RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KDM5C (Homo sapiens)

Ensembl gene IDs: ENSG00000126012

Ensembl transcript IDs: ENST00000349663.6, ENST00000375379.7, ENST00000375383.7, ENST00000375401.8, ENST00000404049.7, ENST00000428012.1, ENST00000429877.5, ENST00000452825.7, ENST00000465402.1, ENST00000477109.1, ENST00000481369.1, ENST00000495519.1, ENST00000497100.5, ENST00000497995.1

Found 477 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCCAGGAGGAGGAAAGGAGACAGGGGAGGACAGGGAGGGAGGACTaGGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCAC +
Preference number: 1 (lower is better)
Translates to: TQEEERRQGRTGRED*GGCEDKHQKLSSDH
Trigger: GTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCCCTGTCCTCCCCTGTCTCCTTTCCTCCTCCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
3UTR CCA 90 bp ATAAACTGGAGGGCATCAACTGGGGGAGGTTGTAGTGTAGGAGTTTaGGTGAGGGGGCCCGAGCCCATCTGTTTGGACTTGAGGGAAAGT +
Preference number: 1 (lower is better)
Translates to: INWRASTGGGCSVGV*VRGPEPICLDLRES
Trigger: ACTTTCCCTCAAGTCCAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTACACTACAACCTCCCCCAGTTGATGCCCTCCAGTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452825.7
3UTR-3UTR TCA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCCCCAAGAAGCAGGCTTaGTGGTCAGAAAGAGGATCC +
Preference number: 2 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPPKKQA*WSERGS
Trigger: GGATCCTCTTTCTGACCATCAAGCCTGCTTCTTGGG...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
3UTR-3UTR CCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCACAAGGGACTCAGGGGTaGGCGGGTAGCAGGGATGGC +
Preference number: 2 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPQGTQG*AGSRDG
Trigger: GCCATCCCTGCTACCCGCCCACCCCTGAGTCCCTTG...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
3UTR-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAGGGGTTAGTGTAGCATaGCCTGGCCAGGACCAGAAC +
Preference number: 2 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGGVSVA*PGQDQN
Trigger: GTTCTGGTCCTGGCCAGGCCATGCTACACTAACCCC...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
3UTR-3UTR GCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAGCCCATCCATCTATCTaGCTCAGGTGTCTGGGAATG +
Preference number: 2 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGAHPSI*LRCLGM
Trigger: CATTCCCAGACACCTGAGGCAGATAGATGGATGGGC...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
3UTR-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCCAAGGGACTCAGGGGTaGGCGGGTAGCAGGGATGGC +
Preference number: 2 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIQGTQG*AGSRDG
Trigger: GCCATCCCTGCTACCCGCCCACCCCTGAGTCCCTTG...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
3UTR-3UTR TCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGACCCAAGAAGCAGGCTTaGTGGTCAGAAAGAGGATCC +
Preference number: 2 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGPKKQA*WSERGS
Trigger: GGATCCTCTTTCTGACCATCAAGCCTGCTTCTTGGG...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
3UTR-3UTR TCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAACCAGGAGCTGAGGTCTaGACAATACCTTGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKPGAEV*TIPWSQ
Trigger: CTGACTCCAAGGTATTGTTCAGACCTCAGCTCCTGG...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
3UTR-3UTR CCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGATCTGCCTCAGGTGTCTaGGAATGCTGGTTAGAGGCT +
Preference number: 2 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGSASGV*ECWLEA
Trigger: AGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGA...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
3UTR-3UTR CCA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGGGCCAGGACCAGAACTaGGGAGAGAAGGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLGQDQN*GEKGGE
Trigger: CTCTCCTCCCTTCTCTCCCCAGTTCTGGTCCTGGCC...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
3UTR-3UTR GCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGAGAGAGTCCCCCAGTTTaGATATACACTGGCCTTGTC +
Preference number: 2 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGESPPV*IYTGLV
Trigger: GACAAGGCCAGTGTATATGCAAACTGGGGGACTCTC...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
3UTR-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCCACTGGCCTTGTCTCTaGAATGGTGATGGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIHWPCL*NGDGPA
Trigger: GGCTGGGCCATCACCATTCCAGAGACAAGGCCAGTG...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
3UTR-3UTR TCA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGTGCTCCACTGACTGGTaGTGGAAGCACTGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLCSTDW*WKHCLP
Trigger: GGGAAGACAGTGCTTCCATCACCAGTCAGTGGAGCA...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
3UTR-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCTTTCCTCCTCCTGGGTaGAACAGTCAGGGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIFPPPG*NSQGKG
Trigger: TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAA...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
3UTR CAA 90 bp AGGGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTaGCCCAAGGTTAAGAAGCTGGTGGAACTTGATTTCAGAACCCAG +
Preference number: 2 (lower is better)
Translates to: RESGLGLESGEDQNV*PKVKKLVELDFRTQ
Trigger: CTGGGTTCTGAAATCAAGTTCCACCAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
3UTR-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAGGTGTCTGGGAATGCTaGTTAGAGGCTACCAGGGAG +
Preference number: 2 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKGVWEC*LEATRE
Trigger: CTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACC...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
3UTR-3UTR CCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGAAGTTTGCATATACACTaGCCTTGTCTCTGGAATGGT +
Preference number: 2 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGSLHIH*PCLWNG
Trigger: ACCATTCCAGAGACAAGGCCAGTGTATATGCAAACT...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
3UTR-3UTR TCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAACCAGGAGCTGAGGTCTaGACAATACCTTGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKPGAEV*TIPWSQ
Trigger: CTGACTCCAAGGTATTGTTCAGACCTCAGCTCCTGG...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
3UTR-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAGAAGTTTCCTCCTCCTaGGTGGAACAGTCAGGGGAA +
Preference number: 2 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKEVSSS*VEQSGE
Trigger: TTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTC...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
3UTR-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAAGTTTGCATATACACTaGCCTTGTCTCTGGAATGGT +
Preference number: 2 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKSLHIH*PCLWNG
Trigger: ACCATTCCAGAGACAAGGCCAGTGTATATGCAAACT...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
3UTR-3UTR CCA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGTTTCCTCCTCCTGGGTaGAACAGTCAGGGGAAGGGA +
Preference number: 2 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGFPPPG*NSQGKG
Trigger: TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAA...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452825.7
3UTR-3UTR GCA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGGCCCATCCATCTATCTaGCTCAGGTGTCTGGGAATG +
Preference number: 2 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGAHPSI*LRCLGM
Trigger: CATTCCCAGACACCTGAGGCAGATAGATGGATGGGC...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
3UTR-3UTR CCA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGGAATTATGCAGTAGATaGGTTAGACAGGAAAACATT +
Preference number: 2 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGELCSR*VRQENI
Trigger: AATGTTTTCCTGTCTAACCCATCTACTGCATAATTC...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
3UTR CCA 72 bp CCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTaGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGG +
Preference number: 3 (lower is better)
Translates to: PIHLSASGVWEC*LEATREGRLQG
Trigger: CCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
3UTR CCA 72 bp AGGGCATCAACTGGGGGAGGTTGTAGTGTAGGAGTTTaGGTGAGGGGGCCCGAGCCCATCTGTTTGGACTTG +
Preference number: 3 (lower is better)
Translates to: RASTGGGCSVGV*VRGPEPICLDL
Trigger: CAAGTCCAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTACACTACAACCTCCCCCAGTTGATGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452825.7
3UTR TCA 72 bp AGGGAGGGAAGACTCCAGGGGCCGGCCCCCAGGAGCTaGGGTCTGAACAATACCTTGGAGTCAGAATACAAA +
Preference number: 3 (lower is better)
Translates to: REGRLQGPAPRS*GLNNTLESEYK
Trigger: TTTGTATTCTGACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTTCCCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
3UTR GCA 72 bp CAGCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATaGTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAG +
Preference number: 3 (lower is better)
Translates to: QPIHLSASGVWE*WLEATREGRLQ
Trigger: CTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
3UTR CCA 72 bp GAGAAGGGAGGAGAGTCCCCCAGTTTGCATATACACTaGCCTTGTCTCTGGAATGGTGATGGCCCAGCCCCA +
Preference number: 3 (lower is better)
Translates to: EKGGESPSLHIH*PCLWNGDGPAP
Trigger: TGGGGCTGGGCCATCACCATTCCAGAGACAAGGCCAGTGTATATGCAAACTGGGGGACTCTCCTCCCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
3UTR-3UTR CAA 90 bp GGGGGAGGTTGTAGTGTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGAGAAGCTGGTGGAACTaGATTTCAGAACCCAGAGCT +
Preference number: 3 (lower is better)
Translates to: GGGCSVGVWVRGPEPICLRSWWN*ISEPRA
Trigger: AGCTCTGGGTTCTGAAATCAAGTTCCACCAGCTTCT...CAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTACACTACAACCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452825.7
3UTR-3UTR CAA 90 bp GGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTGGAGAGTCCCCCAGTTaGCATATACACTGGCCTTGT +
Preference number: 3 (lower is better)
Translates to: GKWLGVRVGGGSECLAQGGESPS*HIHWPC
Trigger: ACAAGGCCAGTGTATATGCAAACTGGGGGACTCTCC...ACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452825.7
3UTR-3UTR CAA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCGGAGAGTCCCCCAGTTaGCATATACACTGGCCTTGT +
Preference number: 3 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIGESPS*HIHWPC
Trigger: ACAAGGCCAGTGTATATGCAAACTGGGGGACTCTCC...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
3UTR CCA 72 bp AGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGGTaGAACTTGATTTCAGAACCCAGAGCTCCCTGGCTT +
Preference number: 3 (lower is better)
Translates to: RIRMSCPRLRSW*NLISEPRAPWL
Trigger: AAGCCAGGGAGCTCTGGGTTCTGAAATCAAGTTCCACCAGCTTCTTAACCTTGGGCAAGACATTCTGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452825.7
3UTR-3UTR CAA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGGGTCTGAACAATACCTaGGAGTCAGAATACAAAAGT +
Preference number: 3 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGGLNNT*ESEYKS
Trigger: ACTTTTGTATTCTGACTCCAAGGTATTGTTCAGACC...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCCGGACCCCGGCTCCATaGTGGGCCCGAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPRTPAP*WARGLG
Trigger: GCCCAGACCTCGGGCCCACCATGGAGCCGGGGTCCG...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCGGCCAGCAGTGGGGATaGGGTGGGATTGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPGQQWG*GGIGPR
Trigger: CCGAGGCCCAATCCCACCTCATCCCCACTGCTGGCC...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCGGTGGGCCCGAGGTCTaGGCCAGGGATCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPAGGPEV*ARDREA
Trigger: AGCCTCCCGATCCCTGGCCCAGACCTCGGGCCCACC...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCAGCAGTGCCAGGATaGTCTCCAGGCGCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPAPAVPG*SPGAGA
Trigger: GGCGCCCGCGCCTGGAGACCATCCTGGCACTGCTGG...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCTGTGGGCAGGGCAGATaGAGCCGGGGAGTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPCGQGR*SRGVRV
Trigger: CACTCTGACTCCCCGGCTGCATCTGCCCTGCCCACA...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAACCCCGGCTCCATGGTaGGCCCGAGGTCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGTPAPW*ARGLGQ
Trigger: CTGGCCCAGACCTCGGGCCCACCATGGAGCCGGGGT...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCGTGGCCGTCGTGCTCTaGGAGTCTCAGGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPVAVVL*ESQADS
Trigger: AGAGTCAGCCTGAGACTCTCAGAGCACGACGGCCAC...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAGGCGCCGCCGCTGTTTaGAGCCGAGGCAATGCTCGG +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGGAAAV*SRGNAR
Trigger: CCGAGCATTGCCTCGGCTTCAAACAGCGGCGGCGCC...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCGAGGAGGCGAGGCACTaGCACACACCGCCCATGGAA +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPAEEARH*HTPPME
Trigger: TTCCATGGGCGGTGTGTGTCAGTGCCTCGCCTCCTC...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCCAGATCTCTCTTACCTaGGCCCTCCTCCGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPQISLT*ALLRGY
Trigger: GTAGCCCCGGAGGAGGGCTCAGGTAAGAGAGATCTG...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCGGTCCCCCTCCATCATaGGCTCCTCCAAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVGPPPS*APPRGP
Trigger: GGGCCCCCTTGGAGGAGCTCATGATGGAGGGGGACC...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCTCAGCCTCTGGCCCTaGGCTCCGTACCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPALSLWP*APYPLW
Trigger: CCAAAGAGGGTACGGAGCTCAGGGCCAGAGGCTGAG...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGAAGGGGCCGAGGGGCCTaGAGTGGTCCCTTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGRGRGA*SGPFRR
Trigger: CCGGCGGAAGGGACCACTTCAGGCCCCTCGGCCCCT...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCGGCGTGTGGCCGTCGTaGTCTGAGAGTCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPAGVWPS*SESLRL
Trigger: CAGCCTGAGACTCTCAGAGCACGACGGCCACACGCC...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAGACCAGCCACCCTGTaGGGGCCAGCTTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGRPATL*GPASWP
Trigger: CGGCCAGGAAGCTGGCCCCCACAGGGTGGCTGGTCT...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCGCTTACACTCCGCCATaGCACACTTTGGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPAAYTPP*HTLGTA
Trigger: GGCGGTGCCCAAAGTGTGTCATGGCGGAGTGTAAGC...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCTGGGCCTCGGAGAGCTaGGGAGGCGAGGCACTGACA +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVWASES*GGEALT
Trigger: TGTCAGTGCCTCGCCTCCTCAGCTCTCCGAGGCCCA...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGAGGGGCCGAGGGGCCTaGAGTGGTCCCTTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQRGRGA*SGPFRR
Trigger: CCGGCGGAAGGGACCACTTCAGGCCCCTCGGCCCCT...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACAGCAGCTCCAGATCTaGGCCCTCCTCCGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGQQLQI*ALLRGY
