RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KIAA0232 (Homo sapiens)

Ensembl gene IDs: ENSG00000170871

Ensembl transcript IDs: ENST00000307659.6, ENST00000425103.5, ENST00000503069.1, ENST00000503278.1, ENST00000508423.1

Found 550 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATaGGCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCC +
Preference number: 1 (lower is better)
Translates to: RAGGADRHAQTRLTR*AGSPGSPRRNGSQS
Trigger: GGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR GCA 90 bp CGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATaGCATGAGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACT +
Preference number: 1 (lower is better)
Translates to: RLCTYCSSWPLPVAQ*HESRRSGSPCTDAT
Trigger: AGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCTCATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR TCA 90 bp GTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATaGGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAA +
Preference number: 1 (lower is better)
Translates to: VHILLLLASACGTMP*EPEERIAMHRRDSQ
Trigger: TTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCTCATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR CCA 90 bp AAATGTTTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTaGCACAATGCCATGAGAGCCGGAGGAGCGGATCGCCATGCACAG +
Preference number: 1 (lower is better)
Translates to: KCFGCAHTAPPGLCL*HNAMRAGGADRHAQ
Trigger: CTGTGCATGGCGATCCGCTCCTCCGGCTCTCATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAAACATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR GCA 90 bp AATGTAAAATGTTTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTaGCTGTGGCACAATGCCATGAGAGCCGGAGGAGCGGATCGCCAT +
Preference number: 1 (lower is better)
Translates to: NVKCFGCAHTAPPGL*LWHNAMRAGGADRH
Trigger: ATGGCGATCCGCTCCTCCGGCTCTCATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAAACATTTTACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR GCA 90 bp CCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGTGGAAGGTGCTaGATCTTCTCACCTGTGTCTGAGGAAGTGTGCACCTTTGCCACC +
Preference number: 1 (lower is better)
Translates to: PFAHFESVPFTCGRC*IFSPVSEEVCTFAT
Trigger: GGTGGCAAAGGTGCACACTTCCTCAGACACAGGTGAGAAGATGCAGCACCTTCCACAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR GCA 90 bp AATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGTGGAAGGTaGTGCATCTTCTCACCTGTGTCTGAGGAAGTGTGCACCTTTGCC +
Preference number: 1 (lower is better)
Translates to: NPFAHFESVPFTCGR*CIFSPVSEEVCTFA
Trigger: GGCAAAGGTGCACACTTCCTCAGACACAGGTGAGAAGATGCAGCACCTTCCACAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR GCA 90 bp AATGAGATCGAAGCTATACTACATCACAGCCAAGAAGCGGCTAGCTaGAGCAGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTG +
Preference number: 1 (lower is better)
Translates to: NEIEAILHHSQEAAS*SSQRFLWVMRWPLL
Trigger: CAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCTGCTGCAGCTAGCCGCTTCTTGGCTGTGATGTAGTATAGCTTCGATCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR CCA 90 bp TGCATCTTCTCACCTGTGTCTGAGGAAGTGTGCACCTTTGCCACCTaGAGCCCTTTCCTAATAAACAGCAGCTGTCCAAAATCAACTGTG +
Preference number: 1 (lower is better)
Translates to: CIFSPVSEEVCTFAT*SPFLINSSCPKSTV
Trigger: CACAGTTGATTTTGGACAGCTGCTGTTTATTAGGAAAGGGCTCCAGGTGGCAAAGGTGCACACTTCCTCAGACACAGGTGAGAAGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR CCA 90 bp GAAGCGGCTAGCTGCAGCAGCCAAAGATTTCTCTGGGTGATGAGGTaGCCTTTACTGCATGTCAAATGTTCACAATTTCAAGTTTTGGGG +
Preference number: 1 (lower is better)
Translates to: EAASCSSQRFLWVMR*PLLHVKCSQFQVLG
Trigger: CCCCAAAACTTGAAATTGTGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCTGCTGCAGCTAGCCGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR CCA 90 bp CATCACAGCCAAGAAGCGGCTAGCTGCAGCAGCCAAAGATTTCTCTaGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCACAATTT +
Preference number: 1 (lower is better)
Translates to: HHSQEAASCSSQRFL*VMRWPLLHVKCSQF
Trigger: AAATTGTGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCTGCTGCAGCTAGCCGCTTCTTGGCTGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR TCA 90 bp CAAAGCTGCACAATGTTTTCAGCAGTGTCTGCAATGAGAGCTAAATaGCCTCCATCTAGAACAAATGTAACCTGGGCACTTGCTCTTCCA +
Preference number: 1 (lower is better)
Translates to: QSCTMFSAVSAMRAK*PPSRTNVTWALALP
Trigger: TGGAAGAGCAAGTGCCCAGGTTACATTTGTTCTAGATGGAGGTCATTTAGCTCTCATTGCAGACACTGCTGAAAACATTGTGCAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR TCA 90 bp AATAAACAGCAGCTGTCCAAAATCAACTGTGCTCAAGGTTGTGTCTaGAATCTATTTATTTGGTCTTTGCTACACAAGCAACGATTTCTA +
Preference number: 1 (lower is better)
Translates to: NKQQLSKINCAQGCV*NLFIWSLLHKQRFL
Trigger: TAGAAATCGTTGCTTGTGTAGCAAAGACCAAATAAATAGATTTCAGACACAACCTTGAGCACAGTTGATTTTGGACAGCTGCTGTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAAATGGAGACCACCGCTaGGTCACCCAGGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATNGDHR*VTQASL
Trigger: GAGGGAAGCCTGGGTGACTCAGCGGTGGTCTCCATT...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAAGAGCAGGTAAGGGGTaGGGTATGCACCCTTACCCC +
Preference number: 2 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATRAGKG*GMHPYP
Trigger: GGGGTAAGGGTGCATACCCCACCCCTTACCTGCTCT...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTGATGTGGAAAACTCATaGCTCTACCCGCCCCAACCC +
Preference number: 2 (lower is better)
Translates to: EPEERIAMHRRDSQDAPADVENS*LYPPQP
Trigger: GGGTTGGGGCGGGTAGAGTCATGAGTTTTCCACATC...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAAGCAGAAGTGGTTGTTaGCACTGCAATGCTAGTAAG +
Preference number: 2 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATSRSGC*HCNASK
Trigger: CTTACTAGCATTGCAGTGTCAACAACCACTTCTGCT...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACACACACCCCAAATCCTTaGCTTCTTCAGTTAGCAAGA +
Preference number: 2 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATHTPNP*LLQLAR
Trigger: TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTG...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTGTATTTGGTGAGTCTTaGAAAGCACACCTCTGCGGT +
Preference number: 2 (lower is better)
Translates to: EPEERIAMHRRDSQDAPAVFGES*KAHLCG
Trigger: ACCGCAGAGGTGTGCTTTTCAAGACTCACCAAATAC...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCCACCACACAGGGATGTaGAAAACTCATGACTCTACC +
Preference number: 2 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGHHTGM*KTHDST
Trigger: GGTAGAGTCATGAGTTTTCCACATCCCTGTGTGGTG...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAAAACACAGTATTTGGTaGGTCTTGAAAAGCACACCT +
Preference number: 2 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATKHSIW*VLKSTP
Trigger: AGGTGTGCTTTTCAAGACTCACCAAATACTGTGTTT...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACCAGGTCCCTCTCGGTaGGGACACACAGACCCTCAA +
Preference number: 2 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAPGPSR*GHTDPQ
Trigger: TTGAGGGTCTGTGTGTCCTCACCGAGAGGGACCTGG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCCACCACAAAGAACCCTaGATGGGGTTTTGGTGTAAA +
Preference number: 2 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGHHKEP*MGFWCK
Trigger: TTTACACCAAAACCCCATGCAGGGTTCTTTGTGGTG...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACGGCTGTGCACATACTaGTCCTCCTGGCCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: GAADFSAGHTTFFPSKAARLCTY*SSWPLP
Trigger: AGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCCACACCCCAAATCCTTaGCTTCTTCAGTTAGCAAGA +
Preference number: 2 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGHTPNP*LLQLAR
Trigger: TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTG...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTACCACACACAGAACTTaGCCAGAACATTCTCTCAAA +
Preference number: 2 (lower is better)
Translates to: EPEERIAMHRRDSQDAPATTHRT*PEHSLK
Trigger: TTTGAGAGAATGTTCTGGGCAAGTTCTGTGTGTGGT...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGACATACTGCTCCTCCTaGCCTCTGCCTGTGGCACAA +
Preference number: 2 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGTYCSS*PLPVAQ
Trigger: TTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGT...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTTCTAAGACAAGCACATaGACACCCATTCTTGATTTG +
Preference number: 2 (lower is better)
Translates to: EPEERIAMHRRDSQDAPASKTST*TPILDL
Trigger: CAAATCAAGAATGGGTGTGCATGTGCTTGTCTTAGA...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAACGCGACTCACAAGATaGGCCGGCTCCCCGGGCTCA +
Preference number: 2 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGTRLTR*AGSPGS
Trigger: TGAGCCCGGGGAGCCGGCGCATCTTGTGAGTCGCGT...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCATTAACAGGTCTCACTaGAGAGTAATTTTCCATCAC +
Preference number: 2 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGINRSH*RVIFHH
Trigger: GTGATGGAAAATTACTCTTCAGTGAGACCTGTTAAT...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTCACCCATTCTTGATTTaGCAACACAATCTAGTCTAT +
Preference number: 2 (lower is better)
Translates to: EPEERIAMHRRDSQDAPAHPFLI*QHNLVY
Trigger: ATAGACTAGATTGTGTTGTCAAATCAAGAATGGGTG...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGTACTGCCTGCCCAAATaGGTGGTGAAGCTGTCTAGA +
Preference number: 2 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGYCLPK*VVKLSR
Trigger: TCTAGACAGCTTCACCACTCATTTGGGCAGGCAGTA...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTACGCGACTCACAAGATaGGCCGGCTCCCCGGGCTCA +
Preference number: 2 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFTRLTR*AGSPGS
Trigger: TGAGCCCGGGGAGCCGGCGCATCTTGTGAGTCGCGT...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGTTCACCTGTGGAAGGTaGTGCATCTTCTCACCTGTG +
Preference number: 2 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGFTCGR*CIFSPV
Trigger: CACAGGTGAGAAGATGCAGCACCTTCCACAGGTGAA...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGTGTAACCTGGGCACTTaGTCTTCCACGGATGCTCAT +
Preference number: 2 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGCNLGT*SSTDAH
Trigger: ATGAGCATCCGTGGAAGAGCAAGTGCCCAGGTTACA...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGATGTGGCACAATGCCATaGGAGCCGGAGGAGCGGATC +
Preference number: 2 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGCGTMP*EPEERI
Trigger: GATCCGCTCCTCCGGCTCTCATGGCATTGTGCCACA...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGTTCCACGGATGCTCATaGGTAAAAGGAAGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGFHGCS*VKGSWS
Trigger: ACTCCAGCTTCCTTTTACTCATGAGCATCCGTGGAA...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAATGGGGAGGAGCCGCTaGTTTCTCAGCAGGCCACAC +
Preference number: 2 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGMGRSR*FLSRPH
Trigger: GTGTGGCCTGCTGAGAAATCAGCGGCTCCTCCCCAT...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCAACCTGTGGAAGGTGCTaGATCTTCTCACCTGTGTCT +
Preference number: 2 (lower is better)
Translates to: GAADFSAGHTTFFPSKAATCGRC*IFSPVS
Trigger: AGACACAGGTGAGAAGATGCAGCACCTTCCACAGGT...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACACCACAAAGAACCCTaGATGGGGTTTTGGTGTAAA +
Preference number: 2 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAHHKEP*MGFWCK
Trigger: TTTACACCAAAACCCCATGCAGGGTTCTTTGTGGTG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTATAAAACCTTACACATaGGCGCGCGCACGCGCGCAC +
Preference number: 2 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFIKPYT*ARARAH
Trigger: GTGCGCGCGTGCGCGCGCGCATGTGTAAGGTTTTAT...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGTCAGTGCTATGGAAATaGAATGCGCTTCATACCACA +
Preference number: 2 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGSVLWK*NALHTT
Trigger: TGTGGTATGAAGCGCATTGCATTTCCATAGCACTGA...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGACTTCTCACCTGTGTCTaGGGAAGTGTGCACCTTTGC +
Preference number: 2 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGLLTCV*GSVHLC
Trigger: GCAAAGGTGCACACTTCCTCAGACACAGGTGAGAAG...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGTGGTGTAAATGTAACTaGAGTATGAGAGCAGGTAAG +
Preference number: 2 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGWCKCN*SMRAGK
Trigger: CTTACCTGCTCTCATACTGCAGTTACATTTACACCA...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR CAA 90 bp AGATTGAGCTTTGTGTACCATCCACGGACAAAAATGCTATGTGTTTaGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATG +
Preference number: 2 (lower is better)
Translates to: RLSFVYHPRTKMLCV*QTQVVVPACAGGEM
Trigger: CATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACATAGCATTTTTGTCCGTGGATGGTACACAAAGCTCAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGAATGGAGACCACCGCTaGGTCACCCAGGCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: KYIICESLCSLRIRPIHLNGDHR*VTQASL
Trigger: GAGGGAAGCCTGGGTGACTCAGCGGTGGTCTCCATT...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCATTACTCTGGTGTACGTaGAATCAGAACAATACAACC +
Preference number: 2 (lower is better)
Translates to: GAADFSAGHTTFFPSKAALLWCT*NQNNTT
Trigger: GGTTGTATTGTTCTGATTTCACGTACACCAGAGTAA...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCAAGAACAAAGCCTAAATaGTCCAAAGCTGAAGTCTCT +
Preference number: 2 (lower is better)
Translates to: GAADFSAGHTTFFPSKAARTKPK*SKAEVS
Trigger: AGAGACTTCAGCTTTGGAGCATTTAGGCTTTGTTCT...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCATGGTGTAAATGTAACTaGAGTATGAGAGCAGGTAAG +
Preference number: 2 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAWCKCN*SMRAGK
Trigger: CTTACCTGCTCTCATACTGCAGTTACATTTACACCA...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGATTCCACGGATGCTCATaGGTAAAAGGAAGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGFHGCS*VKGSWS
Trigger: ACTCCAGCTTCCTTTTACTCATGAGCATCCGTGGAA...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTTTCACCTGTGGAAGGTaGTGCATCTTCTCACCTGTG +
Preference number: 2 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFFTCGR*CIFSPV
Trigger: CACAGGTGAGAAGATGCAGCACCTTCCACAGGTGAA...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGGTGTCTGAGGAAGTGTaGACCTTTGCCACCTGGAGC +
Preference number: 2 (lower is better)
Translates to: KYIICESLCSLRIRPIHLVSEEV*TFATWS
Trigger: GCTCCAGGTGGCAAAGGTGCACACTTCCTCAGACAC...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAATTTGTGAATCCCTTTaGTCACTTCGAATCCGTCCC +
Preference number: 2 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGICESL*SLRIRP
Trigger: GGGACGGATTCGAAGTGAGCAAAGGGATTCACAAAT...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGACCCTGCATGGGGTTTTaGTGTAAATGTAACTGCAGT +
Preference number: 2 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGPCMGF*CKCNCS
Trigger: ACTGCAGTTACATTTACACCAAAACCCCATGCAGGG...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAGTATTTGGTGAGTCTTaGAAAGCACACCTCTGCGGT +
Preference number: 2 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSVFGES*KAHLCG
Trigger: ACCGCAGAGGTGTGCTTTTCAAGACTCACCAAATAC...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTCCAGGCATGCTACGCTaGTTTCACAGATTAGGTTTT +
Preference number: 2 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFPGMLR*FHRLGF
Trigger: AAAACCTAATCTGTGAAATCAGCGTAGCATGCCTGG...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAAGAACAAAGCCTAAATaGTCCAAAGCTGAAGTCTCT +
Preference number: 2 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGRTKPK*SKAEVS
Trigger: AGAGACTTCAGCTTTGGAGCATTTAGGCTTTGTTCT...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCACCCTGCATGGGGTTTTaGTGTAAATGTAACTGCAGT +
Preference number: 2 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSPCMGF*CKCNCS
Trigger: ACTGCAGTTACATTTACACCAAAACCCCATGCAGGG...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAACAAAGAACCCTGCATaGGGTTTTGGTGTAAATGTA +
Preference number: 2 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGTKNPA*GFGVNV
Trigger: TACATTTACACCAAAACCCCATGCAGGGTTCTTTGT...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGACACCCATTCTTGATTTaGCAACACAATCTAGTCTAT +
Preference number: 2 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGHPFLI*QHNLVY
Trigger: ATAGACTAGATTGTGTTGTCAAATCAAGAATGGGTG...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAAGAAAACAAAAAGATTaGGCTTTGTGTACCATCCAC +
Preference number: 2 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGRKQKD*ALCTIH
Trigger: GTGGATGGTACACAAAGCTCAATCTTTTTGTTTTCT...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR GCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACACAAGAAGCGGCTAGCTaGAGCAGCCAAAGATTTCTC +
Preference number: 2 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITQEAAS*SSQRFL
Trigger: GAGAAATCTTTGGCTGCTGCAGCTAGCCGCTTCTTG...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACACTCTGGGTGATGAGGTaGCCTTTACTGCATGTCAAA +
Preference number: 2 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITLWVMR*PLLHVK
Trigger: TTTGACATGCAGTAAAGGCCACCTCATCACCCAGAG...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGAGCCAAAGATTTCTCTaGGTGATGAGGTGGCCTTTA +
