RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KDM2A (Homo sapiens)

Ensembl gene IDs: ENSG00000173120

Ensembl transcript IDs: ENST00000308783.9, ENST00000398645.6, ENST00000517637.2, ENST00000524657.1, ENST00000525041.5, ENST00000525379.1, ENST00000526258.5, ENST00000527157.1, ENST00000528380.1, ENST00000529006.7, ENST00000529124.1, ENST00000530342.2, ENST00000531696.5, ENST00000532436.5, ENST00000534486.1

Found 862 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTAGACACAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTaGAGGAGCCTGGCTGGGAGGCAGGTTGGGGCTTGGCCCAGTCCT +
Preference number: 1 (lower is better)
Translates to: LDTGLGSGGSAKPEA*RSLAGRQVGAWPSP
Trigger: AGGACTGGGCCAAGCCCCAACCTGCCTCCCAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTGTGTCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR TCA 90 bp GGACTCCTGGGGCTGCTGGCCCCTCCTGCGCAAGCCGGGAGAGTGTaGTGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAT +
Preference number: 1 (lower is better)
Translates to: GLLGLLAPPAQAGRV*WRRDAHWTPQEPGH
Trigger: ATGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCGGCTTGCGCAGGAGGGGCCAGCAGCCCCAGGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR TCA 90 bp GAGGCACGTGCACACCCCCTTCCATGGCTGCAGGCAGAGGGCTGGTaGCTGGCTTCTAAGCAGGACCCCCTGACTGCCCTGAAAGTTCAG +
Preference number: 1 (lower is better)
Translates to: EARAHPLPWLQAEGW*LASKQDPLTALKVQ
Trigger: CTGAACTTTCAGGGCAGTCAGGGGGTCCTGCTTAGAAGCCAGTCACCAGCCCTCTGCCTGCAGCCATGGAAGGGGGTGTGCACGTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR GCA 90 bp CACACACACGCGCAGAATACACTCAGCCACACACACAGAGGCACGTaGACACCCCCTTCCATGGCTGCAGGCAGAGGGCTGGTGACTGGC +
Preference number: 1 (lower is better)
Translates to: HTHAQNTLSHTHRGT*TPPSMAAGRGLVTG
Trigger: GCCAGTCACCAGCCCTCTGCCTGCAGCCATGGAAGGGGGTGTGCACGTGCCTCTGTGTGTGTGGCTGAGTGTATTCTGCGCGTGTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR CCA 90 bp CAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGGCCTCCTaGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCCTGTG +
Preference number: 1 (lower is better)
Translates to: QMKVAQTPQTESPAS*QASKRAGASTAQPV
Trigger: CACAGGCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR TCA 90 bp CCCGGTGCTTGGAAAGATGGAGGCAGGGGTTCTGGTCCTGCAGTCTaGGGGCAGGCTCTCCTGGCAAGGCCGTGTCTAAGAGCAGATTGT +
Preference number: 1 (lower is better)
Translates to: PGAWKDGGRGSGPAV*GQALLARPCLRADC
Trigger: ACAATCTGCTCTTAGACACGGCCTTGCCAGGAGAGCCTGCCCTCAGACTGCAGGACCAGAACCCCTGCCTCCATCTTTCCAAGCACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CCA 90 bp GAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTaGCCATGGAGACAGGGCCGTTTTCTTCCCTGGGAGTTTGCTCAG +
Preference number: 1 (lower is better)
Translates to: ESVMEERRALDTTRT*PWRQGRFLPWEFAQ
Trigger: CTGAGCAAACTCCCAGGGAAGAAAACGGCCCTGTCTCCATGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR GCA 90 bp CGGTGGAGTAAGCAAGTCCCGAATTTGAGGGTCCTTGATTCCTACTaGCCACCGAAGATCAAGGGTCCTGAGAAGGGGGCAGCTGGAGGT +
Preference number: 1 (lower is better)
Translates to: RWSKQVPNLRVLDSY*PPKIKGPEKGAAGG
Trigger: ACCTCCAGCTGCCCCCTTCTCAGGACCCTTGATCTTCGGTGGGCAGTAGGAATCAAGGACCCTCAAATTCGGGACTTGCTTACTCCACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR CCA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTaGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTC +
Preference number: 1 (lower is better)
Translates to: TGLGGKEGTTLPLLL*KWQGCSWRLSSQWL
Trigger: GAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CCA 90 bp CTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTaGCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTT +
Preference number: 1 (lower is better)
Translates to: LGGKEGTTLPLLLWK*QGCSWRLSSQWLTL
Trigger: AAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR TCA 90 bp CAGCTTCTCGTCAGACAGGCAGTAGAGGCTGTTGATGGACAAGTCTaGGATGAAGTGCTCGCAGGCTTTTCGAGTGATCTGCTTGCATCC +
Preference number: 1 (lower is better)
Translates to: QLLVRQAVEAVDGQV*DEVLAGFSSDLLAS
Trigger: GGATGCAAGCAGATCACTCGAAAAGCCTGCGAGCACTTCATCTCAGACTTGTCCATCAACAGCCTCTACTGCCTGTCTGACGAGAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR GCA 90 bp ATGGACAAGTCTGAGATGAAGTGCTCGCAGGCTTTTCGAGTGATCTaGTTGCATCCTCGAAGGTCGATCAAGGTGACGTTGGCAATGCGC +
Preference number: 1 (lower is better)
Translates to: MDKSEMKCSQAFRVI*LHPRRSIKVTLAMR
Trigger: GCGCATTGCCAACGTCACCTTGATCGACCTTCGAGGATGCAAGCAGATCACTCGAAAAGCCTGCGAGCACTTCATCTCAGACTTGTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR TCA 90 bp GGGAAGATCGGTTTCCTGTTGAATCTGGGCTGGGTGTGTCTTAGCTaGTCTTCTGTATCAGCTTCTCGTCAGACAGGCAGTAGAGGCTGT +
Preference number: 1 (lower is better)
Translates to: GKIGFLLNLGWVCLS*SSVSASRQTGSRGC
Trigger: ACAGCCTCTACTGCCTGTCTGACGAGAAGCTGATACAGAAGATCAGCTAAGACACACCCAGCCCAGATTCAACAGGAAACCGATCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR GCA 90 bp AGGAGGTCTTTCAGTCCTGGCAGCCTATTGACGAGCCATGTCAGTTaGTTTTTAGAGATGTTGGTCCAACTGAGGTCAAGGCTGACTGGC +
Preference number: 1 (lower is better)
Translates to: RRSFSPGSLLTSHVS*FLEMLVQLRSRLTG
Trigger: GCCAGTCAGCCTTGACCTCAGTTGGACCAACATCTCTAAAAAGCAACTGACATGGCTCGTCAATAGGCTGCCAGGACTGAAAGACCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR CCA 90 bp TTTCCTCAAAGTTTCAACCCCAGATTATTGGGGCCTGGAGACCAATaGAAGTGGGCAGAGGGTCATGGGAGCAGACTGCTGTTTGTAAGG +
Preference number: 1 (lower is better)
Translates to: FPQSFNPRLLGPGDQ*KWAEGHGSRLLFVR
Trigger: CCTTACAAACAGCAGTCTGCTCCCATGACCCTCTGCCCACTTCCATTGGTCTCCAGGCCCCAATAATCTGGGGTTGAAACTTTGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR TCA 90 bp AAACCAAAACCCAAAAGAAACCATTGGCTTGGAAATTTCTGTGGATaGAATGTCCCAAAGTCAGAGGCACTCTCCCGGCACAATCCCTGC +
Preference number: 1 (lower is better)
Translates to: KPKPKRNHWLGNFCG*NVPKSEALSRHNPC
Trigger: GCAGGGATTGTGCCGGGAGAGTGCCTCTGACTTTGGGACATTTCATCCACAGAAATTTCCAAGCCAATGGTTTCTTTTGGGTTTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CCA 90 bp ATACCCAGGGTTCTTTACAGAGAAGTTCCCCTAACTGAGGCACTCTaGAATAAGTCACTGGCATTTCCTCAAAGTTTCAACCCCAGATTA +
Preference number: 1 (lower is better)
Translates to: IPRVLYREVPLTEAL*NKSLAFPQSFNPRL
Trigger: TAATCTGGGGTTGAAACTTTGAGGAAATGCCAGTGACTTATTCCAGAGTGCCTCAGTTAGGGGAACTTCTCTGTAAAGAACCCTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCTGGCCTCAGAGCCCGTaGAGGGTCGAGGAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSWPQSP*RVEERL
Trigger: GAGCCTCTCCTCGACCCTGCACGGGCTCTGAGGCCA...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR CCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGAGAGGCTCTCCTCGGTaGGGAGTCAGGGGAAGATCG +
Preference number: 2 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLRGSPR*GVRGRS
Trigger: CGATCTTCCCCTGACTCCCCACCGAGGAGAGCCTCT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR TCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCACAAACACCCCAAACTaGGAGCCCGGCCTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGTNTPN*EPGLLA
Trigger: TGCCAGGAGGCCGGGCTCTCAGTTTGGGGTGTTTGT...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR TCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCTCAACAGCACCAGTGTaGTCGGCACGGGTCTGGGAC +
Preference number: 2 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSSTAPV*SARVWD
Trigger: GTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGA...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR GCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCTCAGAACCAGGCACTaGTGGGGACCATGGATGGGG +
Preference number: 2 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGLRTRH*WGPWMG
Trigger: CCCCATCCATGGTCCCCAGCAGTGCCTGGTTCTGAG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR CCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCAGAACCAGGCACTGCTaGGGACCATGGATGGGGAGG +
Preference number: 2 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGRTRHC*GPWMGR
Trigger: CCTCCCCATCCATGGTCCCCAGCAGTGCCTGGTTCT...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR TCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCGTAAGGTGGCTGCAGTaGCTGAGGTCGAGTCGAGAC +
Preference number: 2 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSVRWLQ*LRSSRD
Trigger: GTCTCGACTCGACCTCAGTCACTGCAGCCACCTTAC...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR CCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCGACACCACAAGAACCTaGCCATGGAGACAGGGCCGT +
Preference number: 2 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSDTTRT*PWRQGR
Trigger: ACGGCCCTGTCTCCATGGCCAGGTTCTTGTGGTGTC...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR TCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCAGGGCCCAGTGCAGATaGAGGTTGCACAAACACCCC +
Preference number: 2 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPRAQCR*RLHKHP
Trigger: GGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCT...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR TCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCGTCCTGGCAGCCTATTaGCGAGCCATGTCAGTTGCT +
Preference number: 2 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPVLAAY*RAMSVA
Trigger: AGCAACTGACATGGCTCGTCAATAGGCTGCCAGGAC...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR TCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGGGTGGCTGCAGTGACTaGGGTCGAGTCGAGACAGGA +
Preference number: 2 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLGGCSD*GRVETG
Trigger: TCCTGTCTCGACTCGACCTCAGTCACTGCAGCCACC...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR TCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGAGTAGATTGGAGGACTaGTCTGTAAGGTGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLSRLED*SVRWLQ