Trigger: GTAGCCCCGGAGGAGGGCTCAGATCTGGAGCTGCTG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp GGGGGAGGTTGTAGTGTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGGGTTCCGGATCAGGCTaGAGTCTCTTGGCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GGGCSVGVWVRGPEPICLGSGSG*SLLARR
Trigger: CCGGCGGGCCAAGAGACTGCAGCCTGATCCGGAACC...CAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTACACTACAACCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAACCCCGGCTCCATGGTaGGCCCGAGGTCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPTPAPW*ARGLGQ
Trigger: CTGGCCCAGACCTCGGGCCCACCATGGAGCCGGGGT...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp AACCTGAAGTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGACGGACCCCGGCTCCATaGTGGGCCCGAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: NLKLSTSTAKGGCQSQSGRTPAP*WARGLG
Trigger: GCCCAGACCTCGGGCCCACCATGGAGCCGGGGTCCG...TCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAACTTCAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR CCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCACCAGCAGTGCCAGGATaGTCTCCAGGCGCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPPAVPG*SPGAGA
Trigger: GGCGCCCGCGCCTGGAGACCATCCTGGCACTGCTGG...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACCGAGGGGCCTGAAGTaGTCCCTTCCGCCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGPRGLK*SLPPVP
Trigger: TGGAACCGGCGGAAGGGACCACTTCAGGCCCCTCGG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACAAGGGACTCAGGGGTaGGCGGGTAGCAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGQGTQG*AGSRDG
Trigger: GCCATCCCTGCTACCCGCCCACCCCTGAGTCCCTTG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGCCAGCAGTGGGGATaGGGTGGGATTGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPGQQWG*GGIGPR
Trigger: CCGAGGCCCAATCCCACCTCATCCCCACTGCTGGCC...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGTCCCCCTCCATCATaGGCTCCTCCAAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPGPPPS*APPRGP
Trigger: GGGCCCCCTTGGAGGAGCTCATGATGGAGGGGGACC...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCTCCAAACTGTGTGGTTaGCTCCCCACTACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPASKLCG*LPTTAA
Trigger: GGCTGCGGTAGTGGGGAGGCAACCACACAGTTTGGA...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCGGCGGTAGTGCTCAATaGACTGGCGCCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVGGSAQ*TGAQQA
Trigger: TGCCTGCTGGGCGCCAGTGCATTGAGCACTACCGCC...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCGATACCGCAGGTACTaGCGGCTACTGGAGCACTTG +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPARYRRY*RLLEHL
Trigger: CAAGTGCTCCAGTAGCCGGCAGTACCTGCGGTATCG...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCACCGGCTGCGCTTGGTaGTGTCTGAGCCGGCATCTG +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVTGCAW*CLSRHL
Trigger: CAGATGCCGGCTCAGACAGCACCAAGCGCAGCCGGT...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp AACCTGAAGTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGAACCCCGGCTCCATGGTaGGCCCGAGGTCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: NLKLSTSTAKGGCQSQSGTPAPW*ARGLGQ
Trigger: CTGGCCCAGACCTCGGGCCCACCATGGAGCCGGGGT...TCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAACTTCAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACTGCCAGTCCGCGGGTaGGCGGATCTTGCAAATGCC +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGLPVRG*ADLANA
Trigger: GGCATTTGCAAGATCCGCCCACCCGCGGACTGGCAG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACAGGCTGCAGTCTCTTaGCCCGCCGGCCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGQAAVS*PAGHSC
Trigger: ACAGCTATGGCCGGCGGGCCAAGAGACTGCAGCCTG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGGGGAGGTTGTAGTGTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGCAGGCTGCAGTCTCTTaGCCCGCCGGCCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: GGGCSVGVWVRGPEPICLQAAVS*PAGHSC
Trigger: ACAGCTATGGCCGGCGGGCCAAGAGACTGCAGCCTG...CAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTACACTACAACCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCAGGCCCATCATCTTaGGGCCTGCCCCATAGATCT +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPAPGPSS*GLPHRS
Trigger: AGATCTATGGGGCAGGCCCCAAGATGATGGGCCTGG...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCTGGCGCTCATCATCTaGGAGCAGCTCGAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPALALII*EQLESL
Trigger: GAGGCTTTCGAGCTGCTCCCAGATGATGAGCGCCAG...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGAAGACCAGCCACCCTGTaGGGGCCAGCTTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGRPATL*GPASWP
Trigger: CGGCCAGGAAGCTGGCCCCCACAGGGTGGCTGGTCT...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCGTGGATGCTTCTGCCTaGCCTCCAGGCAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVVDASA*PPGRGG
Trigger: CCCACCTCTGCCTGGAGGCCAGGCAGAAGCATCCAC...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTCCAGCAGTGCCAGGATaGTCTCCAGGCGCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: GKWLGVRVGGGSECLAQGPAVPG*SPGAGA
Trigger: GGCGCCCGCGCCTGGAGACCATCCTGGCACTGCTGG...ACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGACTGAGGCGGCTGCTGTaGGCAGGGCAGATGCAGCCG +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGLRRLL*AGQMQP
Trigger: CGGCTGCATCTGCCCTGCCCACAGCAGCCGCCTCAG...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCACTGGCCTTGTCTCTaGAATGGTGATGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPAHWPCL*NGDGPA
Trigger: GGCTGGGCCATCACCATTCCAGAGACAAGGCCAGTG...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp AACCTGAAGTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGAGGCGCCGCCGCTGTTTaGAGCCGAGGCAATGCTCGG +
Preference number: 4 (lower is better)
Translates to: NLKLSTSTAKGGCQSQSGGAAAV*SRGNAR
Trigger: CCGAGCATTGCCTCGGCTTCAAACAGCGGCGGCGCC...TCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAACTTCAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR TCA 90 bp GTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGAAGGCTTCCTGCCTGGTGGATAGTTaGGGCGCTGGGCTACCCGAG +
Preference number: 4 (lower is better)
Translates to: VVHFHSKGWLPVPVWKASCLVDS*GAGLPE
Trigger: CTCGGGTAGCCCAGCGCCTCAACTATCCACCAGGCA...GGAAGCCTTCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR TCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACAGGGTTCTGGGCTGTaGCTCAGCTCCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGQGSGL*LSSSLL
Trigger: GAGCAAGGAGGAGCTGAGTCACAGCCCAGAACCCTG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGGGGAGGTTGTAGTGTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGGCTTACACTCCGCCATaGCACACTTTGGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: GGGCSVGVWVRGPEPICLAYTPP*HTLGTA
Trigger: GGCGGTGCCCAAAGTGTGTCATGGCGGAGTGTAAGC...CAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTACACTACAACCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCCCAACAGTCCTCGCATaGCAGCCAAGGTGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVPTVLA*QPRCPF
Trigger: GAAGGGGCACCTTGGCTGTCATGCGAGGACTGTTGG...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGATGGGCCTCGGAGAGCTaGGGAGGCGAGGCACTGACA +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGWASES*GGEALT
Trigger: TGTCAGTGCCTCGCCTCCTCAGCTCTCCGAGGCCCA...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTGGTCCCCCTCCATCATaGGCTCCTCCAAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GKWLGVRVGGGSECLAQGGPPPS*APPRGP
Trigger: GGGCCCCCTTGGAGGAGCTCATGATGGAGGGGGACC...ACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGACAGCAAAGGGTGGCTaGCAGTCCGCGGGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQTAKGG*QSAGGR
Trigger: CCGCCCACCCGCGGACTGGCAGCCACCCTTTGCTGT...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAGGTTCCGGATCAGGCTaGAGTCTCTTGGCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKGSGSG*SLLARR
Trigger: CCGGCGGGCCAAGAGACTGCAGCCTGATCCGGAACC...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAGTGTGGCTGGTGGATaGTTCTGCCTGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGSVAGG*FCLASR
Trigger: CCTGGAGGCCAGGCAGAAGCATCCACCAGCCACACT...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGATGCCTGGCGCGGCCTTaGCAGCTGATGGCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGCLARP*QLMALS
Trigger: AGAGAGGGCCATCAGCTGGCAAGGCCGCGCCAGGCA...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp AGTTCAGTTTCACTCTCGTCTGGGCCTCTAGCTCATTCAGCCTCTGGATTCGGGGGTGGGCCCGAGGTCTaGGCCAGGGATCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSVSLSSGPLAHSASGFGGGPEV*ARDREA
Trigger: AGCCTCCCGATCCCTGGCCCAGACCTCGGGCCCACC...CCCGAATCCAGAGGCTGAATGAGCTAGAGGCCCAGACGAGAGTGAAACTGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR CCA 90 bp AGGATAAACTGGAGGGCATCAACTGGGGGAGGTTGTAGTGTAGGAGTTTGGGTGCGGACCCCGGCTCCATaGTGGGCCCGAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RINWRASTGGGCSVGVWVRTPAP*WARGLG
Trigger: GCCCAGACCTCGGGCCCACCATGGAGCCGGGGTCCG...CACCCAAACTCCTACACTACAACCTCCCCCAGTTGATGCCCTCCAGTTTATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCCAGCGTTCAGCAATaGTCAGCAGTTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPAPSVQQ*SAVPAA
Trigger: AGCTGCAGGAACTGCTGACCATTGCTGAACGCTGGG...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCGCCGGCATCTGCACATaGGCAGAGAACCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVAGICT*AENLQQ
Trigger: CTGCTGGAGGTTCTCTGCCCATGTGCAGATGCCGGC...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCAGCTCTTCCTCCTCCTaGACCTCCTCAGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVSSSSS*TSSASG
Trigger: GCCAGAGGCTGAGGAGGTCCAGGAGGAGGAAGAGCT...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAGGTTCTCCTGGGTGCTaGGGCTGCCAGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKGSPGC*GCQWWG
Trigger: TCCCCACCACTGGCAGCCCCAGCACCCAGGAGAACC...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCGAAGTTTCCTCCTCCTaGGTGGAACAGTCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPEVSSS*VEQSGE
Trigger: TTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTC...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACTGAGAGTCTCAGGCTaGCTCTACTGCTACCGCCTC +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGLRVSG*LYCYRL
Trigger: GAGGCGGTAGCAGTAGAGTCAGCCTGAGACTCTCAG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCTCTCTGCGATGGGCCTaGTTTTCGCGATGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPASLRWA*FSRCSQ
Trigger: TTGGCTACATCGCGAAAATCAGGCCCATCGCAGAGA...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGATGCCTGGTGGATAGTTaGGGCGCTGGGCTACCCGAG +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGCLVDS*GAGLPE
Trigger: CTCGGGTAGCCCAGCGCCTCAACTATCCACCAGGCA...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAGCCGGCCATAGCTGTTaGACTTGGAAGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGAGHSC*TWKAAQ
Trigger: CTGTGCAGCCTTCCAAGTTCAACAGCTATGGCCGGC...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGGGGAGGTTGTAGTGTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGGCCGGCCATAGCTGTTaGACTTGGAAGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: GGGCSVGVWVRGPEPICLAGHSC*TWKAAQ
Trigger: CTGTGCAGCCTTCCAAGTTCAACAGCTATGGCCGGC...CAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTACACTACAACCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCTTCCTGGCCGCTaGCCAGTCCCAGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPQLPGR*PVPELG
Trigger: CCCGAGCTCTGGGACTGGTCAGCGGCCAGGAAGCTG...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCGTTCCAGAACACCCTTaGCATCCCCAATCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPAVPEHP*HPQSGA
Trigger: TGCACCAGATTGGGGATGTCAAGGGTGTTCTGGAAC...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCTCTGTTCCCCCTCCTTaGAGGCCACGATCACAGAGC +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVSVPPP*RPRSQS
Trigger: GCTCTGTGATCGTGGCCTTCAAGGAGGGGGAACAGA...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGAGGAGGCGAGGCACTaGCACACACCGCCCATGGAA +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPEEARH*HTPPME
Trigger: TTCCATGGGCGGTGTGTGTCAGTGCCTCGCCTCCTC...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCTCCAAACTGTGTGGTTaGCTCCCCACTACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVSKLCG*LPTTAA
Trigger: GGCTGCGGTAGTGGGGAGGCAACCACACAGTTTGGA...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCGGACGTGTGTTACACTaGACAAGGTTGGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPAGRVLH*TRLAPD
Trigger: GTCTGGAGCCAACCTTGTGCAGTGTAACACACGTCC...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375401.8
CDS-3UTR GCA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCTCTTCGGGGGTTAGGTaGCGTTTACTGTCACTGACA +
Preference number: 4 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPSSGVR*RLLSLT
Trigger: TGTCAGTGACAGTAAACGGCACCTAACCCCCGAAGA...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAACCGGCTGCGCTTGGTaGTGTCTGAGCCGGCATCTG +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPTGCAW*CLSRHL
Trigger: CAGATGCCGGCTCAGACAGCACCAAGCGCAGCCGGT...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCACGCACAGGCAGTCTCTaGAGGGCTACCAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPRTGSL*RATSSA
Trigger: GGCACTGCTGGTAGCCCTGCAGAGACTGCCTGTGCG...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGGACTTGAGGGAAAGTCGCACAGGCAGTCTCTaGAGGGCTACCAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VGVWVRGPEPICLDLRESRTGSL*RATSSA
Trigger: GGCACTGCTGGTAGCCCTGCAGAGACTGCCTGTGCG...ACTTTCCCTCAAGTCCAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCGCCCATCCATCTATCTaGCTCAGGTGTCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPAAHPSI*LRCLGM
Trigger: CATTCCCAGACACCTGAGGCAGATAGATGGATGGGC...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GGGGGAGGTTGTAGTGTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGAGGGATCGGGAGGCTTaGACCGCCCTTAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: GGGCSVGVWVRGPEPICLRDREA*TALKDS
Trigger: TGAGTCCTTAAGGGCGGTCCAAGCCTCCCGATCCCT...CAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTACACTACAACCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCGGTGGGCCCGAGGTCTaGGCCAGGGATCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIGGPEV*ARDREA
Trigger: AGCCTCCCGATCCCTGGCCCAGACCTCGGGCCCACC...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACCCCGGCTCCATGGTaGGCCCGAGGTCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQITPAPW*ARGLGQ
Trigger: CTGGCCCAGACCTCGGGCCCACCATGGAGCCGGGGT...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCAGTTTCACTCTCGTCTaGGCCTCTAGCTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPSFTLV*ASSSFS
Trigger: GCTGAATGAGCTAGAGGCCCAGACGAGAGTGAAACT...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACGCCATGACACACTTTaGGCACCGCCAGACACCCTT +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGRHDTL*APPDTL
Trigger: AAGGGTGTCTGGCGGTGCCCAAAGTGTGTCATGGCG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAGCCAAAGGCTTCTaGGGGCCGCTTACACTCCGC +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGKAKGF*GPLTLR
Trigger: GCGGAGTGTAAGCGGCCCCCAGAAGCCTTTGGCTTT...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAGGTTCCAAGCCATTCTaGTTCTCCTGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGGSKPF*FSWVLG