Preference number: 2 (lower is better)
Translates to: KYIICESLCSLRIRPIHLSQRFL*VMRWPL
Trigger: TAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR TCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAATTAACAGGTCTCACTaGAGAGTAATTTTCCATCAC +
Preference number: 2 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSINRSH*RVIFHH
Trigger: GTGATGGAAAATTACTCTTCAGTGAGACCTGTTAAT...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR CAA 90 bp ATGAGGTGGCCTTTACTGCATGTCAAATGTTCACAATTTCAAGTTTaGGGGGTTTCAATTCAACATAGGTCACCAGAAAGTAACAATCTG +
Preference number: 2 (lower is better)
Translates to: MRWPLLHVKCSQFQV*GVSIQHRSPESNNL
Trigger: CAGATTGTTACTTTCTGGTGACCTATGTTGAATTGAAACCCCCAAAACTTGAAATTGTGAACATTTGACATGCAGTAAAGGCCACCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR GCA 72 bp GGAGCGGATCGCCATGCACAGACGCGACTCACAAGATaGGCCGGCTCCCCGGGCTCACCAAGGAGAAACGGG +
Preference number: 3 (lower is better)
Translates to: GADRHAQTRLTR*AGSPGSPRRNG
Trigger: CCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR TCA 72 bp CTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATaGGAGCCGGAGGAGCGGATCGCCATGCACAGACGC +
Preference number: 3 (lower is better)
Translates to: LLLLASACGTMP*EPEERIAMHRR
Trigger: GCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCTCATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR GCA 72 bp GCACAATGCCATGAGAGCCGGAGGAGCGGATCGCCATaGACAGACGCGACTCACAAGATGCGCCGGCTCCCC +
Preference number: 3 (lower is better)
Translates to: AQCHESRRSGSP*TDATHKMRRLP
Trigger: GGGGAGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCTCATGGCATTGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR GCA 72 bp ACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATaGCATGAGAGCCGGAGGAGCGGATCGCCATGCACA +
Preference number: 3 (lower is better)
Translates to: TYCSSWPLPVAQ*HESRRSGSPCT
Trigger: TGTGCATGGCGATCCGCTCCTCCGGCTCTCATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR GCA 72 bp TGTTTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTaGCTGTGGCACAATGCCATGAGAGCCGGAGGAGCG +
Preference number: 3 (lower is better)
Translates to: CFGCAHTAPPGL*LWHNAMRAGGA
Trigger: CGCTCCTCCGGCTCTCATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CAA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCCCACACCCCAAATCCTaGGCTTCTTCAGTTAGCAAG +
Preference number: 3 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGPHPKS*ASSVSK
Trigger: CTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGG...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CAA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCCACCACACACAGAACTaGCCCAGAACATTCTCTCAA +
Preference number: 3 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGHHTQN*PRTFSQ
Trigger: TTGAGAGAATGTTCTGGGCAAGTTCTGTGTGTGGTG...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR CCA 72 bp TGTAAAATGTTTCGGCTGTGCACATACTGCTCCTCCTaGCCTCTGCCTGTGGCACAATGCCATGAGAGCCGG +
Preference number: 3 (lower is better)
Translates to: CKMFRLCTYCSS*PLPVAQCHESR
Trigger: CCGGCTCTCATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAAACATTTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR GCA 72 bp CACTTCGAATCCGTCCCATTCACCTGTGGAAGGTGCTaGATCTTCTCACCTGTGTCTGAGGAAGTGTGCACC +
Preference number: 3 (lower is better)
Translates to: HFESVPFTCGRC*IFSPVSEEVCT
Trigger: GGTGCACACTTCCTCAGACACAGGTGAGAAGATGCAGCACCTTCCACAGGTGAATGGGACGGATTCGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR GCA 72 bp GCTCACTTCGAATCCGTCCCATTCACCTGTGGAAGGTaGTGCATCTTCTCACCTGTGTCTGAGGAAGTGTGC +
Preference number: 3 (lower is better)
Translates to: AHFESVPFTCGR*CIFSPVSEEVC
Trigger: GCACACTTCCTCAGACACAGGTGAGAAGATGCAGCACCTTCCACAGGTGAATGGGACGGATTCGAAGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CAA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACCACACCCCAAATCCTaGGCTTCTTCAGTTAGCAAG +
Preference number: 3 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAPHPKS*ASSVSK
Trigger: CTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CAA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGACACTTTCATCTCTGTaGCTGAAAGCCTCTGAGCTT +
Preference number: 3 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGTLSSL*LKASEL
Trigger: AAGCTCAGAGGCTTTCAGCAACAGAGATGAAAGTGT...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR GCA 72 bp GAAGCTATACTACATCACAGCCAAGAAGCGGCTAGCTaGAGCAGCCAAAGATTTCTCTGGGTGATGAGGTGG +
Preference number: 3 (lower is better)
Translates to: EAILHHSQEAAS*SSQRFLWVMRW
Trigger: CCACCTCATCACCCAGAGAAATCTTTGGCTGCTGCAGCTAGCCGCTTCTTGGCTGTGATGTAGTATAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR CCA 72 bp CAAGAAGCGGCTAGCTGCAGCAGCCAAAGATTTCTCTaGGTGATGAGGTGGCCTTTACTGCATGTCAAATGT +
Preference number: 3 (lower is better)
Translates to: QEAASCSSQRFL*VMRWPLLHVKC
Trigger: ACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCTGCTGCAGCTAGCCGCTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR TCA 72 bp AGCTGTCTAGAGCGCATCAGACTTTTCTGCCATTCCTaGTGCTCCAGGCATGCTACGCTGATTTCACAGATT +
Preference number: 3 (lower is better)
Translates to: SCLERIRLFCHS*CSRHATLISQI
Trigger: AATCTGTGAAATCAGCGTAGCATGCCTGGAGCATCAGGAATGGCAGAAAAGTCTGATGCGCTCTAGACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CAA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTAATGTACATGAGATTTaGCTGAATGGAGACCACCGC +
Preference number: 3 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFNVHEI*LNGDHR
Trigger: GCGGTGGTCTCCATTCAGCAAAATCTCATGTACATT...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CAA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAAATGTACATGAGATTTaGCTGAATGGAGACCACCGC +
Preference number: 3 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSNVHEI*LNGDHR
Trigger: GCGGTGGTCTCCATTCAGCAAAATCTCATGTACATT...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CAA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAAAAATGCTATGTGTTTaGCAGACTCAGGTAGTAGTC +
Preference number: 3 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGKMLCV*QTQVVV
Trigger: GACTACTACCTGAGTCTGCAAAACACATAGCATTTT...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR TCA 72 bp ATTATATGTGTGTTTACTGCCTGCCCAAATGAGTGGTaGAGCTGTCTAGAGCGCATCAGACTTTTCTGCCAT +
Preference number: 3 (lower is better)
Translates to: IICVFTACPNEW*SCLERIRLFCH
Trigger: ATGGCAGAAAAGTCTGATGCGCTCTAGACAGCTTCACCACTCATTTGGGCAGGCAGTAAACACACATATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR TCA 72 bp ACAGAACTTGCCCAGAACATTCTCTCAAACACAAAATaGGATCGAAGCTATACTACATCACAGCCAAGAAGC +
Preference number: 3 (lower is better)
Translates to: TELAQNILSNTK*DRSYTTSQPRS
Trigger: GCTTCTTGGCTGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCAAGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR TCA 72 bp ACAATGTTTTCAGCAGTGTCTGCAATGAGAGCTAAATaGCCTCCATCTAGAACAAATGTAACCTGGGCACTT +
Preference number: 3 (lower is better)
Translates to: TMFSAVSAMRAK*PPSRTNVTWAL
Trigger: AAGTGCCCAGGTTACATTTGTTCTAGATGGAGGTCATTTAGCTCTCATTGCAGACACTGCTGAAAACATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR GCA 72 bp ATATATACTGTACATTCAGAATCCTGGAAAGGGGCTTaGACAGATGTTACCAGTGTATGTCTCAGAGTGACA +
Preference number: 3 (lower is better)
Translates to: IYTVHSESWKGA*TDVTSVCLRVT
Trigger: TGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCAGGATTCTGAATGTACAGTATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR-3UTR CAA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGCAACTGTGCTCAAGGTaGTGTCTGAAATCTATTTAT +
Preference number: 3 (lower is better)
Translates to: KYIICESLCSLRIRPIHLQLCSR*CLKSIY
Trigger: ATAAATAGATTTCAGACACAACCTTGAGCACAGTTG...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTAGCGCCGGGCGGCCCTaGCCTGCGCCTTACGTAAAG +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPASAGRP*PAPYVK
Trigger: CTTTACGTAAGGCGCAGGCCAGGGCCGCCCGGCGCT...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307659.6
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTCAGTGTACACTACCTaGCGAGGCTGCCGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSSVYTT*RGCRAA
Trigger: CGCCGCCCGGCAGCCTCGGCAGGTAGTGTACACTGA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307659.6
CDS-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTACGCGACTCACAAGATaGGCCGGCTCCCCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPATRLTR*AGSPGS
Trigger: TGAGCCCGGGGAGCCGGCGCATCTTGTGAGTCGCGT...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCACGCGACTCACAAGATaGGCCGGCTCCCCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSTRLTR*AGSPGS
Trigger: TGAGCCCGGGGAGCCGGCGCATCTTGTGAGTCGCGT...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACACGGCTGTGCACATACTaGTCCTCCTGGCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATRLCTY*SSWPLP
Trigger: AGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCG...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAATAAAACCTTACACATaGGCGCGCGCACGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATIKPYT*ARARAH
Trigger: GTGCGCGCGTGCGCGCGCGCATGTGTAAGGTTTTAT...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCAATGGAGACCACCGCTaGGTCACCCAGGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSNGDHR*VTQASL
Trigger: GAGGGAAGCCTGGGTGACTCAGCGGTGGTCTCCATT...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCCCAGGTCCCTCTCGGTaGGGACACACAGACCCTCAA +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGPGPSR*GHTDPQ
Trigger: TTGAGGGTCTGTGTGTCCTCACCGAGAGGGACCTGG...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCGCTCCTCCTGGCCTCTaGCTGTGGCACAATGCCATG +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGAPPGL*LWHNAM
Trigger: CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGC...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCCGGCTGTGCACATACTaGTCCTCCTGGCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGRLCTY*SSWPLP
Trigger: AGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCG...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGGTCTCCGGCAGAACCTaGCGAGGCTGCCGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGVSGRT*RGCRAA
Trigger: CGCCGCCCGGCAGCCTCGGCAGGTTCTGCCGGAGAC...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000425103.5
CDS-3UTR CCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTAGGTGGAGCTGGCGCTaGAGCACATCTTTCCGCGGA +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPARWSWR*STSFRG
Trigger: TCCGCGGAAAGATGTGCTCCAGCGCCAGCTCCACCT...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCCTGTCTCTTCCGAGGTaGAGCTGGCGCTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSLSLPR*SWRWST
Trigger: TGTGCTCCAGCGCCAGCTCCACCTCGGAAGAGACAG...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACATGCCCAAATGAGTGGTaGAGCTGTCTAGAGCGCATC +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATCPNEW*SCLERI
Trigger: GATGCGCTCTAGACAGCTTCACCACTCATTTGGGCA...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCAGGAGCGGATCGCCATaGACAGACGCGACTCACAAG +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSRSGSP*TDATHK
Trigger: CTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCT...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCATAAAACCTTACACATaGGCGCGCGCACGCGCGCAC +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGIKPYT*ARARAH
Trigger: GTGCGCGCGTGCGCGCGCGCATGTGTAAGGTTTTAT...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACATTTTGTGTGACTAGGTaGTACGACTGCCCACTCCCC +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATFCVTR*YDCPLP
Trigger: GGGGAGTGGGCAGTCGTACCACCTAGTCACACAAAA...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTCTCGCTTCCTCCTCCTaGGGACAGTTCGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPALASSS*GQFGCR
Trigger: TCTGCATCCGAACTGTCCCCAGGAGGAGGAAGCGAG...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCAGAGCAGGTAAGGGGTaGGGTATGCACCCTTACCCC +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSRAGKG*GMHPYP
Trigger: GGGGTAAGGGTGCATACCCCACCCCTTACCTGCTCT...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTGCCTTATCAGGCTCCTaGAGGGTCTCCAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPAALSGS*RVSSSA
Trigger: AGCTGAACTGGAGACCCTTCAGGAGCCTGATAAGGC...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCCCACAGATGGTACTCTaGCCTCCGCACAGCCTTATC +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGPQMVL*PPHSLI
Trigger: GATAAGGCTGTGCGGAGGTCAGAGTACCATCTGTGG...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTGTCCCTCCCACAGATaGTACTCTGACCTCCGCACA +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSCPSHR*YSDLRT
Trigger: TGTGCGGAGGTCAGAGTACCATCTGTGGGAGGGACA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACACACATTGAGGCCAAATaGAAGTCTCCGGCAGAACCT +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATHIEAK*KSPAEP
Trigger: AGGTTCTGCCGGAGACTTCCATTTGGCCTCAATGTG...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425103.5
CDS-3UTR TCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACATCCTTGCATTGTTTCTaGGGCACCAGGATCCAACAT +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATSLHCF*GTRIQH
Trigger: ATGTTGGATCCTGGTGCCTCAGAAACAATGCAAGGA...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACATCCCCACTCTTCGGCTaGTCATTCTGTTCAAATGAC +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATSPLFG*SFCSND
Trigger: GTCATTTGAACAGAATGATCAGCCGAAGAGTGGGGA...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTGAAATTGGGCGAAAGTaGGTCCGAGGAGAGATCCGA +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPAEIGRK*VRGEIR
Trigger: TCGGATCTCTCCTCGGACTCACTTTCGCCCAATTTC...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACATTCCACGGATGCTCATaGGTAAAAGGAAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATFHGCS*VKGSWS
Trigger: ACTCCAGCTTCCTTTTACTCATGAGCATCCGTGGAA...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTTTTGTGTGACTAGGTaGTACGACTGCCCACTCCCC +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSFCVTR*YDCPLP
Trigger: GGGGAGTGGGCAGTCGTACCACCTAGTCACACAAAA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCAGACTTCCTTTTGTGTaGCTAGGTGGTACGACTGCC +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGRLPFV*LGGTTA
Trigger: GGCAGTCGTACCACCTAGTCACACAAAAGGAAGTCT...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCAGACTTCCTTTTGTGTaGCTAGGTGGTACGACTGCC +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSRLPFV*LGGTTA
Trigger: GGCAGTCGTACCACCTAGTCACACAAAAGGAAGTCT...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTCTCAGATTCAAATTCTaGCTCGCTTCCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPALRFKF*LASSSW
Trigger: CCAGGAGGAGGAAGCGAGTCAGAATTTGAATCTGAG...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGCTCGCCTCCGCCTTCTaGGCCTGTCTCTTCCGAGGT +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGLASAF*ACLFRG
Trigger: ACCTCGGAAGAGACAGGCTCAGAAGGCGGAGGCGAG...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTAGATTGCCAAGGTCCTaGAGGAATAAGCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPARLPRS*RNKPSA
Trigger: TGCTGAGGGCTTATTCCTGCAGGACCTTGGCAATCT...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTGGGGACAGTTCGGATaGAGAAATTGGGCGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSWGQFG*RNWAKV
Trigger: CACTTTCGCCCAATTTCTGCATCCGAACTGTCCCCA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTGGGGACAGTTCGGATaGAGAAATTGGGCGAAAGTG +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGWGQFG*RNWAKV
Trigger: CACTTTCGCCCAATTTCTGCATCCGAACTGTCCCCA...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTTCACCTGTGGAAGGTaGTGCATCTTCTCACCTGTG +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSFTCGR*CIFSPV
Trigger: CACAGGTGAGAAGATGCAGCACCTTCCACAGGTGAA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTCGCTTCATACCACAGTaGGTTTCAGCGTTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPARFIPQ*VSAFAN
Trigger: GTTGGCAAACGCTGAAACGCACTGTGGTATGAAGCG...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCCACATTGAGGCCAAATaGAAGTCTCCGGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSHIEAK*KSPAEL
Trigger: CAGTTCTGCCGGAGACTTCCATTTGGCCTCAATGTG...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307659.6
CDS-3UTR CCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCGAAGGTCTTTCAGTCTaGAGCAGAGCTCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSEGLSV*SRAPPL
Trigger: TAGTGGAGGAGCTCTGCTCCAGACTGAAAGACCTTC...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACATCTCATGCACAGTGGTaGGTACTTCACTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATSHAQW*VLHCFF
Trigger: AAAGAAGCAGTGAAGTACCCACCACTGTGCATGAGA...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCCAAGCAGGTGTGAATTaGGCACTGTGCTGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSQAGVN*ALCCLR