Trigger: CTGCAGCCACCTTACAGATCAGTCCTCCAATCTACT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR TCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCGTTGATGGACAAGTCTaGGATGAAGTGCTCGCAGGC +
Preference number: 2 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSVDGQV*DEVLAG
Trigger: GCCTGCGAGCACTTCATCTCAGACTTGTCCATCAAC...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR TCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCAGATCGGTTTCCTGTTaGATCTGGGCTGGGTGTGTC +
Preference number: 2 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGRSVSC*IWAGCV
Trigger: GACACACCCAGCCCAGATTCAACAGGAAACCGATCT...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR GCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCATGGCCTCAGAGCCCGTaGAGGGTCGAGGAGAGGCTC +
Preference number: 2 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSWPQSP*RVEERL
Trigger: GAGCCTCTCCTCGACCCTGCACGGGCTCTGAGGCCA...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR GCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGTGGGACTCCTGGGGCTaGTGGCCCCTCCTGCGCAAG +
Preference number: 2 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLWDSWG*WPLLRK
Trigger: CTTGCGCAGGAGGGGCCAGCAGCCCCAGGAGTCCCA...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCTGGGTAGCAACGAAATaGGTGTGTCCCTGGGGTAGA +
Preference number: 2 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSWVATK*VCPWGR
Trigger: TCTACCCCAGGGACACACCCATTTCGTTGCTACCCA...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR CCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCGGCTGGGAGGCAGGTTaGGGCTTGGCCCAGTCCTCT +
Preference number: 2 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGGWEAG*GLAQSS
Trigger: AGAGGACTGGGCCAAGCCCCAACCTGCCTCCCAGCC...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR TCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTACAAACACCCCAAACTaGGAGCCCGGCCTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFTNTPN*EPGLLA
Trigger: TGCCAGGAGGCCGGGCTCTCAGTTTGGGGTGTTTGT...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCGCTTTTCGAGTGATCTaGTTGCATCCTCGAAGGTCG +
Preference number: 2 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSAFRVI*LHPRRS
Trigger: CGACCTTCGAGGATGCAAGCAGATCACTCGAAAAGC...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR GCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGAGCTGCTGGCCCCTCCTaGGCAAGCCGGGAGAGTGTG +
Preference number: 2 (lower is better)
Translates to: LQEEESLRLGYRKRARKGAAGPS*ASRESV
Trigger: CACACTCTCCCGGCTTGCGCAGGAGGGGCCAGCAGC...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR TCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCACAAACACCCCAAACTaGGAGCCCGGCCTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGTNTPN*EPGLLA
Trigger: TGCCAGGAGGCCGGGCTCTCAGTTTGGGGTGTTTGT...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR TCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCAACAGCACCAGTGTaGTCGGCACGGGTCTGGGAC +
Preference number: 2 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGSTAPV*SARVWD
Trigger: GTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGA...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGTGTGATGTCAAGGCCTaGCAGCCGGAAGTCGGTCAT +
Preference number: 2 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLCDVKA*QPEVGH
Trigger: ATGACCGACTTCCGGCTGGCAGGCCTTGACATCACA...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR GCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCCCCCTCAGATCAATCTaGTACTCCCTTTTCCTTAGG +
Preference number: 2 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSPLRSI*YSLFLR
Trigger: CCTAAGGAAAAGGGAGTAGCAGATTGATCTGAGGGG...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR GCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCACCCCCTTCCATGGCTaGAGGCAGAGGGCTGGTGAC +
Preference number: 2 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCTPFHG*RQRAGD
Trigger: GTCACCAGCCCTCTGCCTGCAGCCATGGAAGGGGGT...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR TCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAGAAGCGTGGCATCTGTaGTGTCAAGGCCTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: WPRWQRGDHSASIALEVAEAWHL*CQGLPA
Trigger: GGCTGGCAGGCCTTGACATCACAGATGCCACGCTTC...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR GCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTGGACAGGCCGTTCAATaGAAAGTAAAAGGGGGCAGC +
Preference number: 2 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFGQAVQ*KVKGGS
Trigger: GCTGCCCCCTTTTACTTTGCATTGAACGGCCTGTCC...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAAGAACCAGGCACTGCTaGGGACCATGGATGGGGAGG +
Preference number: 2 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLRTRHC*GPWMGR
Trigger: CCTCCCCATCCATGGTCCCCAGCAGTGCCTGGTTCT...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR TCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCGAAGATCAAGGGTCCTaGGAAGGGGGCAGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: HSASIALEVARVQLASLFEDQGS*EGGSWR
Trigger: CCTCCAGCTGCCCCCTTCTCAGGACCCTTGATCTTC...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR TCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGAGATCGGTTTCCTGTTaGATCTGGGCTGGGTGTGTC +
Preference number: 2 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPRSVSC*IWAGCV
Trigger: GACACACCCAGCCCAGATTCAACAGGAAACCGATCT...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR GCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGCGACAGCACAGCCTGTaGTTTCCCCTCAGATCAATC +
Preference number: 2 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPRQHSL*FPLRSI
Trigger: GATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCG...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR GCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCCTCAGAACCAGGCACTaGTGGGGACCATGGATGGGG +
Preference number: 2 (lower is better)
Translates to: HSASIALEVARVQLASLFLRTRH*WGPWMG
Trigger: CCCCATCCATGGTCCCCAGCAGTGCCTGGTTCTGAG...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAACACACAGAGGCACGTaGACACCCCCTTCCATGGCT +
Preference number: 2 (lower is better)
Translates to: WPRWQRGDHSASIALEVATHRGT*TPPSMA
Trigger: AGCCATGGAAGGGGGTGTGCACGTGCCTCTGTGTGT...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCGACAGGAGGGGCATGTaGCGAATTATGAGGCGAAGC +
Preference number: 2 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCDRRGM*RIMRRS
Trigger: GCTTCGCCTCATAATTCGCCACATGCCCCTCCTGTC...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR CCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTACAAGAACCTGGCCATaGAGACAGGGCCGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFTRTWP*RQGRFL
Trigger: AAGAAAACGGCCCTGTCTCCATGGCCAGGTTCTTGT...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CAA 90 bp AACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTaGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: NWPRWQRGDHSASIA*EVARVQLASLFSVA
Trigger: AGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR TCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCCAAGCCGGGAGAGTGTaGTGGAGGAGAGACGCGCAC +
Preference number: 2 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTQAGRV*WRRDAH
Trigger: GTGCGCGTCTCTCCTCCATCACACTCTCCCGGCTTG...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACGCTGCTGGCCCCTCCTaGGCAAGCCGGGAGAGTGTG +
Preference number: 2 (lower is better)
Translates to: QSFISSCHRLLLLSISSHAAGPS*ASRESV
Trigger: CACACTCTCCCGGCTTGCGCAGGAGGGGCCAGCAGC...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAACTTGGCCCAGTCCTCTaGCGCCTCCAGCTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: HMDQPSPLKTISPHSPKELGPVL*RLQLGG
Trigger: TCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAG...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTGAGAGCCCGGCCTCCTaGCAGGCGAGTAAGCGAGCA +
Preference number: 2 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPESPAS*QASKRA
Trigger: TGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCTC...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACAGGCCTGGAGGAGCCTaGCTGGGAGGCAGGTTGGGG +
Preference number: 2 (lower is better)
Translates to: QSFISSCHRLLLLSISSHRPGGA*LGGRLG
Trigger: CCCCAACCTGCCTCCCAGCCAGGCTCCTCCAGGCCT...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCCTCAACAAAGGGCGGTaGAGCGGGAGACACCATGCT +
Preference number: 2 (lower is better)
Translates to: HSASIALEVARVQLASLFLNKGR*SGRHHA
Trigger: AGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAG...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCAGAAAGGGACAGGGATaGACGACCAAAAGGCGGGGC +
Preference number: 2 (lower is better)
Translates to: HSASIALEVARVQLASLFRKGQG*TTKRRG
Trigger: GCCCCGCCTTTTGGTCGTCCATCCCTGTCCCTTTCT...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCCTCAGAACCAGGCACTaGTGGGGACCATGGATGGGG +
Preference number: 2 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTLRTRH*WGPWMG
Trigger: CCCCATCCATGGTCCCCAGCAGTGCCTGGTTCTGAG...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCCTCCCTCTGAGGACGTaGATCCTGGGAAAGCCTTCT +
Preference number: 2 (lower is better)
Translates to: HSASIALEVARVQLASLFLPLRT*ILGKPS
Trigger: AGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAG...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp CTGACCTGGTTTATCAGCCGGTGGAGTAAGCAAGTCCCGAATTTGAGGGTCCTTATGCCACTGAGGGCCTaGGGCACAATGGCCTTACAC +
