGTTTTTAA...CCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCTGGGGGACAGCAATCTaGGTTTTCTCAGAACTTTTT +
Preference number: 4 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGWGTAI*VFSELF
Trigger: AAAAAGTTCTGAGAAAACCCAGATTGCTGTCCCCCA...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR TCA 90 bp GAACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGTCTTCCCAATGGTACTaGACGATTTTATCATCATCA +
Preference number: 4 (lower is better)
Translates to: ERFYHHQWTAINDCRSGWSSQWY*TILSSS
Trigger: TGATGATGATAAAATCGTTCAGTACCATTGGGAAGA...CCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR GCA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCTCTGATATTTCAGGTTaGACTGATACATTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGSDISG*TDTFFG
Trigger: GCCAAAGAATGTATCAGTGCAACCTGAAATATCAGA...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp GAACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGTTTTATCATCATCAGTaGACTGCCATCAATGACTGT +
Preference number: 4 (lower is better)
Translates to: ERFYHHQWTAINDCRSGWFYHHQ*TAINDC
Trigger: ACAGTCATTGATGGCAGTCCACTGATGATGATAAAA...CCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CCA 90 bp GAACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGGCTTTAGGTGGTTCTTaGAGAACATATGCATTTAAT +
Preference number: 4 (lower is better)
Translates to: ERFYHHQWTAINDCRSGWALGGS*RTYAFN
Trigger: ATTAAATGCATATGTTCTCCAAGAACCACCTAAAGC...CCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS TCA 90 bp GGGTGGAGCTGCAGCAGCCTGGAGCCAGGAGTGGGCAACGCGGCGTaGGCAGCGGCCCGAGGCTCCCGGAGCATCGCGCTGGGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: GWSCSSLEPGVGNAA*AAARGSRSIALGED
Trigger: GTCTTCTCCCAGCGCGATGCTCCGGGAGCCTCGGGCCGCTGCTCACGCCGCGTTGCCCACTCCTGGCTCCAGGCTGCTGCAGCTCCACCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CAA 90 bp CCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCGCCACCTCATGGCCTTaGAAGATCTGGTGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: PADSGGRRTGRAVCWALPATSWP*KIWWGG
Trigger: GCCTCCCCACCAGATCTTCAAAGGCCATGAGGTGGC...GGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp CCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCTGCCTGCTCGGGAGGTaGGCTTCAGCTCCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: PADSGGRRTGRAVCWALPCLLGR*ASAPGF
Trigger: AAAGCCTGGAGCTGAAGCCAACCTCCCGAGCAGGCA...GGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS GCA 90 bp CAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTaGCCTGAGGAGACAGACCAGGTGGCTACAGGATCTCCTCCCGCG +
Preference number: 5 (lower is better)
Translates to: QTREVGGLAGQCAGP*PEETDQVATGSPPA
Trigger: CGCGGGAGGAGATCCTGTAGCCACCTGGTCTGTCTCCTCAGGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp CCTCTGGGGACAGGGAGCGGTGGCCTAAGCCCCGAAGCAGCAGGTGCCGGTCAGCCACAGTGCTTGGTTTaGCACTCAGGTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: PLGTGSGGLSPEAAGAGQPQCLV*HSGVRA
Trigger: TGCCCGCACACCTGAGTGCAAAACCAAGCACTGTGG...CTGACCGGCACCTGCTGCTTCGGGGCTTAGGCCACCGCTCCCTGTCCCCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACGCCACCTCATGGCCTTaGAAGATCTGGTGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHATSWP*KIWWGG
Trigger: GCCTCCCCACCAGATCTTCAAAGGCCATGAGGTGGC...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTTTCCGCAGCTCACTCTaGAGCATCGCTGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCFRSSL*SIAATS
Trigger: TGAGGTGGCAGCGATGCTCAAGAGTGAGCTGCGGAA...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS CCA 90 bp GAGGAGACAGACCAGGTGGCTACAGGATCTCCTCCCGCGGGCTCCTaGCCTTCAGAGGGGTCTGCCCGTTGGGTACAGAGCCATTCTGAC +
Preference number: 5 (lower is better)
Translates to: EETDQVATGSPPAGS*PSEGSARWVQSHSD
Trigger: GTCAGAATGGCTCTGTACCCAACGGGCAGACCCCTCTGAAGGCCAGGAGCCCGCGGGAGGAGATCCTGTAGCCACCTGGTCTGTCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACTCCCAGGGGTTCTGGTaGGGACTGTCAGGGCGAAAT +
Preference number: 5 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHSQGFW*GLSGRN
Trigger: ATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGGA...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp TGGGACAGCAGCTGCCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTTCATTCACAGCTTCGTaGAGGGGTTCCTGGAGGACG +
Preference number: 5 (lower is better)
Translates to: WDSSCPQTREVGGLAGQCSFTAS*RGSWRT
Trigger: CGTCCTCCAGGAACCCCTCAACGAAGCTGTGAATGA...ACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGGCAGCTGCTGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS CCA 90 bp GGATCTCCTCCCGCGGGCTCCTGGCCTTCAGAGGGGTCTGCCCGTTaGGTACAGAGCCATTCTGACCATGCAGGAGTTTGCCCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: GSPPAGSWPSEGSAR*VQSHSDHAGVCPSL
Trigger: GAGAGAAGGGCAAACTCCTGCATGGTCAGAATGGCTCTGTACCCAACGGGCAGACCCCTCTGAAGGCCAGGAGCCCGCGGGAGGAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp CAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATGCTGGGACAGGGGCAGGGTGATCACTaGGTTGGGGCCTGCGTTGGC +
Preference number: 5 (lower is better)
Translates to: QGFWLGLSGRNDQQMLGQGQGDH*VGACVG
Trigger: GCCAACGCAGGCCCCAACCAAGTGATCACCCTGCCC...CTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS CCA 90 bp GACCTAGAAGCTCTGGCACCCAGGGCCCCTACCTGCTCGGGAGGTTaGCTTCAGCTCCAGGCTTTCCTGATCCGTGGCATCCAGGATCTT +
Preference number: 5 (lower is better)
Translates to: DLEALAPRAPTCSGG*LQLQAFLIRGIQDL
Trigger: AAGATCCTGGATGCCACGGATCAGGAAAGCCTGGAGCTGAAGCCAACCTCCCGAGCAGGTAGGGGCCCTGGGTGCCAGAGCTTCTAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS-3UTR CAA 90 bp CCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCATCATCATCAGTGCTTaGACTGCCATCAATGACTGT +
Preference number: 5 (lower is better)
Translates to: PADSGGRRTGRAVCWALPIIISA*TAINDC
Trigger: ACAGTCATTGATGGCAGTCAAAGCACTGATGATGAT...GGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGAGGGTGATCACTTGGTaGGGGCCTGCGTTGGCCACA +
Preference number: 5 (lower is better)
Translates to: QQASPCSTLGTMTLSTGERVITW*GPALAT
Trigger: TGTGGCCAACGCAGGCCCCAACCAAGTGATCACCCT...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGTGCTGCCATCCAGGGTaGTGCTATCCACAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: RGATSSLPSERAYSTPERCCHPG*CYPQEG
Trigger: CCCTTCCTGTGGATAGCACAACCCTGGATGGCAGCA...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTTGCTGCCATCCAGGGTaGTGCTATCCACAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTCCHPG*CYPQEG
Trigger: CCCTTCCTGTGGATAGCACAACCCTGGATGGCAGCA...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp CCCGCAGACTCGGGAGGTAGGAGGACTGGCCGGGCAGTGTGCTGGGCCCTGCCCTCCAGGATCTTGTACTaGCTTTTCCTCTTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: PADSGGRRTGRAVCWALPSRILY*LFLLGF
Trigger: AAAACCCAAGAGGAAAAGCAAGTACAAGATCCTGGA...GGGCAGGGCCCAGCACACTGCCCGGCCAGTCCTCCTACCTCCCGAGTCTGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGCCACAGTGCTTGGTTTaGCACTCAGGTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: RGATSSLPSERAYSTPERPQCLV*HSGVRA
Trigger: TGCCCGCACACCTGAGTGCAAAACCAAGCACTGTGG...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCAGGCCAACTCCAAATaGTGTCTTCCCCTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTQANSK*CLPLLA
Trigger: TGCCAGCAGGGGAAGACACAATTTGGAGTTGGCCTG...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp CCTCTGGGGACAGGGAGCGGTGGCCTAAGCCCCGAAGCAGCAGGTGCCGGTCAGTTCCCCATGGGCATTTaGACCCTCTACAATCACTTT +
Preference number: 5 (lower is better)
Translates to: PLGTGSGGLSPEAAGAGQFPMGI*TLYNHF
Trigger: AAAGTGATTGTAGAGGGTCAAAATGCCCATGGGGAA...CTGACCGGCACCTGCTGCTTCGGGGCTTAGGCCACCGCTCCCTGTCCCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACCACAGAGCTCTGGCTTaGCAGGTTCCTCTCATCTTT +
Preference number: 5 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHHRALA*QVPLIF
Trigger: AAAGATGAGAGGAACCTGCAAAGCCAGAGCTCTGTG...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTTCATTCACAGCTTCGTaGAGGGGTTCCTGGAGGACG +
Preference number: 5 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTSFTAS*RGSWRT
Trigger: CGTCCTCCAGGAACCCCTCAACGAAGCTGTGAATGA...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp GCACTCAGGTGTGCGGGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACATGATCTCCACCAGGTaGTTTTTCCTGGGATCAGGT +
Preference number: 5 (lower is better)
Translates to: ALRCAGSTAGLTLQHSGHMISTR*FFLGSG
Trigger: ACCTGATCCCAGGAAAAACAACCTGGTGGAGATCAT...GTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCCCGCACACCTGAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGCCATGCCCACAGTGCTaGGTTTTGCACTCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: QQASPCSTLGTMTLSTGEPCPQC*VLHSGV