Trigger: TCTTAGACAGCACAGTGCTCAATTCACACCTGCTTG...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTCTGAAAAGAGCTCTTaGTTGCCAGCAAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSSEKSS*LPASRC
Trigger: ACACCTGCTTGCTGGCAATCAAGAGCTCTTTTCAGA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCCTTCTTCCAAAGGTTTaGGATCTGCCTGCGGATCTT +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSLLPKV*DLPADL
Trigger: AAGATCCGCAGGCAGATCTCAAACCTTTGGAAGAAG...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTTTCATCTCTGTTGCTaGAAGCCTCTGAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGFHLCC*KPLSFS
Trigger: GCTGAAGCTCAGAGGCTTTCAGCAACAGAGATGAAA...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCGGTCTTTTCCTTCAGTaGTCCCAGGATCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSGLFLQ*SQDLFS
Trigger: GGAGAAAAGATCCTGGGAGCACTGAAGGAAAAGACC...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCGCTATGGAAATGCAATaGGCTTCATACCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSAMEMQ*ASYHSA
Trigger: CGCACTGTGGTATGAAGCGCATTGCATTTCCATAGC...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTTCCTGGAAAGGGGCTTaGACAGATGTTACCAGTGTA +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPASWKGA*TDVTSV
Trigger: TACACTGGTAACATCTGTGCAAGCCCCTTTCCAGGA...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTCTCTGGGTGATGAGGTaGCCTTTACTGCATGTCAAA +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPALWVMR*PLLHVK
Trigger: TTTGACATGCAGTAAAGGCCACCTCATCACCCAGAG...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTCTTCTTGCTTACTCTaGAGGTCTTTCAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGSSCLL*RSFSLE
Trigger: CTCCAGACTGAAAGACCTTCAGAGTAAGCAAGAAGA...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTCTTCTTGCTTACTCTaGAGGTCTTTCAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSSSCLL*RSFSLE
Trigger: CTCCAGACTGAAAGACCTTCAGAGTAAGCAAGAAGA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTTGTTCCACACAGTCATaGTTTCTTGCAGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPACSTQS*FLAGKL
Trigger: CAGTTTGCCTGCAAGAAATCATGACTGTGTGGAACA...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGATTCCCACTGGAACTTaGGCCTGCTTCACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMIPTGT*ACFTGA
Trigger: GGCTCCAGTGAAGCAGGCTCAAGTTCCAGTGGGAAT...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTTCTTCCACTGCCTCTaGTGTCAGATCACTTGTATC +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSFFHCL*CQITCI
Trigger: GATACAAGTGATCTGACATCAGAGGCAGTGGAAGAA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAATCAGAACAGAGGATTaGTTTCGGTTTAAAACTGGG +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATIRTED*FRFKTG
Trigger: CCCAGTTTTAAACCGAAATCAATCCTCTGTTCTGAT...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTCCAGACTCAAGCTCTaGTTTTCCATAGTAATGGCC +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSSRLKL*FSIVMA
Trigger: GGCCATTACTATGGAAAATCAGAGCTTGAGTCTGGA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTAGCAGAAGTGGTTGTTaGCACTGCAATGCTAGTAAG +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPASRSGC*HCNASK
Trigger: CTTACTAGCATTGCAGTGTCAACAACCACTTCTGCT...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCCCAGGCATGCTACGCTaGTTTCACAGATTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSPGMLR*FHRLGF
Trigger: AAAACCTAATCTGTGAAATCAGCGTAGCATGCCTGG...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCAATGGGGAGGAGCCGCTaGTTTCTCAGCAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAMGRSR*FLSRPH
Trigger: GTGTGGCCTGCTGAGAAATCAGCGGCTCCTCCCCAT...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTCAGCCTTTTCACCGTaGTTCAAAGAAAGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSSAFSP*FKESLL
Trigger: AAGCAGGCTTTCTTTGAAGCACGGTGAAAAGGCTGA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTATCCGACTTTCTCCTTaGATTGTTTCTGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPAIRLSP*IVSEAP
Trigger: TGGTGCCTCAGAAACAATGCAAGGAGAAAGTCGGAT...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCATTGCACGTTCCCCTTaGAACTCCATACCATCTAAC +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGIARSP*NSIPSN
Trigger: GTTAGATGGTATGGAGTTGCAAGGGGAACGTGCAAT...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCATTGCACGTTCCCCTTaGAACTCCATACCATCTAAC +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSIARSP*NSIPSN
Trigger: GTTAGATGGTATGGAGTTGCAAGGGGAACGTGCAAT...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCAAAACTGAGCCAGATTaGCAAGGTCCTGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSKTEPD*QGPAGI
Trigger: TATTCCTGCAGGACCTTGGCAATCTGGCTCAGTTTT...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCACTGGGGCTGAAAGATaGAATCCCTTCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSTGAER*NPFRFK
Trigger: TTTGAACCTGAAGGGATTGCATCTTTCAGCCCCAGT...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTACTGGGGCTGAAAGATaGAATCCCTTCAGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPATGAER*NPFRFK
Trigger: TTTGAACCTGAAGGGATTGCATCTTTCAGCCCCAGT...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACACCAGGGATTCATTCATaGTACATTCCAAACACTGAT +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATPGIHS*YIPNTD
Trigger: ATCAGTGTTTGGAATGTAGCATGAATGAATCCCTGG...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCATTTGTGAATCCCTTTaGTCACTTCGAATCCGTCCC +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGICESL*SLRIRP
Trigger: GGGACGGATTCGAAGTGAGCAAAGGGATTCACAAAT...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTTCTTGCAGGCAAACTaGTTTCTCAGAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSFLQAN*FLRKWW
Trigger: CCACCACTTTCTGAGAAACCAGTTTGCCTGCAAGAA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTTTTCTCATGCACAGTaGTGGGTACTTCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGFSHAQ*WVLHCF
Trigger: GAAGCAGTGAAGTACCCACCACTGTGCATGAGAAAA...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTAGCCATCTCCATGTaGACTTTCATTACATACTTG +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATVAISM*TFITYL
Trigger: CAAGTATGTAATGAAAGTCCACATGGAGATGGCTAC...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCCAACACCACATATCCTaGGGTGAAACACTTCACTGT +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGQHHIS*GETLHC
Trigger: ACAGTGAAGTGTTTCACCCCAGGATATGTGGTGTTG...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCGTACATTCAGAATCCTaGAAAGGGGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGVHSES*KGACTD
Trigger: ATCTGTGCAAGCCCCTTTCCAGGATTCTGAATGTAC...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGATTCCCACTGGAACTTaGGCCTGCTTCACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGIPTGT*ACFTGA
Trigger: GGCTCCAGTGAAGCAGGCTCAAGTTCCAGTGGGAAT...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGGCATTTCTACAAAATaGCCATCAATGAAAGTACCT +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATGISTK*PSMKVP
Trigger: AGGTACTTTCATTGATGGTCATTTTGTAGAAATGCC...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGGCCAGCAAGCAGGTGTaGATTGAGCACTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGASKQV*IEHCAV
Trigger: GACAGCACAGTGCTCAATTCACACCTGCTTGCTGGC...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCCCCTTCAGGTTCAAATaGGCATTCTACATGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSPFRFK*AFYMKN
Trigger: GTTCTTCATGTAGAATGCTCATTTGAACCTGAAGGG...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGACTCGCCTCCGCCTTCTaGGCCTGTCTCTTCCGAGGT +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARLASAF*ACLFRG
Trigger: ACCTCGGAAGAGACAGGCTCAGAAGGCGGAGGCGAG...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGCTTCTCACCTGTGTCTaGGGAAGTGTGCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMLLTCV*GSVHLC
Trigger: GCAAAGGTGCACACTTCCTCAGACACAGGTGAGAAG...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCAACCACTGCTGCTACTaGTACTACTTCCAGTATGAA +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGNHCCY*YYFQYE
Trigger: TTCATACTGGAAGTAGTAGCAGTAGCAGCAGTGGTT...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTAACCACTGCTGCTACTaGTACTACTTCCAGTATGAA +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPANHCCY*YYFQYE
Trigger: TTCATACTGGAAGTAGTAGCAGTAGCAGCAGTGGTT...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCAAAAGAGCTCTTGATTaGCAGCAAGCAGGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSKRALD*QQAGVN
Trigger: ATTCACACCTGCTTGCTGGCAATCAAGAGCTCTTTT...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTCTTCGACTTGAAAGTTaGCACAAGCTCCTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPALRLES*HKLLVS
Trigger: ACTTACTAGGAGCTTGTGGCAACTTTCAAGTCGAAG...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCACCACACACAGAACTTaGCCAGAACATTCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGTTHRT*PEHSLK
Trigger: TTTGAGAGAATGTTCTGGGCAAGTTCTGTGTGTGGT...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTTCAGTGCTATGGAAATaGAATGCGCTTCATACCACA +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPASVLWK*NALHTT
Trigger: TGTGGTATGAAGCGCATTGCATTTCCATAGCACTGA...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTATTCTGTTGGTATCTaGAGGGGATTTTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSYSVGI*RGFSLQ
Trigger: CTGGAGTGAAAATCCCCTCCAGATACCAACAGAATA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTTCTACTGTTTTGCTaGCAAGTTTCATCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATVLLFC*QVSSCK
Trigger: TTTGCAAGATGAAACTTGCCAGCAAAACAGTAGAAC...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCCTGTCCCGAAGAAACTaGATTATCTTCATAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSLSRRN*IIFISR
Trigger: CCTGCTTATGAAGATAATCCAGTTTCTTCGGGACAG...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGATAAACCCTAACACGTaGGAAGATCGACCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGINPNT*EDRPGG
Trigger: CCCGCCGGGTCGATCTTCCCACGTGTTAGGGTTTAT...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCGGTACTTCAGTGCTATaGAAATGCAATGCGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGGTSVL*KCNALH
Trigger: ATGAAGCGCATTGCATTTCCATAGCACTGAAGTACC...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGGCTTGCACAGCTGTTTaGCAGAACCACTGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGACTAV*QNHCCY
Trigger: GTAGCAGCAGTGGTTCTGTCAAACAGCTGTGCAAGC...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGCCAGGATCTTCGACTTaGAAGTTGCCACAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMPGSST*KLPQAP
Trigger: AGGAGCTTGTGGCAACTTTCAAGTCGAAGATCCTGG...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTTTACTCTGGTGTACGTaGAATCAGAACAATACAACC +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPALLWCT*NQNNTT
Trigger: GGTTGTATTGTTCTGATTTCACGTACACCAGAGTAA...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCGCAATGAGAGCTAAATaGCCTCCATCTAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGAMRAK*PPSRTN
Trigger: ATTTGTTCTAGATGGAGGTCATTTAGCTCTCATTGC...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTGGTTTGAGATCTGCCTaGGGATCTTCAAATATATCA +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPAGLRSA*GSSNIS
Trigger: TGATATATTTGAAGATCCGCAGGCAGATCTCAAACC...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCGGTTTGAGATCTGCCTaGGGATCTTCAAATATATCA +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGGLRSA*GSSNIS
Trigger: TGATATATTTGAAGATCCGCAGGCAGATCTCAAACC...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTAGAACAAAGCCTAAATaGTCCAAAGCTGAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPARTKPK*SKAEVS
Trigger: AGAGACTTCAGCTTTGGAGCATTTAGGCTTTGTTCT...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCAGAACAAAGCCTAAATaGTCCAAAGCTGAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSRTKPK*SKAEVS
Trigger: AGAGACTTCAGCTTTGGAGCATTTAGGCTTTGTTCT...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTGGTGTAAATGTAACTaGAGTATGAGAGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGWCKCN*SMRAGK
Trigger: CTTACCTGCTCTCATACTGCAGTTACATTTACACCA...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTTGGTGTAAATGTAACTaGAGTATGAGAGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPAWCKCN*SMRAGK
Trigger: CTTACCTGCTCTCATACTGCAGTTACATTTACACCA...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCAGGAAGTGTGCACCTTTaGCACCTGGAGCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAGSVHL*HLEPFP
Trigger: AGGAAAGGGCTCCAGGTGGCAAAGGTGCACACTTCC...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCAGTGTCTGAGGAAGTGTaGACCTTTGCCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAVSEEV*TFATWS
Trigger: GCTCCAGGTGGCAAAGGTGCACACTTCCTCAGACAC...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCACCGAGTGTAAATCATaGCATCAATGCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGTECKS*HQCHIS
Trigger: AGAAATGTGGCATTGATGCCATGATTTACACTCGGT...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCATTGAGCCTGCTTCACTaGAGCCAGAAGACCACGAGC +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAALSLLH*SQKTTS
Trigger: GCTCGTGGTCTTCTGGCTCCAGTGAAGCAGGCTCAA...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCAGCAAAACTGTTTCCTaGGGTCATAAAGACATCTGT +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSSKTVS*GHKDIC
Trigger: ACAGATGTCTTTATGACCCCAGGAAACAGTTTTGCT...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGTCCTTGCATTGTTTCTaGGGCACCAGGATCCAACAT +
Preference number: 4 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMSLHCF*GTRIQH
Trigger: ATGTTGGATCCTGGTGCCTCAGAAACAATGCAAGGA...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTTTCATCTACATAATTTaGCGAGACTCTAGGAACTAC +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPAFIYII*RDSRNY
Trigger: GTAGTTCCTAGAGTCTCGTCAAATTATGTAGATGAA...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGCTCAGATTCAAATTCTaGCTCGCTTCCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGLRFKF*LASSSW
Trigger: CCAGGAGGAGGAAGCGAGTCAGAATTTGAATCTGAG...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCATTAACAGGTCTCACTaGAGAGTAATTTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSINRSH*RVIFHH
Trigger: GTGATGGAAAATTACTCTTCAGTGAGACCTGTTAAT...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCATGCCCAAATGAGTGGTaGAGCTGTCTAGAGCGCATC +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAACPNEW*SCLERI
Trigger: GATGCGCTCTAGACAGCTTCACCACTCATTTGGGCA...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTAGAAAACAAAAAGATTaGGCTTTGTGTACCATCCAC +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPARKQKD*ALCTIH
Trigger: GTGGATGGTACACAAAGCTCAATCTTTTTGTTTTCT...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCAGAAAACAAAAAGATTaGGCTTTGTGTACCATCCAC +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGRKQKD*ALCTIH
Trigger: GTGGATGGTACACAAAGCTCAATCTTTTTGTTTTCT...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCCTGATACAAAGACCATaGACTGATTCAGACAATTCT +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSLIQRP*TDSDNS
Trigger: AGAATTGTCTGAATCAGTGCATGGTCTTTGTATCAG...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAAGGAGCGGATCGCCATaGACAGACGCGACTCACAAG +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARRSGSP*TDATHK
Trigger: CTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACTCCCTGATTCCCACTaGAACTTGAGCCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAALPDSH*NLSLLH
Trigger: GTGAAGCAGGCTCAAGTTCCAGTGGGAATCAGGGAG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACAGCATCACCGGAGCTaGATGAACAGCACTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAQHHRS*MNSTPK
Trigger: TTTGGGAGTGCTGTTCATCCAGCTCCGGTGATGCTG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCGTTCTACTGTTTTGCTaGCAAGTTTCATCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSVLLFC*QVSSCK
Trigger: TTTGCAAGATGAAACTTGCCAGCAAAACAGTAGAAC...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGTTCGGATGCAGAAATTaGGCGAAAGTGAGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGFGCRN*AKVSPR
Trigger: CCTCGGACTCACTTTCGCCCAATTTCTGCATCCGAA...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGACAGCACTCCCAAAACTaGGCCAGATTGCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARQHSQN*ARLPRS
Trigger: GGACCTTGGCAATCTGGCTCAGTTTTGGGAGTGCTG...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACTCCTGGGAATCCAGTaGTGTCTGAGCACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAALLGIQ*CLSTLF
Trigger: GAAAAGAGTGCTCAGACATCACTGGATTCCCAGGAG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTACCATCTAACACTATaGAACATTCTGCCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSYHLTL*NILPQN
Trigger: ATTTTGAGGCAGAATGTTGCATAGTGTTAGATGGTA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTGTAAAACAGAATTACTaGATTGCACTTCAAACACTG +
Preference number: 4 (lower is better)
Translates to: EPEERIAMHRRDSQDAPAVKQNY*IALQTL
Trigger: CAGTGTTTGAAGTGCAATGCAGTAATTCTGTTTTAC...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTTCTTCCTCGCATTGTaGCATTATTTTACAATTTGC +
Preference number: 4 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGFFLAL*HYFTIC