Preference number: 2 (lower is better)
Translates to: LTWFISRWSKQVPNLRVLMPLRA*GTMALH
Trigger: GTGTAAGGCCATTGTGCCCCAGGCCCTCAGTGGCAT...AAGGACCCTCAAATTCGGGACTTGCTTACTCCACCGGCTGATAAACCAGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR CCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGAAACAAGCACGAGTGCTaGGCAGAACCAAGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: LQEEESLRLGYRKRARKGNKHEC*AEPSSR
Trigger: CCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTT...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGAAAATGGGTGTGTCCCTaGGGTAGACAGTTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: LQEEESLRLGYRKRARKGKWVCP*GRQFQL
Trigger: GAGCTGGAACTGTCTACCCCAGGGACACACCCATTT...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAAGCTAAACCAGAGGCCTaGAGGAGCCTGGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: HMDQPSPLKTISPHSPKEAKPEA*RSLAGR
Trigger: CCTCCCAGCCAGGCTCCTCCAGGCCTCTGGTTTAGC...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CAA 90 bp GTCCTGACCTGGTTTATCAGCCGGTGGAGTAAGCAAGTCCCGAATTaGAGGGTCCTTGATTCCTACTGCCCACCGAAGATCAAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: VLTWFISRWSKQVPN*RVLDSYCPPKIKGP
Trigger: AGGACCCTTGATCTTCGGTGGGCAGTAGGAATCAAGGACCCTCAAATTCGGGACTTGCTTACTCCACCGGCTGATAAACCAGGTCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR CAA 90 bp GACAAGTCTGAGATGAAGTGCTCGCAGGCTTTTCGAGTGATCTGCTaGCATCCTCGAAGGTCGATCAAGGTGACGTTGGCAATGCGCCGT +
Preference number: 2 (lower is better)
Translates to: DKSEMKCSQAFRVIC*HPRRSIKVTLAMRR
Trigger: ACGGCGCATTGCCAACGTCACCTTGATCGACCTTCGAGGATGCAAGCAGATCACTCGAAAAGCCTGCGAGCACTTCATCTCAGACTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR TCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAGCACAGTTAAGGACGTaGGGTTTGGGAGATCTCAAC +
Preference number: 2 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLAQLRT*GLGDLN
Trigger: GTTGAGATCTCCCAAACCTCACGTCCTTAACTGTGC...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR TCA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGGGAAACCTAATTATGTaGACAAGCACGAGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWGNLIM*TSTSAG
Trigger: CCCAGCACTCGTGCTTGTTCACATAATTAGGTTTCC...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR TCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCACAGTTCCAGCTCCTCTaGAGAGCTTCAACCCCAATA +
Preference number: 2 (lower is better)
Translates to: WPRWQRGDHSASIALEVAQFQLL*RASTPI
Trigger: TATTGGGGTTGAAGCTCTTCAGAGGAGCTGGAACTG...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTACGAGCCATGTCAGTTaGTTTTTAGAGATGTTGGTC +
Preference number: 2 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFTSHVS*FLEMLV
Trigger: GACCAACATCTCTAAAAAGCAACTGACATGGCTCGT...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR TCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCTGGGTGTGTCTTAGCTaGTCTTCTGTATCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCWVCLS*SSVSAS
Trigger: AGAAGCTGATACAGAAGATCAGCTAAGACACACCCA...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR GCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTACCCCTCAGATCAATCTaGTACTCCCTTTTCCTTAGG +
Preference number: 2 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLPLRSI*YSLFLR
Trigger: CCTAAGGAAAAGGGAGTAGCAGATTGATCTGAGGGG...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGGTAAGTCGGGTAGGCTaGGGTGGGAAACCTAATTAT +
Preference number: 2 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWVSRVG*GGKPNY
Trigger: ATAATTAGGTTTCCCACCCCAGCCTACCCGACTTAC...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAGTAAGTCGGGTAGGCTaGGGTGGGAAACCTAATTAT +
Preference number: 2 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLVSRVG*GGKPNY
Trigger: ATAATTAGGTTTCCCACCCCAGCCTACCCGACTTAC...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CAA 90 bp GAGGAGGTCTTTCAGTCCTGGCAGCCTATTGACGAGCCATGTCAGTaGCTTTTTAGAGATGTTGGTCCAACTGAGGTCAAGGCTGACTGG +
Preference number: 2 (lower is better)
Translates to: EEVFQSWQPIDEPCQ*LFRDVGPTEVKADW
Trigger: CCAGTCAGCCTTGACCTCAGTTGGACCAACATCTCTAAAAAGCAACTGACATGGCTCGTCAATAGGCTGCCAGGACTGAAAGACCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR TCA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTGAAGGTCGATCAAGGTaGCGTTGGCAATGCGCCGTA +
Preference number: 2 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPEGRSR*RWQCAV
Trigger: TACGGCGCATTGCCAACGTCACCTTGATCGACCTTC...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR GCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCTCAAGGCTGACTGGCTaGCTCTTGATGATGCCACTG +
Preference number: 2 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTSRLTG*LLMMPL
Trigger: CAGTGGCATCATCAAGAGGCAGCCAGTCAGCCTTGA...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR GCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAACTCCCTCTGAGGACGTaGATCCTGGGAAAGCCTTCT +
Preference number: 2 (lower is better)
Translates to: HMDQPSPLKTISPHSPKELPLRT*ILGKPS
Trigger: AGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAG...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCGAGGTCTTTCAGTCCTaGCAGCCTATTGACGAGCCA +
Preference number: 2 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTEVFQS*QPIDEP
Trigger: TGGCTCGTCAATAGGCTGCCAGGACTGAAAGACCTC...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR TCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAACGCAGGCTTTTCGAGTaGTCTGCTTGCATCCTCGAA +
Preference number: 2 (lower is better)
Translates to: NYVNKHECWAEPSSRERKRRLFE*SACILE
Trigger: TTCGAGGATGCAAGCAGATCACTCGAAAAGCCTGCG...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR GCA 90 bp GCTGGGTGTGTCTTAGCTGATCTTCTGTATCAGCTTCTCGTCAGACAGGCAGTAGTCCTTGATTCCTACTaGCCACCGAAGATCAAGGGT +
Preference number: 2 (lower is better)
Translates to: AGCVLADLLYQLLVRQAVVLDSY*PPKIKG
Trigger: ACCCTTGATCTTCGGTGGGCAGTAGGAATCAAGGAC...TACTGCCTGTCTGACGAGAAGCTGATACAGAAGATCAGCTAAGACACACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR GCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCGTGCAAAAAGCTCTCTaGTGCCCTAGAGAGAGGATC +
Preference number: 2 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTVQKAL*CPRERI
Trigger: GATCCTCTCTCTAGGGCAGCAGAGAGCTTTTTGCAC...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATATGGGACTCCTGGGGCTaGTGGCCCCTCCTGCGCAAG +
Preference number: 2 (lower is better)
Translates to: SNQRKRQEASNYRSLTIIWDSWG*WPLLRK
Trigger: CTTGCGCAGGAGGGGCCAGCAGCCCCAGGAGTCCCA...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTTCAACCCCAGATTATTaGGGCCTGGAGACCAATGGA +
Preference number: 2 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPSTPDY*GLETNG
Trigger: TCCATTGGTCTCCAGGCCCCAATAATCTGGGGTTGA...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAAAGTCTGAGATGAAGTaGTCGCAGGCTTTTCGAGTG +
Preference number: 2 (lower is better)
Translates to: NYVNKHECWAEPSSRERKKSEMK*SQAFRV
Trigger: CACTCGAAAAGCCTGCGAGCACTTCATCTCAGACTT...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR GCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAACCCCTCAGATCAATCTaGTACTCCCTTTTCCTTAGG +
Preference number: 2 (lower is better)
Translates to: HMDQPSPLKTISPHSPKEPLRSI*YSLFLR
Trigger: CCTAAGGAAAAGGGAGTAGCAGATTGATCTGAGGGG...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp ATTACACAAATATCACCCATTCCCACGTGTCAGAGGAAAGATGTCCTTGCTCTCTGGAAGTGGCAAGGGTaGAGTTGGCGTCTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: ITQISPIPTCQRKDVLALWKWQG*SWRLSS
Trigger: AGAAGAGAGACGCCAACTGCACCCTTGCCACTTCCA...GAGAGCAAGGACATCTTTCCTCTGACACGTGGGAATGGGTGATATTTGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529006.7
3UTR-3UTR GCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCAGAGGGGGAGCAGAGTaGAAATTTGCATCAATCATT +
Preference number: 2 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTRGGAE*KFASII
Trigger: AATGATTGATGCAAATTTGCACTCTGCTCCCCCTCT...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACGTCTCAGAATCCACTTaGGTAGCAACGAAATGGGTG +
Preference number: 2 (lower is better)
Translates to: QSFISSCHRLLLLSISSHVSEST*VATKWV
Trigger: CACCCATTTCGTTGCTACCCAAGTGGATTCTGAGAC...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CAA 90 bp GGTTGTGCTATCAGTATCCTTACAGAGGGGGAGCAGAGTGCAAATTaGCATCAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTG +
Preference number: 2 (lower is better)
Translates to: GCAISILTEGEQSAN*HQSFISSCHRLLLL
Trigger: CAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATACTGATAGCACAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR TCA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTGGAAATTTCTGTGGATaGAATGTCCCAAAGTCAGAG +
Preference number: 2 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPGNFCG*NVPKSE
Trigger: CTCTGACTTTGGGACATTTCATCCACAGAAATTTCC...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCCAATTTATTGCAACCTaGCATATTGAGCTCTGTGAG +
Preference number: 2 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTQFIAT*HIELCE
Trigger: CTCACAGAGCTCAATATGGCAGGTTGCAATAAATTG...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR CCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATAAGAGGCTCTCCTCGGTaGGGAGTCAGGGGAAGATCG +
Preference number: 2 (lower is better)
Translates to: SNQRKRQEASNYRSLTIIRGSPR*GVRGRS
Trigger: CGATCTTCCCCTGACTCCCCACCGAGGAGAGCCTCT...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR GCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATACGACAGCACAGCCTGTaGTTTCCCCTCAGATCAATC +