Trigger: CACACCTGAGTGCAAAACCAAGCACTGTGGGCATGG...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp GGCAGCACAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACCCATGCCCACAGTGCTaGGTTTTGCACTCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: GSTAGLTLQHSGHNDTVHPCPQC*VLHSGV
Trigger: CACACCTGAGTGCAAAACCAAGCACTGTGGGCATGG...GTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTGTGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGGGTGCCACTTCCTCTTaGCCCAGCGAGAGGGCGTAC +
Preference number: 5 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRGATSS*PSERAY
Trigger: GTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACC...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS TCA 90 bp CTCCTGGCCTTCAGAGGGGTCTGCCCGTTGGGTACAGAGCCATTCTaGCCATGCAGGAGTTTGCCCTTCTCTCGGTCTGGCCATGTAAAG +
Preference number: 5 (lower is better)
Translates to: LLAFRGVCPLGTEPF*PCRSLPFSRSGHVK
Trigger: CTTTACATGGCCAGACCGAGAGAAGGGCAAACTCCTGCATGGTCAGAATGGCTCTGTACCCAACGGGCAGACCCCTCTGAAGGCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS TCA 90 bp GGGCCCCTACCTGCTCGGGAGGTTGGCTTCAGCTCCAGGCTTTCCTaGTCCGTGGCATCCAGGATCTTGTACTTGCTTTTCCTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: GPLPAREVGFSSRLS*SVASRILYLLFLLG
Trigger: ACCCAAGAGGAAAAGCAAGTACAAGATCCTGGATGCCACGGATCAGGAAAGCCTGGAGCTGAAGCCAACCTCCCGAGCAGGTAGGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS GCA 90 bp CCCACCACCTCCAGTCTCCACCTTGACAGTGTTGGTGGATCGAGCTaGTTGGTGCAGAGTCCAGACTGCTGTGAGCCTGTTCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PTTSSLHLDSVGGSS*LVQSPDCCEPVLFC
Trigger: GCAGAAGAGAACAGGCTCACAGCAGTCTGGACTCTGCACCAAGCAGCTCGATCCACCAACACTGTCAAGGTGGAGACTGGAGGTGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS GCA 90 bp CCTCATTCTCAATATTCCTGGGTGAAATGCCCCGCCCGCCCTCACTaGTCTGGTTTCCTGGGCTCATTTCAAGCCCCACCACCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: PHSQYSWVKCPARPH*SGFLGSFQAPPPPV
Trigger: GACTGGAGGTGGTGGGGCTTGAAATGAGCCCAGGAAACCAGAGCAGTGAGGGCGGGCGGGGCATTTCACCCAGGAATATTGAGAATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS-3UTR CAA 90 bp AGGGGTAGCATAACTGTAGGAGGGAGCCACTGGCTGGGGGACAGCAATCTGGGTGAAGCAGGATTTGGCTaGACTCCCAGCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RGSITVGGSHWLGDSNLGEAGFG*TPSLFS
Trigger: GGAGAAGAGGCTGGGAGTCAAGCCAAATCCTGCTTC...ACCCAGATTGCTGTCCCCCAGCCAGTGGCTCCCTCCTACAGTTATGCTACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR CAA 90 bp TCTGTGGTGAGGGGAGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTTGTCACTCTCACCCTTaGCATCGGTCACTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: SVVRGGVPLPLCPARGRTCHSHP*HRSLSG
Trigger: ACCTGAAAGTGACCGATGCAAAGGGTGAGAGTGACA...AGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCTCCCCTCACCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp ACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGTGCCTGCTCGGGAGGTaGGCTTCAGCTCCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: TCALMPQHSSPSGAISSGCLLGR*ASAPGF
Trigger: AAAGCCTGGAGCTGAAGCCAACCTCCCGAGCAGGCA...CCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp GGGCCGATTCTTACGGGGCTCTGGCTTGACTGTCACGTTCACATAGCCTTCCCCCAGAACCAGTACACATaGGCCAGAGCCCGGAGTGAA +
Preference number: 5 (lower is better)
Translates to: GPILTGLWLDCHVHIAFPQNQYT*ARARSE
Trigger: TTCACTCCGGGCTCTGGCCAATGTGTACTGGTTCTG...GGGGAAGGCTATGTGAACGTGACAGTCAAGCCAGAGCCCCGTAAGAATCGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS TCA 90 bp AGAGTGGCAGCAAAGGGAAGAAAGTCAACAAGACTCAGCCAGGGGTaGCAAGCAGCACCTAGAGCCCATGAGGGCACCAAAGCACCCCAG +
Preference number: 5 (lower is better)
Translates to: RVAAKGRKSTRLSQG*QAAPRAHEGTKAPQ
Trigger: CTGGGGTGCTTTGGTGCCCTCATGGGCTCTAGGTGCTGCTTGTCACCCCTGGCTGAGTCTTGTTGACTTTCTTCCCTTTGCTGCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473423.1
CDS GCA 90 bp CAGTGGCTCCCCATTGTACTCAAGAGAAGTCCTCAGCAGGGACCCTaGTCATCCATTGAGCCTTGGGTCACTCACCCCTTACTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: QWLPIVLKRSPQQGP*SSIEPWVTHPLLCG
Trigger: CCCACAGAGTAAGGGGTGAGTGACCCAAGGCTCAATGGATGAGCAGGGTCCCTGCTGAGGACTTCTCTTGAGTACAATGGGGAGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CCA 90 bp TGGGTTTTGCACATTTCACCTCCAGGCCCTCATTCTCAATATTCCTaGGTGAAATGCCCCGCCCGCCCTCACTGCTCTGGTTTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: WVLHISPPGPHSQYS*VKCPARPHCSGFLG
Trigger: GCCCAGGAAACCAGAGCAGTGAGGGCGGGCGGGGCATTTCACCCAGGAATATTGAGAATGAGGGCCTGGAGGTGAAATGTGCAAAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS-3UTR CAA 90 bp AAGGGCCCTGGCAGCGAGAGAGGCCACCCGCCATCCCTGACACAGTCAATCCTCAACACCAGCATGGAATaGGAGGAGTGTGTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: KGPGSERGHPPSLTQSILNTSME*EECVLK
Trigger: TTTTAGGACACACTCCTCCAATTCCATGCTGGTGTT...GAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCTCTCGCTGCCAGGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGGAAATTGTAATCGCCTaGTGGACCTCTGCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: QQASPCSTLGTMTLSTGEEIVIA*WTSAEP
Trigger: TGGCTCTGCAGAGGTCCACAAGGCGATTACAATTTC...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp GGGCCGATTCTTACGGGGCTCTGGCTTGACTGTCACGTTCACATAGCCTTCCCCGCACTGATACATTCTTaGGCCCACCAGACAGCTCTG +
Preference number: 5 (lower is better)
Translates to: GPILTGLWLDCHVHIAFPALIHS*AHQTAL
Trigger: CAGAGCTGTCTGGTGGGCCAAAGAATGTATCAGTGC...GGGGAAGGCTATGTGAACGTGACAGTCAAGCCAGAGCCCCGTAAGAATCGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS TCA 90 bp CAGGTGACCCAGCCCAGCGGAGGAAGGAAGGCCTACTACCTGCCCTaGTCTCCCAGTGCCATCACTCAAAGTCATCTTACTGTTTGTGCA +
Preference number: 5 (lower is better)
Translates to: QVTQPSGGRKAYYLP*SPSAITQSHLTVCA
Trigger: TGCACAAACAGTAAGATGACTTTGAGTGATGGCACTGGGAGATCAGGGCAGGTAGTAGGCCTTCCTTCCTCCGCTGGGCTGGGTCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS GCA 90 bp CCTCCAGTCTCCACCTTGACAGTGTTGGTGGATCGAGCTGCTTGGTaGAGAGTCCAGACTGCTGTGAGCCTGTTCTCTTCTGCTACTGTG +
Preference number: 5 (lower is better)
Translates to: PPVSTLTVLVDRAAW*RVQTAVSLFSSATV
Trigger: CACAGTAGCAGAAGAGAACAGGCTCACAGCAGTCTGGACTCTGCACCAAGCAGCTCGATCCACCAACACTGTCAAGGTGGAGACTGGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS-3UTR CAA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGGAAGCAGGATTTGGCTaGACTCCCAGCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FTASLRGSWRTSLDSSPREAGFG*TPSLFS
Trigger: GGAGAAGAGGCTGGGAGTCAAGCCAAATCCTGCTTC...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp ACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGGGGAGGGTGATGGAGTTTaGGGGCAGGGTGATCACTTG +
Preference number: 5 (lower is better)
Translates to: TCALMPQHSSPSGAISSGEGDGV*GQGDHL
Trigger: CAAGTGATCACCCTGCCCCAAAACTCCATCACCCTC...CCCAGAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCCACAGAGCTCTGGCTTaGCAGGTTCCTCTCATCTTT +
Preference number: 5 (lower is better)
Translates to: SSLPSERAYSTPERETPCHRALA*QVPLIF
Trigger: AAAGATGAGAGGAACCTGCAAAGCCAGAGCTCTGTG...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp AGGGGTGCCACTTCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGTACGGCTGAATCTTTaGCACAATGATGTCGGAATC +
Preference number: 5 (lower is better)
Translates to: RGATSSLPSERAYSTPERVRLNL*HNDVGI
Trigger: GATTCCGACATCATTGTGCAAAAGATTCAGCCGTAC...CCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS TCA 90 bp TCACTGGATGCTGCTCGGGAGGTTGGCTTCAGCTCCAGGCTTTCCTaGTCCGTGGCATCCAGGATCTTGTACTTGCTTTTCCTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: SLDAAREVGFSSRLS*SVASRILYLLFLLG
Trigger: ACCCAAGAGGAAAAGCAAGTACAAGATCCTGGATGCCACGGATCAGGAAAGCCTGGAGCTGAAGCCAACCTCCCGAGCAGCATCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461312.5
CDS TCA 90 bp TTTTGCACATTTCACCTCCAGGCCCTCATTCTCAATATTCCTGGGTaGAATGCCCCGCCCGCCCTCACTGCTCTGGTTTCCTGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: FCTFHLQALILNIPG*NAPPALTALVSWAH
Trigger: ATGAGCCCAGGAAACCAGAGCAGTGAGGGCGGGCGGGGCATTTCACCCAGGAATATTGAGAATGAGGGCCTGGAGGTGAAATGTGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS GCA 90 bp GCCCAGCGGAGGAAGGAAGGCCTACTACCTGCCCTGATCTCCCAGTaGCATCACTCAAAGTCATCTTACTGTTTGTGCAAGGAAATGCCC +
Preference number: 5 (lower is better)
Translates to: AQRRKEGLLPALISQ*HHSKSSYCLCKEMP
Trigger: GGGCATTTCCTTGCACAAACAGTAAGATGACTTTGAGTGATGGCACTGGGAGATCAGGGCAGGTAGTAGGCCTTCCTTCCTCCGCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS GCA 90 bp CACATTTCACCTCCAGGCCCTCATTCTCAATATTCCTGGGTGAAATaGCCCGCCCGCCCTCACTGCTCTGGTTTCCTGGGCTCATTTCAA +