Trigger: GCAAATTGTAAAATAATGGCACAATGCGAGGAAGAA...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGGCTATGGAAATGCAATaGGCTTCATACCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGAMEMQ*ASYHSA
Trigger: CGCACTGTGGTATGAAGCGCATTGCATTTCCATAGC...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGGGGAGAGAGTCTAACTaGAGAGTCTCCTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGGRESN*RVSSKT
Trigger: AGTTTTGGAGGAGACTCTCCAGTTAGACTCTCTCCC...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCATTCGGATGCAGAAATTaGGCGAAAGTGAGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAFGCRN*AKVSPR
Trigger: CCTCGGACTCACTTTCGCCCAATTTCTGCATCCGAA...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCCAACTTGAGAAGGAATaGGAATATTTGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSQLEKE*EYLLHL
Trigger: AAGATGAAGCAAATATTCCCATTCCTTCTCAAGTTG...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAACATACTGCTCCTCCTaGCCTCTGCCTGTGGCACAA +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARTYCSS*PLPVAQ
Trigger: TTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGAGAACAAATGTAACCTaGGCACTTGCTCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGRTNVT*ALALPR
Trigger: CCGTGGAAGAGCAAGTGCCCAGGTTACATTTGTTCT...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGTGCTTCTTTCCTTGGTaGCTTCACTTTCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGCFFPW*LHFHCC
Trigger: GCAACAGTGAAAGTGAAGTCACCAAGGAAAGAAGCA...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAATCACCGGAGCTGGATaGACAGCACTCCCAAAACTG +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARITGAG*TALPKL
Trigger: CAGTTTTGGGAGTGCTGTTCATCCAGCTCCGGTGAT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCATCTGAAAAGAGCTCTTaGTTGCCAGCAAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAASEKSS*LPASRC
Trigger: ACACCTGCTTGCTGGCAATCAAGAGCTCTTTTCAGA...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGCCCTTCAGGTTCAAATaGGCATTCTACATGAAGAAC +
Preference number: 4 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMPFRFK*AFYMKN
Trigger: GTTCTTCATGTAGAATGCTCATTTGAACCTGAAGGG...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTCCAGGTCCCTCTCGGTaGGGACACACAGACCCTCAA +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFPGPSR*GHTDPQ
Trigger: TTGAGGGTCTGTGTGTCCTCACCGAGAGGGACCTGG...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACAGCAGTGTCTGCAATaGGAGCTAAATGACCTCCAT +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAQQCLQ*ELNDLH
Trigger: ATGGAGGTCATTTAGCTCTCATTGCAGACACTGCTG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGCACCACAAAGAACCCTaGATGGGGTTTTGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGHHKEP*MGFWCK
Trigger: TTTACACCAAAACCCCATGCAGGGTTCTTTGTGGTG...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGCGTGTTTCTTCTGAATaGGACCATGGACTACAAGTT +
Preference number: 4 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMRVSSE*DHGLQV
Trigger: AACTTGTAGTCCATGGTCCCATTCAGAAGAAACACG...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGCCCTGCATGGGGTTTTaGTGTAAATGTAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGPCMGF*CKCNCS
Trigger: ACTGCAGTTACATTTACACCAAAACCCCATGCAGGG...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCATGCACCTTTGCCACCTaGAGCCCTTTCCTAATAAAC +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAACTFAT*SPFLIN
Trigger: GTTTATTAGGAAAGGGCTCCAGGTGGCAAAGGTGCA...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGGGTACTTCAGTGCTATaGAAATGCAATGCGCTTCAT +
Preference number: 4 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMGTSVL*KCNALH
Trigger: ATGAAGCGCATTGCATTTCCATAGCACTGAAGTACC...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACAAAATGACCATCAATaGAAGTACCTGCTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAQNDHQ*KYLLRG
Trigger: ACCTCGCAGCAGGTACTTTCATTGATGGTCATTTTG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAGCCTTATCAGGCTCCTaGAGGGTCTCCAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGALSGS*RVSSSA
Trigger: AGCTGAACTGGAGACCCTTCAGGAGCCTGATAAGGC...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACTCACTAGAAGCAAATaGTCTTTTCTCCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAALTRSK*SFLQAL
Trigger: GAGAGCCTGGAGAAAAGAGCATTTGCTTCTAGTGAG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAACTAGGTGGTACGACTaGCCACTCCCCATCACTATT +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARTRWYD*PLPITI
Trigger: AATAGTGATGGGGAGTGGGCAGTCGTACCACCTAGT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGCCAGGGATTCATTCATaGTACATTCCAAACACTGAT +
Preference number: 4 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMPGIHS*YIPNTD
Trigger: ATCAGTGTTTGGAATGTAGCATGAATGAATCCCTGG...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCACTGCCTGTGGCACAATaGCATGAGAGCCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSLPVAQ*HESRRS
Trigger: GCTCCTCCGGCTCTCATGGCATTGTGCCACAGGCAG...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAGTGTCTGAGGAAGTGTaGACCTTTGCCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGVSEEV*TFATWS
Trigger: GCTCCAGGTGGCAAAGGTGCACACTTCCTCAGACAC...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAACCTGTGGAAGGTGCTaGATCTTCTCACCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARTCGRC*IFSPVS
Trigger: AGACACAGGTGAGAAGATGCAGCACCTTCCACAGGT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCATTCTTGCAGGCAAACTaGTTTCTCAGAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAFLQAN*FLRKWW
Trigger: CCACCACTTTCTGAGAAACCAGTTTGCCTGCAAGAA...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGCTGTCCCGAAGAAACTaGATTATCTTCATAAGCAGG +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGLSRRN*IIFISR
Trigger: CCTGCTTATGAAGATAATCCAGTTTCTTCGGGACAG...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCACTGTCTCTTCCGAGGTaGAGCTGGCGCTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSLSLPR*SWRWST
Trigger: TGTGCTCCAGCGCCAGCTCCACCTCGGAAGAGACAG...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGCTACTACTTCCAGTATaGATGTTCCTTTCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGLLLPV*MFLSAF
Trigger: AAAGGCTGAAAGGAACATTCATACTGGAAGTAGTAG...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTCAGCACTCCCAAAACTaGGCCAGATTGCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFQHSQN*ARLPRS
Trigger: GGACCTTGGCAATCTGGCTCAGTTTTGGGAGTGCTG...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGACTTCTTCCAAAGGTTTaGGATCTGCCTGCGGATCTT +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARLLPKV*DLPADL
Trigger: AAGATCCGCAGGCAGATCTCAAACCTTTGGAAGAAG...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAGAATCCAGTGATGTCTaGGCACTCTTTTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARESSDV*ALFSIP
Trigger: TGGGATGGAAAAGAGTGCTCAGACATCACTGGATTC...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGCTCTCAAACACAAAATaGGATCGAAGCTATACTACA +
Preference number: 4 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMLSNTK*DRSYTT
Trigger: TGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAG...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGGTTTCGAATCTCTCGTaGCTTGTGTCTTACTTTAAC +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGVSNLS*LVSYFN
Trigger: GTTAAAGTAAGACACAAGGCACGAGAGATTCGAAAC...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAGGTCTTTTCCTTCAGTaGTCCCAGGATCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARGLFLQ*SQDLFS
Trigger: GGAGAAAAGATCCTGGGAGCACTGAAGGAAAAGACC...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGATCAATGAAAGTACCTaGTGCGAGGTATGTTTTATG +
Preference number: 4 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMINEST*CEVCFM
Trigger: CATAAAACATACCTCGCAGCAGGTACTTTCATTGAT...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAAAGGGTTTCCATAACTaGCTGTGCCCAGGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARKGFHN*LCPGAK
Trigger: TTTTGCTCCTGGGCACAGGCAGTTATGGAAACCCTT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGCAAAGGTTTGAGATCTaGCTGCGGATCTTCAAATAT +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGQRFEI*LRIFKY
Trigger: ATATTTGAAGATCCGCAGGCAGATCTCAAACCTTTG...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGAGCAAAACTGTTTCCTaGGGTCATAAAGACATCTGT +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGSKTVS*GHKDIC
Trigger: ACAGATGTCTTTATGACCCCAGGAAACAGTTTTGCT...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAAGAACAAATGTAACCTaGGCACTTGCTCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARRTNVT*ALALPR
Trigger: CCGTGGAAGAGCAAGTGCCCAGGTTACATTTGTTCT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGACAAAATGACCATCAATaGAAGTACCTGCTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARQNDHQ*KYLLRG
Trigger: ACCTCGCAGCAGGTACTTTCATTGATGGTCATTTTG...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAGATGTGGAAAACTCATaGCTCTACCCGCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSDVENS*LYPPQP
Trigger: GGGTTGGGGCGGGTAGAGTCATGAGTTTTCCACATC...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGATACTGCCTGCCCAAATaGGTGGTGAAGCTGTCTAGA +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGYCLPK*VVKLSR
Trigger: TCTAGACAGCTTCACCACTCATTTGGGCAGGCAGTA...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAGCTTCAAAGAAAGCCTaGTTTGCCCATTCCGCCCTT +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGASKKA*FAHSAL
Trigger: AAGGGCGGAATGGGCAAAGCAGGCTTTCTTTGAAGC...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGAATGAAAGTACCTGCTaGGAGGTATGTTTTATGAAG +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGNESTC*EVCFMK
Trigger: CTTCATAAAACATACCTCGCAGCAGGTACTTTCATT...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAAAAACTGAGCCAGATTaGCAAGGTCCTGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARKTEPD*QGPAGI
Trigger: TATTCCTGCAGGACCTTGGCAATCTGGCTCAGTTTT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACACAGAATTTGTGTCTaGCATCTTTGTCCAAATGTC +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAHRICV*HLCPNV
Trigger: GACATTTGGACAAAGATGGCAGACACAAATTCTGTG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGAGGAAACTGACAACCTaGTTTGCAACCACAAAAATT +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGRKLTT*FATTKI
Trigger: AATTTTTGTGGTTGCAAAGCAGGTTGTCAGTTTCCT...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGCTGCCTGTGGCACAATaGCATGAGAGCCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLLPVAQ*HESRRS
Trigger: GCTCCTCCGGCTCTCATGGCATTGTGCCACAGGCAG...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAACCTGTGGAAGGTGCTaGATCTTCTCACCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGTCGRC*IFSPVS
Trigger: AGACACAGGTGAGAAGATGCAGCACCTTCCACAGGT...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCAATCCACGGACAAAAATaGTATGTGTTTTGCAGACTC +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAIHGQK*YVFCRL
Trigger: GAGTCTGCAAAACACATAGCATTTTTGTCCGTGGAT...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCATTGAGCCTGCTTCACTaGAGCCAGAAGACCACGAGC +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSLSLLH*SQKTTS
Trigger: GCTCGTGGTCTTCTGGCTCCAGTGAAGCAGGCTCAA...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGGTCTGTTTCGGTATGTaGTCTCTAGTTTACTTTTTC +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGVCFGM*SLVYFF
Trigger: GAAAAAGTAAACTAGAGACCACATACCGAAACAGAC...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACACCAGGATCCAACATaGATTGATCAATATCCACTT +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAHQDPT*IDQYPL
Trigger: AAGTGGATATTGATCAATCCATGTTGGATCCTGGTG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCATGTCCCTCCCACAGATaGTACTCTGACCTCCGCACA +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSCPSHR*YSDLRT
Trigger: TGTGCGGAGGTCAGAGTACCATCTGTGGGAGGGACA...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCAGTGTTTTCTTTATCTTaGGCTACATCCCAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAVFSLS*ATSQGL
Trigger: TAAACCCTGGGATGTAGCCCAAGATAAAGAAAACAC...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGACACACCCCAAATCCTTaGCTTCTTCAGTTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARHTPNP*LLQLAR
Trigger: TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTG...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGACCCTGCATGGGGTTTTaGTGTAAATGTAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARPCMGF*CKCNCS
Trigger: ACTGCAGTTACATTTACACCAAAACCCCATGCAGGG...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR CAA 72 bp TTTGTGTACCATCCACGGACAAAAATGCTATGTGTTTaGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FVYHPRTKMLCV*QTQVVVPACAG
Trigger: CCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACATAGCATTTTTGTCCGTGGATGGTACACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCATTCATCTACATAATTTaGCGAGACTCTAGGAACTAC +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAFIYII*RDSRNY
Trigger: GTAGTTCCTAGAGTCTCGTCAAATTATGTAGATGAA...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACTACATTCCAAACACTaGTTTTGCTTTCCTACTGAA +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAALHSKH*FCFPTE
Trigger: TTCAGTAGGAAAGCAAAATCAGTGTTTGGAATGTAG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACACCCATTCTTGATTTaGCAACACAATCTAGTCTAT +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAHPFLI*QHNLVY
Trigger: ATAGACTAGATTGTGTTGTCAAATCAAGAATGGGTG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACAAATGGAGACCACCGCTaGGTCACCCAGGCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITNGDHR*VTQASL
Trigger: GAGGGAAGCCTGGGTGACTCAGCGGTGGTCTCCATT...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAGTATTTGGTGAGTCTTaGAAAGCACACCTCTGCGGT +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGVFGES*KAHLCG
Trigger: ACCGCAGAGGTGTGCTTTTCAAGACTCACCAAATAC...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGACAGCAGTGTCTGCAATaGGAGCTAAATGACCTCCAT +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGQQCLQ*ELNDLH
Trigger: ATGGAGGTCATTTAGCTCTCATTGCAGACACTGCTG...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACAATGGGGAGGAGCCGCTaGTTTCTCAGCAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITMGRSR*FLSRPH
Trigger: GTGTGGCCTGCTGAGAAATCAGCGGCTCCTCCCCAT...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCAAATGAAAGTACCTGCTaGGAGGTATGTTTTATGAAG +
Preference number: 4 (lower is better)
Translates to: GAADFSAGHTTFFPSKAANESTC*EVCFMK
Trigger: CTTCATAAAACATACCTCGCAGCAGGTACTTTCATT...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAAAAAGAGCTCTTGATTaGCAGCAAGCAGGTGTGAAT +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARKRALD*QQAGVN
Trigger: ATTCACACCTGCTTGCTGGCAATCAAGAGCTCTTTT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTCAAGAAGCGGCTAGCTaGAGCAGCCAAAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFQEAAS*SSQRFL
Trigger: GAGAAATCTTTGGCTGCTGCAGCTAGCCGCTTCTTG...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACAGCTCCTCCTGGCCTCTaGCTGTGGCACAATGCCATG +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITAPPGL*LWHNAM
Trigger: CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGC...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGATCCTGGAAAGGGGCTTaGACAGATGTTACCAGTGTA +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGSWKGA*TDVTSV
Trigger: TACACTGGTAACATCTGTGCAAGCCCCTTTCCAGGA...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAAGTCTCCGGCAGAACTaGTTGTCTTCATTCTCAACG +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGSLRQN*LSSFST
Trigger: CGTTGAGAATGAAGACAACCAGTTCTGCCGGAGACT...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307659.6
CDS-3UTR CCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGCTCGCTTCCTCCTCCTaGGGACAGTTCGGATGCAGA +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLLASSS*GQFGCR
Trigger: TCTGCATCCGAACTGTCCCCAGGAGGAGGAAGCGAG...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGCAACTTGAGAAGGAATaGGAATATTTGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGQLEKE*EYLLHL
Trigger: AAGATGAAGCAAATATTCCCATTCCTTCTCAAGTTG...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTAGGTGGAGCTGGCGCTaGAGCACATCTTTCCGCGGA +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIRWSWR*STSFRG
Trigger: TCCGCGGAAAGATGTGCTCCAGCGCCAGCTCCACCT...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAAGCATTTTCTGCAGTTaGTATTCTGTTGGTATCTGG +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARSIFCS*YSVGIW
Trigger: CCAGATACCAACAGAATATCAACTGCAGAAAATGCT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGATGCTTCTTTCCTTGGTaGCTTCACTTTCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGCFFPW*LHFHCC
Trigger: GCAACAGTGAAAGTGAAGTCACCAAGGAAAGAAGCA...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAATAATGAGGTCCCAGTaGGGTCAATATCCTCATTTA +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARIMRSQ*GQYPHL