Trigger: CCCCAGCACCCAGGAGAACCAGAATGGCTTGGAACC...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGCAAGGGACTCAGGGGTaGGCGGGTAGCAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQQGTQG*AGSRDG
Trigger: GCCATCCCTGCTACCCGCCCACCCCTGAGTCCCTTG...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACACCACAATCGCGGGTaGGCGGATCTTGCAAATGCC +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGHHNRG*ADLANA
Trigger: GGCATTTGCAAGATCCGCCCACCCGCGATTGTGGTG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp AGGATAAACTGGAGGGCATCAACTGGGGGAGGTTGTAGTGTAGGAGTTTGGGTGGGCGCCGCCGCTGTTTaGAGCCGAGGCAATGCTCGG +
Preference number: 4 (lower is better)
Translates to: RINWRASTGGGCSVGVWVGAAAV*SRGNAR
Trigger: CCGAGCATTGCCTCGGCTTCAAACAGCGGCGGCGCC...CACCCAAACTCCTACACTACAACCTCCCCCAGTTGATGCCCTCCAGTTTATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCACAGGGTTCTGGGCTGTaGCTCAGCTCCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPQGSGL*LSSSLL
Trigger: GAGCAAGGAGGAGCTGAGTCACAGCCCAGAACCCTG...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAGCTTACACTCCGCCATaGCACACTTTGGGCACCGCC +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKAYTPP*HTLGTA
Trigger: GGCGGTGCCCAAAGTGTGTCATGGCGGAGTGTAAGC...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGGGGAGGTTGTAGTGTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGGCCGTTTACTGTCACTaGCAGGGAAACCGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GGGCSVGVWVRGPEPICLAVYCH*QGNRCQ
Trigger: TTGGCAGCGGTTTCCCTGTCAGTGACAGTAAACGGC...CAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTACACTACAACCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGACTCGCTCAGCCTCTGTaGTACCCTTCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGLAQPL*YPSPAG
Trigger: CCCTGCTGGAGAAGGGTATCACAGAGGCTGAGCGAG...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCCAGCTTCCTGGCCGCTaGCCAGTCCCAGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIQLPGR*PVPELG
Trigger: CCCGAGCTCTGGGACTGGTCAGCGGCCAGGAAGCTG...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCACCAACAGTCCTCGCATaGCAGCCAAGGTGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPPTVLA*QPRCPF
Trigger: GAAGGGGCACCTTGGCTGTCATGCGAGGACTGTTGG...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp GGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTGAGGAGGCGAGGCACTaGCACACACCGCCCATGGAA +
Preference number: 4 (lower is better)
Translates to: GKWLGVRVGGGSECLAQGEEARH*HTPPME
Trigger: TTCCATGGGCGGTGTGTGTCAGTGCCTCGCCTCCTC...ACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp AGGATAAACTGGAGGGCATCAACTGGGGGAGGTTGTAGTGTAGGAGTTTGGGTGGGCCAGCAGTGGGGATaGGGTGGGATTGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RINWRASTGGGCSVGVWVGQQWG*GGIGPR
Trigger: CCGAGGCCCAATCCCACCTCATCCCCACTGCTGGCC...CACCCAAACTCCTACACTACAACCTCCCCCAGTTGATGCCCTCCAGTTTATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAATGTCACAACTGTTGCTaGGGCGGCTGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKCHNCC*GGCCGQ
Trigger: CTGCCCACAGCAGCCGCCTCAGCAACAGTTGTGACA...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACTACAGCTGCTCCACTaGCTGGTGATGGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGLQLLH*LVMEAL
Trigger: CAGTGCTTCCATCACCAGTCAGTGGAGCAGCTGTAG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp GTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGAAGGCTTCCTCCAAACTGTGTGGTTaGCTCCCCACTACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: VVHFHSKGWLPVPVWKASSKLCG*LPTTAA
Trigger: GGCTGCGGTAGTGGGGAGGCAACCACACAGTTTGGA...GGAAGCCTTCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR GCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGCGGTAGTGCTCAATaGACTGGCGCCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQGGSAQ*TGAQQA
Trigger: TGCCTGCTGGGCGCCAGTGCATTGAGCACTACCGCC...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCATGGTCAGCAGTTCCTaGAGCTCGGCCTGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVMVSSS*SSAWAL
Trigger: TAAAGCCCAGGCCGAGCTGCAGGAACTGCTGACCAT...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAATGGTCAGCAGTTCCTaGAGCTCGGCCTGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGMVSSS*SSAWAL
Trigger: TAAAGCCCAGGCCGAGCTGCAGGAACTGCTGACCAT...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTACCGGCTGCGCTTGGTaGTGTCTGAGCCGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GKWLGVRVGGGSECLAQGTGCAW*CLSRHL
Trigger: CAGATGCCGGCTCAGACAGCACCAAGCGCAGCCGGT...ACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGCAGGGCTACCAGCAGTaGCAGGATGGTCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQQGYQQ*QDGLQA
Trigger: CGCCTGGAGACCATCCTGGCACTGCTGGTAGCCCTG...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGCAAGGGGGCCCGGGTTaGCTCAGGCAGTTCCAACAC +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQQGGPG*LRQFQH
Trigger: GTGTTGGAACTGCCTGAGGCAACCCGGGCCCCCTTG...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGTGTGGGCAGGGCAGATaGAGCCGGGGAGTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQCGQGR*SRGVRV
Trigger: CACTCTGACTCCCCGGCTGCATCTGCCCTGCCCACA...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAACGGACCCCGGCTCCATaGTGGGCCCGAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKRTPAP*WARGLG
Trigger: GCCCAGACCTCGGGCCCACCATGGAGCCGGGGTCCG...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCCCCAGCGTTCAGCAATaGTCAGCAGTTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVPSVQQ*SAVPAA
Trigger: AGCTGCAGGAACTGCTGACCATTGCTGAACGCTGGG...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAGCCGGCATCTGCACATaGGCAGAGAACCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKAGICT*AENLQQ
Trigger: CTGCTGGAGGTTCTCTGCCCATGTGCAGATGCCGGC...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCCGAGGGGCCTGAAGTaGTCCCTTCCGCCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPPRGLK*SLPPVP
Trigger: TGGAACCGGCGGAAGGGACCACTTCAGGCCCCTCGG...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGACTGAGAGTCTCAGGCTaGCTCTACTGCTACCGCCTC +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGLRVSG*LYCYRL
Trigger: GAGGCGGTAGCAGTAGAGTCAGCCTGAGACTCTCAG...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAGTTCCAGAACACCCTTaGCATCCCCAATCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGVPEHP*HPQSGA
Trigger: TGCACCAGATTGGGGATGTCAAGGGTGTTCTGGAAC...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTCCAACAGTCCTCGCATaGCAGCCAAGGTGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GKWLGVRVGGGSECLAQGPTVLA*QPRCPF
Trigger: GAAGGGGCACCTTGGCTGTCATGCGAGGACTGTTGG...ACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCTGGGCCTCGGAGAGCTaGGGAGGCGAGGCACTGACA +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIWASES*GGEALT
Trigger: TGTCAGTGCCTCGCCTCCTCAGCTCTCCGAGGCCCA...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGCAGATCTCTCTTACCTaGGCCCTCCTCCGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQQISLT*ALLRGY
Trigger: GTAGCCCCGGAGGAGGGCTCAGGTAAGAGAGATCTG...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGCGAGCCCGACTCCCGTaGCGCTCTGCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGRARLP*RSAFSS
Trigger: GCTGGAGAAGGCAGAGCGTCACGGGAGTCGGGCTCG...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCTCAGCCTCTGGCCCTaGGCTCCGTACCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPLSLWP*APYPLW
Trigger: CCAAAGAGGGTACGGAGCTCAGGGCCAGAGGCTGAG...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACCAGGAGCTGAGGTCTaGACAATACCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGPGAEV*TIPWSQ
Trigger: CTGACTCCAAGGTATTGTTCAGACCTCAGCTCCTGG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCGGCGGATCTTGCAAATaGCCGATTTCTCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVGGSCK*PISLRW
Trigger: CCATCGCAGAGAAATCGGGCATTTGCAAGATCCGCC...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAGGCGGATCTTGCAAATaGCCGATTTCTCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGGGSCK*PISLRW
Trigger: CCATCGCAGAGAAATCGGGCATTTGCAAGATCCGCC...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTAGTGTGGCTGGTGGATaGTTCTGCCTGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GKWLGVRVGGGSECLAQGSVAGG*FCLASR
Trigger: CCTGGAGGCCAGGCAGAAGCATCCACCAGCCACACT...ACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAAGGGGGCCCGGGTTaGCTCAGGCAGTTCCAACAC +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPQGGPG*LRQFQH
Trigger: GTGTTGGAACTGCCTGAGGCAACCCGGGCCCCCTTG...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAACTCCCGTGACGCTCTaGCTTCTCCAGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPTPVTL*LLQLQK
Trigger: CTTCTGGAGCTGGAGAAGGCAGAGCGTCACGGGAGT...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGATCAGGTGTCTGGGAATaGTGGTTAGAGGCTACCAGG +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGSGVWE*WLEATR
Trigger: CCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGA...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGATTCTTCCAAACTGTGTaGTTGCCTCCCCACTACCGC +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGFFQTV*LPPHYR
Trigger: GCGGTAGTGGGGAGGCAACCACACAGTTTGGAAGAA...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAGCCCTTAAGGACTCATaGCGCCGCCGCTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKALKDS*RRRCLK
Trigger: CTTCAAACAGCGGCGGCGCCATGAGTCCTTAAGGGC...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGAAGGGATCGGGAGGCTTaGACCGCCCTTAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGRDREA*TALKDS
Trigger: TGAGTCCTTAAGGGCGGTCCAAGCCTCCCGATCCCT...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAGGTGGGCCCGAGGTCTaGGCCAGGGATCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKGGPEV*ARDREA
Trigger: AGCCTCCCGATCCCTGGCCCAGACCTCGGGCCCACC...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCACCAGGCCCATCATCTTaGGGCCTGCCCCATAGATCT +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPPGPSS*GLPHRS
Trigger: AGATCTATGGGGCAGGCCCCAAGATGATGGGCCTGG...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAGTTTGTGCGGACAACTaGCACACCATGGGACATGAG +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGVCADN*HTMGHE
Trigger: CTCATGTCCCATGGTGTGCCAGTTGTCCGCACAAAC...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGACCAGCCACCCTGTaGGGGCCAGCTTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGRPATL*GPASWP
Trigger: CGGCCAGGAAGCTGGCCCCCACAGGGTGGCTGGTCT...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCTGTTCCACCTGCCGCTaGAGCTGCTGGGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQICSTCR*SCWASG
Trigger: GCCTGAGGCCCAGCAGCTCCAGCGGCAGGTGGAACA...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp AGGATAAACTGGAGGGCATCAACTGGGGGAGGTTGTAGTGTAGGAGTTTGGGTGTGTTCCACCTGCCGCTaGAGCTGCTGGGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RINWRASTGGGCSVGVWVCSTCR*SCWASG
Trigger: GCCTGAGGCCCAGCAGCTCCAGCGGCAGGTGGAACA...CACCCAAACTCCTACACTACAACCTCCCCCAGTTGATGCCCTCCAGTTTATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCGCCTCCAGGCAGAGGTaGGCTTTCTCCTCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPASRQR*AFSSQR
Trigger: ACGCTGGGAGGAGAAAGCCCACCTCTGCCTGGAGGC...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAACTCAAGTGTGGCTGGTaGATGCTTCTGCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKLKCGW*MLLPGL
Trigger: GAGGCCAGGCAGAAGCATCCACCAGCCACACTTGAG...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCGGTTCTCCTGGGTGCTaGGGCTGCCAGTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIGSPGC*GCQWWG
Trigger: TCCCCACCACTGGCAGCCCCAGCACCCAGGAGAACC...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGCTGAGGCGGCTGCTGTaGGCAGGGCAGATGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGLRRLL*AGQMQP
Trigger: CGGCTGCATCTGCCCTGCCCACAGCAGCCGCCTCAG...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGACACTGGCCTTGTCTCTaGAATGGTGATGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGHWPCL*NGDGPA
Trigger: GGCTGGGCCATCACCATTCCAGAGACAAGGCCAGTG...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGCCAGGACCAGAACTaGGGAGAGAAGGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQGQDQN*GEKGGE
Trigger: CTCTCCTCCCTTCTCTCCCCAGTTCTGGTCCTGGCC...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAGGGGTTAGTGTAGCATaGCCTGGCCAGGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKGVSVA*PGQDQN
Trigger: GTTCTGGTCCTGGCCAGGCCATGCTACACTAACCCC...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCCGCCGCCGCCATCTTaGTTTGTCAGCGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPPPPPS*FVSVSP
Trigger: AGGGGAGACGCTGACAAACCAAGATGGCGGCGGCGG...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp AACCTGAAGTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGATACACCTGCCGCGGGTaGGCGGATCTTGCAAATGCC +
Preference number: 4 (lower is better)
Translates to: NLKLSTSTAKGGCQSQSGYTCRG*ADLANA
Trigger: GGCATTTGCAAGATCCGCCCACCCGCGGCAGGTGTA...TCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAACTTCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR CCA 90 bp GTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGAAGGCTTCCCTGCCAGTCCCAGTCTaGAAGGCTTCCTGTAGATCC +
Preference number: 4 (lower is better)
Translates to: VVHFHSKGWLPVPVWKASLPVPV*KASCRS
Trigger: GGATCTACAGGAAGCCTTCCAGACTGGGACTGGCAG...GGAAGCCTTCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429877.5
3UTR CAA 72 bp GTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTaGGACTTGAGGGAAAGTGGCTTGGGGTTAGAGTCG +
Preference number: 4 (lower is better)
Translates to: VGVWVRGPEPIC*DLRESGLGLES
Trigger: CGACTCTAACCCCAAGCCACTTTCCCTCAAGTCCAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAGGCGCCGCCGCTGTTTaGAGCCGAGGCAATGCTCGG +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKGAAAV*SRGNAR
Trigger: CCGAGCATTGCCTCGGCTTCAAACAGCGGCGGCGCC...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAGGTCTTAGGCGATGTTaGCTCCACCTTCACATCCCC +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKGLRRC*LHLHIP
Trigger: GGGGATGTGAAGGTGGAGTCAACATCGCCTAAGACC...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCATCCGGCAGACATATaGCTCAATAAACTGGGCATT +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPAHPADI*LNKLGI
Trigger: AATGCCCAGTTTATTGAGTCATATGTCTGCCGGATG...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACAGCAGTGCAAAAGTTaGCAGCCTCGGCAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGQQCKS*QPRQSC
Trigger: ACAACTTTGCCGAGGCTGTCAACTTTTGCACTGCTG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAACAGCTTCCTGGCCGCTaGCCAGTCCCAGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKQLPGR*PVPELG
Trigger: CCCGAGCTCTGGGACTGGTCAGCGGCCAGGAAGCTG...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAACGAGCCCGACTCCCGTaGCGCTCTGCCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKRARLP*RSAFSS
Trigger: GCTGGAGAAGGCAGAGCGTCACGGGAGTCGGGCTCG...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCAATGCCCGATTTCTCTaGGATGGGCCTGATTTTCGC +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVNARFL*DGPDFR