Preference number: 2 (lower is better)
Translates to: SNQRKRQEASNYRSLTIIRQHSL*FPLRSI
Trigger: GATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCG...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR TCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATAGAATTTGAGGGTCCTTaGTTCCTACTGCCCACCGAA +
Preference number: 2 (lower is better)
Translates to: SNQRKRQEASNYRSLTIIEFEGP*FLLPTE
Trigger: TTCGGTGGGCAGTAGGAATCAAGGACCCTCAAATTC...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR CCA 72 bp GGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTaGAGGAGCCTGGCTGGGAGGCAGGTTGGGGCTTGG +
Preference number: 3 (lower is better)
Translates to: GLGSGGSAKPEA*RSLAGRQVGAW
Trigger: CCAAGCCCCAACCTGCCTCCCAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR CCA 72 bp GTTGCACAAACACCCCAAACTGAGAGCCCGGCCTCCTaGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCA +
Preference number: 3 (lower is better)
Translates to: VAQTPQTESPAS*QASKRAGASTA
Trigger: TGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCTCAGTTTGGGGTGTTTGTGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR CAA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGAAGATCGGTTTCCTGTaGAATCTGGGCTGGGTGTGT +
Preference number: 3 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLKIGFL*NLGWVC
Trigger: ACACACCCAGCCCAGATTCAACAGGAAACCGATCTT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR TCA 72 bp GGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTaGTCGGCACGGGTCTGGGACTCCTGGGGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: GREVWEISTAPV*SARVWDSWGCW
Trigger: CCAGCAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR CAA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCTCTGCCGCCTCCAGCTaGGGGGAGATAGGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCSAASS*GEIGCS
Trigger: GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGA...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CCA 72 bp ATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTaGCCATGGAGACAGGGCCGTTTTCTTCCCTGGGAG +
Preference number: 3 (lower is better)
Translates to: MEERRALDTTRT*PWRQGRFLPWE
Trigger: CTCCCAGGGAAGAAAACGGCCCTGTCTCCATGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR-3UTR CAA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTAAGATCGGTTTCCTGTaGAATCTGGGCTGGGTGTGT +
Preference number: 3 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFKIGFL*NLGWVC
Trigger: ACACACCCAGCCCAGATTCAACAGGAAACCGATCTT...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR GCA 72 bp CTGGCAAGGCCGTGTCTAAGAGCAGATTGTAGGACATaGGATGGACTCCCCAGGTTCCTCTGTCCCCCAACA +
Preference number: 3 (lower is better)
Translates to: LARPCLRADCRT*DGLPRFLCPPT
Trigger: TGTTGGGGGACAGAGGAACCTGGGGAGTCCATCGCATGTCCTACAATCTGCTCTTAGACACGGCCTTGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CAA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGTGCTTTTTAGAGATGTaGGTCCAACTGAGGTCAAGG +
Preference number: 3 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLCFLEM*VQLRSR
Trigger: CCTTGACCTCAGTTGGACCAACATCTCTAAAAAGCA...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR CAA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGTTCTTCCCTGGGAGTTaGCTCAGAACCAGGCACTGC +
Preference number: 3 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWFFPGS*LRTRHC
Trigger: GCAGTGCCTGGTTCTGAGCAAACTCCCAGGGAAGAA...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CAA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCATTCTTCCCTGGGAGTTaGCTCAGAACCAGGCACTGC +
Preference number: 3 (lower is better)
Translates to: WPRWQRGDHSASIALEVAFFPGS*LRTRHC
Trigger: GCAGTGCCTGGTTCTGAGCAAACTCCCAGGGAAGAA...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CCA 72 bp GTGCCTGTCTCAGAATCCACTTGGGTAGCAACGAAATaGGTGTGTCCCTGGGGTAGACAGTTCCAGCTCCTC +
Preference number: 3 (lower is better)
Translates to: VPVSESTWVATK*VCPWGRQFQLL
Trigger: GAGGAGCTGGAACTGTCTACCCCAGGGACACACCCATTTCGTTGCTACCCAAGTGGATTCTGAGACAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR CCA 72 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTaGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: GGKEGTTLPLLL*KWQGCSWRLSS
Trigger: AGAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR GCA 72 bp AAGCAAGTCCCGAATTTGAGGGTCCTTGATTCCTACTaGCCACCGAAGATCAAGGGTCCTGAGAAGGGGGCA +
Preference number: 3 (lower is better)
Translates to: KQVPNLRVLDSY*PPKIKGPEKGA
Trigger: TGCCCCCTTCTCAGGACCCTTGATCTTCGGTGGGCAGTAGGAATCAAGGACCCTCAAATTCGGGACTTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR CAA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGAAGATCGGTTTCCTGTaGAATCTGGGCTGGGTGTGT +
Preference number: 3 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWKIGFL*NLGWVC
Trigger: ACACACCCAGCCCAGATTCAACAGGAAACCGATCTT...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR TCA 72 bp TGGGTGTGTCCCTGGGGTAGACAGTTCCAGCTCCTCTaGAGAGCTTCAACCCCAATAAGTGCAATAAGGACC +
Preference number: 3 (lower is better)
Translates to: WVCPWGRQFQLL*RASTPISAIRT
Trigger: GGTCCTTATTGCACTTATTGGGGTTGAAGCTCTTCAGAGGAGCTGGAACTGTCTACCCCAGGGACACACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
3UTR GCA 72 bp ACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTaGAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTT +
Preference number: 3 (lower is better)
Translates to: TTLPLLLWKWQG*SWRLSSQWLTL
Trigger: AAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CCA 72 bp CACTGGCATTTCCTCAAAGTTTCAACCCCAGATTATTaGGGCCTGGAGACCAATGGAAGTGGGCAGAGGGTC +
Preference number: 3 (lower is better)
Translates to: HWHFLKVSTPDY*GLETNGSGQRV
Trigger: GACCCTCTGCCCACTTCCATTGGTCTCCAGGCCCCAATAATCTGGGGTTGAAACTTTGAGGAAATGCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CAA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAGACGAGCCATGTCAGTaGCTTTTTAGAGATGTTGGT +
Preference number: 3 (lower is better)
Translates to: WPRWQRGDHSASIALEVADEPCQ*LFRDVG
Trigger: ACCAACATCTCTAAAAAGCAACTGACATGGCTCGTC...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR TCA 72 bp GGTTTATCAGCCGGTGGAGTAAGCAAGTCCCGAATTTaGGGGTCCTTGATTCCTACTGCCCACCGAAGATCA +
Preference number: 3 (lower is better)
Translates to: GLSAGGVSKSRI*GSLIPTAHRRS
Trigger: TGATCTTCGGTGGGCAGTAGGAATCAAGGACCCTCAAATTCGGGACTTGCTTACTCCACCGGCTGATAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR TCA 72 bp GTCAGACAGGCAGTAGAGGCTGTTGATGGACAAGTCTaGGATGAAGTGCTCGCAGGCTTTTCGAGTGATCTG +
Preference number: 3 (lower is better)
Translates to: VRQAVEAVDGQV*DEVLAGFSSDL
Trigger: CAGATCACTCGAAAAGCCTGCGAGCACTTCATCTCAGACTTGTCCATCAACAGCCTCTACTGCCTGTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR GCA 72 bp TCTGAGATGAAGTGCTCGCAGGCTTTTCGAGTGATCTaGTTGCATCCTCGAAGGTCGATCAAGGTGACGTTG +
Preference number: 3 (lower is better)
Translates to: SEMKCSQAFRVI*LHPRRSIKVTL
Trigger: CAACGTCACCTTGATCGACCTTCGAGGATGCAAGCAGATCACTCGAAAAGCCTGCGAGCACTTCATCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR CCA 72 bp CTTGCTGCGATTGTCCTGACCTGGTTTATCAGCCGGTaGAGTAAGCAAGTCCCGAATTTGAGGGTCCTTGAT +
Preference number: 3 (lower is better)
Translates to: LAAIVLTWFISR*SKQVPNLRVLD
Trigger: ATCAAGGACCCTCAAATTCGGGACTTGCTTACTCCACCGGCTGATAAACCAGGTCAGGACAATCGCAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR CAA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCATGGTCTGTCAATTTATaGCAACCTGCCATATTGAGC +
Preference number: 3 (lower is better)
Translates to: WPRWQRGDHSASIALEVAWSVNL*QPAILS
Trigger: GCTCAATATGGCAGGTTGCAATAAATTGACAGACCA...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR CAA 90 bp GCTGGGTGTGTCTTAGCTGATCTTCTGTATCAGCTTCTCGTCAGACAGGCAGTATTTCGAGTGATCTGCTaGCATCCTCGAAGGTCGATC +
Preference number: 3 (lower is better)
Translates to: AGCVLADLLYQLLVRQAVFRVIC*HPRRSI
Trigger: GATCGACCTTCGAGGATGCAAGCAGATCACTCGAAA...TACTGCCTGTCTGACGAGAAGCTGATACAGAAGATCAGCTAAGACACACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR TCA 72 bp GGTTTCCTGTTGAATCTGGGCTGGGTGTGTCTTAGCTaGTCTTCTGTATCAGCTTCTCGTCAGACAGGCAGT +
Preference number: 3 (lower is better)
Translates to: GFLLNLGWVCLS*SSVSASRQTGS
Trigger: ACTGCCTGTCTGACGAGAAGCTGATACAGAAGATCAGCTAAGACACACCCAGCCCAGATTCAACAGGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR CAA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCTGTCTCAGAATCCACTaGGGTAGCAACGAAATGGGT +
Preference number: 3 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTCLRIH*GSNEMG
Trigger: ACCCATTTCGTTGCTACCCAAGTGGATTCTGAGACA...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR GCA 72 bp TTCAGTCCTGGCAGCCTATTGACGAGCCATGTCAGTTaGTTTTTAGAGATGTTGGTCCAACTGAGGTCAAGG +
Preference number: 3 (lower is better)
Translates to: FSPGSLLTSHVS*FLEMLVQLRSR
Trigger: CCTTGACCTCAGTTGGACCAACATCTCTAAAAAGCAACTGACATGGCTCGTCAATAGGCTGCCAGGACTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR CAA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAGAGCAGAGTGCAAATTaGCATCAATCATTTATAAGC +
Preference number: 3 (lower is better)
Translates to: WPRWQRGDHSASIALEVAEQSAN*HQSFIS
Trigger: GCTTATAAATGATTGATGCAAATTTGCACTCTGCTC...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CAA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCAGTCCTGGCAGCCTATaGACGAGCCATGTCAGTTGC +
Preference number: 3 (lower is better)
Translates to: YPYRGGAECKFASIIYKLSPGSL*TSHVSC
Trigger: GCAACTGACATGGCTCGTCAATAGGCTGCCAGGACT...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR-3UTR CAA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTACCCAAAAGAAACCATaGGCTTGGAAATTTCTGTGG +