Preference number: 5 (lower is better)
Translates to: HISPPGPHSQYSWVK*PARPHCSGFLGSFQ
Trigger: TTGAAATGAGCCCAGGAAACCAGAGCAGTGAGGGCGGGCGGGGCATTTCACCCAGGAATATTGAGAATGAGGGCCTGGAGGTGAAATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS-3UTR CAA 90 bp GCACACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCGCACTGATACATTCTTaGGCCCACCAGACAGCTCTG +
Preference number: 5 (lower is better)
Translates to: AHMRSHATTFQSIWGYLLALIHS*AHQTAL
Trigger: CAGAGCTGTCTGGTGGGCCAAAGAATGTATCAGTGC...GAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGAGAACTTTTTACTTGTaGAGTGCTGGGCGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: QQASPCSTLGTMTLSTGERTFYL*SAGRSS
Trigger: GCTACTACGCCCAGCACTCAACAAGTAAAAAGTTCT...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCGGTGCCACTTCCTCTTaGCCCAGCGAGAGGGCGTAC +
Preference number: 5 (lower is better)
Translates to: PDRFKEETSSFTASLRGSGATSS*PSERAY
Trigger: GTACGCCCTCTCGCTGGGCAAAGAGGAAGTGGCACC...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS TCA 90 bp TGTTTGATGCCTGCTCGGGAGGTTGGCTTCAGCTCCAGGCTTTCCTaGTCCGTGGCATCCAGGATCTTGTACTTGCTTTTCCTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: CLMPAREVGFSSRLS*SVASRILYLLFLLG
Trigger: ACCCAAGAGGAAAAGCAAGTACAAGATCCTGGATGCCACGGATCAGGAAAGCCTGGAGCTGAAGCCAACCTCCCGAGCAGGCATCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
CDS CCA 90 bp ACCTTGGGCATGGTGCCTGCCTTTCTCATCTCGACTGGACAAAACTaGAGCAGTCAGGAGGCCACTAGAAAGACACTTCCAGCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: TLGMVPAFLISTGQN*SSQEATRKTLPACL
Trigger: AAGACAGGCTGGAAGTGTCTTTCTAGTGGCCTCCTGACTGCTCCAGTTTTGTCCAGTCGAGATGAGAAAGGCAGGCACCATGCCCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473423.1
CDS-3UTR CAA 90 bp AGGGGTAGCATAACTGTAGGAGGGAGCCACTGGCTGGGGGACAGCAATCTGGGTAGAACTTTTTACTTGTaGAGTGCTGGGCGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: RGSITVGGSHWLGDSNLGRTFYL*SAGRSS
Trigger: GCTACTACGCCCAGCACTCAACAAGTAAAAAGTTCT...ACCCAGATTGCTGTCCCCCAGCCAGTGGCTCCCTCCTACAGTTATGCTACCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR CAA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCGTGAGCTTCGATAGTTaGAGGATCTGGGAATGTTTC +
Preference number: 5 (lower is better)
Translates to: SSLPSERAYSTPERETPCVSFDS*RIWECF
Trigger: GAAACATTCCCAGATCCTCAAACTATCGAAGCTCAC...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp GGGCCGATTCTTACGGGGCTCTGGCTTGACTGTCACGTTCACATAGCCTTCCCCCCCTCTACAATCACTTaGAATTCATACAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: GPILTGLWLDCHVHIAFPPSTIT*NSYRPG
Trigger: TCCAGGCCTGTATGAATTCAAAGTGATTGTAGAGGG...GGGGAAGGCTATGTGAACGTGACAGTCAAGCCAGAGCCCCGTAAGAATCGGCCC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CAA 90 bp GCACACATGCGCTCTCATGCCACAACATTCCAGTCCATCTGGGGCTATCTCCTCTGTCACTCTCACCCTTaGCATCGGTCACTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: AHMRSHATTFQSIWGYLLCHSHP*HRSLSG
Trigger: ACCTGAAAGTGACCGATGCAAAGGGTGAGAGTGACA...GAGGAGATAGCCCCAGATGGACTGGAATGTTGTGGCATGAGAGCGCATGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGTCACAGATACAGCGTTaGGTGAACGAGTCACAGTGG +
Preference number: 5 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRSQIQR*VNESQW
Trigger: CCACTGTGACTCGTTCACCAAACGCTGTATCTGTGA...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp CCTGAGGTGAGGATATCTGGGGGCCCACCAGACAGGTTTAAAGAGGAAACCTCTCAAGAGCCCAATGAGTaGATGCATACGCGCTCACTC +
Preference number: 5 (lower is better)
Translates to: PEVRISGGPPDRFKEETSQEPNE*MHTRSL
Trigger: GAGTGAGCGCGTATGCATCAACTCATTGGGCTCTTG...AGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCCCCCAGATATCCTCACCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp TCCTCTTTGCCCAGCGAGAGGGCGTACTCTACCCCAGAGAGGGAAACACCATGCCTTTCCAAGTCAAATTaGCCTTGTGAGCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: SSLPSERAYSTPERETPCLSKSN*PCEQPR
Trigger: TCTTGGCTGCTCACAAGGCAAATTTGACTTGGAAAG...GCATGGTGTTTCCCTCTCTGGGGTAGAGTACGCCCTCTCGCTGGGCAAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS TCA 90 bp AACACCCTGCATCTCCACCACTTTCCCTTTGCTGCTTGGGCTGAGTaGCCACTCATAGCTGGTGATGCCATGATCATCAGTGCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: NTLHLHHFPFAAWAE*PLIAGDAMIISALV
Trigger: AACCAGAGCACTGATGATCATGGCATCACCAGCTATGAGTGGTCACTCAGCCCAAGCAGCAAAGGGAAAGTGGTGGAGATGCAGGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325722.8
ENST00000426982.6
ENST00000440579.5
ENST00000485551.5
CDS-3UTR CAA 90 bp GATTCAAGTCCCAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGAATGATCTCCACCAGGTaGTTTTTCCTGGGATCAGGT +
Preference number: 5 (lower is better)
Translates to: DSSPRGSGWDCQGEMTSRMISTR*FFLGSG
Trigger: ACCTGATCCCAGGAAAAACAACCTGGTGGAGATCAT...TCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTGGGACTTGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCTTCCGCAGCTCACTCTaGAGCATCGCTGCCACCTCA +
Preference number: 5 (lower is better)
Translates to: PDRFKEETSSFTASLRGSFRSSL*SIAATS
Trigger: TGAGGTGGCAGCGATGCTCAAGAGTGAGCTGCGGAA...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGCAAAAAGTCTGCCTTTaGCTTCCGCAGCTCACTCTT +
Preference number: 5 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRQKVCL*LPQLTL
Trigger: AAGAGTGAGCTGCGGAAGCAAAAGGCAGACTTTTTG...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp CAGCAGGCCTCACCTTGCAGCACTCTGGGCACAATGACACTGTCCACTGGGGAGCTTGGGTTTTCCTTTTaGCCTCTTACAACAACAGAT +
Preference number: 5 (lower is better)
Translates to: QQASPCSTLGTMTLSTGELGFSF*PLTTTD
Trigger: ATCTGTTGTTGTAAGAGGCAAAAAGGAAAACCCAAG...CTCCCCAGTGGACAGTGTCATTGTGCCCAGAGTGCTGCAAGGTGAGGCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS TCA 90 bp CAGTCACTTGAGCAGTGGCCTGCTGTCCTATTGTGTCAGTCACTGTaGGCTGGTAAGTGTAGTCTCCTTCTTGCATCGCAGAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: QSLEQWPAVLLCQSL*AGKCSLLLASQRAV
Trigger: TACAGCTCTCTGCGATGCAAGAAGGAGACTACACTTACCAGCTCACAGTGACTGACACAATAGGACAGCAGGCCACTGCTCAAGTGACTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000440579.5
ENST00000467109.1
ENST00000485551.5
CDS TCA 90 bp CGTTTGGTGAACGAGTCACAGTGGCCATGGTCGGAACAGTTCAGCTaGCATGCTGAGAGTGGCAGCAAAGGGAAGAAAGTCAACAAGACT +
Preference number: 5 (lower is better)
Translates to: RLVNESQWPWSEQFS*HAESGSKGKKVNKT
Trigger: AGTCTTGTTGACTTTCTTCCCTTTGCTGCCACTCTCAGCATGTCAGCTGAACTGTTCCGACCATGGCCACTGTGACTCGTTCACCAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473423.1
CDS TCA 90 bp CATCCATTGAGCCTTGGGTCACTCACCCCTTACTCTGTGGGAAGGTaGACCTGTCCATCATGTCACCTTCTTCTACCTCCTCAAATGCTC +
Preference number: 5 (lower is better)
Translates to: HPLSLGSLTPYSVGR*TCPSCHLLLPPQML
Trigger: GAGCATTTGAGGAGGTAGAAGAAGGTGACATGATGGACAGGTTCACCTTCCCACAGAGTAAGGGGTGAGTGACCCAAGGCTCAATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS GCA 90 bp GGCCATGTAAAGATGGCATCATCGCTGTCCAGCTCTGACTCGGAGTaGATCAGGCTGCTACTTAGCAAAAGGCCTTTCTGTTTGATGCCT +
Preference number: 5 (lower is better)
Translates to: GHVKMASSLSSSDSE*IRLLLSKRPFCLMP
Trigger: AGGCATCAAACAGAAAGGCCTTTTGCTAAGTAGCAGCCTGATGCACTCCGAGTCAGAGCTGGACAGCGATGATGCCATCTTTACATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
CDS-3UTR CAA 90 bp ACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTCCTGGAACTGAGGCAGGCCAACTCCAAATaGTGTCTTCCCCTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: TAINDCRSGWQRDLLELRQANSK*CLPLLA
Trigger: TGCCAGCAGGGGAAGACACAATTTGGAGTTGGCCTG...CCTCAGTTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CAA 90 bp AGCATAACTGTAGGAGGGAGCCACTGGCTGGGGGACAGCAATCTGGGTTTTCTCCCCTCTACAATCACTTaGAATTCATACAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: SITVGGSHWLGDSNLGFLPSTIT*NSYRPG
Trigger: TCCAGGCCTGTATGAATTCAAAGTGATTGTAGAGGG...GAGAAAACCCAGATTGCTGTCCCCCAGCCAGTGGCTCCCTCCTACAGTTATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR CAA 90 bp AGAGGCCACCCGCCATCCCTGACACAGTCAATCCTCCCTAATCTCGGGCCGGATCTTATTGTTTTCAGGTaGCACAATAACAGTCACTTG +
Preference number: 5 (lower is better)
Translates to: RGHPPSLTQSILPNLGPDLIVFR*HNNSHL
Trigger: CAAGTGACTGTTATTGTGCAACCTGAAAACAATAAG...ATCCGGCCCGAGATTAGGGAGGATTGACTGTGTCAGGGATGGCGGGTGGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp CAGGGGTTCTGGTTGGGACTGTCAGGGCGAAATGACCAGCAGATGCTGGGACAGCTTGGGTTTTCCTTTTaGCCTCTTACAACAACAGAT +
Preference number: 5 (lower is better)
Translates to: QGFWLGLSGRNDQQMLGQLGFSF*PLTTTD