Trigger: GCGAAAATCAGGCCCATCGCAGAGAAATCGGGCATT...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAACAGCAAAGGGTGGCTaGCAGTCCGCGGGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKTAKGG*QSAGGR
Trigger: CCGCCCACCCGCGGACTGGCAGCCACCCTTTGCTGT...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCATAGGGATAAACAATaGGTTCGTAGTGGGAGCGTA +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPAHRDKQ*VRSGSV
Trigger: TACGCTCCCACTACGAACGCATTGTTTATCCCTATG...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCACTGTCGTAGGGGGATaGTGTGGGGTTTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVTVVGG*CGVCIP
Trigger: AGGAATACAAACCCCACAGCATCCCCCTACGACAGT...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GGGGGAGGTTGTAGTGTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGACTGTCGTAGGGGGATaGTGTGGGGTTTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: GGGCSVGVWVRGPEPICLTVVGG*CGVCIP
Trigger: AGGAATACAAACCCCACAGCATCCCCCTACGACAGT...CAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTACACTACAACCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGATATTCCCGGGTAGCCTaGTCAAAGCCAAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGYSRVA*SKPKAS
Trigger: AGAAGCCTTTGGCTTTGAGCAGGCTACCCGGGAATA...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAATCTCGCCAAAGCTCTaGAGAGTGTATTCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGISPKL*RVYSRV
Trigger: TACCCGGGAATACACTCTGCAGAGCTTTGGCGAGAT...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCTCTTCGGGGGTTAGGTaGCGTTTACTGTCACTGACA +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVSSGVR*RLLSLT
Trigger: TGTCAGTGACAGTAAACGGCACCTAACCCCCGAAGA...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACGAACCTTCAGCTTATaGAGCATGGCAGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGRTFSL*SMAGSS
Trigger: TGAGCTTCCTGCCATGCTGCATAAGCTGAAGGTTCG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCAGTGTGGCTGGTGGATaGTTCTGCCTGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPSVAGG*FCLASR
Trigger: CCTGGAGGCCAGGCAGAAGCATCCACCAGCCACACT...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCCAGGGCTACCAGCAGTaGCAGGATGGTCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIQGYQQ*QDGLQA
Trigger: CGCCTGGAGACCATCCTGGCACTGCTGGTAGCCCTG...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGTGCCTGGCGCGGCCTTaGCAGCTGATGGCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGCLARP*QLMALS
Trigger: AGAGAGGGCCATCAGCTGGCAAGGCCGCGCCAGGCA...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGTCAGAAGCAGGGGCTaGAGGGTAGTTAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQVRSRG*RVVRRL
Trigger: GAGCCTCCTAACTACCCTGCAGCCCCTGCTTCTGAC...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp AACCTGAAGTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGAACAGCAAAGGGTGGCTaGCAGTCCCAGTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: NLKLSTSTAKGGCQSQSGTAKGG*QSQSGR
Trigger: CCTTCCAGACTGGGACTGGCAGCCACCCTTTGCTGT...TCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAACTTCAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR CCA 90 bp GTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGAAGGCTTCCTTCTTCCAAACTGTGTaGTTGCCTCCCCACTACCGC +
Preference number: 4 (lower is better)
Translates to: VVHFHSKGWLPVPVWKASFFQTV*LPPHYR
Trigger: GCGGTAGTGGGGAGGCAACCACACAGTTTGGAAGAA...GGAAGCCTTCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR CCA 90 bp AACCTGAAGTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGAAGGGATCGGGAGGCTTaGACCGCCCTTAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: NLKLSTSTAKGGCQSQSGRDREA*TALKDS
Trigger: TGAGTCCTTAAGGGCGGTCCAAGCCTCCCGATCCCT...TCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAACTTCAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCCAGGCTGCAGTCTCTTaGCCCGCCGGCCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIQAAVS*PAGHSC
Trigger: ACAGCTATGGCCGGCGGGCCAAGAGACTGCAGCCTG...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGCGCCATGACACACTTTaGGCACCGCCAGACACCCTT +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQRHDTL*APPDTL
Trigger: AAGGGTGTCTGGCGGTGCCCAAAGTGTGTCATGGCG...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGTGTTCCACCTGCCGCTaGAGCTGCTGGGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGCSTCR*SCWASG
Trigger: GCCTGAGGCCCAGCAGCTCCAGCGGCAGGTGGAACA...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCTCCTGCAGCTCGGCCTaGGCTTTATCCACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPSCSSA*ALSTAG
Trigger: CCCTGCTGTGGATAAAGCCCAGGCCGAGCTGCAGGA...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCGCCTCCAGGCAGAGGTaGGCTTTCTCCTCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIASRQR*AFSSQR
Trigger: ACGCTGGGAGGAGAAAGCCCACCTCTGCCTGGAGGC...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGGCCTCCAGGCAGAGGTaGGCTTTCTCCTCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLASRQR*AFSSQR
Trigger: ACGCTGGGAGGAGAAAGCCCACCTCTGCCTGGAGGC...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp AGGATAAACTGGAGGGCATCAACTGGGGGAGGTTGTAGTGTAGGAGTTTGGGTGGTGGATGCTTCTGCCTaGCCTCCAGGCAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RINWRASTGGGCSVGVWVVDASA*PPGRGG
Trigger: CCCACCTCTGCCTGGAGGCCAGGCAGAAGCATCCAC...CACCCAAACTCCTACACTACAACCTCCCCCAGTTGATGCCCTCCAGTTTATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGCTCAAGTGTGGCTGGTaGATGCTTCTGCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQLKCGW*MLLPGL
Trigger: GAGGCCAGGCAGAAGCATCCACCAGCCACACTTGAG...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAACCGCTTCACGGATTATaGCCTCAAGTGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKPLHGL*PQVWLV
Trigger: CACCAGCCACACTTGAGGCCATAATCCGTGAAGCGG...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGAGGTGTCTGGGAATGCTaGTTAGAGGCTACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGGVWEC*LEATRE
Trigger: CTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACC...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAGGTGTCTGGGAATGCTaGTTAGAGGCTACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKGVWEC*LEATRE
Trigger: CTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACC...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCATTTCCTCCTCCTGGGTaGAACAGTCAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPFPPPG*NSQGKG
Trigger: TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAA...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp AGTTCAGTTTCACTCTCGTCTGGGCCTCTAGCTCATTCAGCCTCTGGATTCGGGCTGAGAGTCTCAGGCTaGCTCTACTGCTACCGCCTC +
Preference number: 4 (lower is better)
Translates to: SSVSLSSGPLAHSASGFGLRVSG*LYCYRL
Trigger: GAGGCGGTAGCAGTAGAGTCAGCCTGAGACTCTCAG...CCCGAATCCAGAGGCTGAATGAGCTAGAGGCCCAGACGAGAGTGAAACTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR TCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCGTGGCCGTCGTGCTCTaGGAGTCTCAGGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIVAVVL*ESQADS
Trigger: AGAGTCAGCCTGAGACTCTCAGAGCACGACGGCCAC...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCCCACCACAATTTTGCTaGGACTGTAGAGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVPPQFC*DCRGPR
Trigger: TCTTGGACCTCTACAGTCTCAGCAAAATTGTGGTGG...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCCAGGGTTCTGGGCTGTaGCTCAGCTCCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIQGSGL*LSSSLL
Trigger: GAGCAAGGAGGAGCTGAGTCACAGCCCAGAACCCTG...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCCTCGCTCAGCCTCTGTaGTACCCTTCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQILAQPL*YPSPAG
Trigger: CCCTGCTGGAGAAGGGTATCACAGAGGCTGAGCGAG...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAGTTCCAGAACACCCTTaGCATCCCCAATCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKVPEHP*HPQSGA
Trigger: TGCACCAGATTGGGGATGTCAAGGGTGTTCTGGAAC...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAACCCAAGAAGCAGGCTTaGTGGTCAGAAAGAGGATCC +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKPKKQA*WSERGS
Trigger: GGATCCTCTTTCTGACCATCAAGCCTGCTTCTTGGG...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCTCTTTTATTACAACATaGACCCAGGAGGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPASFITT*TQEEER
Trigger: CCTTTCCTCCTCCTGGGTTCATGTTGTAATAAAAGA...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGAGGCGGATCTTGCAAATaGCCGATTTCTCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGGGSCK*PISLRW
Trigger: CCATCGCAGAGAAATCGGGCATTTGCAAGATCCGCC...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGGACTTGAGGGAAAGTGGACGTGTGTTACACTaGACAAGGTTGGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VGVWVRGPEPICLDLRESGRVLH*TRLAPD
Trigger: GTCTGGAGCCAACCTTGTGCAGTGTAACACACGTCC...ACTTTCCCTCAAGTCCAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCATTGAACTTGGAAGGCTaGACAGACTGTCGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPLNLEG*TDCRRG
Trigger: CCCCCTACGACAGTCTGTGCAGCCTTCCAAGTTCAA...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGCGCACAGGCAGTCTCTaGAGGGCTACCAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGRTGSL*RATSSA
Trigger: GGCACTGCTGGTAGCCCTGCAGAGACTGCCTGTGCG...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCACTCCCGTGACGCTCTaGCTTCTCCAGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPTPVTL*LLQLQK
Trigger: CTTCTGGAGCTGGAGAAGGCAGAGCGTCACGGGAGT...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAGCCCATCCATCTATCTaGCTCAGGTGTCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKAHPSI*LRCLGM
Trigger: CATTCCCAGACACCTGAGGCAGATAGATGGATGGGC...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGAAGGCTTCCAGTTTCACTCTCGTCTaGGCCTCTAGCTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: VVHFHSKGWLPVPVWKASSFTLV*ASSSFS
Trigger: GCTGAATGAGCTAGAGGCCCAGACGAGAGTGAAACT...GGAAGCCTTCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR CCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCTCCTCATTATCAAATaGACGTGTGTTACACTGCAC +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPALLIIK*TCVTLH
Trigger: GTGCAGTGTAACACACGTCCATTTGATAATGAGGAG...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375401.8
CDS-3UTR CCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGACAATGTCTTCCTCTGTaGGTTCCGGATCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGQCLPL*VPDQAA
Trigger: TGCAGCCTGATCCGGAACCCACAGAGGAAGACATTG...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAATCCTCCGTAGCCTCATaGTCATCTTGGTGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKSSVAS*SSWCRV
Trigger: AACCCTGCACCAAGATGACCATGAGGCTACGGAGGA...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGAAACTGGGCATTGCTGTaGTTCCTCCGTAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGNWALL*FLRSLM
Trigger: CATGAGGCTACGGAGGAACCACAGCAATGCCCAGTT...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAAACTGGGCATTGCTGTaGTTCCTCCGTAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKNWALL*FLRSLM
Trigger: CATGAGGCTACGGAGGAACCACAGCAATGCCCAGTT...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCAAAGCCAAAGGCTTCTaGGGGCCGCTTACACTCCGC +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPKAKGF*GPLTLR
Trigger: GCGGAGTGTAAGCGGCCCCCAGAAGCCTTTGGCTTT...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGATGCAGGAGGTCAGGCTaGCTATCAAATAGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGCRRSG*LSNSSG
Trigger: ACCTGAACTATTTGATAGCCAGCCTGACCTCCTGCA...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCTGCAGGAGGTCAGGCTaGCTATCAAATAGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVCRRSG*LSNSSG
Trigger: ACCTGAACTATTTGATAGCCAGCCTGACCTCCTGCA...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCTGGCGCTCATCATCTaGGAGCAGCTCGAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPLALII*EQLESL
Trigger: GAGGCTTTCGAGCTGCTCCCAGATGATGAGCGCCAG...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTCCGCTTCACGGATTATaGCCTCAAGTGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GKWLGVRVGGGSECLAQGPLHGL*PQVWLV
Trigger: CACCAGCCACACTTGAGGCCATAATCCGTGAAGCGG...ACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGATTCTCCAGTAAGCCCTaGACCTTAGGCATATCCTTG +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGFSSKP*TLGISL
Trigger: CAAGGATATGCCTAAGGTCCAGGGCTTACTGGAGAA...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCCCATTCTGGTTCTCCTaGGTGCTGGGGCTGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIPFWFS*VLGLPV
Trigger: CACTGGCAGCCCCAGCACCCAGGAGAACCAGAATGG...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGGACTTGAGGGAAAGTTCTGCCTCAGGTGTCTaGGAATGCTGGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: VGVWVRGPEPICLDLRESSASGV*ECWLEA
Trigger: AGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGA...ACTTTCCCTCAAGTCCAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp AGGATAAACTGGAGGGCATCAACTGGGGGAGGTTGTAGTGTAGGAGTTTGGGTGGGCCAGGACCAGAACTaGGGAGAGAAGGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: RINWRASTGGGCSVGVWVGQDQN*GEKGGE
Trigger: CTCTCCTCCCTTCTCTCCCCAGTTCTGGTCCTGGCC...CACCCAAACTCCTACACTACAACCTCCCCCAGTTGATGCCCTCCAGTTTATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452825.7
3UTR CAA 72 bp CCCGAGCCCATCTGTTTGGACTTGAGGGAAAGTGGCTaGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTG +
Preference number: 4 (lower is better)
Translates to: PEPICLDLRESG*GLESGEDQNVL
Trigger: CAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCCCTCAAGTCCAAACAGATGGGCTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCTCTTGTCTTTGGCCATaGGGCCCAGGCCCATCATCT +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPSCLWP*GPGPSS
Trigger: AGATGATGGGCCTGGGCCTCATGGCCAAAGACAAGA...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCGGTCTTAGGCGATGTTaGCTCCACCTTCACATCCCC +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPGLRRC*LHLHIP
Trigger: GGGGATGTGAAGGTGGAGTCAACATCGCCTAAGACC...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCGCCGTTTACTGTCACTaGCAGGGAAACCGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPAVYCH*QGNRCQ
Trigger: TTGGCAGCGGTTTCCCTGTCAGTGACAGTAAACGGC...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCCAGAGATATCTGCATTaGTGTGGCACAGTACAGACT +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVQRYLH*CGTVQT
Trigger: AGTCTGTACTGTGCCACATCAATGCAGATATCTCTG...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACAGAGATATCTGCATTaGTGTGGCACAGTACAGACT +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGQRYLH*CGTVQT
Trigger: AGTCTGTACTGTGCCACATCAATGCAGATATCTCTG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCATGTTCTGCTGCAAGTaGGGGCACCCCATACCAGGT +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPMFCCK*GHPIPG
Trigger: ACCTGGTATGGGGTGCCCTCACTTGCAGCAGAACAT...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAACAGCAGTGCAAAAGTTaGCAGCCTCGGCAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKQQCKS*QPRQSC
Trigger: ACAACTTTGCCGAGGCTGTCAACTTTTGCACTGCTG...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGCTCGCTCAGCCTCTGTaGTACCCTTCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGLAQPL*YPSPAG