Preference number: 3 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPTQKKP*AWKFLW
Trigger: CCACAGAAATTTCCAAGCCAATGGTTTCTTTTGGGT...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR-3UTR CAA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCGAGCAGAGTGCAAATTaGCATCAATCATTTATAAGC +
Preference number: 3 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTEQSAN*HQSFIS
Trigger: GCTTATAAATGATTGATGCAAATTTGCACTCTGCTC...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CCA 72 bp GTTCTTTACAGAGAAGTTCCCCTAACTGAGGCACTCTaGAATAAGTCACTGGCATTTCCTCAAAGTTTCAAC +
Preference number: 3 (lower is better)
Translates to: VLYREVPLTEAL*NKSLAFPQSFN
Trigger: GTTGAAACTTTGAGGAAATGCCAGTGACTTATTCCAGAGTGCCTCAGTTAGGGGAACTTCTCTGTAAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCCGCCGCCGCCGCCGCTaGCGGGGAGGGGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSRRRRR*RGGVLF
Trigger: AAACAACACCCCTCCCCGGCAGCGGCGGCGGCGGCG...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGTCGGCCAGCAGGGGCTaGTCGCCTGCGGGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLSASRG*SPAGAA
Trigger: CGCTGCTCCCGCAGGCGACCAGCCCCTGCTGGCCGA...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGCGGCTGGCACTGTGGTaGTCGCTGGGGCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLRLALW*SLGPAP
Trigger: TGGGGCTGGCCCCAGCGACCACCACAGTGCCAGCCG...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGCACTGTGGTGGTCGCTaGGGCCAGCCCCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLHCGGR*GQPQGM
Trigger: CATCCCCTGGGGCTGGCCCCAGCGACCACCACAGTG...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTCGCGGCTGGCACTGTaGTGGTCGCTGGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGSRLAL*WSLGPA
Trigger: GGCTGGCCCCAGCGACCACCACAGTGCCAGCCGCGA...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCGCTGCTGGCCCCTCCTaGGCAAGCCGGGAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSAAGPS*ASRESV
Trigger: CACACTCTCCCGGCTTGCGCAGGAGGGGCCAGCAGC...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGGGACTCCTGGGGCTaGTGGCCCCTCCTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGWDSWG*WPLLRK
Trigger: CTTGCGCAGGAGGGGCCAGCAGCCCCAGGAGTCCCA...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCACTGTGGTGGTCGCTaGGGCCAGCCCCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGHCGGR*GQPQGM
Trigger: CATCCCCTGGGGCTGGCCCCAGCGACCACCACAGTG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGTCTCCGTCTGGCTCCTaGCACAATCGGGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLSPSGS*HNRGGS
Trigger: GCTGCCTCCCCGATTGTGTCAGGAGCCAGACGGAGA...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGATGGAAGTGGGTGAATaGGGCGGGGGCGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLMEVGE*GGGVRG
Trigger: GCCTCTCACGCCCCCGCCTCATTCACCCACTTCCAT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGCTTTCGTCTCCATCCTaGGCCCAACTGCCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLLSSPS*AQLPRP
Trigger: TGGCCGGGGCAGTTGGGCTCAGGATGGAGACGAAAG...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCTTGGCCCAGTCCTCTaGCGCCTCCAGCTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGLGPVL*RLQLGG
Trigger: TCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCCTTGGCCCAGTCCTCTaGCGCCTCCAGCTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSLGPVL*RLQLGG
Trigger: TCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAG...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGACCCCCTTCCATGGCTaGAGGCAGAGGGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLTPFHG*RQRAGD
Trigger: GTCACCAGCCCTCTGCCTGCAGCCATGGAAGGGGGT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCAGCGCTCATCGCGGCTaGCACTGTGGTGGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSSAHRG*HCGGRW
Trigger: CCAGCGACCACCACAGTGCCAGCCGCGATGAGCGCT...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCTCTCCCCCTCAGGTCTaGCTCCGCGCTGCGGGACGA +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPSPPQV*LRAAGR
Trigger: TCGTCCCGCAGCGCGGAGCCAGACCTGAGGGGGAGA...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCCTGGAGGAGCCTGGCTaGGAGGCAGGTTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSLEEPG*EAGWGL
Trigger: CAAGCCCCAACCTGCCTCCCAGCCAGGCTCCTCCAG...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGGCTAAACCAGAGGCCTaGAGGAGCCTGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLAKPEA*RSLAGR
Trigger: CCTCCCAGCCAGGCTCCTCCAGGCCTCTGGTTTAGC...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCCAGCGTGCAGCGCTCTaGGCTCCTTCTCGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSQRAAL*APSRAL
Trigger: AAGGGCTCGAGAAGGAGCCCAGAGCGCTGCACGCTG...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR TCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGACAAACACCCCAAACTaGGAGCCCGGCCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLTNTPN*EPGLLA
Trigger: TGCCAGGAGGCCGGGCTCTCAGTTTGGGGTGTTTGT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCGGAGGACACAGGACTaGTTCATGCGTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGRRTQD*FMRPGP
Trigger: GGGGCCTGGACGCATGAAGCAGTCCTGTGTCCTCCG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGTCGCGGCTGGCACTGTaGTGGTCGCTGGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLSRLAL*WSLGPA
Trigger: GGCTGGCCCCAGCGACCACCACAGTGCCAGCCGCGA...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCAGCGCTCATCGCGGCTaGCACTGTGGTGGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPSAHRG*HCGGRW
Trigger: CCAGCGACCACCACAGTGCCAGCCGCGATGAGCGCT...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGCTTGTCGCAGCACCATaGTGCGCTCTGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLLVAAP*CALWPA
Trigger: TGCAGGCCACAGAGCGCACCATGGTGCTGCGACAAG...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR CCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCAGAACCAGGCACTGCTaGGGACCATGGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSRTRHC*GPWMGR
Trigger: CCTCCCCATCCATGGTCCCCAGCAGTGCCTGGTTCT...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGGAGGGAACATGTGACTaGGTGAGGCAGTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLEGTCD*VRQSGC
Trigger: GCACCCAGACTGCCTCACTCAGTCACATGTTCCCTC...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCGTAAGGTGGCTGCAGTaGCTGAGGTCGAGTCGAGAC +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSVRWLQ*LRSSRD
Trigger: GTCTCGACTCGACCTCAGTCACTGCAGCCACCTTAC...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTCAGCGGCCGATCAGCTaGGACCGGCCGGCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLQRPIS*DRPARG
Trigger: GCCTCGGGCCGGCCGGTCTCAGCTGATCGGCCGCTG...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCATAGGCTGCTCCCTCTaGGGACGTGCATCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSIGCSL*GRASWE
Trigger: TTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTAT...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGCAGCCGCTGGGAAGGTaGTCCGAGAGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGQPLGR*SESRRR
Trigger: GCGGCGGCGGCTCTCGGAGCACCTTCCCAGCGGCTG...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCCTCAGAACCAGGCACTaGTGGGGACCATGGATGGGG +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSLRTRH*WGPWMG
Trigger: CCCCATCCATGGTCCCCAGCAGTGCCTGGTTCTGAG...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCGGGGCCGCAGGACTTTaGCTTGCACAGCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSGAAGL*LAQLLR
Trigger: ACGAAGAAGCTGTGCAAGCCAAAGTCCTGCGGCCCC...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGATGCCACTGAGGGCCTaGGGCACAATGGCCTTACAC +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLMPLRA*GTMALH
Trigger: GTGTAAGGCCATTGTGCCCCAGGCCCTCAGTGGCAT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCAGAGGCTCTCCTCGGTaGGGAGTCAGGGGAAGATCG +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSRGSPR*GVRGRS
Trigger: CGATCTTCCCCTGACTCCCCACCGAGGAGAGCCTCT...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGAGGCCTGGAGGAGCCTaGCTGGGAGGCAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLRPGGA*LGGRLG
Trigger: CCCCAACCTGCCTCCCAGCCAGGCTCCTCCAGGCCT...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCAGAGGGCTGGTGACTaGCTTCTAAGCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGQRAGD*LLSRTP
Trigger: GGGGGTCCTGCTTAGAAGCCAGTCACCAGCCCTCTG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCCTCAACAAAGGGCGGTaGAGCGGGAGACACCATGCT +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSLNKGR*SGRHHA
Trigger: AGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAG...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGAATGAGGCGGGGGCGTaGGAGGCTCATCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLNEAGA*EAHRSS
Trigger: GGAGCTGCGATGAGCCTCTCACGCCCCCGCCTCATT...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCGTCCTGGCAGCCTATTaGCGAGCCATGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSVLAAY*RAMSVA
Trigger: AGCAACTGACATGGCTCGTCAATAGGCTGCCAGGAC...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCAGGGCCCAGTGCAGATaGAGGTTGCACAAACACCCC +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGRAQCR*RLHKHP
Trigger: GGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCT...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCGCCCTGAAAGTTCAGTaGGCCACTGGGGCTAGACAC +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGALKVQ*ATGARH