Trigger: ATCTGTTGTTGTAAGAGGCAAAAAGGAAAACCCAAG...CTGTCCCAGCATCTGCTGGTCATTTCGCCCTGACAGTCCCAACCAGAACCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS GCA 90 bp ACAGTGTTGACTTCCAAGGCTCTGAATATCAAAAAGTCTGCCTTTTaGTTCCGCAGCTCACTCTTGAGCATCGCTGCCACCTCATGGCCT +
Preference number: 5 (lower is better)
Translates to: TVLTSKALNIKKSAF*FRSSLLSIAATSWP
Trigger: AGGCCATGAGGTGGCAGCGATGCTCAAGAGTGAGCTGCGGAAGCAAAAGGCAGACTTTTTGATATTCAGAGCCTTGGAAGTCAACACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000474856.1
ENST00000485551.5
CDS GCA 90 bp CTCACTGACAGTGTTGACTTCCAAGGCTCTGAATATCAAAAAGTCTaGCTTTTGCTTCCGCAGCTCACTCTTGAGCATCGCTGCCACCTC +
Preference number: 5 (lower is better)
Translates to: LTDSVDFQGSEYQKV*LLLPQLTLEHRCHL
Trigger: GAGGTGGCAGCGATGCTCAAGAGTGAGCTGCGGAAGCAAAAGGCAGACTTTTTGATATTCAGAGCCTTGGAAGTCAACACTGTCAGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474856.1
CDS GCA 90 bp CTTCTAGCAGCTGGGTCTGCACCAGTTTTGTTCCTTTGCCTGGAATaGTATTTCCTGCAGCTTTATCTGGCTAGCTCCCACTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: LLAAGSAPVLFLCLE*YFLQLYLASSHLSR
Trigger: CCTGGATAAGTGGGAGCTAGCCAGATAAAGCTGCAGGAAATAGCATTCCAGGCAAAGGAACAAAACTGGTGCAGACCCAGCTGCTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS-3UTR CAA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCCACAATAACAGTCACTaGAGCAGTGGCCTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: PDRFKEETSSFTASLRGSHNNSH*SSGLLS
Trigger: GGACAGCAGGCCACTGCTCAAGTGACTGTTATTGTG...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS TCA 90 bp ATGAGACAGCGAGAGAAATGCCGACCCAGGCATGTGAGAGAAAGGTaGGCACAACTTGAGGAGGTTAAGGGAGGGATAAGAAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: MRQREKCRPRHVRER*AQLEEVKGGIRKSF
Trigger: AAAGCTCTTTCTTATCCCTCCCTTAACCTCCTCAAGTTGTGCTCACCTTTCTCTCACATGCCTGGGTCGGCATTTCTCTCGCTGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS GCA 90 bp ACATGTGACAGTGTTGACTTCCAAGGCTCTGAATATCAAAAAGTCTaGCTTTTGCTTCCGCAGCTCACTCTTGAGCATCGCTGCCACCTC +
Preference number: 5 (lower is better)
Translates to: TCDSVDFQGSEYQKV*LLLPQLTLEHRCHL
Trigger: GAGGTGGCAGCGATGCTCAAGAGTGAGCTGCGGAAGCAAAAGGCAGACTTTTTGATATTCAGAGCCTTGGAAGTCAACACTGTCACATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000485551.5
CDS GCA 90 bp CACAGGAGAGAGCACAAGGAGAGTCAGCTAATGCTCTTCACTAACTaGAACTACTGTCAGTTGGACACAACCACTATGAGACCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: HRREHKESQLMLFTN*NYCQLDTTTMRPEA
Trigger: GGCTTCTGGTCTCATAGTGGTTGTGTCCAACTGACAGTAGTTGCAGTTAGTGAAGAGCATTAGCTGACTCTCCTTGTGCTCTCTCCTGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473465.1
CDS GCA 90 bp CTGGGTCTGCACCAGTTTTGTTCCTTTGCCTGGAATGCTATTTCCTaGAGCTTTATCTGGCTAGCTCCCACTTATCCAGGTCTCAGCTTA +
Preference number: 5 (lower is better)
Translates to: LGLHQFCSFAWNAIS*SFIWLAPTYPGLSL
Trigger: TAAGCTGAGACCTGGATAAGTGGGAGCTAGCCAGATAAAGCTGCAGGAAATAGCATTCCAGGCAAAGGAACAAAACTGGTGCAGACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CCA 90 bp CACCTTCTTCTACCTCCTCAAATGCTCTCTGCTCCTTCTAGCAGCTaGGTCTGCACCAGTTTTGTTCCTTTGCCTGGAATGCTATTTCCT +
Preference number: 5 (lower is better)
Translates to: HLLLPPQMLSAPSSS*VCTSFVPLPGMLFP
Trigger: AGGAAATAGCATTCCAGGCAAAGGAACAAAACTGGTGCAGACCCAGCTGCTAGAAGGAGCAGAGAGCATTTGAGGAGGTAGAAGAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS-3UTR CAA 90 bp TTGAACTTCATTCTTAGGCAGGGTTATCTGGACACTCTCTCCAGCAGATACCACGCACTGATACATTCTTaGGCCCACCAGACAGCTCTG +
Preference number: 5 (lower is better)
Translates to: LNFILRQGYLDTLSSRYHALIHS*AHQTAL
Trigger: CAGAGCTGTCTGGTGGGCCAAAGAATGTATCAGTGC...GTGGTATCTGCTGGAGAGAGTGTCCAGATAACCCTGCCTAAGAATGAAGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS TCA 90 bp CAGAAGCCAAAGAGTTCCTGGAATCCCGCCAGAGGTTATCAATTTTaGCTTCCTTCATTTCACCTTTGTGCTCACTGCAGCCACTACAGG +
Preference number: 5 (lower is better)
Translates to: QKPKSSWNPARGYQF*LPSFHLCAHCSHYR
Trigger: CCTGTAGTGGCTGCAGTGAGCACAAAGGTGAAATGAAGGAAGTCAAAATTGATAACCTCTGGCGGGATTCCAGGAACTCTTTGGCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473465.1
CDS TCA 90 bp TGCTCTTCACTAACTGCAACTACTGTCAGTTGGACACAACCACTATaGGACCAGAAGCCAAAGAGTTCCTGGAATCCCGCCAGAGGTTAT +
Preference number: 5 (lower is better)
Translates to: CSSLTATTVSWTQPL*DQKPKSSWNPARGY
Trigger: ATAACCTCTGGCGGGATTCCAGGAACTCTTTGGCTTCTGGTCTCATAGTGGTTGTGTCCAACTGACAGTAGTTGCAGTTAGTGAAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473465.1
CDS GCA 90 bp CCTATAGTAAGTGTTGACTTCCAAGGCTCTGAATATCAAAAAGTCTaGCTTTTGCTTCCGCAGCTCACTCTTGAGCATCGCTGCCACCTC +
Preference number: 5 (lower is better)
Translates to: PIVSVDFQGSEYQKV*LLLPQLTLEHRCHL
Trigger: GAGGTGGCAGCGATGCTCAAGAGTGAGCTGCGGAAGCAAAAGGCAGACTTTTTGATATTCAGAGCCTTGGAAGTCAACACTTACTATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473844.1
CDS-3UTR CAA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCGAAGCAGGATTTGGCTaGACTCCCAGCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGEAGFG*TPSLFS
Trigger: GGAGAAGAGGCTGGGAGTCAAGCCAAATCCTGCTTC...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CAA 90 bp TTCACAGCTTCGTTGAGGGGTTCCTGGAGGACGTCTCTGGATTCAAGTCCCAGGCTTATTGTTTTCAGGTaGCACAATAACAGTCACTTG +
Preference number: 5 (lower is better)
Translates to: FTASLRGSWRTSLDSSPRLIVFR*HNNSHL
Trigger: CAAGTGACTGTTATTGTGCAACCTGAAAACAATAAG...CCTGGGACTTGAATCCAGAGACGTCCTCCAGGAACCCCTCAACGAAGCTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS TCA 90 bp TGTGTCACTATAGGTGTAACTACGTCACTGGGACTACCTCTCTTCTaGAGCTTCCTGATTAAGCTCTGCTGGTCACTGGAAGATACAGCA +
Preference number: 5 (lower is better)
Translates to: CVTIGVTTSLGLPLF*SFLIKLCWSLEDTA
Trigger: TGCTGTATCTTCCAGTGACCAGCAGAGCTTAATCAGGAAGCTTCAGAAGAGAGGTAGTCCCAGTGACGTAGTTACACCTATAGTGACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325722.8
ENST00000426982.6
ENST00000431916.5
ENST00000440579.5
ENST00000469892.5
ENST00000478463.6
ENST00000482929.6
ENST00000492888.1
CDS GCA 90 bp ACATATAACACGCTCCACTCACAGTTGCTGTCTCCATCCCTCAGCTaGACCTTGATGAAATTCTCCATCCAAAAAGGGTCACAGATACAG +
Preference number: 5 (lower is better)
Translates to: TYNTLHSQLLSPSLS*TLMKFSIQKGSQIQ
Trigger: CTGTATCTGTGACCCTTTTTGGATGGAGAATTTCATCAAGGTGCAGCTGAGGGATGGAGACAGCAACTGTGAGTGGAGCGTGTTATATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000461312.5
ENST00000473423.1
ENST00000485551.5
CDS CCA 90 bp CCTGGGGTCTCCTGCTGGTTCTTCATCTCCAGTATCCATGAGCTTTaGTTCAGGCCACTCAGTGACATTCTCTTTTCTTTACCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: PGVSCWFFISSIHEL*FRPLSDILFSLPFK
Trigger: TTTGAAAGGTAAAGAAAAGAGAATGTCACTGAGTGGCCTGAACCAAAGCTCATGGATACTGGAGATGAAGAACCAGCAGGAGACCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461312.5
CDS-3UTR CAA 90 bp ACTGCCATCAATGACTGTAGAAGTGGTTGGCAAAGAGATCTCCTGGAACTGAGGAACACCAGCATGGAATaGGAGGAGTGTGTCCTAAAA +
Preference number: 5 (lower is better)
Translates to: TAINDCRSGWQRDLLELRNTSME*EECVLK
Trigger: TTTTAGGACACACTCCTCCAATTCCATGCTGGTGTT...CCTCAGTTCCAGGAGATCTCTTTGCCAACCACTTCTACAGTCATTGATGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CAA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCCTCAGAACTTTTTACTaGTTGAGTGCTGGGCGTAGT +
Preference number: 5 (lower is better)
Translates to: PDRFKEETSSFTASLRGSLRTFY*LSAGRS
Trigger: ACTACGCCCAGCACTCAACAAGTAAAAAGTTCTGAG...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp AACTTCATTCTTAGGCAGGGTTATCTGGACACTCTCTCCAGCAGATACCACCAGGTGAGCTTCGATAGTTaGAGGATCTGGGAATGTTTC +
Preference number: 5 (lower is better)
Translates to: NFILRQGYLDTLSSRYHQVSFDS*RIWECF
Trigger: GAAACATTCCCAGATCCTCAAACTATCGAAGCTCAC...CTGGTGGTATCTGCTGGAGAGAGTGTCCAGATAACCCTGCCTAAGAATGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR CAA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCCCCTCTACAATCACTTaGAATTCATACAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: PDRFKEETSSFTASLRGSPSTIT*NSYRPG
Trigger: TCCAGGCCTGTATGAATTCAAAGTGATTGTAGAGGG...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCTTTGCAGTAGTAGAGTaGGTAGCTCCATCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: PDRFKEETSSFTASLRGSFAVVE*VAPSES
Trigger: AGACTCTGATGGAGCTACCAACTCTACTACTGCAAA...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp CCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGGGTTCCGTACGGCTGAATCTTTaGCACAATGATGTCGGAATC +
Preference number: 5 (lower is better)
Translates to: PDRFKEETSSFTASLRGSVRLNL*HNDVGI
Trigger: GATTCCGACATCATTGTGCAAAAGATTCAGCCGTAC...GGAACCCCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS-3UTR CAA 90 bp GGCCCACCAGACAGGTTTAAAGAGGAAACCTCTTCATTCACAGCTTCGTTGAGGTCCAGGATCTTGTACTaGCTTTTCCTCTTGGGTTTT +
Preference number: 5 (lower is better)