Trigger: TAAATGAGGATATTGACCTCACTGGGACCTCATTAT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTGTCTTTAATAACCCCTaGGCTGTAGCCATCTCCATG +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFVFNNP*AVAISM
Trigger: CATGGAGATGGCTACAGCTCAGGGGTTATTAAAGAC...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTTCCCCACTCTTCGGCTaGTCATTCTGTTCAAATGAC +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFSPLFG*SFCSND
Trigger: GTCATTTGAACAGAATGATCAGCCGAAGAGTGGGGA...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGATCCAGACTCAAGCTCTaGTTTTCCATAGTAATGGCC +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGSRLKL*FSIVMA
Trigger: GGCCATTACTATGGAAAATCAGAGCTTGAGTCTGGA...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCACTCCTGGGAATCCAGTaGTGTCTGAGCACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSLLGIQ*CLSTLF
Trigger: GAAAAGAGTGCTCAGACATCACTGGATTCCCAGGAG...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAGCTTCAAAGAAAGCCTaGTTTGCCCATTCCGCCCTT +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSASKKA*FAHSAL
Trigger: AAGGGCGGAATGGGCAAAGCAGGCTTTCTTTGAAGC...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGACACTATGCAACATTCTaGCTCAAAATCTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARHYATF*LKICVL
Trigger: GAGAACACAGATTTTGAGGCAGAATGTTGCATAGTG...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAACTAGGTGGTACGACTaGCCACTCCCCATCACTATT +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSTRWYD*PLPITI
Trigger: AATAGTGATGGGGAGTGGGCAGTCGTACCACCTAGT...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCACAAGAAGCGGCTAGCTaGAGCAGCCAAAGATTTCTC +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSQEAAS*SSQRFL
Trigger: GAGAAATCTTTGGCTGCTGCAGCTAGCCGCTTCTTG...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCACGCTTCATACCACAGTaGGTTTCAGCGTTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSRFIPQ*VSAFAN
Trigger: GTTGGCAAACGCTGAAACGCACTGTGGTATGAAGCG...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAATCCACGGACAAAAATaGTATGTGTTTTGCAGACTC +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARIHGQK*YVFCRL
Trigger: GAGTCTGCAAAACACATAGCATTTTTGTCCGTGGAT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAGAAGGTCTTTCAGTCTaGAGCAGAGCTCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSEGLSV*SRAPPL
Trigger: TAGTGGAGGAGCTCTGCTCCAGACTGAAAGACCTTC...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGACACCAGGATCCAACATaGATTGATCAATATCCACTT +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARHQDPT*IDQYPL
Trigger: AAGTGGATATTGATCAATCCATGTTGGATCCTGGTG...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTGGGAGAGAGTCTAACTaGAGAGTCTCCTCCAAAACT +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFGRESN*RVSSKT
Trigger: AGTTTTGGAGGAGACTCTCCAGTTAGACTCTCTCCC...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAGTGTTTTCTTTATCTTaGGCTACATCCCAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARVFSLS*ATSQGL
Trigger: TAAACCCTGGGATGTAGCCCAAGATAAAGAAAACAC...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACAAGAGCAGGTAAGGGGTaGGGTATGCACCCTTACCCC +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITRAGKG*GMHPYP
Trigger: GGGGTAAGGGTGCATACCCCACCCCTTACCTGCTCT...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTCTCTGGGTGATGAGGTaGCCTTTACTGCATGTCAAA +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFLWVMR*PLLHVK
Trigger: TTTGACATGCAGTAAAGGCCACCTCATCACCCAGAG...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGACATACTGCTCCTCCTaGCCTCTGCCTGTGGCACAA +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLTYCSS*PLPVAQ
Trigger: TTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGT...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGATAAACCCTAACACGTaGGAAGATCGACCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLINPNT*EDRPGG
Trigger: CCCGCCGGGTCGATCTTCCCACGTGTTAGGGTTTAT...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTTGCACCTTTGCCACCTaGAGCCCTTTCCTAATAAAC +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFCTFAT*SPFLIN
Trigger: GTTTATTAGGAAAGGGCTCCAGGTGGCAAAGGTGCA...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGACCCAGGAATGGAAACTaGTACTTCAGTGCTATGGAA +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGPRNGN*YFSAME
Trigger: TTCCATAGCACTGAAGTACCAGTTTCCATTCCTGGG...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGGCTTGCACAGCTGTTTaGCAGAACCACTGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLACTAV*QNHCCY
Trigger: GTAGCAGCAGTGGTTCTGTCAAACAGCTGTGCAAGC...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTCCACAGATGGTACTCTaGCCTCCGCACAGCCTTATC +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIPQMVL*PPHSLI
Trigger: GATAAGGCTGTGCGGAGGTCAGAGTACCATCTGTGG...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAGAATCCAGTGATGTCTaGGCACTCTTTTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSESSDV*ALFSIP
Trigger: TGGGATGGAAAAGAGTGCTCAGACATCACTGGATTC...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTGATGTGGAAAACTCATaGCTCTACCCGCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIDVENS*LYPPQP
Trigger: GGGTTGGGGCGGGTAGAGTCATGAGTTTTCCACATC...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGACTGATACAAAGACCATaGACTGATTCAGACAATTCT +
Preference number: 4 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARLIQRP*TDSDNS
Trigger: AGAATTGTCTGAATCAGTGCATGGTCTTTGTATCAG...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTAGAATCTGTCCATATTaGACGTTCCCCTTGCAACTC +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFRICPY*TFPLQL
Trigger: GAGTTGCAAGGGGAACGTGCAATATGGACAGATTCT...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTTTCCATAACTGCCTGTaGCCAGGAGCAAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFFHNCL*PGAKLF
Trigger: AAACAGTTTTGCTCCTGGGCACAGGCAGTTATGGAA...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTGGAAGTGTGCACCTTTaGCACCTGGAGCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIGSVHL*HLEPFP
Trigger: AGGAAAGGGCTCCAGGTGGCAAAGGTGCACACTTCC...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGACGTGTTTCTTCTGAATaGGACCATGGACTACAAGTT +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGRVSSE*DHGLQV
Trigger: AACTTGTAGTCCATGGTCCCATTCAGAAGAAACACG...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTCACACCCCAAATCCTTaGCTTCTTCAGTTAGCAAGA +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFHTPNP*LLQLAR
Trigger: TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTG...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCACACCACACAGGGATGTaGAAAACTCATGACTCTACC +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSHHTGM*KTHDST
Trigger: GGTAGAGTCATGAGTTTTCCACATCCCTGTGTGGTG...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTTTCCCTCTTCAGGCATaGCTAATGAATCAACATCCT +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFFPLQA*LMNQHP
Trigger: AGGATGTTGATTCATTAGTCATGCCTGAAGAGGGAA...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCATGTTCCACACAGTCATaGTTTCTTGCAGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSCSTQS*FLAGKL
Trigger: CAGTTTGCCTGCAAGAAATCATGACTGTGTGGAACA...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACAATCACCGGAGCTGGATaGACAGCACTCCCAAAACTG +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITITGAG*TALPKL
Trigger: CAGTTTTGGGAGTGCTGTTCATCCAGCTCCGGTGAT...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTGAAATTGGGCGAAAGTaGGTCCGAGGAGAGATCCGA +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIEIGRK*VRGEIR
Trigger: TCGGATCTCTCCTCGGACTCACTTTCGCCCAATTTC...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAAGCAGAAGTGGTTGTTaGCACTGCAATGCTAGTAAG +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSSRSGC*HCNASK
Trigger: CTTACTAGCATTGCAGTGTCAACAACCACTTCTGCT...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAAAACACAGTATTTGGTaGGTCTTGAAAAGCACACCT +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGKHSIW*VLKSTP
Trigger: AGGTGTGCTTTTCAAGACTCACCAAATACTGTGTTT...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGTACTGCCTGCCCAAATaGGTGGTGAAGCTGTCTAGA +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLYCLPK*VVKLSR
Trigger: TCTAGACAGCTTCACCACTCATTTGGGCAGGCAGTA...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCATCAGCCTTTTCACCGTaGTTCAAAGAAAGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSSAFSP*FKESLL
Trigger: AAGCAGGCTTTCTTTGAAGCACGGTGAAAAGGCTGA...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGACACTATGCAACATTCTaGCTCAAAATCTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGHYATF*LKICVL
Trigger: GAGAACACAGATTTTGAGGCAGAATGTTGCATAGTG...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAAGAATCTGTCCATATTaGACGTTCCCCTTGCAACTC +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSRICPY*TFPLQL
Trigger: GAGTTGCAAGGGGAACGTGCAATATGGACAGATTCT...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGAGATTGCCAAGGTCCTaGAGGAATAAGCCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLRLPRS*RNKPSA
Trigger: TGCTGAGGGCTTATTCCTGCAGGACCTTGGCAATCT...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGACACAGAATTTGTGTCTaGCATCTTTGTCCAAATGTC +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGHRICV*HLCPNV
Trigger: GACATTTGGACAAAGATGGCAGACACAAATTCTGTG...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCATTCCATAACTGCCTGTaGCCAGGAGCAAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSFHNCL*PGAKLF
Trigger: AAACAGTTTTGCTCCTGGGCACAGGCAGTTATGGAA...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAATTTGTGAATCCCTTTaGTCACTTCGAATCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSICESL*SLRIRP
Trigger: GGGACGGATTCGAAGTGAGCAAAGGGATTCACAAAT...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCATCTCATGCACAGTGGTaGGTACTTCACTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSSHAQW*VLHCFF
Trigger: AAAGAAGCAGTGAAGTACCCACCACTGTGCATGAGA...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACACTCCCTGATTCCCACTaGAACTTGAGCCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITLPDSH*NLSLLH
Trigger: GTGAAGCAGGCTCAAGTTCCAGTGGGAATCAGGGAG...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTAAAATATTCAGCAATTaGCTCGGTGTACCACAAGGG +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFKIFSN*LGVPQG
Trigger: CCCTTGTGGTACACCGAGCCAATTGCTGAATATTTT...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCATTCCCTCTTCAGGCATaGCTAATGAATCAACATCCT +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSFPLQA*LMNQHP
Trigger: AGGATGTTGATTCATTAGTCATGCCTGAAGAGGGAA...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAACAAAGACCATGCACTaGTTCAGACAATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSTKTMH*FRQFFH
Trigger: GTGGAAGAATTGTCTGAATCAGTGCATGGTCTTTGT...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTGAAGATTATTGTTGCTaGTACAAAGACCATGCACTG +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFEDYCC*YKDHAL
Trigger: CAGTGCATGGTCTTTGTATCAGCAACAATAATCTTC...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTCCAGGATCTTCGACTTaGAAGTTGCCACAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIPGSST*KLPQAP
Trigger: AGGAGCTTGTGGCAACTTTCAAGTCGAAGATCCTGG...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTGTCAAAGGAAGAAAATaGGTATTCAAGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFVKGRK*VFKSRI
Trigger: GATCCTGGACTTGAATACTCATTTTCTTCCTTTGAC...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGACTCTCAAACACAAAATaGGATCGAAGCTATACTACA +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGLSNTK*DRSYTT
Trigger: TGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAG...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGTTCCACGGATGCTCATaGGTAAAAGGAAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLFHGCS*VKGSWS
Trigger: ACTCCAGCTTCCTTTTACTCATGAGCATCCGTGGAA...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTGCAATGAGAGCTAAATaGCCTCCATCTAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFAMRAK*PPSRTN
Trigger: ATTTGTTCTAGATGGAGGTCATTTAGCTCTCATTGC...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTAAATCATGGCATCAATaGCACATTTCTCGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFKSWHQ*HISRAL
Trigger: AAGAGCTCGAGAAATGTGGCATTGATGCCATGATTT...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGCTCTGGGTTTTCTCATaGACAGTGGTGGGTACTTCA +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLLWVFS*TVVGTS
Trigger: TGAAGTACCCACCACTGTGCATGAGAAAACCCAGAG...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAATCAATGAAAGTACCTaGTGCGAGGTATGTTTTATG +
Preference number: 4 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGINEST*CEVCFM
Trigger: CATAAAACATACCTCGCAGCAGGTACTTTCATTGAT...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACATTCACCTGTGGAAGGTaGTGCATCTTCTCACCTGTG +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITFTCGR*CIFSPV
Trigger: CACAGGTGAGAAGATGCAGCACCTTCCACAGGTGAA...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCATATTCTGTTGGTATCTaGAGGGGATTTTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSYSVGI*RGFSLQ
Trigger: CTGGAGTGAAAATCCCCTCCAGATACCAACAGAATA...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
3UTR CAA 72 bp CATATATACTGTACATTCAGAATCCTGGAAAGGGGCTaGCACAGATGTTACCAGTGTATGTCTCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: HIYCTFRILERG*HRCYQCMSQSD
Trigger: GTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCAGGATTCTGAATGTACAGTATATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTGCCTGGATAAGAACTTaGGGAGCTTTCAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIAWIRT*GAFRWQ
Trigger: TTGCCATCTGAAAGCTCCTCAAGTTCTTATCCAGGC...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACACAAGCAGGTGTGAATTaGGCACTGTGCTGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITQAGVN*ALCCLR
Trigger: TCTTAGACAGCACAGTGCTCAATTCACACCTGCTTG...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTGTCTTTAATAACCCCTaGGCTGTAGCCATCTCCATG +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIVFNNP*AVAISM
Trigger: CATGGAGATGGCTACAGCTCAGGGGTTATTAAAGAC...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAGTCAAAGGAAGAAAATaGGTATTCAAGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSVKGRK*VFKSRI
Trigger: GATCCTGGACTTGAATACTCATTTTCTTCCTTTGAC...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTATTAACAGGTCTCACTaGAGAGTAATTTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFINRSH*RVIFHH
Trigger: GTGATGGAAAATTACTCTTCAGTGAGACCTGTTAAT...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGCCAGGCATGCTACGCTaGTTTCACAGATTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLPGMLR*FHRLGF
Trigger: AAAACCTAATCTGTGAAATCAGCGTAGCATGCCTGG...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTTTTCATCTCTGTTGCTaGAAGCCTCTGAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIFHLCC*KPLSFS
Trigger: GCTGAAGCTCAGAGGCTTTCAGCAACAGAGATGAAA...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAAAATCATGGCATCAATaGCACATTTCTCGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSKSWHQ*HISRAL
Trigger: AAGAGCTCGAGAAATGTGGCATTGATGCCATGATTT...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTCTCTGGGTTTTCTCATaGACAGTGGTGGGTACTTCA +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLILWVFS*TVVGTS
Trigger: TGAAGTACCCACCACTGTGCATGAGAAAACCCAGAG...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTAAGGGTTTCCATAACTaGCTGTGCCCAGGAGCAAAA +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIKGFHN*LCPGAK
Trigger: TTTTGCTCCTGGGCACAGGCAGTTATGGAAACCCTT...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAACCGAGTGTAAATCATaGCATCAATGCCACATTTCT +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSTECKS*HQCHIS
Trigger: AGAAATGTGGCATTGATGCCATGATTTACACTCGGT...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGCAACACCACATATCCTaGGGTGAAACACTTCACTGT +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLQHHIS*GETLHC
Trigger: ACAGTGAAGTGTTTCACCCCAGGATATGTGGTGTTG...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGCCCAGGAATGGAAACTaGTACTTCAGTGCTATGGAA +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLPRNGN*YFSAME
Trigger: TTCCATAGCACTGAAGTACCAGTTTCCATTCCTGGG...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACAGCTTTTAATTCTCCCTaGTTCCCACTGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITAFNSP*FPLELE
Trigger: CTCAAGTTCCAGTGGGAATCAGGGAGAATTAAAAGC...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTGCTTTTAATTCTCCCTaGTTCCCACTGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIAFNSP*FPLELE
Trigger: CTCAAGTTCCAGTGGGAATCAGGGAGAATTAAAAGC...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACATTCTTCCACTGCCTCTaGTGTCAGATCACTTGTATC +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITFFHCL*CQITCI
Trigger: GATACAAGTGATCTGACATCAGAGGCAGTGGAAGAA...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAGGCATTTCTACAAAATaGCCATCAATGAAAGTACCT +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSGISTK*PSMKVP