Trigger: GTGTCTAGCCCCAGTGGCTCACTGAACTTTCAGGGC...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCGGACAGAACGCCTGCTaGTCAAGCGTCGGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPGQNAC*SSVGVL
Trigger: GAGAACCCCGACGCTTGAGCAGCAGGCGTTCTGTCC...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAGTGCGCTCTGTGGCCTaGAGCCGCAGCAACTGCCGC +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPVRSVA*SRSNCR
Trigger: GCGGCAGTTGCTGCGGCTGCAGGCCACAGAGCGCAC...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCTTTCCCGTACCATGGTaGGCTCTGTGGCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPFPVPW*ALWPAA
Trigger: GGCTGCAGGCCACAGAGCGCACCATGGTACGGGAAA...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAGCTGCTGGCCCCTCCTaGGCAAGCCGGGAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPAAGPS*ASRESV
Trigger: CACACTCTCCCGGCTTGCGCAGGAGGGGCCAGCAGC...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCAGGGCATGGTCCATCTaGTGCCTTTTCTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSRAWSI*CLFWAP
Trigger: GGGAGCCCAGAAAAGGCAGCAGATGGACCATGCCCT...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCGGTTTTTCGCCCCGGTaGTTGGAAAGATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSGFSPR*LERWRQ
Trigger: CTGCCTCCATCTTTCCAAGCACCGGGGCGAAAAACC...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGCCAGAGGGAGCAGCGTaGAGCGCTCTGGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLPEGAA*SALGSF
Trigger: GAAGGAGCCCAGAGCGCTGCACGCTGCTCCCTCTGG...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR CCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCTGAGTGAGGCAGTCTaGGTGCCAAGCACTGTCGGA +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGLSEAV*VPSTVG
Trigger: TCCGACAGTGCTTGGCACCCAGACTGCCTCACTCAG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCAGGAGAGACGCGCACTaGACACCACAAGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSRRDAH*TPQEPG
Trigger: GCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCT...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGGGCTGGGAGGCAGGTTaGGGCTTGGCCCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLGWEAG*GLAQSS
Trigger: AGAGGACTGGGCCAAGCCCCAACCTGCCTCCCAGCC...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTAGGCCTGGAGGAGCCTaGCTGGGAGGCAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFRPGGA*LGGRLG
Trigger: CCCCAACCTGCCTCCCAGCCAGGCTCCTCCAGGCCT...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCTCAACAAAGGGCGGTaGAGCGGGAGACACCATGCT +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGLNKGR*SGRHHA
Trigger: AGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGTGGCAAGGGTGCAGTTaGCGTCTCTCTTCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLWQGCS*RLSSQW
Trigger: CCACTGAGAAGAGAGACGCCAACTGCACCCTTGCCA...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCCGGTGCTTGGAAAGATaGAGGCAGGGGTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSRCLER*RQGFWS
Trigger: GGACCAGAACCCCTGCCTCCATCTTTCCAAGCACCG...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCAAACCGGGTCATGGATaGGCTGCAGCATGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGKPGHG*AAAWKW
Trigger: CCACTTCCATGCTGCAGCTCATCCATGACCCGGTTT...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCATGGCAGAGGAGGCCGTaGTGGCCTGCAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPWQRRP*WPAAWA
Trigger: TGCCCAAGCTGCAGGCCATCACGGCCTCCTCTGCCA...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGAAAGTTCTCTGCGGCTaGGGTAGCGGAAGACAGACA +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLKVLCG*GSGRQT
Trigger: TGTCTGTCTTCCGCTACCTCAGCCGCAGAGAACTTT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCGTCCTGGCAGCCTATTaGCGAGCCATGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGVLAAY*RAMSVA
Trigger: AGCAACTGACATGGCTCGTCAATAGGCTGCCAGGAC...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCGAAGGTCGATCAAGGTaGCGTTGGCAATGCGCCGTA +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGEGRSR*RWQCAV
Trigger: TACGGCGCATTGCCAACGTCACCTTGATCGACCTTC...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCCAGCGGCCGATCAGCTaGGACCGGCCGGCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: HSASIALEVARVQLASLFQRPIS*DRPARG
Trigger: GCCTCGGGCCGGCCGGTCTCAGCTGATCGGCCGCTG...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCAGATCGGTTTCCTGTTaGATCTGGGCTGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSRSVSC*IWAGCV
Trigger: GACACACCCAGCCCAGATTCAACAGGAAACCGATCT...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCGCCCTGAAAGTTCAGTaGGCCACTGGGGCTAGACAC +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPALKVQ*ATGARH
Trigger: GTGTCTAGCCCCAGTGGCTCACTGAACTTTCAGGGC...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCCTCCCTCTGAGGACGTaGATCCTGGGAAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSLPLRT*ILGKPS
Trigger: AGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAG...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCGGACAGGCCGTTCAATaGAAAGTAAAAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSGQAVQ*KVKGGS
Trigger: GCTGCCCCCTTTTACTTTGCATTGAACGGCCTGTCC...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCGCCTGCGAACAATGCTaGTGCGTCACCCACATGCAG +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPACEQC*CVTHMQ
Trigger: CTGCATGTGGGTGACGCAGCAGCATTGTTCGCAGGC...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR CCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCACACTTGTCCATTGTaGGAGCCCCGGCTACAGTCA +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGHTCPL*EPRLQS
Trigger: TGACTGTAGCCGGGGCTCCCACAATGGACAAGTGTG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGTCCATTTTCCGCTTCTaGGCTTTCTCCGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLSIFRF*AFSELS
Trigger: GGACAGCTCGGAGAAAGCCCAGAAGCGGAAAATGGA...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTCGGCTGGCACTGTGGTaGTCGCTGGGGCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLRLALW*SLGPAP
Trigger: TGGGGCTGGCCCCAGCGACCACCACAGTGCCAGCCG...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCCCTTTTCCCGTACCATaGTGCGCTCTGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPPFPVP*CALWPA
Trigger: TGCAGGCCACAGAGCGCACCATGGTACGGGAAAAGG...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGGAGGTCTTTCAGTCCTaGCAGCCTATTGACGAGCCA +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLEVFQS*QPIDEP
Trigger: TGGCTCGTCAATAGGCTGCCAGGACTGAAAGACCTC...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGGCGATTGTCCTGACCTaGTTTATCAGCCGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLAIVLT*FISRWS
Trigger: ACTCCACCGGCTGATAAACCAGGTCAGGACAATCGC...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGGGATTCCGGGGGATaGGCCCCCTGGCGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCRDSGG*APWRCP
Trigger: GGGGCAACGCCAGGGGGCCCATCCCCCGGAATCCCT...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCAGGAGAGACGCGCACTaGACACCACAAGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPRRDAH*TPQEPG
Trigger: GCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCT...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCAGGCCTGGAGGAGCCTaGCTGGGAGGCAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGRPGGA*LGGRLG
Trigger: CCCCAACCTGCCTCCCAGCCAGGCTCCTCCAGGCCT...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCCACACTTTAGACCCCTaGTGCCTGGGCTCCATTCCC +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPHTLDP*CLGSIP
Trigger: GGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTG...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCTTTCGCCCCGGTGCTTaGAAAGATGGAGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPFRPGA*KDGGRG
Trigger: ACCCCTGCCTCCATCTTTCCAAGCACCGGGGCGAAA...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGTTGAGCTCAATGCGCTaGCAATCTGATACCCGGTCA +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLLSSMR*QSDTRS
Trigger: TGACCGGGTATCAGATTGTCAGCGCATTGAGCTCAA...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCCATCATAATCCAGGTTaGCTCCATTCGCTACAGGGC +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSHHNPG*LHSLQG
Trigger: GCCCTGTAGCGAATGGAGTCAACCTGGATTATGATG...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGAATGAGGCGGGGGCGTaGGAGGCTCATCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGNEAGA*EAHRSS
Trigger: GGAGCTGCGATGAGCCTCTCACGCCCCCGCCTCATT...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAATGGAAGTGGGTGAATaGGGCGGGGGCGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPMEVGE*GGGVRG
Trigger: GCCTCTCACGCCCCCGCCTCATTCACCCACTTCCAT...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCACTTTCGTCTCCATCCTaGGCCCAACTGCCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPLSSPS*AQLPRP
Trigger: TGGCCGGGGCAGTTGGGCTCAGGATGGAGACGAAAG...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGGAAGATCAAGGGTCCTaGGAAGGGGGCAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLEDQGS*EGGSWR
Trigger: CCTCCAGCTGCCCCCTTCTCAGGACCCTTGATCTTC...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGGAAGCGTGGCATCTGTaGTGTCAAGGCCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLEAWHL*CQGLPA
Trigger: GGCTGGCAGGCCTTGACATCACAGATGCCACGCTTC...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCAGTAGATTGGAGGACTaGTCTGTAAGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSSRLED*SVRWLQ
Trigger: CTGCAGCCACCTTACAGATCAGTCCTCCAATCTACT...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCGCAGGCTTTTCGAGTaGTCTGCTTGCATCCTCGAA +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGRRLFE*SACILE