Trigger: CCCTGCTGGAGAAGGGTATCACAGAGGCTGAGCGAG...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGAAATGCCCGATTTCTCTaGGATGGGCCTGATTTTCGC +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGNARFL*DGPDFR
Trigger: GCGAAAATCAGGCCCATCGCAGAGAAATCGGGCATT...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCCATAGGGATAAACAATaGGTTCGTAGTGGGAGCGTA +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVHRDKQ*VRSGSV
Trigger: TACGCTCCCACTACGAACGCATTGTTTATCCCTATG...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGATATTCCCGGGTAGCCTaGTCAAAGCCAAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGYSRVA*SKPKAS
Trigger: AGAAGCCTTTGGCTTTGAGCAGGCTACCCGGGAATA...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAATCTTCGGGGGTTAGGTaGCGTTTACTGTCACTGACA +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKSSGVR*RLLSLT
Trigger: TGTCAGTGACAGTAAACGGCACCTAACCCCCGAAGA...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCCGATACCGCAGGTACTaGCGGCTACTGGAGCACTTG +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIRYRRY*RLLEHL
Trigger: CAAGTGCTCCAGTAGCCGGCAGTACCTGCGGTATCG...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCACGAACCTTCAGCTTATaGAGCATGGCAGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPRTFSL*SMAGSS
Trigger: TGAGCTTCCTGCCATGCTGCATAAGCTGAAGGTTCG...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAACAGGGCTACCAGCAGTaGCAGGATGGTCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKQGYQQ*QDGLQA
Trigger: CGCCTGGAGACCATCCTGGCACTGCTGGTAGCCCTG...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp AGGATAAACTGGAGGGCATCAACTGGGGGAGGTTGTAGTGTAGGAGTTTGGGTGGTCAGAAGCAGGGGCTaGAGGGTAGTTAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RINWRASTGGGCSVGVWVVRSRG*RVVRRL
Trigger: GAGCCTCCTAACTACCCTGCAGCCCCTGCTTCTGAC...CACCCAAACTCCTACACTACAACCTCCCCCAGTTGATGCCCTCCAGTTTATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGTCAGGTGTCTGGGAATaGTGGTTAGAGGCTACCAGG +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQSGVWE*WLEATR
Trigger: CCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGA...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGCCCATCCATCTATCTaGCTCAGGTGTCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQAHPSI*LRCLGM
Trigger: CATTCCCAGACACCTGAGGCAGATAGATGGATGGGC...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTTCTTCCAAACTGTGTaGTTGCCTCCCCACTACCGC +
Preference number: 4 (lower is better)
Translates to: GKWLGVRVGGGSECLAQGFFQTV*LPPHYR
Trigger: GCGGTAGTGGGGAGGCAACCACACAGTTTGGAAGAA...ACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAAGTTTCACTCTCGTCTaGGCCTCTAGCTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKSFTLV*ASSSFS
Trigger: GCTGAATGAGCTAGAGGCCCAGACGAGAGTGAAACT...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGAAGGCTTCCGCCAATATTTTTGCCTaGTGGATAGTTGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VVHFHSKGWLPVPVWKASANIFA*WIVEAL
Trigger: CAGCGCCTCAACTATCCACCAGGCAAAAATATTGGC...GGAAGCCTTCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR CCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGTCCTCCGTAGCCTCATaGTCATCTTGGTGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQSSVAS*SSWCRV
Trigger: AACCCTGCACCAAGATGACCATGAGGCTACGGAGGA...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCCGCCATGACACACTTTaGGCACCGCCAGACACCCTT +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIRHDTL*APPDTL
Trigger: AAGGGTGTCTGGCGGTGCCCAAAGTGTGTCATGGCG...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCCCCAATCTGGTGCATaGCGCAAGGCAGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPPQSGA*RKAGCS
Trigger: TGAACAACCTGCCTTGCGCCATGCACCAGATTGGGG...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGTCCTGCAGCTCGGCCTaGGCTTTATCCACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGSCSSA*ALSTAG
Trigger: CCCTGCTGTGGATAAAGCCCAGGCCGAGCTGCAGGA...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAGTGGATGCTTCTGCCTaGCCTCCAGGCAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKVDASA*PPGRGG
Trigger: CCCACCTCTGCCTGGAGGCCAGGCAGAAGCATCCAC...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGCTCAAGTGTGGCTGGTaGATGCTTCTGCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLLKCGW*MLLPGL
Trigger: GAGGCCAGGCAGAAGCATCCACCAGCCACACTTGAG...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp AGGATAAACTGGAGGGCATCAACTGGGGGAGGTTGTAGTGTAGGAGTTTGGGTGCACTGGCCTTGTCTCTaGAATGGTGATGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RINWRASTGGGCSVGVWVHWPCL*NGDGPA
Trigger: GGCTGGGCCATCACCATTCCAGAGACAAGGCCAGTG...CACCCAAACTCCTACACTACAACCTCCCCCAGTTGATGCCCTCCAGTTTATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCGGGGTTAGTGTAGCATaGCCTGGCCAGGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIGVSVA*PGQDQN
Trigger: GTTCTGGTCCTGGCCAGGCCATGCTACACTAACCCC...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCTTTCCTCCTCCTGGGTaGAACAGTCAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPFPPPG*NSQGKG
Trigger: TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAA...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCTCCTCATTATCAAATaGACGTGTGTTACACACAAG +
Preference number: 4 (lower is better)
Translates to: VWECWLEATREGRLQGPALLIIK*TCVTHK
Trigger: CTTGTGTGTAACACACGTCCATTTGATAATGAGGAG...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404049.7
CDS-3UTR CCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCGGACTTGAGGGAAAGTaGCTTGGGGTTAGAGTCGGG +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPGLEGK*LGVRVG
Trigger: CCCGACTCTAACCCCAAGCCACTTTCCCTCAAGTCC...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCTCTCTGCGATGGGCCTaGTTTTCGCGATGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPSLRWA*FSRCSQ
Trigger: TTGGCTACATCGCGAAAATCAGGCCCATCGCAGAGA...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp AGTTCAGTTTCACTCTCGTCTGGGCCTCTAGCTCATTCAGCCTCTGGATTCGGGTCTCTGCGATGGGCCTaGTTTTCGCGATGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: SSVSLSSGPLAHSASGFGSLRWA*FSRCSQ
Trigger: TTGGCTACATCGCGAAAATCAGGCCCATCGCAGAGA...CCCGAATCCAGAGGCTGAATGAGCTAGAGGCCCAGACGAGAGTGAAACTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR TCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGGCCGGCCATAGCTGTTaGACTTGGAAGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGAGHSC*TWKAAQ
Trigger: CTGTGCAGCCTTCCAAGTTCAACAGCTATGGCCGGC...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCTCTTGTCTTTGGCCATaGGGCCCAGGCCCATCATCT +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQISCLWP*GPGPSS
Trigger: AGATGATGGGCCTGGGCCTCATGGCCAAAGACAAGA...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCGGTCTTAGGCGATGTTaGCTCCACCTTCACATCCCC +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIGLRRC*LHLHIP
Trigger: GGGGATGTGAAGGTGGAGTCAACATCGCCTAAGACC...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCGCCGTTTACTGTCACTaGCAGGGAAACCGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIAVYCH*QGNRCQ
Trigger: TTGGCAGCGGTTTCCCTGTCAGTGACAGTAAACGGC...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGTCTGTTCCCCCTCCTTaGAGGCCACGATCACAGAGC +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGSVPPP*RPRSQS
Trigger: GCTCTGTGATCGTGGCCTTCAAGGAGGGGGAACAGA...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAATGTCACAACTGTTGCTaGGGCGGCTGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKCHNCC*GGCCGQ
Trigger: CTGCCCACAGCAGCCGCCTCAGCAACAGTTGTGACA...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCCAGGAGCTGAGGTCTaGACAATACCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPPGAEV*TIPWSQ
Trigger: CTGACTCCAAGGTATTGTTCAGACCTCAGCTCCTGG...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAAGTACCACCCCGGACTaGGAGAAAATAGTTCATTGC +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKSTTPD*EKIVHC
Trigger: GCAATGAACTATTTTCTCTCAGTCCGGGGTGGTACT...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp AGTTCAGTTTCACTCTCGTCTGGGCCTCTAGCTCATTCAGCCTCTGGATTCGGGGGCGGATCTTGCAAATaGCCGATTTCTCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: SSVSLSSGPLAHSASGFGGGSCK*PISLRW
Trigger: CCATCGCAGAGAAATCGGGCATTTGCAAGATCCGCC...CCCGAATCCAGAGGCTGAATGAGCTAGAGGCCCAGACGAGAGTGAAACTGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR GCA 90 bp GTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGAAGGCTTCCCATAGGGATAAACAATaGGTTCGTAGTGGGAGCGTA +
Preference number: 4 (lower is better)
Translates to: VVHFHSKGWLPVPVWKASHRDKQ*VRSGSV
Trigger: TACGCTCCCACTACGAACGCATTGTTTATCCCTATG...GGAAGCCTTCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR GCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGATCTCGCCAAAGCTCTaGAGAGTGTATTCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQISPKL*RVYSRV
Trigger: TACCCGGGAATACACTCTGCAGAGCTTTGGCGAGAT...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGGTCAGAAGCAGGGGCTaGAGGGTAGTTAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGVRSRG*RVVRRL
Trigger: GAGCCTCCTAACTACCCTGCAGCCCCTGCTTCTGAC...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGAGAGTCCCCCAGTTTaGATATACACTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQESPPV*IYTGLV
Trigger: GACAAGGCCAGTGTATATGCAAACTGGGGGACTCTC...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp GGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTGAGAGTCCCCCAGTTTaGATATACACTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GKWLGVRVGGGSECLAQGESPPV*IYTGLV
Trigger: GACAAGGCCAGTGTATATGCAAACTGGGGGACTCTC...ACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGCAGAGATCATTGATGTaGGAAAGGCAGACAAGGCCG +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQQRSLM*ERQTRP
Trigger: CGGCCTTGTCTGCCTTTCCCACATCAATGATCTCTG...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGCCCAGCGTTCAGCAATaGTCAGCAGTTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLPSVQQ*SAVPAA
Trigger: AGCTGCAGGAACTGCTGACCATTGCTGAACGCTGGG...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAAGCTCTTCCTCCTCCTaGACCTCCTCAGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKSSSSS*TSSASG
Trigger: GCCAGAGGCTGAGGAGGTCCAGGAGGAGGAAGAGCT...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCAGTTTGCATATACACTaGCCTTGTCTCTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVSLHIH*PCLWNG
Trigger: ACCATTCCAGAGACAAGGCCAGTGTATATGCAAACT...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAGTTTGCATATACACTaGCCTTGTCTCTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGSLHIH*PCLWNG
Trigger: ACCATTCCAGAGACAAGGCCAGTGTATATGCAAACT...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAGGCCAGGACCAGAACTaGGGAGAGAAGGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKGQDQN*GEKGGE
Trigger: CTCTCCTCCCTTCTCTCCCCAGTTCTGGTCCTGGCC...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGTTTCCTCCTCCTGGGTaGAACAGTCAGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLFPPPG*NSQGKG
Trigger: TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAA...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp GGGGGAGGTTGTAGTGTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGCTAAATAGGCTGGTATaGGTTTCTATTTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GGGCSVGVWVRGPEPICLLNRLV*VSIWKG
Trigger: CCCCTTCCAAATAGAAACCCATACCAGCCTATTTAG...CAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTACACTACAACCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGCCACCACAATTTTGCTaGGACTGTAGAGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQPPQFC*DCRGPR
Trigger: TCTTGGACCTCTACAGTCTCAGCAAAATTGTGGTGG...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp AACCTGAAGTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGACCACCACAATTTTGCTaGGACTGTAGAGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: NLKLSTSTAKGGCQSQSGPPQFC*DCRGPR
Trigger: TCTTGGACCTCTACAGTCTCAGCAAAATTGTGGTGG...TCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAACTTCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR TCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGACATCCGGCAGACATATaGCTCAATAAACTGGGCATT +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGHPADI*LNKLGI
Trigger: AATGCCCAGTTTATTGAGTCATATGTCTGCCGGATG...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGATGTTCTGCTGCAAGTaGGGGCACCCCATACCAGGT +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGMFCCK*GHPIPG
Trigger: ACCTGGTATGGGGTGCCCTCACTTGCAGCAGAACAT...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCCCCAAGAAGCAGGCTTaGTGGTCAGAAAGAGGATCC +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIPKKQA*WSERGS
Trigger: GGATCCTCTTTCTGACCATCAAGCCTGCTTCTTGGG...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAATCCAAACTGTGTGGTTaGCTCCCCACTACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKSKLCG*LPTTAA
Trigger: GGCTGCGGTAGTGGGGAGGCAACCACACAGTTTGGA...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp AGTTCAGTTTCACTCTCGTCTGGGCCTCTAGCTCATTCAGCCTCTGGATTCGGGAATGCCCGATTTCTCTaGGATGGGCCTGATTTTCGC +
Preference number: 4 (lower is better)
Translates to: SSVSLSSGPLAHSASGFGNARFL*DGPDFR
Trigger: GCGAAAATCAGGCCCATCGCAGAGAAATCGGGCATT...CCCGAATCCAGAGGCTGAATGAGCTAGAGGCCCAGACGAGAGTGAAACTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR GCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGACATAGGGATAAACAATaGGTTCGTAGTGGGAGCGTA +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGHRDKQ*VRSGSV
Trigger: TACGCTCCCACTACGAACGCATTGTTTATCCCTATG...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCTTGAACTTGGAAGGCTaGACAGACTGTCGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQILNLEG*TDCRRG
Trigger: CCCCCTACGACAGTCTGTGCAGCCTTCCAAGTTCAA...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGTTGAACTTGGAAGGCTaGACAGACTGTCGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLLNLEG*TDCRRG
Trigger: CCCCCTACGACAGTCTGTGCAGCCTTCCAAGTTCAA...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCTATTCCCGGGTAGCCTaGTCAAAGCCAAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPYSRVA*SKPKAS
Trigger: AGAAGCCTTTGGCTTTGAGCAGGCTACCCGGGAATA...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGATGGTCAGCAGTTCCTaGAGCTCGGCCTGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGMVSSS*SSAWAL
Trigger: TAAAGCCCAGGCCGAGCTGCAGGAACTGCTGACCAT...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGAAGGATCAGAATGTCTTaGCCAAGGTTAAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGRIRMS*PRLRSW
Trigger: CCAGCTTCTTAACCTTGGGCAAGACATTCTGATCCT...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAAGGGATCGGGAGGCTTaGACCGCCCTTAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKRDREA*TALKDS
Trigger: TGAGTCCTTAAGGGCGGTCCAAGCCTCCCGATCCCT...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGCAATGTCTTCCTCTGTaGGTTCCGGATCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLQCLPL*VPDQAA
Trigger: TGCAGCCTGATCCGGAACCCACAGAGGAAGACATTG...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCAACTGGGCATTGCTGTaGTTCCTCCGTAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQINWALL*FLRSLM
Trigger: CATGAGGCTACGGAGGAACCACAGCAATGCCCAGTT...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGGTTTGTGCGGACAACTaGCACACCATGGGACATGAG +