Trigger: AGGTACTTTCATTGATGGTCATTTTGTAGAAATGCC...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTTACCATCTAACACTATaGAACATTCTGCCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFYHLTL*NILPQN
Trigger: ATTTTGAGGCAGAATGTTGCATAGTGTTAGATGGTA...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTCTCACTAGAAGCAAATaGTCTTTTCTCCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLILTRSK*SFLQAL
Trigger: GAGAGCCTGGAGAAAAGAGCATTTGCTTCTAGTGAG...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTTTCTTCCTCGCATTGTaGCATTATTTTACAATTTGC +
Preference number: 4 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFFFLAL*HYFTIC
Trigger: GCAAATTGTAAAATAATGGCACAATGCGAGGAAGAA...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAGTCTGTTTCGGTATGTaGTCTCTAGTTTACTTTTTC +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSVCFGM*SLVYFF
Trigger: GAAAAAGTAAACTAGAGACCACATACCGAAACAGAC...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTAGCCAAAGATTTCTCTaGGTGATGAGGTGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLISQRFL*VMRWPL
Trigger: TAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACAGTACATTCAGAATCCTaGAAAGGGGCTTGCACAGAT +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITVHSES*KGACTD
Trigger: ATCTGTGCAAGCCCCTTTCCAGGATTCTGAATGTAC...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGCTACTACTTCCAGTATaGATGTTCCTTTCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLLLLPV*MFLSAF
Trigger: AAAGGCTGAAAGGAACATTCATACTGGAAGTAGTAG...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTACAAAGACCATGCACTaGTTCAGACAATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLITKTMH*FRQFFH
Trigger: GTGGAAGAATTGTCTGAATCAGTGCATGGTCTTTGT...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGGAAGATTATTGTTGCTaGTACAAAGACCATGCACTG +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLEDYCC*YKDHAL
Trigger: CAGTGCATGGTCTTTGTATCAGCAACAATAATCTTC...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGAAACACAGTATTTGGTaGGTCTTGAAAAGCACACCT +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLKHSIW*VLKSTP
Trigger: AGGTGTGCTTTTCAAGACTCACCAAATACTGTGTTT...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGTTACTCTGGTGTACGTaGAATCAGAACAATACAACC +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLLLWCT*NQNNTT
Trigger: GGTTGTATTGTTCTGATTTCACGTACACCAGAGTAA...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCAGTAAAACAGAATTACTaGATTGCACTTCAAACACTG +
Preference number: 4 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSVKQNY*IALQTL
Trigger: CAGTGTTTGAAGTGCAATGCAGTAATTCTGTTTTAC...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGCAAAGGTTTGAGATCTaGCTGCGGATCTTCAAATAT +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLQRFEI*LRIFKY
Trigger: ATATTTGAAGATCCGCAGGCAGATCTCAAACCTTTG...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTACCACACACAGAACTTaGCCAGAACATTCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLITTHRT*PEHSLK
Trigger: TTTGAGAGAATGTTCTGGGCAAGTTCTGTGTGTGGT...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGGTCCAAAATCAACTGTaGTCAAGGTTGTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLVQNQL*SRLCLK
Trigger: TTTCAGACACAACCTTGAGCACAGTTGATTTTGGAC...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTTCAGTGCTATGGAAATaGAATGCGCTTCATACCACA +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLISVLWK*NALHTT
Trigger: TGTGGTATGAAGCGCATTGCATTTCCATAGCACTGA...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGCAGTTGATATTCTGTTaGTATCTGGAGGGGATTTTC +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLQLIFC*YLEGIF
Trigger: GAAAATCCCCTCCAGATACCAACAGAATATCAACTG...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGGTAGCCATCTCCATGTaGACTTTCATTACATACTTG +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLVAISM*TFITYL
Trigger: CAAGTATGTAATGAAAGTCCACATGGAGATGGCTAC...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGACAAAGAACCCTGCATaGGGTTTTGGTGTAAATGTA +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLTKNPA*GFGVNV
Trigger: TACATTTACACCAAAACCCCATGCAGGGTTCTTTGT...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACAAGCATTTTCTGCAGTTaGTATTCTGTTGGTATCTGG +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITSIFCS*YSVGIW
Trigger: CCAGATACCAACAGAATATCAACTGCAGAAAATGCT...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTATCAGAACAGAGGATTaGTTTCGGTTTAAAACTGGG +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIIRTED*FRFKTG
Trigger: CCCAGTTTTAAACCGAAATCAATCCTCTGTTCTGAT...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGCACCCATTCTTGATTTaGCAACACAATCTAGTCTAT +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLHPFLI*QHNLVY
Trigger: ATAGACTAGATTGTGTTGTCAAATCAAGAATGGGTG...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTGTTTCGAATCTCTCGTaGCTTGTGTCTTACTTTAAC +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIVSNLS*LVSYFN
Trigger: GTTAAAGTAAGACACAAGGCACGAGAGATTCGAAAC...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGGTAGTTATTTACATCTaGCGAAAACAACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLVVIYI*RKQLSI
Trigger: GATGCTGAGTTGTTTTCGGCAGATGTAAATAACTAC...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGAGGAAACTGACAACCTaGTTTGCAACCACAAAAATT +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLRKLTT*FATTKI
Trigger: AATTTTTGTGGTTGCAAAGCAGGTTGTCAGTTTCCT...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACATCTAAGACAAGCACATaGACACCCATTCTTGATTTG +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITSKTST*TPILDL
Trigger: CAAATCAAGAATGGGTGTGCATGTGCTTGTCTTAGA...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTTCTAAGACAAGCACATaGACACCCATTCTTGATTTG +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLISKTST*TPILDL
Trigger: CAAATCAAGAATGGGTGTGCATGTGCTTGTCTTAGA...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTGTCCAAAATCAACTGTaGTCAAGGTTGTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIVQNQL*SRLCLK
Trigger: TTTCAGACACAACCTTGAGCACAGTTGATTTTGGAC...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGGTGCGTTTCAGCGTTTaGCAACTTTTTAAAAATGCT +
Preference number: 4 (lower is better)
Translates to: KYIICESLCSLRIRPIHLVRFSV*QLFKNA
Trigger: AGCATTTTTAAAAAGTTGGCAAACGCTGAAACGCAC...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTCAGTTGATATTCTGTTaGTATCTGGAGGGGATTTTC +
Preference number: 4 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIQLIFC*YLEGIF
Trigger: GAAAATCCCCTCCAGATACCAACAGAATATCAACTG...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACAACAAAGAACCCTGCATaGGGTTTTGGTGTAAATGTA +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITTKNPA*GFGVNV
Trigger: TACATTTACACCAAAACCCCATGCAGGGTTCTTTGT...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR TCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACACTACATTCCAAACACTaGTTTTGCTTTCCTACTGAA +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITLHSKH*FCFPTE
Trigger: TTCAGTAGGAAAGCAAAATCAGTGTTTGGAATGTAG...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR GCA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACAAAAGTTCTACTGTTTTaGTGGCAAGTTTCATCTTGC +
Preference number: 4 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITKVLLF*WQVSSC
Trigger: GCAAGATGAAACTTGCCAGCAAAACAGTAGAACTTT...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS GCA 90 bp AGGGGCAGAGTCCACCGCGCCCTACCTTTATCAGTGTACACTACCTaGCGAGGCTGCCGGGCGGCGCGGCGGCCGGCGGGGGCGCCTCTC +
Preference number: 5 (lower is better)
Translates to: RGRVHRALPLSVYTT*RGCRAARRPAGAPL
Trigger: GAGAGGCGCCCCCGCCGGCCGCCGCGCCGCCCGGCAGCCTCGGCAGGTAGTGTACACTGATAAAGGTAGGGCGCGGTGGACTCTGCCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307659.6
CDS-3UTR CAA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGGTCTCTTACCCCGCTaGCACAGCTGTTTGACAGAA +
Preference number: 5 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATGLLPR*HSCLTE
Trigger: TTCTGTCAAACAGCTGTGCAAGCGGGGTAAGAGACC...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCACATTTCTCGAGCTCTaGTCCCAGCCAGGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSTFLEL*SQPGLH
Trigger: GTGCAGACCTGGCTGGGACAAGAGCTCGAGAAATGT...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACACCACACCCCAAATCCTaGGCTTCTTCAGTTAGCAAG +
Preference number: 5 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATPHPKS*ASSVSK
Trigger: CTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGG...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGACTTTCTCCTTGCATaGTTTCTGAGGCACCAGGAT +
Preference number: 5 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATDFLLA*FLRHQD
Trigger: ATCCTGGTGCCTCAGAAACAATGCAAGGAGAAAGTC...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CCA 90 bp CGCCTCCGCCTTCTGAGCCTGTCTCTTCCGAGGTGGAGCTGGCGCTaGAGCACATCTTTCCGCGGAAGCCATCTGACTTTGCTCCAGAAT +
Preference number: 5 (lower is better)
Translates to: RLRLLSLSLPRWSWR*STSFRGSHLTLLQN
Trigger: ATTCTGGAGCAAAGTCAGATGGCTTCCGCGGAAAGATGTGCTCCAGCGCCAGCTCCACCTCGGAAGAGACAGGCTCAGAAGGCGGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCCTCCGGCAGAACTGGTaGTCTTCATTCTCAACGCAT +
Preference number: 5 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSLRQNW*SSFSTH
Trigger: ATGCGTTGAGAATGAAGACAACCAGTTCTGCCGGAG...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307659.6
CDS-3UTR CAA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTCCAGGATCTTCGACTaGAAAGTTGCCACAAGCTCC +
Preference number: 5 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSSRIFD*KVATSS
Trigger: GGAGCTTGTGGCAACTTTCAAGTCGAAGATCCTGGA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCGGAAGCCATCTGACTTaGCTCCAGAATCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGGSHLT*LQNLSL
Trigger: GAGAGAGAGATTCTGGAGCAAAGTCAGATGGCTTCC...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAAATGTACATGAGATTTaGCTGAATGGAGACCACCGC +
Preference number: 5 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATNVHEI*LNGDHR
Trigger: GCGGTGGTCTCCATTCAGCAAAATCTCATGTACATT...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCATCCTGGAAAGGGGCTaGCACAGATGTTACCAGTGT +
Preference number: 5 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGILERG*HRCYQC
Trigger: ACACTGGTAACATCTGTGCAAGCCCCTTTCCAGGAT...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTCTTCTTCCAAAGGTTaGAGATCTGCCTGCGGATCT +
Preference number: 5 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSSSSKG*RSACGS
Trigger: AGATCCGCAGGCAGATCTCAAACCTTTGGAAGAAGA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCATAGTACATTTCCACTaGATCCTTTGCTGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGIVHFH*ILCWRG
Trigger: TCCCCTCCAGCAAAGGATCAAGTGGAAATGTACTAT...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCCACAGTCATGATTTCTaGCAGGCAAACTGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGHSHDF*QANWFL
Trigger: GAGAAACCAGTTTGCCTGCAAGAAATCATGACTGTG...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCCTGATGTCAGATCACTaGTATCCTGTCTGTTTCGGT +
Preference number: 5 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSLMSDH*YPVCFG
Trigger: ACCGAAACAGACAGGATACAAGTGATCTGACATCAG...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACATCTCTCCTGTACATCTaGCTTCATAAACAGAAGACA +
Preference number: 5 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATSLLYI*LHKQKT
Trigger: TGTCTTCTGTTTATGAAGCAAGATGTACAGGAGAGA...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GCCGGCTCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACATACTTTAATTTCACATaGAGGCCAAATGGAAGTCTC +
Preference number: 5 (lower is better)
Translates to: AGSPGSPRRNGSQSHGATYFNFT*RPNGSL
Trigger: GAGACTTCCATTTGGCCTCAATGTGAAATTAAAGTA...TGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGAGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCGCAGTTGATATTCTGTaGGTATCTGGAGGGGATTTT +
Preference number: 5 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSAVDIL*VSGGDF
Trigger: AAAATCCCCTCCAGATACCAACAGAATATCAACTGC...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTCGAATCTCTCGTGCCTaGTGTCTTACTTTAACATAC +
Preference number: 5 (lower is better)
Translates to: EPEERIAMHRRDSQDAPARISRA*CLTLTY
Trigger: GTATGTTAAAGTAAGACACAAGGCACGAGAGATTCG...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGGGTCTCTTACCCCGCTaGCACAGCTGTTTGACAGAA +
Preference number: 5 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMGLLPR*HSCLTE
Trigger: TTCTGTCAAACAGCTGTGCAAGCGGGGTAAGAGACC...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTTGTGTTTTCTTTATCTaGGGCTACATCCCAGGGTTT +
Preference number: 5 (lower is better)
Translates to: EPEERIAMHRRDSQDAPACVFFI*GYIPGF
Trigger: AAACCCTGGGATGTAGCCCAAGATAAAGAAAACACA...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCTTCTCTCCCTTGGCATTaGTGTAACATTCTTCACACT +
Preference number: 5 (lower is better)
Translates to: EPEERIAMHRRDSQDAPASLPWH*CNILHT
Trigger: AGTGTGAAGAATGTTACACAAATGCCAAGGGAGAGA...AGCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCGAACAGACTTTAGACTaGTTCCACACAGTCATGATT +
Preference number: 5 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSEQTLD*FHTVMI
Trigger: AATCATGACTGTGTGGAACAAGTCTAAAGTCTGTTC...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TCCCCGGGCTCACCAAGGAGAAACGGGAGCCAGTCCCACGGAGCGACAGTCAGCTCATCCAGGTATTTATaGTCCTCTGGTAGAGAACAT +
Preference number: 5 (lower is better)
Translates to: SPGSPRRNGSQSHGATVSSSRYL*SSGREH
Trigger: ATGTTCTCTACCAGAGGACAATAAATACCTGGATGA...GCTGACTGTCGCTCCGTGGGACTGGCTCCCGTTTCTCCTTGGTGAGCCCGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGGTTCGGATGCAGAAATaGGGCGAAAGTGAGTCCGAG +
Preference number: 5 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGVRMQK*GESESE
Trigger: CTCGGACTCACTTTCGCCCAATTTCTGCATCCGAAC...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AGAGCCGGAGGAGCGGATCGCCATGCACAGACGCGACTCACAAGATGCGCCGGCATGACTCCACAGTCTTaGATGGTACTTTCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: RAGGADRHAQTRLTRCAGMTPQS*MVLSFL
Trigger: CAGAAAAGAAAGTACCATCAAAGACTGTGGAGTCAT...GCCGGCGCATCTTGTGAGTCGCGTCTGTGCATGGCGATCCGCTCCTCCGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACGCTTGCACAGCTGTTaGACAGAACCACTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: GAADFSAGHTTFFPSKAARLHSC*TEPLLL
Trigger: TAGCAGCAGTGGTTCTGTCAAACAGCTGTGCAAGCG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGGACTTTCTCCTTGCATaGTTTCTGAGGCACCAGGAT +
Preference number: 5 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMDFLLA*FLRHQD
Trigger: ATCCTGGTGCCTCAGAAACAATGCAAGGAGAAAGTC...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CCA 90 bp CACCCACTAGGTGCCAGGCACTATGCTTTTCTGTTCAGAACCTGTTaGAGAATTTCCTGCACCAGCTCACGGGCTTGTGGGAGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: HPLGARHYAFLFRTC*RISCTSSRACGRSR
Trigger: TCTGCTTCTCCCACAAGCCCGTGAGCTGGTGCAGGAAATTCTCCAACAGGTTCTGAACAGAAAAGCATAGTGCCTGGCACCTAGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503278.1
CDS-3UTR CAA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGTTTCCACTTGATCCTTaGCTGGAGGGGATAATTCTG +
Preference number: 5 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMFPLDP*LEGIIL
Trigger: CAGAATTATCCCCTCCAGCAAAGGATCAAGTGGAAA...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGAATGTACATGAGATTTaGCTGAATGGAGACCACCGC +
Preference number: 5 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMNVHEI*LNGDHR
Trigger: GCGGTGGTCTCCATTCAGCAAAATCTCATGTACATT...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 90 bp CTTCCTCCTCCTGGGGACAGTTCGGATGCAGAAATTGGGCGAAAGTaGGTCCGAGGAGAGATCCGAATAGCCCTGTATTGTGTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: LPPPGDSSDAEIGRK*VRGEIRIALYCVLS
Trigger: TGACAGAACACAATACAGGGCTATTCGGATCTCTCCTCGGACTCACTTTCGCCCAATTTCTGCATCCGAACTGTCCCCAGGAGGAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGTCACTGCTTCTTTCCTaGGTGACTTCACTTTCACTG +
Preference number: 5 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGSLLLS*VTSLSL
Trigger: CAGTGAAAGTGAAGTCACCAAGGAAAGAAGCAGTGA...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACACCACACACAGAACTaGCCCAGAACATTCTCTCAA +
Preference number: 5 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAHHTQN*PRTFSQ
Trigger: TTGAGAGAATGTTCTGGGCAAGTTCTGTGTGTGGTG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 90 bp GGGCCTTCTGACCTTGCTAAACCACCTCTTGCAGGAGACAGAATGTaGACCCAGGCTCCTGGCTCTGAAATATGGGGTTTCGTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: GPSDLAKPPLAGDRM*TQAPGSEIWGFVSF
Trigger: AAAGGAAACGAAACCCCATATTTCAGAGCCAGGAGCCTGGGTTCACATTCTGTCTCCTGCAAGAGGTGGTTTAGCAAGGTCAGAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503278.1
CDS GCA 90 bp GAAACACTGGAGAGGGGTCATCTGCTGAGTTGGCTAGATGCTCCATaGATCCATGGAAGGACAAACCGAGGAACTGTCGCTTACGTACTA +
Preference number: 5 (lower is better)