Trigger: TTCGAGGATGCAAGCAGATCACTCGAAAAGCCTGCG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGATAGGCTGCTGCTACTaGGCATCTCCTCACACACTT +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLIGCCY*ASPHTL
Trigger: AAGTGTGTGAGGAGATGCTCAGTAGCAGCAGCCTAT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGGTGAGGCAGTCTGGGTaGCAAGCACTGTCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLVRQSG*QALSED
Trigger: GTCCTCCGACAGTGCTTGGCACCCAGACTGCCTCAC...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCGCAGGACTTTGGCTTaGACAGCTTCTTCGTCACTC +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGRRTLA*TASSSL
Trigger: GAGTGACGAAGAAGCTGTGCAAGCCAAAGTCCTGCG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCCAGACAGCTCCTTTTTaGCGCTGGGATTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSQTAPF*RWDCSP
Trigger: AGGAGAACAATCCCAGCGGCAAAAAGGAGCTGTCTG...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGGTTCGGGCTGGGCAGTaGTGCACTAGCACACGGGGG +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPVRAGQ*CTSTRG
Trigger: CCCCCGTGTGCTAGTGCAGCACTGCCCAGCCCGAAC...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGGCTTTTCGAGTGATCTaGTTGCATCCTCGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLAFRVI*LHPRRS
Trigger: CGACCTTCGAGGATGCAAGCAGATCACTCGAAAAGC...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GTGCTCGCAGGCTTTTCGAGTGATCTGCTTGCATCCTCGAAGGTCGATCAAGGTTGGGCCCCCTGGCGTTaGCCCTCCTCCCGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: VLAGFSSDLLASSKVDQGWAPWR*PSSRSV
Trigger: GACGCTCCGGGAGGAGGGGCAACGCCAGGGGGCCCA...ACCTTGATCGACCTTCGAGGATGCAAGCAGATCACTCGAAAAGCCTGCGAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR GCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGGTGCAAAAAGCTCTCTaGTGCCCTAGAGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLVQKAL*CPRERI
Trigger: GATCCTCTCTCTAGGGCAGCAGAGAGCTTTTTGCAC...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCTGGAAGTGGCAAGGGTaGAGTTGGCGTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSWKWQG*SWRLSS
Trigger: AGAAGAGAGACGCCAACTGCACCCTTGCCACTTCCA...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCTGTGCCTGCGAACAATaGTGCTGCGTCACCCACATG +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPCACEQ*CCVTHM
Trigger: CATGTGGGTGACGCAGCAGCATTGTTCGCAGGCACA...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR CCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCCACTGTGGTGGTCGCTaGGGCCAGCCCCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCHCGGR*GQPQGM
Trigger: CATCCCCTGGGGCTGGCCCCAGCGACCACCACAGTG...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTACGGCTGGCACTGTGGTaGTCGCTGGGGCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLRLALW*SLGPAP
Trigger: TGGGGCTGGCCCCAGCGACCACCACAGTGCCAGCCG...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCGCAGCTTGGGCACAATaGATGTCCCGTGGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPAAWAQ*MSRGAL
Trigger: AAGAGCTCCACGGGACATCCATTGTGCCCAAGCTGC...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCGGGCCTGGGGCACAATaGCCTTACACCTACTCAAGT +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPGPGAQ*PYTYSS
Trigger: ACTTGAGTAGGTGTAAGGCCATTGTGCCCCAGGCCC...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCGCGATTGTCCTGACCTaGTTTATCAGCCGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGAIVLT*FISRWS
Trigger: ACTCCACCGGCTGATAAACCAGGTCAGGACAATCGC...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGACACGGGCCCAGCCGCTaGGAAGGTGCTCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LQEEESLRLGYRKRARKGHGPSR*EGAPRA
Trigger: GGCTCTCGGAGCACCTTCCCAGCGGCTGGGCCCGTG...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCTCTCCCCCTCAGGTCTaGCTCCGCGCTGCGGGACGA +
Preference number: 4 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCSPPQV*LRAAGR
Trigger: TCGTCCCGCAGCGCGGAGCCAGACCTGAGGGGGAGA...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCAAATGGGTGTGTCCCTaGGGTAGACAGTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSKWVCP*GRQFQL
Trigger: GAGCTGGAACTGTCTACCCCAGGGACACACCCATTT...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCAGCATGAATCCAGCCTaGGGGAATGACGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSSMNPA*GNDEGI
Trigger: TATACCTTCGTCATTCCCTCAGGCTGGATTCATGCT...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCGCTGGTTTCATAGTGTaGGGCTTCGTAATGGGGATG +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGAGFIV*GFVMGM
Trigger: CATCCCCATTACGAAGCCTCACACTATGAAACCAGC...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGTCTCCGTCTGGCTCCTaGCACAATCGGGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGSPSGS*HNRGGS
Trigger: GCTGCCTCCCCGATTGTGTCAGGAGCCAGACGGAGA...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTGCAACTGCCGCCGTTTaGAGCGCTCATCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLATAAV*SAHRGW
Trigger: CCAGCCGCGATGAGCGCTTCAAACGGCGGCAGTTGC...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGGCAACTGCCGCCGTTTaGAGCGCTCATCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWATAAV*SAHRGW
Trigger: CCAGCCGCGATGAGCGCTTCAAACGGCGGCAGTTGC...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCGAATTTGAGGGTCCTTaGTTCCTACTGCCCACCGAA +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGEFEGP*FLLPTE
Trigger: TTCGGTGGGCAGTAGGAATCAAGGACCCTCAAATTC...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGCACAGGAGGAGCCGCTaGAGCAGCCGCCGCCATTTT +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPHRRSR*SSRRHF
Trigger: AAAATGGCGGCGGCTGCTTCAGCGGCTCCTCCTGTG...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGAGGGCCCAGTGCAGATaGAGGTTGCACAAACACCCC +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLRAQCR*RLHKHP
Trigger: GGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCT...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGGGAAACCTAATTATGTaGACAAGCACGAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLGNLIM*TSTSAG
Trigger: CCCAGCACTCGTGCTTGTTCACATAATTAGGTTTCC...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCATGCAGCCGCAGCAACTaGCGCCGTTTGAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPCSRSN*RRLKRS
Trigger: TGAGCGCTTCAAACGGCGGCAGTTGCTGCGGCTGCA...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAGTGCGCTCTGTGGCCTaGAGCCGCAGCAACTGCCGC +
Preference number: 4 (lower is better)
Translates to: WPRWQRGDHSASIALEVAVRSVA*SRSNCR
Trigger: GCGGCAGTTGCTGCGGCTGCAGGCCACAGAGCGCAC...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGGAGGCCGTGATGGCCTaGAGCTTGGGCACAATGGAT +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLEAVMA*SLGTMD
Trigger: ATCCATTGTGCCCAAGCTGCAGGCCATCACGGCCTC...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCAAGTCTGAGATGAAGTaGTCGCAGGCTTTTCGAGTG +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSKSEMK*SQAFRV
Trigger: CACTCGAAAAGCCTGCGAGCACTTCATCTCAGACTT...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGGCCTCAGAGCCCGTaGAGGGTCGAGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWWPQSP*RVEERL
Trigger: GAGCCTCTCCTCGACCCTGCACGGGCTCTGAGGCCA...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTCTCAGAACCAGGCACTaGTGGGGACCATGGATGGGG +
Preference number: 4 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFLRTRH*WGPWMG
Trigger: CCCCATCCATGGTCCCCAGCAGTGCCTGGTTCTGAG...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCCTCCTGGTAGCACTTTaGACATTCCCAGCAATTTGG +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSLLVAL*TFPAIW
Trigger: CCAAATTGCTGGGAATGTCCAAAGTGCTACCAGGAG...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCTCGCGGCTGGCACTGTaGTGGTCGCTGGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: HSASIALEVARVQLASLFSRLAL*WSLGPA
Trigger: GGCTGGCCCCAGCGACCACCACAGTGCCAGCCGCGA...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCTGGTTTATCAGCCGGTaGAGTAAGCAAGTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSWFISR*SKQVPN
Trigger: ATTCGGGACTTGCTTACTCCACCGGCTGATAAACCA...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTCAAACCTTCTCTTCTaGCTTTGGAGACCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGSNLLF*LWRPGV
Trigger: GACTCCCGGTCTCCAAAGCCAGAAGAGAAGGTTTGA...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTGAGAGCCCGGCCTCCTaGCAGGCGAGTAAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLESPAS*QASKRA
Trigger: TGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCTC...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTAGAACCAGGCACTGCTaGGGACCATGGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFRTRHC*GPWMGR
Trigger: CCTCCCCATCCATGGTCCCCAGCAGTGCCTGGTTCT...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAAGAACCAGGCACTGCTaGGGACCATGGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPRTRHC*GPWMGR
Trigger: CCTCCCCATCCATGGTCCCCAGCAGTGCCTGGTTCT...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCACAAGAACCTGGCCATaGAGACAGGGCCGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGTRTWP*RQGRFL
Trigger: AAGAAAACGGCCCTGTCTCCATGGCCAGGTTCTTGT...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCGTAAGTCGGGTAGGCTaGGGTGGGAAACCTAATTAT +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSVSRVG*GGKPNY
Trigger: ATAATTAGGTTTCCCACCCCAGCCTACCCGACTTAC...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTAGGCAGGTTGGGGCTTaGCCCAGTCCTCTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLRQVGA*PSPLPP
Trigger: AGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGCCT...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGCTGGAGGAGCCTGGCTaGGAGGCAGGTTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWLEEPG*EAGWGL