Translates to: GPPDRFKEETSSFTASLRSRILY*LFLLGF
Trigger: AAAACCCAAGAGGAAAAGCAAGTACAAGATCCTGGA...CCTCAACGAAGCTGTGAATGAAGAGGTTTCCTCTTTAAACCTGTCTGGTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS GCA 90 bp CTGGTAGTCAGACCACCTAATTCGTTGGAGTCATTCACTTTAGAATaGTGTGTCACTATAGGTGTAACTACGTCACTGGGACTACCTCTC +
Preference number: 5 (lower is better)
Translates to: LVVRPPNSLESFTLE*CVTIGVTTSLGLPL
Trigger: GAGAGGTAGTCCCAGTGACGTAGTTACACCTATAGTGACACAGCATTCTAAAGTGAATGACTCCAACGAATTAGGTGGTCTGACTACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325722.8
ENST00000426982.6
ENST00000431916.5
ENST00000440579.5
ENST00000469892.5
ENST00000478463.6
ENST00000482929.6
ENST00000492888.1
CDS-3UTR CAA 90 bp CTTCCCAATGGTACTGAACGATTTTATCATCATCAGTGGACTGCCATCAATGACGAAATTGTAATCGCCTaGTGGACCTCTGCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: LPNGTERFYHHQWTAINDEIVIA*WTSAEP
Trigger: TGGCTCTGCAGAGGTCCACAAGGCGATTACAATTTC...GTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTCAGTACCATTGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CAA 90 bp ATGAGTAATCAGCTGCCAGTCGTAGGTGTAGGTTTCTCCTTTAGGTGGTTCTTGCTCAGAACTTTTTACTaGTTGAGTGCTGGGCGTAGT +
Preference number: 5 (lower is better)
Translates to: MSNQLPVVGVGFSFRWFLLRTFY*LSAGRS
Trigger: ACTACGCCCAGCACTCAACAAGTAAAAAGTTCTGAG...CAAGAACCACCTAAAGGAGAAACCTACACCTACGACTGGCAGCTGATTACTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS-3UTR CAA 90 bp ATGAGTAATCAGCTGCCAGTCGTAGGTGTAGGTTTCTCCTTTAGGTGGTTCTTGTTCCCCATGGGCATTTaGACCCTCTACAATCACTTT +
Preference number: 5 (lower is better)
Translates to: MSNQLPVVGVGFSFRWFLFPMGI*TLYNHF
Trigger: AAAGTGATTGTAGAGGGTCAAAATGCCCATGGGGAA...CAAGAACCACCTAAAGGAGAAACCTACACCTACGACTGGCAGCTGATTACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS GCA 90 bp GGAAAGAGTACCAGCCCGCAGACAAGAAGATCTCTGAGTTTTAGTTaGAGTTCTGCTACTAACAGCTTTGTGACTTTGACCAAACACACT +
Preference number: 5 (lower is better)
Translates to: GKSTSPQTRRSLSFS*SSATNSFVTLTKHT
Trigger: AGTGTGTTTGGTCAAAGTCACAAAGCTGTTAGTAGCAGAACTGCAACTAAAACTCAGAGATCTTCTTGTCTGCGGGCTGGTACTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494948.1
CDS-3UTR CAA 90 bp CTTCCCAATGGTACTGAACGATTTTATCATCATCAGTGGACTGCCATCAATGACAGAACTTTTTACTTGTaGAGTGCTGGGCGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: LPNGTERFYHHQWTAINDRTFYL*SAGRSS
Trigger: GCTACTACGCCCAGCACTCAACAAGTAAAAAGTTCT...GTCATTGATGGCAGTCCACTGATGATGATAAAATCGTTCAGTACCATTGGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CAA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCCTCAGAACTTTTTACTaGTTGAGTGCTGGGCGTAGT +
Preference number: 5 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGLRTFY*LSAGRS
Trigger: ACTACGCCCAGCACTCAACAAGTAAAAAGTTCTGAG...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CAA 90 bp AACGATTTTATCATCATCAGTGGACTGCCATCAATGACTGTAGAAGTGGTTGGCTTCCCCATGGGCATTTaGACCCTCTACAATCACTTT +
Preference number: 5 (lower is better)
Translates to: NDFIIISGLPSMTVEVVGFPMGI*TLYNHF
Trigger: AAAGTGATTGTAGAGGGTCAAAATGCCCATGGGGAA...GCCAACCACTTCTACAGTCATTGATGGCAGTCCACTGATGATGATAAAATCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS-3UTR CAA 90 bp ACCATGTTTAATCATCCCACAATGGACAGTAGTGCAGTAGTAGAAATTATAAGTTCACAGATACAGCGTTaGGTGAACGAGTCACAGTGG +
Preference number: 5 (lower is better)
Translates to: TMFNHPTMDSSAVVEIISSQIQR*VNESQW
Trigger: CCACTGTGACTCGTTCACCAAACGCTGTATCTGTGA...ACTTATAATTTCTACTACTGCACTACTGTCCATTGTGGGATGATTAAACATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS-3UTR CAA 90 bp ACCATGTTTAATCATCCCACAATGGACAGTAGTGCAGTAGTAGAAATTATAAGTCAAAAAGTCTGCCTTTaGCTTCCGCAGCTCACTCTT +
Preference number: 5 (lower is better)
Translates to: TMFNHPTMDSSAVVEIISQKVCL*LPQLTL
Trigger: AAGAGTGAGCTGCGGAAGCAAAAGGCAGACTTTTTG...ACTTATAATTTCTACTACTGCACTACTGTCCATTGTGGGATGATTAAACATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000325722.8
CDS CCA 72 bp CGTGAGCAGCGGCCCGAGGCTCCCGGAGCATCGCGCTaGGAGAAGACTTCGCCGCTCGGGGCCGCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: REQRPEAPGASR*EKTSPLGAAAW
Trigger: CCAGGCTGCGGCCCCGAGCGGCGAAGTCTTCTCCCAGCGCGATGCTCCGGGAGCCTCGGGCCGCTGCTCACG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS TCA 72 bp TGCAGCAGCCTGGAGCCAGGAGTGGGCAACGCGGCGTaGGCAGCGGCCCGAGGCTCCCGGAGCATCGCGCTG +
Preference number: 6 (lower is better)
Translates to: CSSLEPGVGNAA*AAARGSRSIAL
Trigger: CAGCGCGATGCTCCGGGAGCCTCGGGCCGCTGCTCACGCCGCGTTGCCCACTCCTGGCTCCAGGCTGCTGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS GCA 72 bp CTCTCGCCGCCCGCTCTCCAGAGGCAGTCTGCACCTTaGCTCCTTCGCTCGAGCCCCAGCCCCCAGACTCGG +
Preference number: 6 (lower is better)
Translates to: LSPPALQRQSAP*LLRSSPSPQTR
Trigger: CCGAGTCTGGGGGCTGGGGCTCGAGCGAAGGAGGCAAGGTGCAGACTGCCTCTGGAGAGCGGGCGGCGAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426982.6
CDS CAA 72 bp CCTCTCGCCGCCCGCTCTCCAGAGGCAGTCTGCACCTaGCCTCCTTCGCTCGAGCCCCAGCCCCCAGACTCG +
Preference number: 6 (lower is better)
Translates to: PLAARSPEAVCT*PPSLEPQPPDS
Trigger: CGAGTCTGGGGGCTGGGGCTCGAGCGAAGGAGGCAAGGTGCAGACTGCCTCTGGAGAGCGGGCGGCGAGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426982.6
CDS CCA 72 bp GACCAGGTGGCTACAGGATCTCCTCCCGCGGGCTCCTaGCCTTCAGAGGGGTCTGCCCGTTGGGTACAGAGC +
Preference number: 6 (lower is better)
Translates to: DQVATGSPPAGS*PSEGSARWVQS
Trigger: GCTCTGTACCCAACGGGCAGACCCCTCTGAAGGCCAGGAGCCCGCGGGAGGAGATCCTGTAGCCACCTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS CCA 72 bp CTGGCACCTGCTCTCACTGGCATAAGCGAAGGAATCTaGGCCCCCAGCCTCTCGCCGCCCGCTCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: LAPALTGISEGI*APSLSPPALQR
Trigger: CCTCTGGAGAGCGGGCGGCGAGAGGCTGGGGGCCCAGATTCCTTCGCTTATGCCAGTGAGAGCAGGTGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492888.1
CDS CCA 72 bp GCTCTGGCACCCAGGGCCCCTACCTGCTCGGGAGGTTaGCTTCAGCTCCAGGCTTTCCTGATCCGTGGCATC +
Preference number: 6 (lower is better)
Translates to: ALAPRAPTCSGG*LQLQAFLIRGI
Trigger: GATGCCACGGATCAGGAAAGCCTGGAGCTGAAGCCAACCTCCCGAGCAGGTAGGGGCCCTGGGTGCCAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS TCA 72 bp CAGGCAGAACCAGTACACATTGGCCAGAGCCCGGAGTaGAGCAGCCGCGGATTCGTCAAGAGCGGTGCGGGG +
Preference number: 6 (lower is better)
Translates to: QAEPVHIGQSPE*SSRGFVKSGAG
Trigger: CCCCGCACCGCTCTTGACGAATCCGCGGCTGCTTCACTCCGGGCTCTGGCCAATGTGTACTGGTTCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482929.6
CDS CCA 72 bp CCCGCGGGCTCCTGGCCTTCAGAGGGGTCTGCCCGTTaGGTACAGAGCCATTCTGACCATGCAGGAGTTTGC +
Preference number: 6 (lower is better)
Translates to: PAGSWPSEGSAR*VQSHSDHAGVC
Trigger: GCAAACTCCTGCATGGTCAGAATGGCTCTGTACCCAACGGGCAGACCCCTCTGAAGGCCAGGAGCCCGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS CCA 72 bp TCCAGACAGGCAGAACCAGTACAAAGCGAAGGAATCTaGGCCCCCAGCCTCTCGCCGCCCGCTCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: SRQAEPVQSEGI*APSLSPPALQR
Trigger: CCTCTGGAGAGCGGGCGGCGAGAGGCTGGGGGCCCAGATTCCTTCGCTTTGTACTGGTTCTGCCTGTCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426982.6
ENST00000476329.1
CDS CAA 72 bp AGCTCTGGCACCCAGGGCCCCTACCTGCTCGGGAGGTaGGCTTCAGCTCCAGGCTTTCCTGATCCGTGGCAT +
Preference number: 6 (lower is better)
Translates to: SSGTQGPYLLGR*ASAPGFPDPWH
Trigger: ATGCCACGGATCAGGAAAGCCTGGAGCTGAAGCCAACCTCCCGAGCAGGTAGGGGCCCTGGGTGCCAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CAA 90 bp AGACCTAGAAGCTCTGGCACCCAGGGCCCCTACCTGCTCGGGAGGTaGGCTTCAGCTCCAGGCTTTCCTGATCCGTGGCATCCAGGATCT +
Preference number: 6 (lower is better)
Translates to: RPRSSGTQGPYLLGR*ASAPGFPDPWHPGS
Trigger: AGATCCTGGATGCCACGGATCAGGAAAGCCTGGAGCTGAAGCCAACCTCCCGAGCAGGTAGGGGCCCTGGGTGCCAGAGCTTCTAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CCA 72 bp CCTTCTAGCCACCAAAAGACATGGCAGGCAGAGTCCTaGCAGCAGGCAGCCCAACATGACTGGAGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: PSSHQKTWQAES*QQAAQHDWREG
Trigger: CCCCTCTCTCCAGTCATGTTGGGCTGCCTGCTGCCAGGACTCTGCCTGCCATGTCTTTTGGTGGCTAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000325722.8
ENST00000426982.6
ENST00000440579.5
ENST00000469892.5
ENST00000478463.6
ENST00000482929.6
ENST00000492888.1
ENST00000494948.1
CDS CAA 90 bp CCCCGCCAAGCGGAAGTAGCACGCGAAGTGGGTCCTGGAGGCATTTaGTCCAGTGCAGCTCAGGGCAAATCTGACCCTCAGTCTTCATCA +
Preference number: 6 (lower is better)
Translates to: PRQAEVAREVGPGGI*SSAAQGKSDPQSSS
Trigger: TGATGAAGACTGAGGGTCAGATTTGCCCTGAGCTGCACTGGACAAAATGCCTCCAGGACCCACTTCGCGTGCTACTTCCGCTTGGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS TCA 72 bp TTCAGAGGGGTCTGCCCGTTGGGTACAGAGCCATTCTaGCCATGCAGGAGTTTGCCCTTCTCTCGGTCTGGC +