Translates to: ETLERGHLLSWLDAP*IHGRTNRGTVAYVL
Trigger: TAGTACGTAAGCGACAGTTCCTCGGTTTGTCCTTCCATGGATGCATGGAGCATCTAGCCAACTCAGCAGATGACCCCTCTCCAGTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503278.1
CDS CCA 90 bp CTTTTAATTCTCCCTGATTCCCACTGGAACTTGAGCCTGCTTCACTaGAGCCAGAAGACCACGAGCGAGGGCGAATCTTTCCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: LLILPDSHWNLSLLH*SQKTTSEGESFLQV
Trigger: AACCTGAAGGAAAGATTCGCCCTCGCTCGTGGTCTTCTGGCTCCAGTGAAGCAGGCTCAAGTTCCAGTGGGAATCAGGGAGAATTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CCA 90 bp GGAGAGGGGTCATCTGCTGAGTTGGCTAGATGCTCCATGCATCCATaGAAGGACAAACCGAGGAACTGTCGCTTACGTACTATCTACAGA +
Preference number: 5 (lower is better)
Translates to: GEGSSAELARCSMHP*KDKPRNCRLRTIYR
Trigger: TCTGTAGATAGTACGTAAGCGACAGTTCCTCGGTTTGTCCTTCCATGGATGCATGGAGCATCTAGCCAACTCAGCAGATGACCCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503278.1
CDS-3UTR CAA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCATTTCCACTTGATCCTTaGCTGGAGGGGATAATTCTG +
Preference number: 5 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAFPLDP*LEGIIL
Trigger: CAGAATTATCCCCTCCAGCAAAGGATCAAGTGGAAA...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCACACAGTCATGATTTCTaGCAGGCAAACTGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAHSHDF*QANWFL
Trigger: GAGAAACCAGTTTGCCTGCAAGAAATCATGACTGTG...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCAACTTCACTTTCACTGTaGCAGTCCTTAGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: GAADFSAGHTTFFPSKAATSLSL*QSLGEE
Trigger: TTCCTCTCCTAAGGACTGCAACAGTGAAAGTGAAGT...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TTCGGCTGTGCACATACTGCTCCTCCTGGCCTCTGCCTGTGGCACAATGCCATGCCAGGTCTGTTTTTCTaGACTTCTATTCATTCCTTG +
Preference number: 5 (lower is better)
Translates to: FGCAHTAPPGLCLWHNAMPGLFF*TSIHSL
Trigger: CAAGGAATGAATAGAAGTCAAGAAAAACAGACCTGG...CATGGCATTGTGCCACAGGCAGAGGCCAGGAGGAGCAGTATGTGCACAGCCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGTCTCTCCCTTGGCATTaGTGTAACATTCTTCACACT +
Preference number: 5 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGSLPWH*CNILHT
Trigger: AGTGTGAAGAATGTTACACAAATGCCAAGGGAGAGA...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAATCCTGGAAAGGGGCTaGCACAGATGTTACCAGTGT +
Preference number: 5 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARILERG*HRCYQC
Trigger: ACACTGGTAACATCTGTGCAAGCCCCTTTCCAGGAT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTACATTTCTCGAGCTCTaGTCCCAGCCAGGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFTFLEL*SQPGLH
Trigger: GTGCAGACCTGGCTGGGACAAGAGCTCGAGAAATGT...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGGAACAGACTTTAGACTaGTTCCACACAGTCATGATT +
Preference number: 5 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGEQTLD*FHTVMI
Trigger: AATCATGACTGTGTGGAACAAGTCTAAAGTCTGTTC...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGTCATCCAGGTATTTATaGTCCTCTGGTAGAGAACAT +
Preference number: 5 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGSSRYL*SSGREH
Trigger: ATGTTCTCTACCAGAGGACAATAAATACCTGGATGA...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCATGTGTTTTCTTTATCTaGGGCTACATCCCAGGGTTT +
Preference number: 5 (lower is better)
Translates to: GAADFSAGHTTFFPSKAACVFFI*GYIPGF
Trigger: AAACCCTGGGATGTAGCCCAAGATAAAGAAAACACA...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGACCGAATAGCCCTGTATaGTGTTCTGTCAACACCACA +
Preference number: 5 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARPNSPV*CSVNTT
Trigger: TGTGGTGTTGACAGAACACAATACAGGGCTATTCGG...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGTGTTTTGCAGACTCAGGTAGTAGTCCCTGCGTGTGCTGGGGGTGAGATGGGGCCAGGTCTGTTTTTCTaGACTTCTATTCATTCCTTG +
Preference number: 5 (lower is better)
Translates to: CVLQTQVVVPACAGGEMGPGLFF*TSIHSL
Trigger: CAAGGAATGAATAGAAGTCAAGAAAAACAGACCTGG...CCCCATCTCACCCCCAGCACACGCAGGGACTACTACCTGAGTCTGCAAAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGAACTTCACTTTCACTGTaGCAGTCCTTAGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARTSLSL*QSLGEE
Trigger: TTCCTCTCCTAAGGACTGCAACAGTGAAAGTGAAGT...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTCGCTTGCACAGCTGTTaGACAGAACCACTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFRLHSC*TEPLLL
Trigger: TAGCAGCAGTGGTTCTGTCAAACAGCTGTGCAAGCG...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTGTTCGGATGCAGAAATaGGGCGAAAGTGAGTCCGAG +
Preference number: 5 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFVRMQK*GESESE
Trigger: CTCGGACTCACTTTCGCCCAATTTCTGCATCCGAAC...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GGAGCCGCTGATTTCTCAGCAGGCCACACCACTTTCTTCCCTAGCAAAGCTGCAAAAATGCTATGTGTTTaGCAGACTCAGGTAGTAGTC +
Preference number: 5 (lower is better)
Translates to: GAADFSAGHTTFFPSKAAKMLCV*QTQVVV
Trigger: GACTACTACCTGAGTCTGCAAAACACATAGCATTTT...TGCAGCTTTGCTAGGGAAGAAAGTGGTGTGGCCTGCTGAGAAATCAGCGGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 90 bp CCTGTTCCTGCAGGTCGTAGTCATAGCTGTCATGCAGCAGAAGACTaGGGACATACCGAGTGTAAATCATGGCATCAATGCCACATTTCT +
Preference number: 5 (lower is better)
Translates to: PVPAGRSHSCHAAED*GHTECKSWHQCHIS
Trigger: AGAAATGTGGCATTGATGCCATGATTTACACTCGGTATGTCCTCAGTCTTCTGCTGCATGACAGCTATGACTACGACCTGCAGGAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 90 bp GTCACAACATCAGAAGCTGCACACTGTAACAGACTTCCTTTTGTGTaGCTAGGTGGTACGACTGCCCACTCCCCATCACTATTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: VTTSEAAHCNRLPFV*LGGTTAHSPSLLKV
Trigger: AACCTTCAATAGTGATGGGGAGTGGGCAGTCGTACCACCTAGTCACACAAAAGGAAGTCTGTTACAGTGTGCAGCTTCTGATGTTGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTTCCAGGATCTTCGACTaGAAAGTTGCCACAAGCTCC +
Preference number: 5 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFSRIFD*KVATSS
Trigger: GGAGCTTGTGGCAACTTTCAAGTCGAAGATCCTGGA...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS GCA 90 bp GCACCTACGGAGCTGGTAGAATCTGTCCATATTGCACGTTCCCCTTaGAACTCCATACCATCTAACACTATGCAACATTCTGCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: APTELVESVHIARSP*NSIPSNTMQHSASK
Trigger: TTTTGAGGCAGAATGTTGCATAGTGTTAGATGGTATGGAGTTGCAAGGGGAACGTGCAATATGGACAGATTCTACCAGCTCCGTAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCACCATTCCGCCCTTTTTaGTTTCGAATCTCTCGTGCC +
Preference number: 5 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSPFRPF*FRISRA
Trigger: GGCACGAGAGATTCGAAACAAAAAAGGGCGGAATGG...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTCACCACACACAGAACTaGCCCAGAACATTCTCTCAA +
Preference number: 5 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFHHTQN*PRTFSQ
Trigger: TTGAGAGAATGTTCTGGGCAAGTTCTGTGTGTGGTG...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTCTGATGTCAGATCACTaGTATCCTGTCTGTTTCGGT +
Preference number: 5 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFLMSDH*YPVCFG
Trigger: ACCGAAACAGACAGGATACAAGTGATCTGACATCAG...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTCACTCCCCATCACTATaGAAGGTTTTGAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFHSPSL*KVLSSP
Trigger: TGGAGAACTCAAAACCTTCAATAGTGATGGGGAGTG...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCACCGAATAGCCCTGTATaGTGTTCTGTCAACACCACA +
Preference number: 5 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSPNSPV*CSVNTT
Trigger: TGTGGTGTTGACAGAACACAATACAGGGCTATTCGG...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp GTGTCTCGCATACGACCCCACACCCCAAATCCTTGGCTTCTTCAGTTAGCAAGACAACTGTGCTCAAGGTaGTGTCTGAAATCTATTTAT +
Preference number: 5 (lower is better)
Translates to: VSRIRPHTPNPWLLQLARQLCSR*CLKSIY
Trigger: ATAAATAGATTTCAGACACAACCTTGAGCACAGTTG...TCTTGCTAACTGAAGAAGCCAAGGATTTGGGGTGTGGGGTCGTATGCGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAGTGAATCTTCTCTTCTaGCTTACTCTGAAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGVNLLF*LTLKVF
Trigger: AAAGACCTTCAGAGTAAGCAAGAAGAGAAGATTCAC...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGGGAAGCCATCTGACTTaGCTCCAGAATCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: KYIICESLCSLRIRPIHLGSHLT*LQNLSL
Trigger: GAGAGAGAGATTCTGGAGCAAAGTCAGATGGCTTCC...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGGAAAGGGGCTTGCACAGATGTTACCAGTGTATGTCTCAGAGTGACAGAAGGAATGACTCCACAGTCTTaGATGGTACTTTCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: WKGACTDVTSVCLRVTEGMTPQS*MVLSFL
Trigger: CAGAAAAGAAAGTACCATCAAAGACTGTGGAGTCAT...TCCTTCTGTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 90 bp TTGCTGGTAGTCAGCCACCTAAAACAGACTTTCCCTCTTCAGGCATaGCTAATGAATCAACATCCTGATAGCAACATGCATGTAGATGTG +
Preference number: 5 (lower is better)
Translates to: LLVVSHLKQTFPLQA*LMNQHPDSNMHVDV
Trigger: CACATCTACATGCATGTTGCTATCAGGATGTTGATTCATTAGTCATGCCTGAAGAGGGAAAGTCTGTTTTAGGTGGCTGACTACCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307659.6
ENST00000425103.5
ENST00000508423.1
CDS TCA 90 bp TTGTGTCTTACTTTAACATACTTCATGGATGCTTTTAATTCTCCCTaGTTCCCACTGGAACTTGAGCCTGCTTCACTGGAGCCAGAAGAC +
Preference number: 5 (lower is better)
Translates to: LCLTLTYFMDAFNSP*FPLELEPASLEPED
Trigger: GTCTTCTGGCTCCAGTGAAGCAGGCTCAAGTTCCAGTGGGAATCAGGGAGAATTAAAAGCATCCATGAAGTATGTTAAAGTAAGACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTGTGAATCTTCTCTTCTaGCTTACTCTGAAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFVNLLF*LTLKVF
Trigger: AAAGACCTTCAGAGTAAGCAAGAAGAGAAGATTCAC...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCACGAATCTCTCGTGCCTaGTGTCTTACTTTAACATAC +
Preference number: 5 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSRISRA*CLTLTY
Trigger: GTATGTTAAAGTAAGACACAAGGCACGAGAGATTCG...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACACCATTCCGCCCTTTTTaGTTTCGAATCTCTCGTGCC +
Preference number: 5 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITPFRPF*FRISRA
Trigger: GGCACGAGAGATTCGAAACAAAAAAGGGCGGAATGG...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp CTTCAGTGCTATGGAAATGCAATGCGCTTCATACCACAGTGCGTTTCAGCGTTTGTACATGAATTTAGGTaGCCGACATCCTTAAAATGT +
Preference number: 5 (lower is better)
Translates to: LQCYGNAMRFIPQCVSAFVHEFR*PTSLKC
Trigger: ACATTTTAAGGATGTCGGCAACCTAAATTCATGTAC...AAACGCTGAAACGCACTGTGGTATGAAGCGCATTGCATTTCCATAGCACTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGTCACTGCTTCTTTCCTaGGTGACTTCACTTTCACTG +
Preference number: 5 (lower is better)
Translates to: KYIICESLCSLRIRPIHLSLLLS*VTSLSL
Trigger: CAGTGAAAGTGAAGTCACCAAGGAAAGAAGCAGTGA...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AGCCAAAGATTTCTCTGGGTGATGAGGTGGCCTTTACTGCATGTCAAATGTTCATGTCGGATTTGCTTTTaGTACAAAGCAGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SQRFLWVMRWPLLHVKCSCRICF*YKAGFS
Trigger: AGAAAAGCCTGCTTTGTACAAAAAGCAAATCCGACA...TGAACATTTGACATGCAGTAAAGGCCACCTCATCACCCAGAGAAATCTTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGCAAAATATTCAGCAATaGGCTCGGTGTACCACAAGG +
Preference number: 5 (lower is better)
Translates to: KYIICESLCSLRIRPIHLQNIQQ*ARCTTR
Trigger: CCTTGTGGTACACCGAGCCAATTGCTGAATATTTTG...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGCACTCCCCATCACTATaGAAGGTTTTGAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: KYIICESLCSLRIRPIHLHSPSL*KVLSSP
Trigger: TGGAGAACTCAAAACCTTCAATAGTGATGGGGAGTG...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGACACTTTCATCTCTGTaGCTGAAAGCCTCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: KYIICESLCSLRIRPIHLTLSSL*LKASEL
Trigger: AAGCTCAGAGGCTTTCAGCAACAGAGATGAAAGTGT...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 90 bp CAAGAGTTTATACCAGATCCTTCATTAATATCTGAAAAGAGCTCTTaGTTGCCAGCAAGCAGGTGTGAATTGAGCACTGTGCTGTCTAAG +
Preference number: 5 (lower is better)
Translates to: QEFIPDPSLISEKSS*LPASRCELSTVLSK
Trigger: CTTAGACAGCACAGTGCTCAATTCACACCTGCTTGCTGGCAATCAAGAGCTCTTTTCAGATATTAATGAAGGATCTGGTATAAACTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CCA 90 bp TCCGACTTTCTCCTTGCATTGTTTCTGAGGCACCAGGATCCAACATaGATTGATCAATATCCACTTCATAGAAGTGCGTTAATTCTGATA +
Preference number: 5 (lower is better)
Translates to: SDFLLALFLRHQDPT*IDQYPLHRSALILI
Trigger: TATCAGAATTAACGCACTTCTATGAAGTGGATATTGATCAATCCATGTTGGATCCTGGTGCCTCAGAAACAATGCAAGGAGAAAGTCGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACAATAGTACATTTCCACTaGATCCTTTGCTGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITIVHFH*ILCWRG
Trigger: TCCCCTCCAGCAAAGGATCAAGTGGAAATGTACTAT...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACACAAAATATTCAGCAATaGGCTCGGTGTACCACAAGG +
Preference number: 5 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITQNIQQ*ARCTTR
Trigger: CCTTGTGGTACACCGAGCCAATTGCTGAATATTTTG...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACAACACTTTCATCTCTGTaGCTGAAAGCCTCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITTLSSL*LKASEL
Trigger: AAGCTCAGAGGCTTTCAGCAACAGAGATGAAAGTGT...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 90 bp CTGTCGAATCATATTCAAAATCCGACTTTCTCCTTGCATTGTTTCTaGGGCACCAGGATCCAACATGGATTGATCAATATCCACTTCATA +
Preference number: 5 (lower is better)
Translates to: LSNHIQNPTFSLHCF*GTRIQHGLINIHFI
Trigger: TATGAAGTGGATATTGATCAATCCATGTTGGATCCTGGTGCCTCAGAAACAATGCAAGGAGAAAGTCGGATTTTGAATATGATTCGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGAGGTTTATGTCGGATTaGCTTTTTGTACAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: KYIICESLCSLRIRPIHLRFMSD*LFVQSR
Trigger: CCTGCTTTGTACAAAAAGCAAATCCGACATAAACCT...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 90 bp TCTAAATCTATTTCCAGGGATTCATTCATGCTACATTCCAAACACTaGTTTTGCTTTCCTACTGAAAGAATCCCAGTTGATTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SKSISRDSFMLHSKH*FCFPTERIPVDSSW
Trigger: CCAGGAGGAATCAACTGGGATTCTTTCAGTAGGAAAGCAAAATCAGTGTTTGGAATGTAGCATGAATGAATCCCTGGAAATAGATTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGAAGCATTTTCTGCAGTaGATATTCTGTTGGTATCTG +
Preference number: 5 (lower is better)
Translates to: KYIICESLCSLRIRPIHLKHFLQ*IFCWYL
Trigger: CAGATACCAACAGAATATCAACTGCAGAAAATGCTT...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGGTACATGAATTTAGGTaGCCGACATCCTTAAAATGT +
Preference number: 5 (lower is better)
Translates to: KYIICESLCSLRIRPIHLVHEFR*PTSLKC
Trigger: ACATTTTAAGGATGTCGGCAACCTAAATTCATGTAC...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTTGTCGGATTTGCTTTTaGTACAAAGCAGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: MQKAVILLRQAHAHPFLICRICF*YKAGFS
Trigger: AGAAAAGCCTGCTTTGTACAAAAAGCAAATCCGACA...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACAAGGTTTATGTCGGATTaGCTTTTTGTACAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITRFMSD*LFVQSR
Trigger: CCTGCTTTGTACAAAAAGCAAATCCGACATAAACCT...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp AAATACATAATTTGTGAATCCCTTTGCTCACTTCGAATCCGTCCCATTCACCTGAGGATCCAACATGGATaGATCAATATCCACTTCATA +
Preference number: 5 (lower is better)
Translates to: KYIICESLCSLRIRPIHLRIQHG*INIHFI
Trigger: TATGAAGTGGATATTGATCAATCCATGTTGGATCCT...CAGGTGAATGGGACGGATTCGAAGTGAGCAAAGGGATTCACAAATTATGTATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTTCTCTCCTGTACATCTaGCTTCATAAACAGAAGACA +
Preference number: 5 (lower is better)
Translates to: MQKAVILLRQAHAHPFLISLLYI*LHKQKT
Trigger: TGTCTTCTGTTTATGAAGCAAGATGTACAGGAGAGA...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 90 bp AAGTCAAAGGAAGAAAATGAGTATTCAAGTCCAGGATCTTCGACTTaGAAGTTGCCACAAGCTCCTAGTAAGTCTTCATGGAAGATAAAA +
Preference number: 5 (lower is better)
Translates to: KSKEENEYSSPGSST*KLPQAPSKSSWKIK
Trigger: TTTTATCTTCCATGAAGACTTACTAGGAGCTTGTGGCAACTTTCAAGTCGAAGATCCTGGACTTGAATACTCATTTTCTTCCTTTGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 90 bp GGGCTGAAAGATGCAATCCCTTCAGGTTCAAATGAGCATTCTACATaGAGAACTTGTGAAAATGGATTGCTTAAGTCAAAGGAAGAAAAT +
Preference number: 5 (lower is better)
Translates to: GLKDAIPSGSNEHST*RTCENGLLKSKEEN
Trigger: ATTTTCTTCCTTTGACTTAAGCAATCCATTTTCACAAGTTCTTCATGTAGAATGCTCATTTGAACCTGAAGGGATTGCATCTTTCAGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS GCA 90 bp AACTGCAGGCATTTCTACAAAATGACCATCAATGAAAGTACCTGCTaGGAGGTATGTTTTATGAAGATTATTGTTGCTGATACAAAGACC +
Preference number: 5 (lower is better)
Translates to: NCRHFYKMTINESTC*EVCFMKIIVADTKT
Trigger: GGTCTTTGTATCAGCAACAATAATCTTCATAAAACATACCTCGCAGCAGGTACTTTCATTGATGGTCATTTTGTAGAAATGCCTGCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp TGCCCAGAACATTCTCTCAAACACAAAATGAGATCGAAGCTATACTACATCACATACTTTAATTTCACATaGAGGCCAAATGGAAGTCTC +
Preference number: 5 (lower is better)
Translates to: CPEHSLKHKMRSKLYYITYFNFT*RPNGSL
Trigger: GAGACTTCCATTTGGCCTCAATGTGAAATTAAAGTA...TGTGATGTAGTATAGCTTCGATCTCATTTTGTGTTTGAGAGAATGTTCTGGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS-3UTR CAA 90 bp ATGCAAAAAGCAGTGATACTTCTAAGACAAGCACATGCACACCCATTCTTGATTAGGATCCAACATGGATaGATCAATATCCACTTCATA +
Preference number: 5 (lower is better)
Translates to: MQKAVILLRQAHAHPFLIRIQHG*INIHFI