Preference number: 4 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLVCADN*HTMGHE
Trigger: CTCATGTCCCATGGTGTGCCAGTTGTCCGCACAAAC...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGCCCCAATCTGGTGCATaGCGCAAGGCAGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGPQSGA*RKAGCS
Trigger: TGAACAACCTGCCTTGCGCCATGCACCAGATTGGGG...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAGGTTCCAAGCCATTCTaGTTCTCCTGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKGSKPF*FSWVLG
Trigger: CCCCAGCACCCAGGAGAACCAGAATGGCTTGGAACC...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAGGGGTTAGTGTAGCATaGCCTGGCCAGGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKGVSVA*PGQDQN
Trigger: GTTCTGGTCCTGGCCAGGCCATGCTACACTAACCCC...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCGAAGTTTCCTCCTCCTaGGTGGAACAGTCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIEVSSS*VEQSGE
Trigger: TTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTC...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp AGGATAAACTGGAGGGCATCAACTGGGGGAGGTTGTAGTGTAGGAGTTTGGGTGGAAGTTTCCTCCTCCTaGGTGGAACAGTCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RINWRASTGGGCSVGVWVEVSSS*VEQSGE
Trigger: TTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTC...CACCCAAACTCCTACACTACAACCTCCCCCAGTTGATGCCCTCCAGTTTATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGTCTCTGCGATGGGCCTaGTTTTCGCGATGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGSLRWA*FSRCSQ
Trigger: TTGGCTACATCGCGAAAATCAGGCCCATCGCAGAGA...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAATGTTCTGCTGCAAGTaGGGGCACCCCATACCAGGT +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKMFCCK*GHPIPG
Trigger: ACCTGGTATGGGGTGCCCTCACTTGCAGCAGAACAT...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCCAGCAGTGCAAAAGTTaGCAGCCTCGGCAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIQQCKS*QPRQSC
Trigger: ACAACTTTGCCGAGGCTGTCAACTTTTGCACTGCTG...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR TCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAATCTTTTATTACAACATaGACCCAGGAGGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKSFITT*TQEEER
Trigger: CCTTTCCTCCTCCTGGGTTCATGTTGTAATAAAAGA...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACTGTCGTAGGGGGATaGTGTGGGGTTTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQITVVGG*CGVCIP
Trigger: AGGAATACAAACCCCACAGCATCCCCCTACGACAGT...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCATCTCGCCAAAGCTCTaGAGAGTGTATTCCCGGGTA +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIISPKL*RVYSRV
Trigger: TACCCGGGAATACACTCTGCAGAGCTTTGGCGAGAT...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGCATGCCAGAGATATCTaGATTGATGTGGCACAGTAC +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQHARDI*IDVAQY
Trigger: GTACTGTGCCACATCAATGCAGATATCTCTGGCATG...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp AGGATAAACTGGAGGGCATCAACTGGGGGAGGTTGTAGTGTAGGAGTTTGGGTGATGAACATCTCCTTATaGACAGCTGCCGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RINWRASTGGGCSVGVWVMNISL*TAAARF
Trigger: GAACCTGGCGGCAGCTGTGCATAAGGAGATGTTCAT...CACCCAAACTCCTACACTACAACCTCCCCCAGTTGATGCCCTCCAGTTTATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGCGAACCTTCAGCTTATaGAGCATGGCAGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLRTFSL*SMAGSS
Trigger: TGAGCTTCCTGCCATGCTGCATAAGCTGAAGGTTCG...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAGAGCCTCGTATACGTTaGGTCACACCAAGCCCTAGG +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKEPRIR*VTPSPR
Trigger: CCTAGGGCTTGGTGTGACGCAACGTATACGAGGCTC...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAACTCCTCATTATCAAATaGACGTGTGTTACACTGCAC +
Preference number: 4 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKLLIIK*TCVTLH
Trigger: GTGCAGTGTAACACACGTCCATTTGATAATGAGGAG...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000452825.7
CDS-3UTR CCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGTCCTCCGTAGCCTCATaGTCATCTTGGTGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGSSVAS*SSWCRV
Trigger: AACCCTGCACCAAGATGACCATGAGGCTACGGAGGA...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGGACTTGAGGGAAAGTTATGACTCAATAAACTaGGCATTGCTGTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: VGVWVRGPEPICLDLRESYDSIN*ALLWFL
Trigger: GAGGAACCACAGCAATGCCCAGTTTATTGAGTCATA...ACTTTCCCTCAAGTCCAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAACCCCAATCTGGTGCATaGCGCAAGGCAGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKPQSGA*RKAGCS
Trigger: TGAACAACCTGCCTTGCGCCATGCACCAGATTGGGG...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAACCGCTTCACGGATTATaGCCTCAAGTGTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKPLHGL*PQVWLV
Trigger: CACCAGCCACACTTGAGGCCATAATCCGTGAAGCGG...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCTTCTCCAGTAAGCCCTaGACCTTAGGCATATCCTTG +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPFSSKP*TLGISL
Trigger: CAAGGATATGCCTAAGGTCCAGGGCTTACTGGAGAA...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGTCTGCCTCAGGTGTCTaGGAATGCTGGTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGSASGV*ECWLEA
Trigger: AGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGA...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAAGTTTGCATATACACTaGCCTTGTCTCTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPSLHIH*PCLWNG
Trigger: ACCATTCCAGAGACAAGGCCAGTGTATATGCAAACT...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR TCA 90 bp GGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTCTTTTATTACAACATaGACCCAGGAGGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GKWLGVRVGGGSECLAQGSFITT*TQEEER
Trigger: CCTTTCCTCCTCCTGGGTTCATGTTGTAATAAAAGA...ACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCATGCCAGAGATATCTaGATTGATGTGGCACAGTAC +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPHARDI*IDVAQY
Trigger: GTACTGTGCCACATCAATGCAGATATCTCTGGCATG...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGATGAACATCTCCTTATaGACAGCTGCCGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGMNISL*TAAARF
Trigger: GAACCTGGCGGCAGCTGTGCATAAGGAGATGTTCAT...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAATCAGGTGTCTGGGAATaGTGGTTAGAGGCTACCAGG +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKSGVWE*WLEATR
Trigger: CCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGA...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGGAGAGTCCCCCAGTTTaGATATACACTGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGESPPV*IYTGLV
Trigger: GACAAGGCCAGTGTATATGCAAACTGGGGGACTCTC...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAATTCTTCCAAACTGTGTaGTTGCCTCCCCACTACCGC +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKFFQTV*LPPHYR
Trigger: GCGGTAGTGGGGAGGCAACCACACAGTTTGGAAGAA...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCGCCAATATTTTTGCCTaGTGGATAGTTGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIANIFA*WIVEAL
Trigger: CAGCGCCTCAACTATCCACCAGGCAAAAATATTGGC...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGTATGACTCAATAAACTaGGCATTGCTGTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQYDSIN*ALLWFL
Trigger: GAGGAACCACAGCAATGCCCAGTTTATTGAGTCATA...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR GCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAAATGCCCGATTTCTCTaGGATGGGCCTGATTTTCGC +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKNARFL*DGPDFR
Trigger: GCGAAAATCAGGCCCATCGCAGAGAAATCGGGCATT...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGGCCAATATTTTTGCCTaGTGGATAGTTGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGANIFA*WIVEAL
Trigger: CAGCGCCTCAACTATCCACCAGGCAAAAATATTGGC...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAACAGAGATCATTGATGTaGGAAAGGCAGACAAGGCCG +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKQRSLM*ERQTRP
Trigger: CGGCCTTGTCTGCCTTTCCCACATCAATGATCTCTG...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGTTCTCCAGTAAGCCCTaGACCTTAGGCATATCCTTG +
Preference number: 4 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGFSSKP*TLGISL
Trigger: CAAGGATATGCCTAAGGTCCAGGGCTTACTGGAGAA...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR GCA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGGGCGGTAGTGCTCAATaGACTGGCGCCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGGGSAQ*TGAQQA
Trigger: TGCCTGCTGGGCGCCAGTGCATTGAGCACTACCGCC...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGCAAGGGGGCCCGGGTTaGCTCAGGCAGTTCCAACAC +
Preference number: 4 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGQGGPG*LRQFQH
Trigger: GTGTTGGAACTGCCTGAGGCAACCCGGGCCCCCTTG...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAACATCCGGCAGACATATaGCTCAATAAACTGGGCATT +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKHPADI*LNKLGI
Trigger: AATGCCCAGTTTATTGAGTCATATGTCTGCCGGATG...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGTCCTGCAGCTCGGCCTaGGCTTTATCCACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGSCSSA*ALSTAG
Trigger: CCCTGCTGTGGATAAAGCCCAGGCCGAGCTGCAGGA...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGCCAAGGTTAAGAAGCTaGTGGAACTTGATTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLPRLRS*WNLISE
Trigger: TTCTGAAATCAAGTTCCACCAGCTTCTTAACCTTGG...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGTGTAGTGTAGGAGTTTaGGTGAGGGGGCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGCSVGV*VRGPEP
Trigger: GGGCTCGGGCCCCCTCACCCAAACTCCTACACTACA...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR TCA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGTCTGTTCCCCCTCCTTaGAGGCCACGATCACAGAGC +
Preference number: 4 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGSVPPP*RPRSQS
Trigger: GCTCTGTGATCGTGGCCTTCAAGGAGGGGGAACAGA...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGCCAGGCCCATCATCTTaGGGCCTGCCCCATAGATCT +
Preference number: 4 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGPGPSS*GLPHRS
Trigger: AGATCTATGGGGCAGGCCCCAAGATGATGGGCCTGG...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAATATGACTCAATAAACTaGGCATTGCTGTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKYDSIN*ALLWFL
Trigger: GAGGAACCACAGCAATGCCCAGTTTATTGAGTCATA...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CCA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCGAATTATGCAGTAGATaGGTTAGACAGGAAAACATT +
Preference number: 4 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPELCSR*VRQENI
Trigger: AATGTTTTCCTGTCTAACCCATCTACTGCATAATTC...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCTTTTCGAATGATGGCTaGACAACTCTGAATATACTA +
Preference number: 4 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIFSNDG*TTLNIL
Trigger: TAGTATATTCAGAGTTGTGCAGCCATCATTCGAAAA...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGGGCAATAAAGCATCATaGAAGGTTTTAAGCAGTATA +
Preference number: 4 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLGNKAS*KVLSSI
Trigger: TATACTGCTTAAAACCTTCCATGATGCTTTATTGCC...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGCAGAGATCATTGATGTaGGAAAGGCAGACAAGGCCG +
Preference number: 4 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGQRSLM*ERQTRP
Trigger: CGGCCTTGTCTGCCTTTCCCACATCAATGATCTCTG...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CCA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGGCCAATATTTTTGCCTaGTGGATAGTTGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGANIFA*WIVEAL
Trigger: CAGCGCCTCAACTATCCACCAGGCAAAAATATTGGC...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGCATGCCAGAGATATCTaGATTGATGTGGCACAGTAC +
Preference number: 4 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGHARDI*IDVAQY
Trigger: GTACTGTGCCACATCAATGCAGATATCTCTGGCATG...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR GCA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGAAAATCAGGGAATTATaGAGTAGATGGGTTAGACAG +
Preference number: 4 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGKIREL*SRWVRQ
Trigger: CTGTCTAACCCATCTACTGCATAATTCCCTGATTTT...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS TCA 90 bp CCGCCGCCCGCCGAGGGCCTAAGGGGGCGTGTGGCCGTCGTGCTCTaGGAGTCTCAGGCTGACTCTACTGCTACCGCCTCTTCGTCCCGC +
Preference number: 5 (lower is better)
Translates to: PPPAEGLRGRVAVVL*ESQADSTATASSSR
Trigger: GCGGGACGAAGAGGCGGTAGCAGTAGAGTCAGCCTGAGACTCTCAGAGCACGACGGCCACACGCCCCCTTAGGCCCTCGGCGGGCGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS TCA 90 bp GGGAGGCTTGGACCGCCCTTAAGGACTCATGGCGCCGCCGCTGTTTaGAGCCGAGGCAATGCTCGGAGGCTAGGCCCTAAGCGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GRLGPPLRTHGAAAV*SRGNARRLGPKRGS
Trigger: GCTGCCCCGCTTAGGGCCTAGCCTCCGAGCATTGCCTCGGCTTCAAACAGCGGCGGCGCCATGAGTCCTTAAGGGCGGTCCAAGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS CCA 90 bp GTCTGGGCCAGGGATCGGGAGGCTTGGACCGCCCTTAAGGACTCATaGCGCCGCCGCTGTTTGAAGCCGAGGCAATGCTCGGAGGCTAGG +
Preference number: 5 (lower is better)
Translates to: VWARDREAWTALKDS*RRRCLKPRQCSEAR
Trigger: CCTAGCCTCCGAGCATTGCCTCGGCTTCAAACAGCGGCGGCGCCATGAGTCCTTAAGGGCGGTCCAAGCCTCCCGATCCCTGGCCCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS-3UTR CAA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCAGCTCCGTACCCTCTTaGGCTCTAGCTCCTCTCGGG +
Preference number: 5 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPSSVPS*ALAPLG
Trigger: CCCGAGAGGAGCTAGAGCCAAAGAGGGTACGGAGCT...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAGCCGCCGCCGCCATCTaGGTTTGTCAGCGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGAAAAI*VCQRLP
Trigger: GGGGAGACGCTGACAAACCAAGATGGCGGCGGCGGC...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCTTCCAAACTGTGTGGTaGCCTCCCCACTACCGCAGC +
Preference number: 5 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPFQTVW*PPHYRS
Trigger: GCTGCGGTAGTGGGGAGGCAACCACACAGTTTGGAA...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCGGGGATGAGGTGGGATaGGGCCTCGGAGAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVGDEVG*GLGELR
Trigger: CCTCAGCTCTCCGAGGCCCAATCCCACCTCATCCCC...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS TCA 90 bp GGGCCTAAGGGGGCGTGTGGCCGTCGTGCTCTGAGAGTCTCAGGCTaGCTCTACTGCTACCGCCTCTTCGTCCCGCTCCGTTTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: GPKGACGRRALRVSG*LYCYRLFVPLRFFQ
Trigger: TTGGAAGAAACGGAGCGGGACGAAGAGGCGGTAGCAGTAGAGTCAGCCTGAGACTCTCAGAGCACGACGGCCACACGCCCCCTTAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS-3UTR CAA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACGCAGAGTCTTGTCTTaGGCCATGAGGCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGRRVLS*AMRPRP
Trigger: GGGCCTGGGCCTCATGGCCAAAGACAAGACTCTGCG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCTTCTTCCGCAGAGTCTaGTCTTTGGCCATGAGGCCC +
Preference number: 5 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPFFRRV*SLAMRP
Trigger: GGGCCTCATGGCCAAAGACAAGACTCTGCGGAAGAA...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGAGGGGATGAGGTGGGATaGGGCCTCGGAGAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGGDEVG*GLGELR