Preference number: 6 (lower is better)
Translates to: FRGVCPLGTEPF*PCRSLPFSRSG
Trigger: GCCAGACCGAGAGAAGGGCAAACTCCTGCATGGTCAGAATGGCTCTGTACCCAACGGGCAGACCCCTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS GCA 72 bp GGCCAACTCCAAATTGTGTCTTCCCCTGCTGGCACCTaGTCTCACTGGCATAAGCGAAGGAATCTGGGCCCC +
Preference number: 6 (lower is better)
Translates to: GQLQIVSSPAGT*SHWHKRRNLGP
Trigger: GGGGCCCAGATTCCTTCGCTTATGCCAGTGAGAGCAGGTGCCAGCAGGGGAAGACACAATTTGGAGTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492888.1
CDS TCA 72 bp GCCTGGCACATAGTGGTCCCGCTCCATATCCACAGATaGATGAGACAGCCCCTGCCCTCAGGGATTTCACTG +
Preference number: 6 (lower is better)
Translates to: AWHIVVPLHIHR*MRQPLPSGISL
Trigger: CAGTGAAATCCCTGAGGGCAGGGGCTGTCTCATTCATCTGTGGATATGGAGCGGGACCACTATGTGCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CCA 72 bp AGTCCAAGGTCCCTGACCCTGACTACCTGGGGCAGTTaGAAAAGCGGAACTCCAGGTGGGAAACATGAGGAG +
Preference number: 6 (lower is better)
Translates to: SPRSLTLTTWGS*KSGTPGGKHEE
Trigger: CTCCTCATGTTTCCCACCTGGAGTTCCGCTTTTCCAACTGCCCCAGGTAGTCAGGGTCAGGGACCTTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CCA 72 bp CACATTTCACCTCCAGGCCCTCATTCTCAATATTCCTaGGTGAAATGCCCCGCCCGCCCTCACTGCTCTGGT +
Preference number: 6 (lower is better)
Translates to: HISPPGPHSQYS*VKCPARPHCSG
Trigger: ACCAGAGCAGTGAGGGCGGGCGGGGCATTTCACCCAGGAATATTGAGAATGAGGGCCTGGAGGTGAAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CAA 90 bp ACCACCTCCAGTCTCCACCTTGACAGTGTTGGTGGATCGAGCTGCTaGGTGCAGAGTCCAGACTGCTGTGAGCCTGTTCTCTTCTGCTAC +
Preference number: 6 (lower is better)
Translates to: TTSSLHLDSVGGSSC*VQSPDCCEPVLFCY
Trigger: GTAGCAGAAGAGAACAGGCTCACAGCAGTCTGGACTCTGCACCAAGCAGCTCGATCCACCAACACTGTCAAGGTGGAGACTGGAGGTGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS TCA 72 bp CCTGCTCGGGAGGTTGGCTTCAGCTCCAGGCTTTCCTaGTCCGTGGCATCCAGGATCTTGTACTTGCTTTTC +
Preference number: 6 (lower is better)
Translates to: PAREVGFSSRLS*SVASRILYLLF
Trigger: GAAAAGCAAGTACAAGATCCTGGATGCCACGGATCAGGAAAGCCTGGAGCTGAAGCCAACCTCCCGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000485551.5
CDS TCA 72 bp GCTGCTCGGGAGGTTGGCTTCAGCTCCAGGCTTTCCTaGTCCGTGGCATCCAGGATCTTGTACTTGCTTTTC +
Preference number: 6 (lower is better)
Translates to: AAREVGFSSRLS*SVASRILYLLF
Trigger: GAAAAGCAAGTACAAGATCCTGGATGCCACGGATCAGGAAAGCCTGGAGCTGAAGCCAACCTCCCGAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461312.5
CDS TCA 72 bp GAGGGCACCAAAGCACCCCAGATTAATGCTATGTGGTaGAATGTCCTCGAGACCCACCTTGGGCATGGTGCC +
Preference number: 6 (lower is better)
Translates to: EGTKAPQINAMW*NVLETHLGHGA
Trigger: GGCACCATGCCCAAGGTGGGTCTCGAGGACATTTCACCACATAGCATTAATCTGGGGTGCTTTGGTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473423.1
CDS TCA 72 bp CAGCCCAGCGGAGGAAGGAAGGCCTACTACCTGCCCTaGTCTCCCAGTGCCATCACTCAAAGTCATCTTACT +
Preference number: 6 (lower is better)
Translates to: QPSGGRKAYYLP*SPSAITQSHLT
Trigger: AGTAAGATGACTTTGAGTGATGGCACTGGGAGATCAGGGCAGGTAGTAGGCCTTCCTTCCTCCGCTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS GCA 72 bp GGCCAACTCCAAATTGTGTCTTCCCCTGCTGGCACCTaGTCTCACTGGCATCTGTTGACAACCACAGAACGC +
Preference number: 6 (lower is better)
Translates to: GQLQIVSSPAGT*SHWHLLTTTER
Trigger: GCGTTCTGTGGTTGTCAACAGATGCCAGTGAGAGCAGGTGCCAGCAGGGGAAGACACAATTTGGAGTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325722.8
ENST00000426982.6
ENST00000440579.5
ENST00000469892.5
ENST00000478463.6
ENST00000482929.6
ENST00000494948.1
CDS GCA 72 bp TCCAGTCTCCACCTTGACAGTGTTGGTGGATCGAGCTaGTTGGTGCAGAGTCCAGACTGCTGTGAGCCTGTT +
Preference number: 6 (lower is better)
Translates to: SSLHLDSVGGSS*LVQSPDCCEPV
Trigger: AACAGGCTCACAGCAGTCTGGACTCTGCACCAAGCAGCTCGATCCACCAACACTGTCAAGGTGGAGACTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CAA 72 bp AGTCTCCACCTTGACAGTGTTGGTGGATCGAGCTGCTaGGTGCAGAGTCCAGACTGCTGTGAGCCTGTTCTC +
Preference number: 6 (lower is better)
Translates to: SLHLDSVGGSSC*VQSPDCCEPVL
Trigger: GAGAACAGGCTCACAGCAGTCTGGACTCTGCACCAAGCAGCTCGATCCACCAACACTGTCAAGGTGGAGACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS TCA 72 bp GCAAAGGGAAGAAAGTCAACAAGACTCAGCCAGGGGTaGCAAGCAGCACCTAGAGCCCATGAGGGCACCAAA +
Preference number: 6 (lower is better)
Translates to: AKGRKSTRLSQG*QAAPRAHEGTK
Trigger: TTTGGTGCCCTCATGGGCTCTAGGTGCTGCTTGTCACCCCTGGCTGAGTCTTGTTGACTTTCTTCCCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473423.1
CDS GCA 72 bp CCAGATCTCAGGCCAACTCCAAATTGTGTCTTCCCCTaGTGGCACCTGCTCTCACTGGCATCTGTTGACAAC +
Preference number: 6 (lower is better)
Translates to: PDLRPTPNCVFP*WHLLSLASVDN
Trigger: GTTGTCAACAGATGCCAGTGAGAGCAGGTGCCAGCAGGGGAAGACACAATTTGGAGTTGGCCTGAGATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000325722.8
ENST00000426982.6
ENST00000440579.5
ENST00000469892.5
ENST00000478463.6
ENST00000482929.6
ENST00000494948.1
CDS GCA 72 bp TCCACCTTGACAGTGTTGGTGGATCGAGCTGCTTGGTaGAGAGTCCAGACTGCTGTGAGCCTGTTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: STLTVLVDRAAW*RVQTAVSLFSS
Trigger: AGAAGAGAACAGGCTCACAGCAGTCTGGACTCTGCACCAAGCAGCTCGATCCACCAACACTGTCAAGGTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CCA 72 bp GGGAGGTTGGCTTCAGCTCCAGGCTTTCCTGATCCGTaGCATCCAGGATCTTGTACTTGCTTTTCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: GRLASAPGFPDP*HPGSCTCFSSW
Trigger: CCAAGAGGAAAAGCAAGTACAAGATCCTGGATGCCACGGATCAGGAAAGCCTGGAGCTGAAGCCAACCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000461312.5
ENST00000485551.5
CDS CCA 72 bp CATGTAGACATTTGCTCTGTGGGCTCTTGTCTGCTGTaGCTTCACTGGATGCTGCTCGGGAGGTTGGCTTCA +
Preference number: 6 (lower is better)
Translates to: HVDICSVGSCLL*LHWMLLGRLAS
Trigger: TGAAGCCAACCTCCCGAGCAGCATCCAGTGAAGCCACAGCAGACAAGAGCCCACAGAGCAAATGTCTACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461312.5
CDS CAA 90 bp GAATCCCGCCAGAGGTTATCAATTTTGACTTCCTTCATTTCACCTTaGTGCTCACTGCAGCCACTACAGGACCCTCGGGGCTCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: ESRQRLSILTSFISP*CSLQPLQDPRGSGP
Trigger: TGGCCCTGAGCCCCGAGGGTCCTGTAGTGGCTGCAGTGAGCACAAAGGTGAAATGAAGGAAGTCAAAATTGATAACCTCTGGCGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473465.1
CDS TCA 72 bp TCGAGTCCAGAGGTAGCTGACTATTCCCTTGTCATCTaGGGACTTAGAGCCATCCAGCTCTGCTGTGCTCGT +
Preference number: 6 (lower is better)
Translates to: SSPEVADYSLVI*GLRAIQLCCAR
Trigger: ACGAGCACAGCAGAGCTGGATGGCTCTAAGTCCTCAGATGACAAGGGAATAGTCAGCTACCTCTGGACTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000485551.5
ENST00000492544.1
CDS TCA 72 bp AACGAGTCACAGTGGCCATGGTCGGAACAGTTCAGCTaGCATGCTGAGAGTGGCAGCAAAGGGAAGAAAGTC +
Preference number: 6 (lower is better)
Translates to: NESQWPWSEQFS*HAESGSKGKKV
Trigger: GACTTTCTTCCCTTTGCTGCCACTCTCAGCATGTCAGCTGAACTGTTCCGACCATGGCCACTGTGACTCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473423.1
CDS TCA 72 bp AGCCTTGGGTCACTCACCCCTTACTCTGTGGGAAGGTaGACCTGTCCATCATGTCACCTTCTTCTACCTCCT +
Preference number: 6 (lower is better)
Translates to: SLGSLTPYSVGR*TCPSCHLLLPP
Trigger: AGGAGGTAGAAGAAGGTGACATGATGGACAGGTTCACCTTCCCACAGAGTAAGGGGTGAGTGACCCAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS GCA 72 bp CCTGTCCATCATGTCACCTTCTTCTACCTCCTCAAATaGTCTCTGCTCCTTCTAGCAGCTGGGTCTGCACCA +
Preference number: 6 (lower is better)
Translates to: PVHHVTFFYLLK*SLLLLAAGSAP
Trigger: TGGTGCAGACCCAGCTGCTAGAAGGAGCAGAGAGCATTTGAGGAGGTAGAAGAAGGTGACATGATGGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CCA 72 bp ATTCTGACCATGCAGGAGTTTGCCCTTCTCTCGGTCTaGCCATGTAAAGATGGCATCATCGCTGTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: ILTMQEFALLSV*PCKDGIIAVQL
Trigger: GAGCTGGACAGCGATGATGCCATCTTTACATGGCCAGACCGAGAGAAGGGCAAACTCCTGCATGGTCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325722.8
ENST00000373266.8
CDS CAA 72 bp CCTCCACAGTGGTCCGGTCTGTGTCACTCTCACCCTTaGCATCGGTCACTTTCAGGTGAAAAGTGTAGGTTC +
Preference number: 6 (lower is better)
Translates to: PPQWSGLCHSHP*HRSLSGEKCRF
Trigger: GAACCTACACTTTTCACCTGAAAGTGACCGATGCAAAGGGTGAGAGTGACACAGACCGGACCACTGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000473844.1
ENST00000485551.5
CDS CAA 72 bp GGACCAATGGGTGAGCTGCAGGCACTAGGTAGGCTCTaGCTCCCAAATTCCCAGAATTACTCACTGACAGTG +
Preference number: 6 (lower is better)
Translates to: GPMGELQALGRL*LPNSQNYSLTV