Trigger: TATGAAGTGGATATTGATCAATCCATGTTGGATCCT...AATCAAGAATGGGTGTGCATGTGCTTGTCTTAGAAGTATCACTGCTTTTTGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS GCA 90 bp TATAACTGCAGGCATTTCTACAAAATGACCATCAATGAAAGTACCTaGTGCGAGGTATGTTTTATGAAGATTATTGTTGCTGATACAAAG +
Preference number: 5 (lower is better)
Translates to: YNCRHFYKMTINEST*CEVCFMKIIVADTK
Trigger: CTTTGTATCAGCAACAATAATCTTCATAAAACATACCTCGCAGCAGGTACTTTCATTGATGGTCATTTTGTAGAAATGCCTGCAGTTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CCA 72 bp CTTCTGAGCCTGTCTCTTCCGAGGTGGAGCTGGCGCTaGAGCACATCTTTCCGCGGAAGCCATCTGACTTTG +
Preference number: 6 (lower is better)
Translates to: LLSLSLPRWSWR*STSFRGSHLTL
Trigger: CAAAGTCAGATGGCTTCCGCGGAAAGATGTGCTCCAGCGCCAGCTCCACCTCGGAAGAGACAGGCTCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CCA 72 bp CTCCCTGATTCCCACTGGAACTTGAGCCTGCTTCACTaGAGCCAGAAGACCACGAGCGAGGGCGAATCTTTC +
Preference number: 6 (lower is better)
Translates to: LPDSHWNLSLLH*SQKTTSEGESF
Trigger: GAAAGATTCGCCCTCGCTCGTGGTCTTCTGGCTCCAGTGAAGCAGGCTCAAGTTCCAGTGGGAATCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CCA 72 bp GCTTCCTCCTCCTGGGGACAGTTCGGATGCAGAAATTaGGCGAAAGTGAGTCCGAGGAGAGATCCGAATAGC +
Preference number: 6 (lower is better)
Translates to: ASSSWGQFGCRN*AKVSPRRDPNS
Trigger: GCTATTCGGATCTCTCCTCGGACTCACTTTCGCCCAATTTCTGCATCCGAACTGTCCCCAGGAGGAGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 72 bp TGGTACTCTGACCTCCGCACAGCCTTATCAGGCTCCTaGAGGGTCTCCAGTTCAGCTTCAGCATCTAGACAG +
Preference number: 6 (lower is better)
Translates to: WYSDLRTALSGS*RVSSSASASRQ
Trigger: CTGTCTAGATGCTGAAGCTGAACTGGAGACCCTTCAGGAGCCTGATAAGGCTGTGCGGAGGTCAGAGTACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CCA 72 bp AAGCTGAGGCTGAAAGAAAGTGATTTCACCCAAGCCTaGCTGCTACCGAGTGGACAGGGCCTTCTGACCTTG +
Preference number: 6 (lower is better)
Translates to: KLRLKESDFTQA*LLPSGQGLLTL
Trigger: CAAGGTCAGAAGGCCCTGTCCACTCGGTAGCAGCCAGGCTTGGGTGAAATCACTTTCTTTCAGCCTCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503278.1
CDS CAA 90 bp CTGCTACCGAGTGGACAGGGCCTTCTGACCTTGCTAAACCACCTCTaGCAGGAGACAGAATGTGAACCCAGGCTCCTGGCTCTGAAATAT +
Preference number: 6 (lower is better)
Translates to: LLPSGQGLLTLLNHL*QETECEPRLLALKY
Trigger: ATATTTCAGAGCCAGGAGCCTGGGTTCACATTCTGTCTCCTGCAAGAGGTGGTTTAGCAAGGTCAGAAGGCCCTGTCCACTCGGTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503278.1
CDS TCA 72 bp CCTGGGGACAGTTCGGATGCAGAAATTGGGCGAAAGTaGGTCCGAGGAGAGATCCGAATAGCCCTGTATTGT +
Preference number: 6 (lower is better)
Translates to: PGDSSDAEIGRK*VRGEIRIALYC
Trigger: ACAATACAGGGCTATTCGGATCTCTCCTCGGACTCACTTTCGCCCAATTTCTGCATCCGAACTGTCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS GCA 72 bp AACACTGGAGAGGGGTCATCTGCTGAGTTGGCTAGATaGTCCATGCATCCATGGAAGGACAAACCGAGGAAC +
Preference number: 6 (lower is better)
Translates to: NTGEGSSAELAR*SMHPWKDKPRN
Trigger: GTTCCTCGGTTTGTCCTTCCATGGATGCATGGAGCATCTAGCCAACTCAGCAGATGACCCCTCTCCAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503278.1
CDS TCA 72 bp GACCTTGCTAAACCACCTCTTGCAGGAGACAGAATGTaGACCCAGGCTCCTGGCTCTGAAATATGGGGTTTC +
Preference number: 6 (lower is better)
Translates to: DLAKPPLAGDRM*TQAPGSEIWGF
Trigger: GAAACCCCATATTTCAGAGCCAGGAGCCTGGGTTCACATTCTGTCTCCTGCAAGAGGTGGTTTAGCAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503278.1
CDS CCA 72 bp GATGCTGAAACACTGGAGAGGGGTCATCTGCTGAGTTaGCTAGATGCTCCATGCATCCATGGAAGGACAAAC +
Preference number: 6 (lower is better)
Translates to: DAETLERGHLLS*LDAPCIHGRTN
Trigger: GTTTGTCCTTCCATGGATGCATGGAGCATCTAGCCAACTCAGCAGATGACCCCTCTCCAGTGTTTCAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503278.1
CDS CAA 72 bp CGCTGGAGCACATCTTTCCGCGGAAGCCATCTGACTTaGCTCCAGAATCTCTCTCTCCTGTACATCTTGCTT +
Preference number: 6 (lower is better)
Translates to: RWSTSFRGSHLT*LQNLSLLYILL
Trigger: AAGCAAGATGTACAGGAGAGAGAGATTCTGGAGCAAAGTCAGATGGCTTCCGCGGAAAGATGTGCTCCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 72 bp TCAGAAGCTGCACACTGTAACAGACTTCCTTTTGTGTaGCTAGGTGGTACGACTGCCCACTCCCCATCACTA +
Preference number: 6 (lower is better)
Translates to: SEAAHCNRLPFV*LGGTTAHSPSL
Trigger: TAGTGATGGGGAGTGGGCAGTCGTACCACCTAGTCACACAAAAGGAAGTCTGTTACAGTGTGCAGCTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS GCA 72 bp TATGCTTTTCTGTTCAGAACCTGTTGGAGAATTTCCTaGACCAGCTCACGGGCTTGTGGGAGAAGCAGATGC +
Preference number: 6 (lower is better)
Translates to: YAFLFRTCWRIS*TSSRACGRSRC
Trigger: GCATCTGCTTCTCCCACAAGCCCGTGAGCTGGTGCAGGAAATTCTCCAACAGGTTCTGAACAGAAAAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503278.1
CDS CCA 72 bp TCATCTGCTGAGTTGGCTAGATGCTCCATGCATCCATaGAAGGACAAACCGAGGAACTGTCGCTTACGTACT +
Preference number: 6 (lower is better)
Translates to: SSAELARCSMHP*KDKPRNCRLRT
Trigger: AGTACGTAAGCGACAGTTCCTCGGTTTGTCCTTCCATGGATGCATGGAGCATCTAGCCAACTCAGCAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503278.1
CDS CCA 72 bp ACTTCATGGATGCTTTTAATTCTCCCTGATTCCCACTaGAACTTGAGCCTGCTTCACTGGAGCCAGAAGACC +
Preference number: 6 (lower is better)
Translates to: TSWMLLILPDSH*NLSLLHWSQKT
Trigger: GGTCTTCTGGCTCCAGTGAAGCAGGCTCAAGTTCCAGTGGGAATCAGGGAGAATTAAAAGCATCCATGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 90 bp AATTGGGCGAAAGTGAGTCCGAGGAGAGATCCGAATAGCCCTGTATaGTGTTCTGTCAACACCACATATCCTGGGGTGAAACACTTCACT +
Preference number: 6 (lower is better)
Translates to: NWAKVSPRRDPNSPV*CSVNTTYPGVKHFT
Trigger: AGTGAAGTGTTTCACCCCAGGATATGTGGTGTTGACAGAACACAATACAGGGCTATTCGGATCTCTCCTCGGACTCACTTTCGCCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS GCA 72 bp TGTTCAAATGACACGAAGGGTTTCCATAACTGCCTGTaGCCAGGAGCAAAACTGTTTCCTGGGGTCATAAAG +
Preference number: 6 (lower is better)
Translates to: CSNDTKGFHNCL*PGAKLFPGVIK
Trigger: CTTTATGACCCCAGGAAACAGTTTTGCTCCTGGGCACAGGCAGTTATGGAAACCCTTCGTGTCATTTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS GCA 72 bp TGGGGTCATTTGTTCATTTATGCAGCACCCACTAGGTaGCAGGCACTATGCTTTTCTGTTCAGAACCTGTTG +
Preference number: 6 (lower is better)
Translates to: WGHLFIYAAPTR*QALCFSVQNLL
Trigger: CAACAGGTTCTGAACAGAAAAGCATAGTGCCTGGCACCTAGTGGGTGCTGCATAAATGAACAAATGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503278.1
CDS TCA 72 bp CATTTCAGAAACAGACACAGGGCCTGGATAAGAACTTaGGGAGCTTTCAGATGGCAAACCATCCACAACAAC +
Preference number: 6 (lower is better)
Translates to: HFRNRHRAWIRT*GAFRWQTIHNN
Trigger: GTTGTTGTGGATGGTTTGCCATCTGAAAGCTCCTCAAGTTCTTATCCAGGCCCTGTGTCTGTTTCTGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307659.6
ENST00000425103.5
ENST00000508423.1
CDS CCA 72 bp CAATACAGGGAACTCTTCCAGCTGTCCCGAAGAAACTaGATTATCTTCATAAGCAGGAAACTGACAACCTGC +
Preference number: 6 (lower is better)
Translates to: QYRELFQLSRRN*IIFISRKLTTC
Trigger: GCAGGTTGTCAGTTTCCTGCTTATGAAGATAATCCAGTTTCTTCGGGACAGCTGGAAGAGTTCCCTGTATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 72 bp TTTCTCCCTATTTCTTTTAAAGGTCTCTTACCCCGCTaGCACAGCTGTTTGACAGAACCACTGCTGCTACTG +
Preference number: 6 (lower is better)
Translates to: FLPISFKGLLPR*HSCLTEPLLLL
Trigger: CAGTAGCAGCAGTGGTTCTGTCAAACAGCTGTGCAAGCGGGGTAAGAGACCTTTAAAAGAAATAGGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 90 bp TCACCGTGCTTCAAAGAAAGCCTGCTTTGCCCATTCCGCCCTTTTTaGTTTCGAATCTCTCGTGCCTTGTGTCTTACTTTAACATACTTC +
Preference number: 6 (lower is better)
Translates to: SPCFKESLLCPFRPF*FRISRALCLTLTYF
Trigger: GAAGTATGTTAAAGTAAGACACAAGGCACGAGAGATTCGAAACAAAAAAGGGCGGAATGGGCAAAGCAGGCTTTCTTTGAAGCACGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS GCA 72 bp GAGCTGGTAGAATCTGTCCATATTGCACGTTCCCCTTaGAACTCCATACCATCTAACACTATGCAACATTCT +
Preference number: 6 (lower is better)
Translates to: ELVESVHIARSP*NSIPSNTMQHS
Trigger: AGAATGTTGCATAGTGTTAGATGGTATGGAGTTGCAAGGGGAACGTGCAATATGGACAGATTCTACCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 72 bp CAGACAATTCTTCCACTGCCTCTGATGTCAGATCACTaGTATCCTGTCTGTTTCGGTATGTGGTCTCTAGTT +
Preference number: 6 (lower is better)
Translates to: QTILPLPLMSDH*YPVCFGMWSLV
Trigger: AACTAGAGACCACATACCGAAACAGACAGGATACAAGTGATCTGACATCAGAGGCAGTGGAAGAATTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 72 bp AACACTGATTTTGCTTTCCTACTGAAAGAATCCCAGTaGATTCCTCCTGGGAATCCAGTGATGTCTGAGCAC +
Preference number: 6 (lower is better)
Translates to: NTDFAFLLKESQ*IPPGNPVMSEH
Trigger: GTGCTCAGACATCACTGGATTCCCAGGAGGAATCAACTGGGATTCTTTCAGTAGGAAAGCAAAATCAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 90 bp AGACCACGAGCGAGGGCGAATCTTTCCTTCAGGTTTATGTCGGATTaGCTTTTTGTACAAAGCAGGCTTTTCTTCAATTGTGCCATTACT +
Preference number: 6 (lower is better)
Translates to: RPRARANLSFRFMSD*LFVQSRLFFNCAIT
Trigger: AGTAATGGCACAATTGAAGAAAAGCCTGCTTTGTACAAAAAGCAAATCCGACATAAACCTGAAGGAAAGATTCGCCCTCGCTCGTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 90 bp GGCTTTTTCCCACCAGGTCTGTTTTTCTTGACTTCTATTCATTCCTaGTATATCAGTGTTCAATACAGGGAACTCTTCCAGCTGTCCCGA +
Preference number: 6 (lower is better)
Translates to: GFFPPGLFFLTSIHS*YISVQYRELFQLSR
Trigger: TCGGGACAGCTGGAAGAGTTCCCTGTATTGAACACTGATATACAAGGAATGAATAGAAGTCAAGAAAAACAGACCTGGTGGGAAAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 72 bp GTCAGCCACCTAAAACAGACTTTCCCTCTTCAGGCATaGCTAATGAATCAACATCCTGATAGCAACATGCAT +
Preference number: 6 (lower is better)
Translates to: VSHLKQTFPLQA*LMNQHPDSNMH
Trigger: ATGCATGTTGCTATCAGGATGTTGATTCATTAGTCATGCCTGAAGAGGGAAAGTCTGTTTTAGGTGGCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307659.6
ENST00000425103.5
ENST00000508423.1
CDS TCA 72 bp ACTTTAACATACTTCATGGATGCTTTTAATTCTCCCTaGTTCCCACTGGAACTTGAGCCTGCTTCACTGGAG +
Preference number: 6 (lower is better)
Translates to: TLTYFMDAFNSP*FPLELEPASLE
Trigger: CTCCAGTGAAGCAGGCTCAAGTTCCAGTGGGAATCAGGGAGAATTAAAAGCATCCATGAAGTATGTTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 72 bp AAAGTCTCGATACCAGAGCTCATAATGCTCAAGGTGTaGCAAGGACGGCAATTATATTCCATTTCCTTCGGA +
Preference number: 6 (lower is better)
Translates to: KVSIPELIMLKV*QGRQLYSISFG
Trigger: TCCGAAGGAAATGGAATATAATTGCCGTCCTTGTCACACCTTGAGCATTATGAGCTCTGGTATCGAGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503069.1
CDS CCA 72 bp ACTTTTTCTGCTCAGAGGAACAAAATATTCAGCAATTaGCTCGGTGTACCACAAGGGCTCCTCTTTATACTC +
Preference number: 6 (lower is better)
Translates to: TFSAQRNKIFSN*LGVPQGLLFIL
Trigger: GAGTATAAAGAGGAGCCCTTGTGGTACACCGAGCCAATTGCTGAATATTTTGTTCCTCTGAGCAGAAAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CCA 72 bp CTCCTTGCATTGTTTCTGAGGCACCAGGATCCAACATaGATTGATCAATATCCACTTCATAGAAGTGCGTTA +
Preference number: 6 (lower is better)
Translates to: LLALFLRHQDPT*IDQYPLHRSAL
Trigger: TAACGCACTTCTATGAAGTGGATATTGATCAATCCATGTTGGATCCTGGTGCCTCAGAAACAATGCAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 72 bp TTCAAAGAAAGCCTGCTTTGCCCATTCCGCCCTTTTTaGTTTCGAATCTCTCGTGCCTTGTGTCTTACTTTA +
Preference number: 6 (lower is better)
Translates to: FKESLLCPFRPF*FRISRALCLTL
Trigger: TAAAGTAAGACACAAGGCACGAGAGATTCGAAACAAAAAAGGGCGGAATGGGCAAAGCAGGCTTTCTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 90 bp TCTCTAGTTTACTTTTTCTGCTCAGAGGAACAAAATATTCAGCAATaGGCTCGGTGTACCACAAGGGCTCCTCTTTATACTCTGTGTCCT +
Preference number: 6 (lower is better)
Translates to: SLVYFFCSEEQNIQQ*ARCTTRAPLYTLCP
Trigger: AGGACACAGAGTATAAAGAGGAGCCCTTGTGGTACACCGAGCCAATTGCTGAATATTTTGTTCCTCTGAGCAGAAAAAGTAAACTAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 90 bp GCACTGATTCAGACAATTCTTCCACTGCCTCTGATGTCAGATCACTaGTATCCTGTCTGTTTCGGTATGTGGTCTCTAGTTTACTTTTTC +
Preference number: 6 (lower is better)
Translates to: ALIQTILPLPLMSDH*YPVCFGMWSLVYFF
Trigger: GAAAAAGTAAACTAGAGACCACATACCGAAACAGACAGGATACAAGTGATCTGACATCAGAGGCAGTGGAAGAATTGTCTGAATCAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 90 bp GAGTTCTCCATAAACTCCTCCAAGAATGAATGTGTTTTCTTTATCTaGGGCTACATCCCAGGGTTTAGAGGGTGTTGTATAATCACCACC +
Preference number: 6 (lower is better)
Translates to: EFSINSSKNECVFFI*GYIPGFRGCCIITT
Trigger: GGTGGTGATTATACAACACCCTCTAAACCCTGGGATGTAGCCCAAGATAAAGAAAACACATTCATTCTTGGAGGAGTTTATGGAGAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 72 bp ATACCAGATCCTTCATTAATATCTGAAAAGAGCTCTTaGTTGCCAGCAAGCAGGTGTGAATTGAGCACTGTG +
Preference number: 6 (lower is better)
Translates to: IPDPSLISEKSS*LPASRCELSTV
Trigger: CACAGTGCTCAATTCACACCTGCTTGCTGGCAATCAAGAGCTCTTTTCAGATATTAATGAAGGATCTGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 72 bp GAAGAAAATGAGTATTCAAGTCCAGGATCTTCGACTTaGAAGTTGCCACAAGCTCCTAGTAAGTCTTCATGG +
Preference number: 6 (lower is better)
Translates to: EENEYSSPGSST*KLPQAPSKSSW
Trigger: CCATGAAGACTTACTAGGAGCTTGTGGCAACTTTCAAGTCGAAGATCCTGGACTTGAATACTCATTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS GCA 72 bp TTCTGTCGAATCATATTCAAAATCCGACTTTCTCCTTaGATTGTTTCTGAGGCACCAGGATCCAACATGGAT +
Preference number: 6 (lower is better)
Translates to: FCRIIFKIRLSP*IVSEAPGSNMD
Trigger: ATCCATGTTGGATCCTGGTGCCTCAGAAACAATGCAAGGAGAAAGTCGGATTTTGAATATGATTCGACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 72 bp ACAGACTTTAGACTTGTTCCACACAGTCATGATTTCTaGCAGGCAAACTGGTTTCTCAGAAAGTGGTGGAAA +
Preference number: 6 (lower is better)
Translates to: TDFRLVPHSHDF*QANWFLRKWWK
Trigger: TTTCCACCACTTTCTGAGAAACCAGTTTGCCTGCAAGAAATCATGACTGTGTGGAACAAGTCTAAAGTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 72 bp GCGAGGGCGAATCTTTCCTTCAGGTTTATGTCGGATTaGCTTTTTGTACAAAGCAGGCTTTTCTTCAATTGT +
Preference number: 6 (lower is better)
Translates to: ARANLSFRFMSD*LFVQSRLFFNC
Trigger: ACAATTGAAGAAAAGCCTGCTTTGTACAAAAAGCAAATCCGACATAAACCTGAAGGAAAGATTCGCCCTCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 72 bp TACTTTTTCTGCTCAGAGGAACAAAATATTCAGCAATaGGCTCGGTGTACCACAAGGGCTCCTCTTTATACT +
Preference number: 6 (lower is better)
Translates to: YFFCSEEQNIQQ*ARCTTRAPLYT
Trigger: AGTATAAAGAGGAGCCCTTGTGGTACACCGAGCCAATTGCTGAATATTTTGTTCCTCTGAGCAGAAAAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 90 bp AGAGTAAGAACAGACTTTAGACTTGTTCCACACAGTCATGATTTCTaGCAGGCAAACTGGTTTCTCAGAAAGTGGTGGAAATGCTTCATA +
Preference number: 6 (lower is better)
Translates to: RVRTDFRLVPHSHDF*QANWFLRKWWKCFI
Trigger: TATGAAGCATTTCCACCACTTTCTGAGAAACCAGTTTGCCTGCAAGAAATCATGACTGTGTGGAACAAGTCTAAAGTCTGTTCTTACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 90 bp GAGCGAGGGCGAATCTTTCCTTCAGGTTTATGTCGGATTTGCTTTTaGTACAAAGCAGGCTTTTCTTCAATTGTGCCATTACTAAATTTG +
Preference number: 6 (lower is better)
Translates to: ERGRIFPSGLCRICF*YKAGFSSIVPLLNL
Trigger: CAAATTTAGTAATGGCACAATTGAAGAAAAGCCTGCTTTGTACAAAAAGCAAATCCGACATAAACCTGAAGGAAAGATTCGCCCTCGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS TCA 72 bp CATATTCAAAATCCGACTTTCTCCTTGCATTGTTTCTaGGGCACCAGGATCCAACATGGATTGATCAATATC +
Preference number: 6 (lower is better)
Translates to: HIQNPTFSLHCF*GTRIQHGLINI
Trigger: GATATTGATCAATCCATGTTGGATCCTGGTGCCTCAGAAACAATGCAAGGAGAAAGTCGGATTTTGAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 72 bp CTGGATATTCTTCTAAACCACTCTCTCCCTTGGCATTaGTGTAACATTCTTCACACTCTGATGCAGGAAAAA +
Preference number: 6 (lower is better)
Translates to: LDILLNHSLPWH*CNILHTLMQEK
Trigger: TTTTTCCTGCATCAGAGTGTGAAGAATGTTACACAAATGCCAAGGGAGAGAGTGGTTTAGAAGAATATCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS CAA 72 bp CACAACAACTGTACAGATAGGGTACATGAATTTAGGTaGCCGACATCCTTAAAATGTGAAGCATTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: HNNCTDRVHEFR*PTSLKCEAFSA
Trigger: TGCAGAAAATGCTTCACATTTTAAGGATGTCGGCAACCTAAATTCATGTACCCTATCTGTACAGTTGTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307659.6
ENST00000425103.5
ENST00000508423.1
CDS CAA 90 bp CAAACCATCCACAACAACTGTACAGATAGGGTACATGAATTTAGGTaGCCGACATCCTTAAAATGTGAAGCATTTTCTGCAGTTGATATT +
Preference number: 6 (lower is better)
Translates to: QTIHNNCTDRVHEFR*PTSLKCEAFSAVDI
Trigger: AATATCAACTGCAGAAAATGCTTCACATTTTAAGGATGTCGGCAACCTAAATTCATGTACCCTATCTGTACAGTTGTTGTGGATGGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307659.6
ENST00000425103.5
ENST00000508423.1
CDS CAA 72 bp CGAATCTTTCCTTCAGGTTTATGTCGGATTTGCTTTTaGTACAAAGCAGGCTTTTCTTCAATTGTGCCATTA +
Preference number: 6 (lower is better)
Translates to: RIFPSGLCRICF*YKAGFSSIVPL
Trigger: TAATGGCACAATTGAAGAAAAGCCTGCTTTGTACAAAAAGCAAATCCGACATAAACCTGAAGGAAAGATTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS GCA 72 bp AGGCATTTCTACAAAATGACCATCAATGAAAGTACCTaGTGCGAGGTATGTTTTATGAAGATTATTGTTGCT +
Preference number: 6 (lower is better)
Translates to: RHFYKMTINEST*CEVCFMKIIVA
Trigger: AGCAACAATAATCTTCATAAAACATACCTCGCAGCAGGTACTTTCATTGATGGTCATTTTGTAGAAATGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5
CDS GCA 72 bp CATTTCTACAAAATGACCATCAATGAAAGTACCTGCTaGGAGGTATGTTTTATGAAGATTATTGTTGCTGAT +
Preference number: 6 (lower is better)
Translates to: HFYKMTINESTC*EVCFMKIIVAD
Trigger: ATCAGCAACAATAATCTTCATAAAACATACCTCGCAGCAGGTACTTTCATTGATGGTCATTTTGTAGAAATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307659.6
ENST00000425103.5