Trigger: CCTCAGCTCTCCGAGGCCCAATCCCACCTCATCCCC...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGACGCCGCCATCTTGGTTaGTCAGCGTCTCCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGRRHLG*SASPLP
Trigger: GGGGAGGGGAGACGCTGACAAACCAAGATGGCGGCG...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS GCA 90 bp GCTACCGCCTCTTCGTCCCGCTCCGTTTCTTCCAAACTGTGTGGTTaGCTCCCCACTACCGCAGCCTTCGCCACCACAGTTACCTCCCAA +
Preference number: 5 (lower is better)
Translates to: ATASSSRSVSSKLCG*LPTTAAFATTVTSQ
Trigger: TTGGGAGGTAACTGTGGTGGCGAAGGCTGCGGTAGTGGGGAGGCAACCACACAGTTTGGAAGAAACGGAGCGGGACGAAGAGGCGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS-3UTR CAA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCGGGGTAAACCTGAAGTaGTCCACTTCCACAGCAAAG +
Preference number: 5 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPGVNLK*STSTAK
Trigger: CTTTGCTGTGGAAGTGGACAACTTCAGGTTTACCCC...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS CCA 90 bp TACTGCTACCGCCTCTTCGTCCCGCTCCGTTTCTTCCAAACTGTGTaGTTGCCTCCCCACTACCGCAGCCTTCGCCACCACAGTTACCTC +
Preference number: 5 (lower is better)
Translates to: YCYRLFVPLRFFQTV*LPPHYRSLRHHSYL
Trigger: GAGGTAACTGTGGTGGCGAAGGCTGCGGTAGTGGGGAGGCAACCACACAGTTTGGAAGAAACGGAGCGGGACGAAGAGGCGGTAGCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS-3UTR CAA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGCACCGCCAGACACCCTaGGGGATCTCAGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQHRQTP*GISGRG
Trigger: TCCTCTGCCTGAGATCCCCAAGGGTGTCTGGCGGTG...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCACCTTAGGCATATCCTaGCCACTGCCCTCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVTLGIS*PLPSLR
Trigger: CCTCAGAGAGGGCAGTGGCAAGGATATGCCTAAGGT...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAAGCTCCGTACCCTCTTaGGCTCTAGCTCCTCTCGGG +
Preference number: 5 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPSSVPS*ALAPLG
Trigger: CCCGAGAGGAGCTAGAGCCAAAGAGGGTACGGAGCT...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGACCCATCTGTTTGGACTaGAGGGAAAGTGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGPICLD*RESGLG
Trigger: CCCCAAGCCACTTTCCCTCAAGTCCAAACAGATGGG...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCTGGCGCCGCCGCTGTTaGAAGCCGAGGCAATGCTCG +
Preference number: 5 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIWRRRC*KPRQCS
Trigger: CGAGCATTGCCTCGGCTTCAAACAGCGGCGGCGCCA...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCGCAGAGTCTTGTCTTaGGCCATGAGGCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPRRVLS*AMRPRP
Trigger: GGGCCTGGGCCTCATGGCCAAAGACAAGACTCTGCG...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGATGTTCCAGAACACCCTaGACATCCCCAATCTGGTGC +
Preference number: 5 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGCSRTP*TSPIWC
Trigger: GCACCAGATTGGGGATGTCAAGGGTGTTCTGGAACA...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGGGGGATGAGGTGGGATaGGGCCTCGGAGAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLGDEVG*GLGELR
Trigger: CCTCAGCTCTCCGAGGCCCAATCCCACCTCATCCCC...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAGGAGAGTCCCCCAGTTaGCATATACACTGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGGESPS*HIHWPC
Trigger: ACAAGGCCAGTGTATATGCAAACTGGGGGACTCTCC...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGGACTTGAGGGAAAGTCCCGAGCCCATCTGTTaGGACTTGAGGGAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: VGVWVRGPEPICLDLRESPEPIC*DLRESG
Trigger: GCCACTTTCCCTCAAGTCCAAACAGATGGGCTCGGG...ACTTTCCCTCAAGTCCAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp AACCTGAAGTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGATTCCAAACTGTGTGGTaGCCTCCCCACTACCGCAGC +
Preference number: 5 (lower is better)
Translates to: NLKLSTSTAKGGCQSQSGFQTVW*PPHYRS
Trigger: GCTGCGGTAGTGGGGAGGCAACCACACAGTTTGGAA...TCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAACTTCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR CAA 90 bp GGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTTCCAAACTGTGTGGTaGCCTCCCCACTACCGCAGC +
Preference number: 5 (lower is better)
Translates to: GKWLGVRVGGGSECLAQGFQTVW*PPHYRS
Trigger: GCTGCGGTAGTGGGGAGGCAACCACACAGTTTGGAA...ACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAGGGGTAAACCTGAAGTaGTCCACTTCCACAGCAAAG +
Preference number: 5 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGGVNLK*STSTAK
Trigger: CTTTGCTGTGGAAGTGGACAACTTCAGGTTTACCCC...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp CTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCCCTGGGGTTTGTATTCCTaGTCCTTCTCCTCATTATCA +
Preference number: 5 (lower is better)
Translates to: LGMLVRGYQGGKTPGAGPWGLYS*SFSSLS
Trigger: TGATAATGAGGAGAAGGACAAGGAATACAAACCCCA...GGGGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCCACCGCCAGACACCCTaGGGGATCTCAGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIHRQTP*GISGRG
Trigger: TCCTCTGCCTGAGATCCCCAAGGGTGTCTGGCGGTG...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGCACCGCCAGACACCCTaGGGGATCTCAGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLHRQTP*GISGRG
Trigger: TCCTCTGCCTGAGATCCCCAAGGGTGTCTGGCGGTG...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp AAGACTCCAGGGGCCGGCCCCCAGGAGCTGAGGTCTGAACAATACCTTGGAGTCTCAGCAGTGCAAAAGTaGACAGCCTCGGCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: KTPGAGPQELRSEQYLGVSAVQK*TASAKL
Trigger: CAACTTTGCCGAGGCTGTCAACTTTTGCACTGCTGA...GACTCCAAGGTATTGTTCAGACCTCAGCTCCTGGGGGCCGGCCCCTGGAGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCGTAGTGGTCACCATTTaGGATCTCATCAACATCAGC +
Preference number: 5 (lower is better)
Translates to: VWECWLEATREGRLQGPAVVVTI*DLINIS
Trigger: GCTGATGTTGATGAGATCCAAAATGGTGACCACTAC...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGAACCTTAGGCATATCCTaGCCACTGCCCTCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGTLGIS*PLPSLR
Trigger: CCTCAGAGAGGGCAGTGGCAAGGATATGCCTAAGGT...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS TCA 90 bp TTCCTCCGTAGCCTCATGGTCATCTTGGTGCAGGGTTCTGGGCTGTaGCTCAGCTCCTCCTTGCTCTCCAGGAAGGTCTTAGGCGATGTT +
Preference number: 5 (lower is better)
Translates to: FLRSLMVILVQGSGL*LSSSLLSRKVLGDV
Trigger: AACATCGCCTAAGACCTTCCTGGAGAGCAAGGAGGAGCTGAGTCACAGCCCAGAACCCTGCACCAAGATGACCATGAGGCTACGGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
ENST00000497995.1
CDS GCA 90 bp AAACCGGATCCTTCCGCGGGGTGTCCTTCCGAGCCTCGTATACGTTaGGTCACACCAAGCCCTAGGAAACCTTCATATAGTGGAGACCGA +
Preference number: 5 (lower is better)
Translates to: KPDPSAGCPSEPRIR*VTPSPRKPSYSGDR
Trigger: TCGGTCTCCACTATATGAAGGTTTCCTAGGGCTTGGTGTGACGCAACGTATACGAGGCTCGGAAGGACACCCCGCGGAAGGATCCGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GTTGTCCACTTCCACAGCAAAGGGTGGCTGCCAGTCCCAGTCTGGAAGGCTTCCGGGGTAAACCTGAAGTaGTCCACTTCCACAGCAAAG +
Preference number: 5 (lower is better)
Translates to: VVHFHSKGWLPVPVWKASGVNLK*STSTAK
Trigger: CTTTGCTGTGGAAGTGGACAACTTCAGGTTTACCCC...GGAAGCCTTCCAGACTGGGACTGGCAGCCACCCTTTGCTGTGGAAGTGGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429877.5
CDS-3UTR CAA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCTGGGGTTTGTATTCCTaGTCCTTCTCCTCATTATCA +
Preference number: 5 (lower is better)
Translates to: VWECWLEATREGRLQGPAWGLYS*SFSSLS
Trigger: TGATAATGAGGAGAAGGACAAGGAATACAAACCCCA...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGAGGCAAAGTTGTAGCCTaGGTTGAAGCCGCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGGKVVA*VEAAVV
Trigger: TACCACAGCGGCTTCAACCAAGGCTACAACTTTGCC...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAACGCAGAGTCTTGTCTTaGGCCATGAGGCCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKRRVLS*AMRPRP
Trigger: GGGCCTGGGCCTCATGGCCAAAGACAAGACTCTGCG...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAATCAATAAACTGGGCATaGCTGTGGTTCCTCCGTAGC +
Preference number: 5 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKSINWA*LWFLRS
Trigger: GCTACGGAGGAACCACAGCAATGCCCAGTTTATTGA...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGATCAATAAACTGGGCATaGCTGTGGTTCCTCCGTAGC +
Preference number: 5 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGSINWA*LWFLRS
Trigger: GCTACGGAGGAACCACAGCAATGCCCAGTTTATTGA...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGATCAGCAGTGCAAAAGTaGACAGCCTCGGCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGSAVQK*TASAKL
Trigger: CAACTTTGCCGAGGCTGTCAACTTTTGCACTGCTGA...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAACACGTAGTCTTGCACTaGATACACTGGCGCTCATCA +
Preference number: 5 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKHVVLH*IHWRSS
Trigger: TGATGAGCGCCAGTGTATCAAGTGCAAGACTACGTG...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GAGCACGGCTATGTGAAGTTTCCTCCTCCTGGGTGGAACAGTCAGGGGAAGGGACACGTAGTCTTGCACTaGATACACTGGCGCTCATCA +
Preference number: 5 (lower is better)
Translates to: EHGYVKFPPPGWNSQGKGHVVLH*IHWRSS
Trigger: TGATGAGCGCCAGTGTATCAAGTGCAAGACTACGTG...TCCCTTCCCCTGACTGTTCCACCCAGGAGGAGGAAACTTCACATAGCCGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAAAAAGGAAACACGTAGTCTaGCACTTGATACACTGGCGC +
Preference number: 5 (lower is better)
Translates to: GWNSQGKGEGEGGRKEGKRKHVV*HLIHWR
Trigger: GCGCCAGTGTATCAAGTGCAAGACTACGTGTTTCCT...TTTTCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp TGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAAGGAAACACGTAGTCTaGCACTTGATACACTGGCGC +
Preference number: 5 (lower is better)
Translates to: CLRCLGMLVRGYQGGKTPRKHVV*HLIHWR
Trigger: GCGCCAGTGTATCAAGTGCAAGACTACGTGTTTCCT...TGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGATGGCGCAAGGCAGGTaGTTCATCTGGTCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQMAQGR*FIWSRK
Trigger: CTTTCTGGACCAGATGAACAACCTGCCTTGCGCCAT...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGTGTTCCAGAACACCCTaGACATCCCCAATCTGGTGC +
Preference number: 5 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQCSRTP*TSPIWC
Trigger: GCACCAGATTGGGGATGTCAAGGGTGTTCTGGAACA...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp GTCTGGGAATGCTGGTTAGAGGCTACCAGGGAGGGAAGACTCCAGGGGCCGGCCGGTCTGAACAATACCTaGGAGTCAGAATACAAAAGT +
Preference number: 5 (lower is better)
Translates to: VWECWLEATREGRLQGPAGLNNT*ESEYKS
Trigger: ACTTTTGTATTCTGACTCCAAGGTATTGTTCAGACC...GGCCGGCCCCTGGAGTCTTCCCTCCCTGGTAGCCTCTAACCAGCATTCCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp GGAAAGTGGCTTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTAGGAAACACGTAGTCTaGCACTTGATACACTGGCGC +
Preference number: 5 (lower is better)
Translates to: GKWLGVRVGGGSECLAQGRKHVV*HLIHWR
Trigger: GCGCCAGTGTATCAAGTGCAAGACTACGTGTTTCCT...ACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAAGCCACTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGACCTTAGGCATATCCTaGCCACTGCCCTCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLTLGIS*PLPSLR
Trigger: CCTCAGAGAGGGCAGTGGCAAGGATATGCCTAAGGT...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp CCTGGGTGGAACAGTCAGGGGAAGGGAGAGGGAGAAGGGGGTAGGAAGGAAGGAGGTATGGGTTTCTATTaGGAAGGGGTTACTCAAAAG +
Preference number: 5 (lower is better)
Translates to: PGWNSQGKGEGEGGRKEGGMGFY*EGVTQK
Trigger: CTTTTGAGTAACCCCTTCCAAATAGAAACCCATACC...TCCTTCCTTCCTACCCCCTTCTCCCTCTCCCTTCCCCTGACTGTTCCACCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGTTGAGGGAAAGTGGCTaGGGGTTAGAGTCGGGGGAG +
Preference number: 5 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGLRESG*GLESGE
Trigger: CTCCCCCGACTCTAACCCCAAGCCACTTTCCCTCAA...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS CCA 90 bp GTCCAAGTAGTTCAGTTTCACTCTCGTCTGGGCCTGAAGAAGAAATaGCTCAAAGAGGCTGGCCACCCCCTCCCACTGACCACTATCTTT +
Preference number: 5 (lower is better)
Translates to: VQVVQFHSRLGLKKK*LKEAGHPLPLTTIF
Trigger: AAAGATAGTGGTCAGTGGGAGGGGGTGGCCAGCCTCTTTGAGCCATTTCTTCTTCAGGCCCAGACGAGAGTGAAACTGAACTACTTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495519.1
CDS-3UTR CAA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAATTCCAAACTGTGTGGTaGCCTCCCCACTACCGCAGC +
Preference number: 5 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKFQTVW*PPHYRS
Trigger: GCTGCGGTAGTGGGGAGGCAACCACACAGTTTGGAA...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCGGCAAAGTTGTAGCCTaGGTTGAAGCCGCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIGKVVA*VEAAVV
Trigger: TACCACAGCGGCTTCAACCAAGGCTACAACTTTGCC...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCACGTAGTCTTGCACTaGATACACTGGCGCTCATCA +
Preference number: 5 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPHVVLH*IHWRSS
Trigger: TGATGAGCGCCAGTGTATCAAGTGCAAGACTACGTG...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCATGGCGCAAGGCAGGTaGTTCATCTGGTCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQIMAQGR*FIWSRK
Trigger: CTTTCTGGACCAGATGAACAACCTGCCTTGCGCCAT...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GGGGGAGGTTGTAGTGTAGGAGTTTGGGTGAGGGGGCCCGAGCCCATCTGTTTGGGTCTGAACAATACCTaGGAGTCAGAATACAAAAGT +
Preference number: 5 (lower is better)
Translates to: GGGCSVGVWVRGPEPICLGLNNT*ESEYKS
Trigger: ACTTTTGTATTCTGACTCCAAGGTATTGTTCAGACC...CAAACAGATGGGCTCGGGCCCCCTCACCCAAACTCCTACACTACAACCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp GAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCAATCCCTTTGGGAGCTaGAGGAGGATAAACTGGAGG +
Preference number: 5 (lower is better)
Translates to: EDKHQKLSSDHREPCSAPNPFGS*RRINWR
Trigger: CCTCCAGTTTATCCTCCTCAAGCTCCCAAAGGGATT...GGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAATTCTTCCGCAGAGTCTaGTCTTTGGCCATGAGGCCC +
Preference number: 5 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKFFRRV*SLAMRP
Trigger: GGGCCTCATGGCCAAAGACAAGACTCTGCGGAAGAA...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp GGAGGGAGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCTCAATAAACTGGGCATaGCTGTGGTTCCTCCGTAGC +
Preference number: 5 (lower is better)
Translates to: GGRTEVVVRTSTKSFLQISINWA*LWFLRS
Trigger: GCTACGGAGGAACCACAGCAATGCCCAGTTTATTGA...GATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp TTGGGGTTAGAGTCGGGGGAGGATCAGAATGTCTTGCCCAAGGTTAAGAAGCTGTCAGCAGTGCAAAAGTaGACAGCCTCGGCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: LGLESGEDQNVLPKVKKLSAVQK*TASAKL
Trigger: CAACTTTGCCGAGGCTGTCAACTTTTGCACTGCTGA...CAGCTTCTTAACCTTGGGCAAGACATTCTGATCCTCCCCCGACTCTAACCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGATGGCGCAAGGCAGGTaGTTCATCTGGTCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGMAQGR*FIWSRK
Trigger: CTTTCTGGACCAGATGAACAACCTGCCTTGCGCCAT...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAATGTTCCAGAACACCCTaGACATCCCCAATCTGGTGC +
Preference number: 5 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKCSRTP*TSPIWC
Trigger: GCACCAGATTGGGGATGTCAAGGGTGTTCTGGAACA...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAGGAGAGTCCCCCAGTTaGCATATACACTGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKGESPS*HIHWPC
Trigger: ACAAGGCCAGTGTATATGCAAACTGGGGGACTCTCC...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp AGGATAAACTGGAGGGCATCAACTGGGGGAGGTTGTAGTGTAGGAGTTTGGGTGAGAAGCTGGTGGAACTaGATTTCAGAACCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RINWRASTGGGCSVGVWVRSWWN*ISEPRA