Trigger: CACTGTCAGTGAGTAATTCTGGGAATTTGGGAGCAAGAGCCTACCTAGTGCCTGCAGCTCACCCATTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474856.1
CDS CAA 90 bp CAGGTTTCACCTCCACAGTGGTCCGGTCTGTGTCACTCTCACCCTTaGCATCGGTCACTTTCAGGTGAAAAGTGTAGGTTCCCTCAACCA +
Preference number: 6 (lower is better)
Translates to: QVSPPQWSGLCHSHP*HRSLSGEKCRFPQP
Trigger: TGGTTGAGGGAACCTACACTTTTCACCTGAAAGTGACCGATGCAAAGGGTGAGAGTGACACAGACCGGACCACTGTGGAGGTGAAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000473844.1
ENST00000485551.5
CDS CAA 90 bp GACAGTGTTGACTTCCAAGGCTCTGAATATCAAAAAGTCTGCCTTTaGCTTCCGCAGCTCACTCTTGAGCATCGCTGCCACCTCATGGCC +
Preference number: 6 (lower is better)
Translates to: DSVDFQGSEYQKVCL*LPQLTLEHRCHLMA
Trigger: GGCCATGAGGTGGCAGCGATGCTCAAGAGTGAGCTGCGGAAGCAAAAGGCAGACTTTTTGATATTCAGAGCCTTGGAAGTCAACACTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000474856.1
ENST00000485551.5
CDS CAA 90 bp GGACAGAAAGGACCAATGGGTGAGCTGCAGGCACTAGGTAGGCTCTaGCTCCCAAATTCCCAGAATTACTCACTGACAGTGTTGACTTCC +
Preference number: 6 (lower is better)
Translates to: GQKGPMGELQALGRL*LPNSQNYSLTVLTS
Trigger: GGAAGTCAACACTGTCAGTGAGTAATTCTGGGAATTTGGGAGCAAGAGCCTACCTAGTGCCTGCAGCTCACCCATTGGTCCTTTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474856.1
CDS TCA 72 bp CGAGAGAAATGCCGACCCAGGCATGTGAGAGAAAGGTaGGCACAACTTGAGGAGGTTAAGGGAGGGATAAGA +
Preference number: 6 (lower is better)
Translates to: REKCRPRHVRER*AQLEEVKGGIR
Trigger: TCTTATCCCTCCCTTAACCTCCTCAAGTTGTGCTCACCTTTCTCTCACATGCCTGGGTCGGCATTTCTCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS GCA 72 bp AAGATGGCATCATCGCTGTCCAGCTCTGACTCGGAGTaGATCAGGCTGCTACTTAGCAAAAGGCCTTTCTGT +
Preference number: 6 (lower is better)
Translates to: KMASSLSSSDSE*IRLLLSKRPFC
Trigger: ACAGAAAGGCCTTTTGCTAAGTAGCAGCCTGATGCACTCCGAGTCAGAGCTGGACAGCGATGATGCCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
CDS GCA 72 bp GCTGGGTCTGCACCAGTTTTGTTCCTTTGCCTGGAATaGTATTTCCTGCAGCTTTATCTGGCTAGCTCCCAC +
Preference number: 6 (lower is better)
Translates to: AGSAPVLFLCLE*YFLQLYLASSH
Trigger: GTGGGAGCTAGCCAGATAAAGCTGCAGGAAATAGCATTCCAGGCAAAGGAACAAAACTGGTGCAGACCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CCA 72 bp TATGTGGTGAAATGTCCTCGAGACCCACCTTGGGCATaGTGCCTGCCTTTCTCATCTCGACTGGACAAAACT +
Preference number: 6 (lower is better)
Translates to: YVVKCPRDPPWA*CLPFSSRLDKT
Trigger: AGTTTTGTCCAGTCGAGATGAGAAAGGCAGGCACCATGCCCAAGGTGGGTCTCGAGGACATTTCACCACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473423.1
CDS CCA 72 bp CTACCTCCTCAAATGCTCTCTGCTCCTTCTAGCAGCTaGGTCTGCACCAGTTTTGTTCCTTTGCCTGGAATG +
Preference number: 6 (lower is better)
Translates to: LPPQMLSAPSSS*VCTSFVPLPGM
Trigger: CATTCCAGGCAAAGGAACAAAACTGGTGCAGACCCAGCTGCTAGAAGGAGCAGAGAGCATTTGAGGAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CAA 90 bp GTAAGTGTTGACTTCCAAGGCTCTGAATATCAAAAAGTCTGCCTTTaGCTTCCGCAGCTCACTCTTGAGCATCGCTGCCACCTCATGGCC +
Preference number: 6 (lower is better)
Translates to: VSVDFQGSEYQKVCL*LPQLTLEHRCHLMA
Trigger: GGCCATGAGGTGGCAGCGATGCTCAAGAGTGAGCTGCGGAAGCAAAAGGCAGACTTTTTGATATTCAGAGCCTTGGAAGTCAACACTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473844.1
CDS TCA 72 bp CTACGTCACTGGGACTACCTCTCTTCTGAAGCTTCCTaGTTAAGCTCTGCTGGTCACTGGAAGATACAGCAG +
Preference number: 6 (lower is better)
Translates to: LRHWDYLSSEAS*LSSAGHWKIQQ
Trigger: CTGCTGTATCTTCCAGTGACCAGCAGAGCTTAATCAGGAAGCTTCAGAAGAGAGGTAGTCCCAGTGACGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325722.8
ENST00000426982.6
ENST00000431916.5
ENST00000440579.5
ENST00000469892.5
ENST00000478463.6
ENST00000482929.6
ENST00000492888.1
CDS TCA 72 bp TCTCCATCCAAAAAGGGTCACAGATACAGCGTTTGGTaGACGAGTCACAGTGGCCATGGTCGGAACAGTTCA +
Preference number: 6 (lower is better)
Translates to: SPSKKGHRYSVW*TSHSGHGRNSS
Trigger: TGAACTGTTCCGACCATGGCCACTGTGACTCGTTCACCAAACGCTGTATCTGTGACCCTTTTTGGATGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000461312.5
ENST00000473423.1
ENST00000485551.5
CDS TCA 72 bp CTAACTGCAACTACTGTCAGTTGGACACAACCACTATaGGACCAGAAGCCAAAGAGTTCCTGGAATCCCGCC +
Preference number: 6 (lower is better)
Translates to: LTATTVSWTQPL*DQKPKSSWNPA
Trigger: GGCGGGATTCCAGGAACTCTTTGGCTTCTGGTCTCATAGTGGTTGTGTCCAACTGACAGTAGTTGCAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473465.1
CDS GCA 72 bp CTGGGCGTAGTAGCAAGACCCTCTGATATTTCAGGTTaGACTGATACATTCTTTGGCCCACCAGACAGCTCT +
Preference number: 6 (lower is better)
Translates to: LGVVARPSDISG*TDTFFGPPDSS
Trigger: AGAGCTGTCTGGTGGGCCAAAGAATGTATCAGTGCAACCTGAAATATCAGAGGGTCTTGCTACTACGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000325722.8
ENST00000426982.6
ENST00000431916.5
ENST00000440579.5
ENST00000469892.5
ENST00000470388.5
ENST00000478463.6
ENST00000482929.6
ENST00000492888.1
CDS GCA 72 bp AGGAAGGAAGGCCTACTACCTGCCCTGATCTCCCAGTaGCATCACTCAAAGTCATCTTACTGTTTGTGCAAG +
Preference number: 6 (lower is better)
Translates to: RKEGLLPALISQ*HHSKSSYCLCK
Trigger: CTTGCACAAACAGTAAGATGACTTTGAGTGATGGCACTGGGAGATCAGGGCAGGTAGTAGGCCTTCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CAA 72 bp GACTTCCAAGGCTCTGAATATCAAAAAGTCTGCCTTTaGCTTCCGCAGCTCACTCTTGAGCATCGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: DFQGSEYQKVCL*LPQLTLEHRCH
Trigger: GTGGCAGCGATGCTCAAGAGTGAGCTGCGGAAGCAAAAGGCAGACTTTTTGATATTCAGAGCCTTGGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000473844.1
ENST00000474856.1
ENST00000485551.5
CDS CAA 72 bp CAGAGGTTATCAATTTTGACTTCCTTCATTTCACCTTaGTGCTCACTGCAGCCACTACAGGACCCTCGGGGC +
Preference number: 6 (lower is better)
Translates to: QRLSILTSFISP*CSLQPLQDPRG
Trigger: GCCCCGAGGGTCCTGTAGTGGCTGCAGTGAGCACAAAGGTGAAATGAAGGAAGTCAAAATTGATAACCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473465.1
CDS CAA 90 bp CTCTGGCTTGACTGTCACGTTCACATAGCCTTCCCCATGGGCATTTaGACCCTCTACAATCACTTTGAATTCATACAGGCCTGGAGTGAG +
Preference number: 6 (lower is better)
Translates to: LWLDCHVHIAFPMGI*TLYNHFEFIQAWSE
Trigger: CTCACTCCAGGCCTGTATGAATTCAAAGTGATTGTAGAGGGTCAAAATGCCCATGGGGAAGGCTATGTGAACGTGACAGTCAAGCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325722.8
ENST00000426982.6
ENST00000431916.5
ENST00000440579.5
ENST00000482929.6
ENST00000485551.5
CDS GCA 72 bp CTTCTAGCAGCTGGGTCTGCACCAGTTTTGTTCCTTTaGCTGGAATGCTATTTCCTGCAGCTTTATCTGGCT +
Preference number: 6 (lower is better)
Translates to: LLAAGSAPVLFL*LECYFLQLYLA
Trigger: AGCCAGATAAAGCTGCAGGAAATAGCATTCCAGGCAAAGGAACAAAACTGGTGCAGACCCAGCTGCTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS GCA 72 bp CCTCAAATGCTCTCTGCTCCTTCTAGCAGCTGGGTCTaGACCAGTTTTGTTCCTTTGCCTGGAATGCTATTT +
Preference number: 6 (lower is better)
Translates to: PQMLSAPSSSWV*TSFVPLPGMLF
Trigger: AAATAGCATTCCAGGCAAAGGAACAAAACTGGTGCAGACCCAGCTGCTAGAAGGAGCAGAGAGCATTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CAA 72 bp CCTCAGTCTTCATCAGGCAAAAGGGAACAAAATGCTTaGCAAGCACAGTGGGCTGTTAGTGACACACTCAGG +
Preference number: 6 (lower is better)
Translates to: PQSSSGKREQNA*QAQWAVSDTLR
Trigger: CCTGAGTGTGTCACTAACAGCCCACTGTGCTTGCAAAGCATTTTGTTCCCTTTTGCCTGATGAAGACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CAA 90 bp CCAGAAGCCAAAGAGTTCCTGGAATCCCGCCAGAGGTTATCAATTTaGACTTCCTTCATTTCACCTTTGTGCTCACTGCAGCCACTACAG +
Preference number: 6 (lower is better)
Translates to: PEAKEFLESRQRLSI*TSFISPLCSLQPLQ
Trigger: CTGTAGTGGCTGCAGTGAGCACAAAGGTGAAATGAAGGAAGTCAAAATTGATAACCTCTGGCGGGATTCCAGGAACTCTTTGGCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473465.1
CDS TCA 72 bp ATAGGTGTAACTACGTCACTGGGACTACCTCTCTTCTaGAGCTTCCTGATTAAGCTCTGCTGGTCACTGGAA +
Preference number: 6 (lower is better)
Translates to: IGVTTSLGLPLF*SFLIKLCWSLE
Trigger: TTCCAGTGACCAGCAGAGCTTAATCAGGAAGCTTCAGAAGAGAGGTAGTCCCAGTGACGTAGTTACACCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325722.8
ENST00000426982.6
ENST00000431916.5
ENST00000440579.5
ENST00000469892.5
ENST00000478463.6
ENST00000482929.6
ENST00000492888.1
CDS GCA 72 bp AGTGTTGACTTCCAAGGCTCTGAATATCAAAAAGTCTaGCTTTTGCTTCCGCAGCTCACTCTTGAGCATCGC +
Preference number: 6 (lower is better)
Translates to: SVDFQGSEYQKV*LLLPQLTLEHR
Trigger: GCGATGCTCAAGAGTGAGCTGCGGAAGCAAAAGGCAGACTTTTTGATATTCAGAGCCTTGGAAGTCAACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000473844.1
ENST00000474856.1
ENST00000485551.5
CDS GCA 72 bp CACCAGTTTTGTTCCTTTGCCTGGAATGCTATTTCCTaGAGCTTTATCTGGCTAGCTCCCACTTATCCAGGT +
Preference number: 6 (lower is better)
Translates to: HQFCSFAWNAIS*SFIWLAPTYPG