Trigger: AGCTCTGGGTTCTGAAATCAAGTTCCACCAGCTTCT...CACCCAAACTCCTACACTACAACCTCCCCCAGTTGATGCCCTCCAGTTTATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS TCA 90 bp CTCAGGGAACACAGTCTGACAACAGAATCCCAGACTCTCCAACTCTaGAAGGAAGGACCACTGGTCTCTGCTCTCAAGGTTTTGATGTGT +
Preference number: 5 (lower is better)
Translates to: LREHSLTTESQTLQL*KEGPLVSALKVLMC
Trigger: ACACATCAAAACCTTGAGAGCAGAGACCAGTGGTCCTTCCTTTCAGAGTTGGAGAGTCTGGGATTCTGTTGTCAGACTGTGTTCCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481369.1
CDS-3UTR CAA 90 bp GCCCATCCATCTATCTGCCTCAGGTGTCTGGGAATGCTGGTTAGAGGCTACCAGGGTCTGAACAATACCTaGGAGTCAGAATACAAAAGT +
Preference number: 5 (lower is better)
Translates to: AHPSICLRCLGMLVRGYQGLNNT*ESEYKS
Trigger: ACTTTTGTATTCTGACTCCAAGGTATTGTTCAGACC...CTGGTAGCCTCTAACCAGCATTCCCAGACACCTGAGGCAGATAGATGGATGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375401.8
ENST00000404049.7
CDS-3UTR CAA 90 bp AGGACTGAGGTGGTTGTGAGGACAAGCACCAAAAGCTTTCTTCAGATCACAGGGGTAGTGGTCACCATTTaGGATCTCATCAACATCAGC +
Preference number: 5 (lower is better)
Translates to: RTEVVVRTSTKSFLQITGVVVTI*DLINIS
Trigger: GCTGATGTTGATGAGATCCAAAATGGTGACCACTAC...CCCTGTGATCTGAAGAAAGCTTTTGGTGCTTGTCCTCACAACCACCTCAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS-3UTR CAA 90 bp CTTTCTTCAGATCACAGGGAGCCCTGTTCAGCTCCCCAGCCAAATTCCTTTAAAAGAGAAAATAGTTCATaGCAACGGCGGAGGAACAAG +
Preference number: 5 (lower is better)
Translates to: LSSDHREPCSAPQPNSFKRENSS*QRRRNK
Trigger: CTTGTTCCTCCGCCGTTGCAATGAACTATTTTCTCT...TTTAAAGGAATTTGGCTGGGGAGCTGAACAGGGCTCCCTGTGATCTGAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS TCA 90 bp CTGGTTTGTGCGGACAACCTGAAGAACACAAAAGGCCATGGCTGTTaGGATAGAGATTTTCCTGTATACAGACCTGACTTAAGTGCAAGG +
Preference number: 5 (lower is better)
Translates to: LVCADNLKNTKGHGC*DRDFPVYRPDLSAR
Trigger: CCTTGCACTTAAGTCAGGTCTGTATACAGGAAAATCTCTATCTCAACAGCCATGGCCTTTTGTGTTCTTCAGGTTGTCCGCACAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481369.1
CDS-3UTR CAA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGTTCTTCCGCAGAGTCTaGTCTTTGGCCATGAGGCCC +
Preference number: 5 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGFFRRV*SLAMRP
Trigger: GGGCCTCATGGCCAAAGACAAGACTCTGCGGAAGAA...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGGTAGTGGTCACCATTTaGGATCTCATCAACATCAGC +
Preference number: 5 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGVVVTI*DLINIS
Trigger: GCTGATGTTGATGAGATCCAAAATGGTGACCACTAC...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS-3UTR CAA 90 bp ATTATACGATTCCATTTATGTAAAATGTCCAGAATAGGCAAATGGGATGAGGGGTGGGGTTTGTATTCCTaGTCCTTCTCCTCATTATCA +
Preference number: 5 (lower is better)
Translates to: IIRFHLCKMSRIGKWDEGWGLYS*SFSSLS
Trigger: TGATAATGAGGAGAAGGACAAGGAATACAAACCCCA...CCCCTCATCCCATTTGCCTATTCTGGACATTTTACATAAATGGAATCGTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452825.7
CDS TCA 72 bp GACCAGCCACCCTGTGGGGGCCAGCTTCCTGGCCGCTaGCCAGTCCCAGAGCTCGGGACACGCAAGCCTCTG +
Preference number: 6 (lower is better)
Translates to: DQPPCGGQLPGR*PVPELGTRKPL
Trigger: CAGAGGCTTGCGTGTCCCGAGCTCTGGGACTGGTCAGCGGCCAGGAAGCTGGCCCCCACAGGGTGGCTGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
ENST00000477109.1
CDS CCA 72 bp ATCGTCGGACCCCGGCTCCATGGTGGGCCCGAGGTCTaGGCCAGGGATCGGGAGGCTTGGACCGCCCTTAAG +
Preference number: 6 (lower is better)
Translates to: IVGPRLHGGPEV*ARDREAWTALK
Trigger: CTTAAGGGCGGTCCAAGCCTCCCGATCCCTGGCCCAGACCTCGGGCCCACCATGGAGCCGGGGTCCGACGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS CCA 72 bp GTGGCGGTAGGAAATCGTCGGACCCCGGCTCCATGGTaGGCCCGAGGTCTGGGCCAGGGATCGGGAGGCTTG +
Preference number: 6 (lower is better)
Translates to: VAVGNRRTPAPW*ARGLGQGSGGL
Trigger: CAAGCCTCCCGATCCCTGGCCCAGACCTCGGGCCCACCATGGAGCCGGGGTCCGACGATTTCCTACCGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS CAA 90 bp CCTCCTGGACCTCCTCAGCCTCTGGCCCTGAGCTCCGTACCCTCTTaGGCTCTAGCTCCTCTCGGGCTGGGTCATCGCCCTCCCCACCCC +
Preference number: 6 (lower is better)
Translates to: PPGPPQPLALSSVPS*ALAPLGLGHRPPHP
Trigger: GGGGTGGGGAGGGCGATGACCCAGCCCGAGAGGAGCTAGAGCCAAAGAGGGTACGGAGCTCAGGGCCAGAGGCTGAGGAGGTCCAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
CDS TCA 72 bp GGGCTACACTGGCACCCGCGACCAACAGTCCTCGCATaGCAGCCAAGGTGCCCCTTCGGGCTGAGGGGGCCA +
Preference number: 6 (lower is better)
Translates to: GLHWHPRPTVLA*QPRCPFGLRGP
Trigger: TGGCCCCCTCAGCCCGAAGGGGCACCTTGGCTGTCATGCGAGGACTGTTGGTCGCGGGTGCCAGTGTAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS TCA 72 bp GGGGCGTGTGGCCGTCGTGCTCTGAGAGTCTCAGGCTaGCTCTACTGCTACCGCCTCTTCGTCCCGCTCCGT +
Preference number: 6 (lower is better)
Translates to: GACGRRALRVSG*LYCYRLFVPLR
Trigger: ACGGAGCGGGACGAAGAGGCGGTAGCAGTAGAGTCAGCCTGAGACTCTCAGAGCACGACGGCCACACGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS TCA 72 bp GCCGAGGGCCTAAGGGGGCGTGTGGCCGTCGTGCTCTaGGAGTCTCAGGCTGACTCTACTGCTACCGCCTCT +
Preference number: 6 (lower is better)
Translates to: AEGLRGRVAVVL*ESQADSTATAS
Trigger: AGAGGCGGTAGCAGTAGAGTCAGCCTGAGACTCTCAGAGCACGACGGCCACACGCCCCCTTAGGCCCTCGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS GCA 72 bp CAGCCAAGGTGCCCCTTCGGGCTGAGGGGGCCAGTGTaGGTTTCACCTCATCCAGCCATCGCGCCTGTTCCA +
Preference number: 6 (lower is better)
Translates to: QPRCPFGLRGPV*VSPHPAIAPVP
Trigger: TGGAACAGGCGCGATGGCTGGATGAGGTGAAACGCACACTGGCCCCCTCAGCCCGAAGGGGCACCTTGGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS CAA 72 bp CCTCCTCAGCCTCTGGCCCTGAGCTCCGTACCCTCTTaGGCTCTAGCTCCTCTCGGGCTGGGTCATCGCCCT +
Preference number: 6 (lower is better)
Translates to: PPQPLALSSVPS*ALAPLGLGHRP
Trigger: AGGGCGATGACCCAGCCCGAGAGGAGCTAGAGCCAAAGAGGGTACGGAGCTCAGGGCCAGAGGCTGAGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
CDS TCA 72 bp GGACCGCCCTTAAGGACTCATGGCGCCGCCGCTGTTTaGAGCCGAGGCAATGCTCGGAGGCTAGGCCCTAAG +
Preference number: 6 (lower is better)
Translates to: GPPLRTHGAAAV*SRGNARRLGPK
Trigger: CTTAGGGCCTAGCCTCCGAGCATTGCCTCGGCTTCAAACAGCGGCGGCGCCATGAGTCCTTAAGGGCGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS TCA 72 bp GTCTGTGCTAGGCTCAGCCACTGTCACAACTGTTGCTaGGGCGGCTGCTGTGGGCAGGGCAGATGCAGCCGG +
Preference number: 6 (lower is better)
Translates to: VCARLSHCHNCC*GGCCGQGRCSR
Trigger: CCGGCTGCATCTGCCCTGCCCACAGCAGCCGCCTCAGCAACAGTTGTGACAGTGGCTGAGCCTAGCACAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
CDS CCA 72 bp AGGGATCGGGAGGCTTGGACCGCCCTTAAGGACTCATaGCGCCGCCGCTGTTTGAAGCCGAGGCAATGCTCG +
Preference number: 6 (lower is better)
Translates to: RDREAWTALKDS*RRRCLKPRQCS
Trigger: CGAGCATTGCCTCGGCTTCAAACAGCGGCGGCGCCATGAGTCCTTAAGGGCGGTCCAAGCCTCCCGATCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS CCA 72 bp CGCCTCTTCGTCCCGCTCCGTTTCTTCCAAACTGTGTaGTTGCCTCCCCACTACCGCAGCCTTCGCCACCAC +
Preference number: 6 (lower is better)
Translates to: RLFVPLRFFQTV*LPPHYRSLRHH
Trigger: GTGGTGGCGAAGGCTGCGGTAGTGGGGAGGCAACCACACAGTTTGGAAGAAACGGAGCGGGACGAAGAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS CCA 72 bp TTCTGGGGGCCGCTTACACTCCGCCATGACACACTTTaGGCACCGCCAGACACCCTTGGGGATCTCAGGCAG +
Preference number: 6 (lower is better)
Translates to: FWGPLTLRHDTL*APPDTLGDLRQ
Trigger: CTGCCTGAGATCCCCAAGGGTGTCTGGCGGTGCCCAAAGTGTGTCATGGCGGAGTGTAAGCGGCCCCCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS GCA 72 bp TCTTCGTCCCGCTCCGTTTCTTCCAAACTGTGTGGTTaGCTCCCCACTACCGCAGCCTTCGCCACCACAGTT +
Preference number: 6 (lower is better)
Translates to: SSSRSVSSKLCG*LPTTAAFATTV
Trigger: AACTGTGGTGGCGAAGGCTGCGGTAGTGGGGAGGCAACCACACAGTTTGGAAGAAACGGAGCGGGACGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349663.6
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000428012.1
ENST00000429877.5
ENST00000452825.7
CDS GCA 72 bp TGCTGTGGTTCCTCCGTAGCCTCATGGTCATCTTGGTaGAGGGTTCTGGGCTGTGACTCAGCTCCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: CCGSSVASWSSW*RVLGCDSAPPC
Trigger: GCAAGGAGGAGCTGAGTCACAGCCCAGAACCCTGCACCAAGATGACCATGAGGCTACGGAGGAACCACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
ENST00000497995.1
CDS CCA 72 bp GTATTCCCGGGTAGCCTGCTCAAAGCCAAAGGCTTCTaGGGGCCGCTTACACTCCGCCATGACACACTTTGG +
Preference number: 6 (lower is better)
Translates to: VFPGSLLKAKGF*GPLTLRHDTLW
Trigger: CCAAAGTGTGTCATGGCGGAGTGTAAGCGGCCCCCAGAAGCCTTTGGCTTTGAGCAGGCTACCCGGGAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS CCA 72 bp CCTCCCCGAACTTCCACCAGAATAGGGTGCTTGATCTaGGGTACTCTCCCCACCTTCTCCAGCAGGGCCTTT +
Preference number: 6 (lower is better)
Translates to: PPRTSTRIGCLI*GTLPTFSSRAF
Trigger: AAAGGCCCTGCTGGAGAAGGTGGGGAGAGTACCCCAGATCAAGCACCCTATTCTGGTGGAAGTTCGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465402.1
ENST00000481369.1
CDS CAA 72 bp GGCCCCTCCTTATCTTTCTTCCGCAGAGTCTTGTCTTaGGCCATGAGGCCCAGGCCCATCATCTTGGGGCCT +
Preference number: 6 (lower is better)
Translates to: GPSLSFFRRVLS*AMRPRPIILGP
Trigger: AGGCCCCAAGATGATGGGCCTGGGCCTCATGGCCAAAGACAAGACTCTGCGGAAGAAAGATAAGGAGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
ENST00000497995.1
CDS TCA 72 bp CCTTATCTTTCTTCCGCAGAGTCTTGTCTTTGGCCATaGGGCCCAGGCCCATCATCTTGGGGCCTGCCCCAT +
Preference number: 6 (lower is better)
Translates to: PYLSSAESCLWP*GPGPSSWGLPH
Trigger: ATGGGGCAGGCCCCAAGATGATGGGCCTGGGCCTCATGGCCAAAGACAAGACTCTGCGGAAGAAAGATAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
ENST00000497995.1
CDS GCA 72 bp CCACTGGTAGCATACTCCTCCTCTTCGGGGGTTAGGTaGCGTTTACTGTCACTGACAGGGAAACCGCTGCCA +
Preference number: 6 (lower is better)
Translates to: PLVAYSSSSGVR*RLLSLTGKPLP
Trigger: TGGCAGCGGTTTCCCTGTCAGTGACAGTAAACGGCACCTAACCCCCGAAGAGGAGGAGTATGCTACCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
ENST00000497100.5
CDS CCA 72 bp GTTCAGTTTCACTCTCGTCTGGGCCTGAAGAAGAAATaGCTCAAAGAGGCTGGCCACCCCCTCCCACTGACC +
Preference number: 6 (lower is better)
Translates to: VQFHSRLGLKKK*LKEAGHPLPLT
Trigger: GGTCAGTGGGAGGGGGTGGCCAGCCTCTTTGAGCCATTTCTTCTTCAGGCCCAGACGAGAGTGAAACTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495519.1
CDS TCA 72 bp AGCCTCATGGTCATCTTGGTGCAGGGTTCTGGGCTGTaGCTCAGCTCCTCCTTGCTCTCCAGGAAGGTCTTA +
Preference number: 6 (lower is better)
Translates to: SLMVILVQGSGL*LSSSLLSRKVL
Trigger: TAAGACCTTCCTGGAGAGCAAGGAGGAGCTGAGTCACAGCCCAGAACCCTGCACCAAGATGACCATGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
ENST00000497995.1
CDS GCA 72 bp CCTTCCGCGGGGTGTCCTTCCGAGCCTCGTATACGTTaGGTCACACCAAGCCCTAGGAAACCTTCATATAGT +
Preference number: 6 (lower is better)
Translates to: PSAGCPSEPRIR*VTPSPRKPSYS
Trigger: ACTATATGAAGGTTTCCTAGGGCTTGGTGTGACGCAACGTATACGAGGCTCGGAAGGACACCCCGCGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000452825.7
CDS GCA 72 bp TCAGCTTTAAAGGAGTCGGCCATCTCGCCAAAGCTCTaGAGAGTGTATTCCCGGGTAGCCTGCTCAAAGCCA +
Preference number: 6 (lower is better)
Translates to: SALKESAISPKL*RVYSRVACSKP
Trigger: TGGCTTTGAGCAGGCTACCCGGGAATACACTCTGCAGAGCTTTGGCGAGATGGCCGACTCCTTTAAAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS TCA 72 bp ACGTGTGTCCTGTCTTGCCTGAACACTTTAAGCTTTTaGAAGGAGCCAAGCATGGCCTGCTGCTCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: TCVLSCLNTLSF*KEPSMACCSGP
Trigger: GGGACCTGAGCAGCAGGCCATGCTTGGCTCCTTTCAAAAGCTTAAAGTGTTCAGGCAAGACAGGACACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477109.1
CDS CCA 72 bp CGGCAGACATATGACTCAATAAACTGGGCATTGCTGTaGTTCCTCCGTAGCCTCATGGTCATCTTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: RQTYDSINWALL*FLRSLMVILVQ
Trigger: CTGCACCAAGATGACCATGAGGCTACGGAGGAACCACAGCAATGCCCAGTTTATTGAGTCATATGTCTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000375401.8
ENST00000404049.7
ENST00000452825.7
CDS CAA 72 bp TTTTCACTATACGCCAAGAGTAGAGGCTACATCTTCTaGGTGCTGCCTCTGCCTCCCCGAACTTCCACCAGA +
Preference number: 6 (lower is better)
Translates to: FSLYAKSRGYIF*VLPLPPRTSTR
Trigger: TCTGGTGGAAGTTCGGGGAGGCAGAGGCAGCACCAAGAAGATGTAGCCTCTACTCTTGGCGTATAGTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465402.1
ENST00000481369.1
CDS TCA 72 bp CACAGTCTGACAACAGAATCCCAGACTCTCCAACTCTaGAAGGAAGGACCACTGGTCTCTGCTCTCAAGGTT +
Preference number: 6 (lower is better)
Translates to: HSLTTESQTLQL*KEGPLVSALKV
Trigger: AACCTTGAGAGCAGAGACCAGTGGTCCTTCCTTTCAGAGTTGGAGAGTCTGGGATTCTGTTGTCAGACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481369.1
CDS GCA 72 bp TTTCTCCCAATGAACCGGATCCCAGACTCTAGGCAGTaGTTAGCCCCACCTCACTCTCATTTCTTTCGTTTT +
Preference number: 6 (lower is better)
Translates to: FLPMNRIPDSRQ*LAPPHSHFFRF
Trigger: AAAACGAAAGAAATGAGAGTGAGGTGGGGCTAAGCACTGCCTAGAGTCTGGGATCCGGTTCATTGGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495519.1
CDS TCA 72 bp TTAAGGAGACAAAGAAAAGCCTCAGGGAACACAGTCTaGCAACAGAATCCCAGACTCTCCAACTCTGAAAGG +
Preference number: 6 (lower is better)
Translates to: LRRQRKASGNTV*QQNPRLSNSER
Trigger: CCTTTCAGAGTTGGAGAGTCTGGGATTCTGTTGTCAGACTGTGTTCCCTGAGGCTTTTCTTTGTCTCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481369.1
CDS GCA 72 bp TTTCCTATCAATTTTCATCTTTCTGTAGCAGTCTCATaGAACCTTCTGATCTGTCCCAATCTGGACCAGCTG +
Preference number: 6 (lower is better)
Translates to: FPINFHLSVAVS*NLLICPNLDQL
Trigger: CAGCTGGTCCAGATTGGGACAGATCAGAAGGTTGCATGAGACTGCTACAGAAAGATGAAAATTGATAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481369.1
CDS CCA 72 bp CTTCATATAGTGGAGACCGAGCTAAATAGGCTGGTATaGGTTTCTATTTGGAAGGGGTTACTCAAAAGTACC +
Preference number: 6 (lower is better)
Translates to: LHIVETELNRLV*VSIWKGLLKST
Trigger: GGTACTTTTGAGTAACCCCTTCCAAATAGAAACCCATACCAGCCTATTTAGCTCGGTCTCCACTATATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375379.7
ENST00000375383.7
ENST00000452825.7
CDS CCA 72 bp CGACTTAAGGTTGCTGGTAAAGGGTATAGCAGAGAATaGTATGTGGTTTTCAATCGAGATGCATCTAGTTCT +
Preference number: 6 (lower is better)
Translates to: RLKVAGKGYSRE*YVVFNRDASSS
Trigger: AGAACTAGATGCATCTCGATTGAAAACCACATACCATTCTCTGCTATACCCTTTACCAGCAACCTTAAGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465402.1
ENST00000481369.1
CDS CAA 90 bp TTCTCCCTTCCCCACAGCCAATCACTTCCACCTCTTCTGATTATTTaGGCGTTGATTATAACTACCTTAAATAACATGCTTCTAGACTAT +
Preference number: 6 (lower is better)
Translates to: FSLPHSQSLPPLLII*ALIITTLNNMLLDY
Trigger: ATAGTCTAGAAGCATGTTATTTAAGGTAGTTATAATCAACGCCAAAATAATCAGAAGAGGTGGAAGTGATTGGCTGTGGGGAAGGGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481369.1
CDS CAA 72 bp CCCCACAGCCAATCACTTCCACCTCTTCTGATTATTTaGGCGTTGATTATAACTACCTTAAATAACATGCTT +
Preference number: 6 (lower is better)
Translates to: PHSQSLPPLLII*ALIITTLNNML
Trigger: AAGCATGTTATTTAAGGTAGTTATAATCAACGCCAAAATAATCAGAAGAGGTGGAAGTGATTGGCTGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481369.1
CDS CAA 72 bp AGCCAATCACTTCCACCTCTTCTGATTATTTTGGCGTaGATTATAACTACCTTAAATAACATGCTTCTAGAC +
Preference number: 6 (lower is better)
Translates to: SQSLPPLLIILA*IITTLNNMLLD
Trigger: GTCTAGAAGCATGTTATTTAAGGTAGTTATAATCAACGCCAAAATAATCAGAAGAGGTGGAAGTGATTGGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481369.1