Trigger: ACCTGGATAAGTGGGAGCTAGCCAGATAAAGCTGCAGGAAATAGCATTCCAGGCAAAGGAACAAAACTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CCA 72 bp TCCTTTGCCTGGAATGCTATTTCCTGCAGCTTTATCTaGCTAGCTCCCACTTATCCAGGTCTCAGCTTAAGT +
Preference number: 6 (lower is better)
Translates to: SFAWNAISCSFI*LAPTYPGLSLS
Trigger: ACTTAAGCTGAGACCTGGATAAGTGGGAGCTAGCCAGATAAAGCTGCAGGAAATAGCATTCCAGGCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485551.5
CDS CAA 90 bp AAGGAGAGTCAGCTAATGCTCTTCACTAACTGCAACTACTGTCAGTaGGACACAACCACTATGAGACCAGAAGCCAAAGAGTTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: KESQLMLFTNCNYCQ*DTTTMRPEAKEFLE
Trigger: TTCCAGGAACTCTTTGGCTTCTGGTCTCATAGTGGTTGTGTCCAACTGACAGTAGTTGCAGTTAGTGAAGAGCATTAGCTGACTCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473465.1
CDS TCA 72 bp GGCTTATTGTTTTCAGGTTGCACAATAACAGTCACTTaGGCAGTGGCCTGCTGTCCTATTGTGTCAGTCACT +
Preference number: 6 (lower is better)
Translates to: GLLFSGCTITVT*AVACCPIVSVT
Trigger: AGTGACTGACACAATAGGACAGCAGGCCACTGCTCAAGTGACTGTTATTGTGCAACCTGAAAACAATAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000440579.5
ENST00000467109.1
ENST00000485551.5
CDS TCA 72 bp AATCGCCTTGTGGACCTGTTGACAACCACAGAACGCTaGAGCAAAAGCAAGTATAAAACAGGTACAGGCTTC +
Preference number: 6 (lower is better)
Translates to: NRLVDLLTTTER*SKSKYKTGTGF
Trigger: GAAGCCTGTACCTGTTTTATACTTGCTTTTGCTTCAGCGTTCTGTGGTTGTCAACAGGTCCACAAGGCGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470388.5
CDS GCA 72 bp ACCAGCCCGCAGACAAGAAGATCTCTGAGTTTTAGTTaGAGTTCTGCTACTAACAGCTTTGTGACTTTGACC +
Preference number: 6 (lower is better)
Translates to: TSPQTRRSLSFS*SSATNSFVTLT
Trigger: GGTCAAAGTCACAAAGCTGTTAGTAGCAGAACTGCAACTAAAACTCAGAGATCTTCTTGTCTGCGGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494948.1
CDS CAA 72 bp ACAGCTTTGTTCACTGTCAGGTTTGCAGTAGTAGAGTaGGTAGCTCCATCAGAGTCTACTACAGTCAAGCTG +
Preference number: 6 (lower is better)
Translates to: TALFTVRFAVVE*VAPSESTTVKL
Trigger: CAGCTTGACTGTAGTAGACTCTGATGGAGCTACCAACTCTACTACTGCAAACCTGACAGTGAACAAAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325722.8
ENST00000426982.6
ENST00000440579.5
ENST00000485551.5
CDS CAA 72 bp AGGCTTATTGTTTTCAGGTTGCACAATAACAGTCACTaGAGCAGTGGCCTGCTGTCCTATTGTGTCAGTCAC +
Preference number: 6 (lower is better)
Translates to: RLIVFRLHNNSH*SSGLLSYCVSH
Trigger: GTGACTGACACAATAGGACAGCAGGCCACTGCTCAAGTGACTGTTATTGTGCAACCTGAAAACAATAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000440579.5
ENST00000467109.1
ENST00000485551.5
CDS CAA 72 bp CAGCTAATGCTCTTCACTAACTGCAACTACTGTCAGTaGGACACAACCACTATGAGACCAGAAGCCAAAGAG +
Preference number: 6 (lower is better)
Translates to: QLMLFTNCNYCQ*DTTTMRPEAKE
Trigger: CTCTTTGGCTTCTGGTCTCATAGTGGTTGTGTCCAACTGACAGTAGTTGCAGTTAGTGAAGAGCATTAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473465.1
CDS CAA 90 bp GGCATTCTTAAATCTCAGGTAATAAGCTTGGCTTCTCAAGCAAACTaGAAAACTGCCCTGGTTAGCAACCAAGTAGGGAGCAGAGACAGA +
Preference number: 6 (lower is better)
Translates to: GILKSQVISLASQAN*KTALVSNQVGSRDR
Trigger: TCTGTCTCTGCTCCCTACTTGGTTGCTAACCAGGGCAGTTTTCAAGTTTGCTTGAGAAGCCAAGCTTATTACCTGAGATTTAAGAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476329.1
CDS CAA 90 bp GACAGTGCTGTTGGCTCTGGCATTCTTAAATCTCAGGTAATAAGCTaGGCTTCTCAAGCAAACTTGAAAACTGCCCTGGTTAGCAACCAA +
Preference number: 6 (lower is better)
Translates to: DSAVGSGILKSQVIS*ASQANLKTALVSNQ
Trigger: TTGGTTGCTAACCAGGGCAGTTTTCAAGTTTGCTTGAGAAGCCAAGCTTATTACCTGAGATTTAAGAATGCCAGAGCCAACAGCACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476329.1
CDS CAA 90 bp GGTAGGCTCTTGCTCCCAAATTCCCAGAATTACTCACTGACAGTGTaGACTTCCAAGGCTCTGAATATCAAAAAGTCTGCCTTTTGCTTC +
Preference number: 6 (lower is better)
Translates to: GRLLLPNSQNYSLTV*TSKALNIKKSAFCF
Trigger: GAAGCAAAAGGCAGACTTTTTGATATTCAGAGCCTTGGAAGTCAACACTGTCAGTGAGTAATTCTGGGAATTTGGGAGCAAGAGCCTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474856.1
CDS TCA 72 bp ATGGAAAGAGTACCAGCCCGCAGACAAGAAGATCTCTaGGTTTTAGTTGCAGTTCTGCTACTAACAGCTTTG +
Preference number: 6 (lower is better)
Translates to: MERVPARRQEDL*VLVAVLLLTAL
Trigger: CAAAGCTGTTAGTAGCAGAACTGCAACTAAAACTCAGAGATCTTCTTGTCTGCGGGCTGGTACTCTTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494948.1
CDS GCA 72 bp TCTTCTTTGACAATGACATTCACAGAGCTCTGGCTTTaGAGGTTCCTCTCATCTTTGACAGTCAAGGTGAAC +
Preference number: 6 (lower is better)
Translates to: SSLTMTFTELWL*RFLSSLTVKVN
Trigger: GTTCACCTTGACTGTCAAAGATGAGAGGAACCTGCAAAGCCAGAGCTCTGTGAATGTCATTGTCAAAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000485551.5
ENST00000492544.1
CDS CCA 72 bp TCCTGCTGGTTCTTCATCTCCAGTATCCATGAGCTTTaGTTCAGGCCACTCAGTGACATTCTCTTTTCTTTA +
Preference number: 6 (lower is better)
Translates to: SCWFFISSIHEL*FRPLSDILFSL
Trigger: TAAAGAAAAGAGAATGTCACTGAGTGGCCTGAACCAAAGCTCATGGATACTGGAGATGAAGAACCAGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461312.5
CDS CAA 72 bp AAATCTCAGGTAATAAGCTTGGCTTCTCAAGCAAACTaGAAAACTGCCCTGGTTAGCAACCAAGTAGGGAGC +
Preference number: 6 (lower is better)
Translates to: KSQVISLASQAN*KTALVSNQVGS
Trigger: GCTCCCTACTTGGTTGCTAACCAGGGCAGTTTTCAAGTTTGCTTGAGAAGCCAAGCTTATTACCTGAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476329.1
CDS GCA 72 bp AGACCACCTAATTCGTTGGAGTCATTCACTTTAGAATaGTGTGTCACTATAGGTGTAACTACGTCACTGGGA +
Preference number: 6 (lower is better)
Translates to: RPPNSLESFTLE*CVTIGVTTSLG
Trigger: TCCCAGTGACGTAGTTACACCTATAGTGACACAGCATTCTAAAGTGAATGACTCCAACGAATTAGGTGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000325722.8
ENST00000426982.6
ENST00000431916.5
ENST00000440579.5
ENST00000469892.5
ENST00000478463.6
ENST00000482929.6
ENST00000492888.1
CDS CAA 72 bp TTCTTCTTTGACAATGACATTCACAGAGCTCTGGCTTaGCAGGTTCCTCTCATCTTTGACAGTCAAGGTGAA +
Preference number: 6 (lower is better)
Translates to: FFFDNDIHRALA*QVPLIFDSQGE
Trigger: TTCACCTTGACTGTCAAAGATGAGAGGAACCTGCAAAGCCAGAGCTCTGTGAATGTCATTGTCAAAGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000485551.5
ENST00000492544.1
CDS CAA 72 bp GTTGGCTCTGGCATTCTTAAATCTCAGGTAATAAGCTaGGCTTCTCAAGCAAACTTGAAAACTGCCCTGGTT +
Preference number: 6 (lower is better)
Translates to: VGSGILKSQVIS*ASQANLKTALV
Trigger: AACCAGGGCAGTTTTCAAGTTTGCTTGAGAAGCCAAGCTTATTACCTGAGATTTAAGAATGCCAGAGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476329.1
CDS CAA 72 bp TTGCTCCCAAATTCCCAGAATTACTCACTGACAGTGTaGACTTCCAAGGCTCTGAATATCAAAAAGTCTGCC +
Preference number: 6 (lower is better)
Translates to: LLPNSQNYSLTV*TSKALNIKKSA
Trigger: GGCAGACTTTTTGATATTCAGAGCCTTGGAAGTCAACACTGTCAGTGAGTAATTCTGGGAATTTGGGAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474856.1
CDS CAA 90 bp TCTGCTGTGCTCGTGGGTAGGGTAATCACCACATTCCCAGTTATCTaGGCTATAGGTGGTTTGTTTATTTCTTCTTTGACAATGACATTC +
Preference number: 6 (lower is better)
Translates to: SAVLVGRVITTFPVI*AIGGLFISSLTMTF
Trigger: GAATGTCATTGTCAAAGAAGAAATAAACAAACCACCTATAGCCAAGATAACTGGGAATGTGGTGATTACCCTACCCACGAGCACAGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325722.8
ENST00000373266.8
ENST00000426982.6
ENST00000485551.5
ENST00000492544.1
CDS CAA 90 bp AGCTGGAAAAATGAACAGATTGTTCTGGGAGGTCGTCTTTCCAATTaGTTCCTAGTTTTCAGTCTGTTAATCACAGGAGAGAGCACAAGG +
Preference number: 6 (lower is better)
Translates to: SWKNEQIVLGGRLSN*FLVFSLLITGESTR
Trigger: CCTTGTGCTCTCTCCTGTGATTAACAGACTGAAAACTAGGAACAAATTGGAAAGACGACCTCCCAGAACAATCTGTTCATTTTTCCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473465.1
CDS CAA 90 bp TCTCTGAGTTTTAGTTGCAGTTCTGCTACTAACAGCTTTGTGACTTaGACCAAACACACTTTCTTACTTTTGAGGAGAAGAGGTTGCACC +
Preference number: 6 (lower is better)
Translates to: SLSFSCSSATNSFVT*TKHTFLLLRRRGCT
Trigger: GGTGCAACCTCTTCTCCTCAAAAGTAAGAAAGTGTGTTTGGTCAAAGTCACAAAGCTGTTAGTAGCAGAACTGCAACTAAAACTCAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494948.1
CDS CAA 72 bp AATGAACAGATTGTTCTGGGAGGTCGTCTTTCCAATTaGTTCCTAGTTTTCAGTCTGTTAATCACAGGAGAG +
Preference number: 6 (lower is better)
Translates to: NEQIVLGGRLSN*FLVFSLLITGE
Trigger: CTCTCCTGTGATTAACAGACTGAAAACTAGGAACAAATTGGAAAGACGACCTCCCAGAACAATCTGTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473465.1
CDS CAA 72 bp TTTAGTTGCAGTTCTGCTACTAACAGCTTTGTGACTTaGACCAAACACACTTTCTTACTTTTGAGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: FSCSSATNSFVT*TKHTFLLLRRR
Trigger: TCTTCTCCTCAAAAGTAAGAAAGTGTGTTTGGTCAAAGTCACAAAGCTGTTAGTAGCAGAACTGCAACTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494948.1