Trigger: CAAGCCCCAACCTGCCTCCCAGCCAGGCTCCTCCAG...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTGAGGGAACATGTGACTaGGTGAGGCAGTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFEGTCD*VRQSGC
Trigger: GCACCCAGACTGCCTCACTCAGTCACATGTTCCCTC...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCTGTGTCTCTTCATTCTaGTCCACCTCTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPCVSSF*STSPQR
Trigger: CCTCTGTGGAGAGGTGGATCAGAATGAAGAGACACA...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGGAGGCAGCCAGGATaGACAATCTCATTGCAGATA +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGWRQPG*TISLQI
Trigger: TATCTGCAATGAGATTGTTCATCCTGGCTGCCTCCA...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCAGCAAGTCCCGAATTTaGGGGTCCTTGATTCCTACT +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSSKSRI*GSLIPT
Trigger: AGTAGGAATCAAGGACCCTCAAATTCGGGACTTGCT...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGGGTGGCTGCAGTGACTaGGGTCGAGTCGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPGGCSD*GRVETG
Trigger: TCCTGTCTCGACTCGACCTCAGTCACTGCAGCCACC...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCCGGAGATTCTGCTCTTaGGTTCTTGTCCAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSRRFCS*VLVQVR
Trigger: TCTCACTTGGACAAGAACTCAAGAGCAGAATCTCCG...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGACAAACACCCCAAACTaGGAGCCCGGCCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPTNTPN*EPGLLA
Trigger: TGCCAGGAGGCCGGGCTCTCAGTTTGGGGTGTTTGT...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTCAAGCCGGGAGAGTGTaGTGGAGGAGAGACGCGCAC +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLQAGRV*WRRDAH
Trigger: GTGCGCGTCTCTCCTCCATCACACTCTCCCGGCTTG...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGTCAACAGCACCAGTGTaGTCGGCACGGGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGSTAPV*SARVWD
Trigger: GTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGA...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCAGCACAATCCCTGCTCTaGAGGGGTCTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSAQSLL*RGLSTS
Trigger: GGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGC...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGTCTGGTCCTGCAGTCTaGGGGCAGGCTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLSGPAV*GQALLA
Trigger: TGCCAGGAGAGCCTGCCCTCAGACTGCAGGACCAGA...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCTTGCACACAGGCTTTaGATTTTCGACATCGCACTC +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGLAHRL*IFDIAL
Trigger: GAGTGCGATGTCGAAAATGCAAAGCCTGTGTGCAAG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCAGTGAGGCAGTCTGGGTaGCAAGCACTGTCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSVRQSG*QALSED
Trigger: GTCCTCCGACAGTGCTTGGCACCCAGACTGCCTCAC...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGTGCAGCCGCAGCAACTaGCGCCGTTTGAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPCSRSN*RRLKRS
Trigger: TGAGCGCTTCAAACGGCGGCAGTTGCTGCGGCTGCA...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGTTTCCCGTACCATGGTaGGCTCTGTGGCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPFPVPW*ALWPAA
Trigger: GGCTGCAGGCCACAGAGCGCACCATGGTACGGGAAA...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAGAGGCCGTGATGGCCTaGAGCTTGGGCACAATGGAT +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPEAVMA*SLGTMD
Trigger: ATCCATTGTGCCCAAGCTGCAGGCCATCACGGCCTC...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGAGTTCGGGCTGGGCAGTaGTGCACTAGCACACGGGGG +
Preference number: 4 (lower is better)
Translates to: LQEEESLRLGYRKRARKGVRAGQ*CTSTRG
Trigger: CCCCCGTGTGCTAGTGCAGCACTGCCCAGCCCGAAC...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR GCA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTTGGCCTCAGAGCCCGTaGAGGGTCGAGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSWPQSP*RVEERL
Trigger: GAGCCTCTCCTCGACCCTGCACGGGCTCTGAGGCCA...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCACTTGGGATCGCTGTTaGCAAGCTCCTCCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPTWDRC*QAPPAK
Trigger: TTTTGCTGGAGGAGCTTGCCAACAGCGATCCCAAGT...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGGCACTCGTCTCCGTCTaGCTCCTGACACAATCGGGG +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPALVSV*LLTQSG
Trigger: CCCCGATTGTGTCAGGAGCCAGACGGAGACGAGTGC...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTCTGAGTGAGGCAGTCTaGGTGCCAAGCACTGTCGGA +
Preference number: 4 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFLSEAV*VPSTVG
Trigger: TCCGACAGTGCTTGGCACCCAGACTGCCTCACTCAG...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCTCCTGGTAGCACTTTaGACATTCCCAGCAATTTGG +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGLLVAL*TFPAIW
Trigger: CCAAATTGCTGGGAATGTCCAAAGTGCTACCAGGAG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGGTTTATCAGCCGGTaGAGTAAGCAAGTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGWFISR*SKQVPN
Trigger: ATTCGGGACTTGCTTACTCCACCGGCTGATAAACCA...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAGAGAGCCCGGCCTCCTaGCAGGCGAGTAAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: WPRWQRGDHSASIALEVAESPAS*QASKRA
Trigger: TGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCTC...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGCTGGGAGGCAGGTTaGGGCTTGGCCCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSGWEAG*GLAQSS
Trigger: AGAGGACTGGGCCAAGCCCCAACCTGCCTCCCAGCC...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAGGCTGGGAGGCAGGTTaGGGCTTGGCCCAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLGWEAG*GLAQSS
Trigger: AGAGGACTGGGCCAAGCCCCAACCTGCCTCCCAGCC...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGGCTAAACCAGAGGCCTaGAGGAGCCTGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWAKPEA*RSLAGR
Trigger: CCTCCCAGCCAGGCTCCTCCAGGCCTCTGGTTTAGC...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCCAGAGGGCTGGTGACTaGCTTCTAAGCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGQRAGD*LLSRTP
Trigger: GGGGGTCCTGCTTAGAAGCCAGTCACCAGCCCTCTG...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTAGAAAGGGACAGGGATaGACGACCAAAAGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFRKGQG*TTKRRG
Trigger: GCCCCGCCTTTTGGTCGTCCATCCCTGTCCCTTTCT...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCAGAGGGAACATGTGACTaGGTGAGGCAGTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSEGTCD*VRQSGC
Trigger: GCACCCAGACTGCCTCACTCAGTCACATGTTCCCTC...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTAAACCGGGTCATGGATaGGCTGCAGCATGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFKPGHG*AAAWKW
Trigger: CCACTTCCATGCTGCAGCTCATCCATGACCCGGTTT...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCGCAACTGCCGCCGTTTaGAGCGCTCATCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSATAAV*SAHRGW
Trigger: CCAGCCGCGATGAGCGCTTCAAACGGCGGCAGTTGC...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGAAAGTTCTCTGCGGCTaGGGTAGCGGAAGACAGACA +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLKVLCG*GSGRQT
Trigger: TGTCTGTCTTCCGCTACCTCAGCCGCAGAGAACTTT...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAGTCCTGGCAGCCTATTaGCGAGCCATGTCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPVLAAY*RAMSVA
Trigger: AGCAACTGACATGGCTCGTCAATAGGCTGCCAGGAC...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGGAAGATCAAGGGTCCTaGGAAGGGGGCAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWEDQGS*EGGSWR
Trigger: CCTCCAGCTGCCCCCTTCTCAGGACCCTTGATCTTC...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTGAAGCGTGGCATCTGTaGTGTCAAGGCCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLEAWHL*CQGLPA
Trigger: GGCTGGCAGGCCTTGACATCACAGATGCCACGCTTC...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGCGCAGGCTTTTCGAGTaGTCTGCTTGCATCCTCGAA +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLRRLFE*SACILE
Trigger: TTCGAGGATGCAAGCAGATCACTCGAAAAGCCTGCG...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCAGGGCCCAGTGCAGATaGAGGTTGCACAAACACCCC +
Preference number: 4 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGRAQCR*RLHKHP
Trigger: GGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCT...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGACAAGCCGGGAGAGTGTaGTGGAGGAGAGACGCGCAC +
Preference number: 4 (lower is better)
Translates to: LQEEESLRLGYRKRARKGQAGRV*WRRDAH
Trigger: GTGCGCGTCTCTCCTCCATCACACTCTCCCGGCTTG...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGCCGGGAGAGTGTaGTGGAGGAGAGACGCGCAC +
Preference number: 4 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWQAGRV*WRRDAH
Trigger: GTGCGCGTCTCTCCTCCATCACACTCTCCCGGCTTG...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp TTGATTCCTACTGCCCACCGAAGATCAAGGGTCCTGAGAAGGGGGCAGCTGGAGTCAACAGCACCAGTGTaGTCGGCACGGGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LIPTAHRRSRVLRRGQLESTAPV*SARVWD
Trigger: GTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGA...CTCCAGCTGCCCCCTTCTCAGGACCCTTGATCTTCGGTGGGCAGTAGGAATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR TCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGTCAACAGCACCAGTGTaGTCGGCACGGGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLSTAPV*SARVWD
Trigger: GTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGA...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCGGAAACCTAATTATGTaGACAAGCACGAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPGNLIM*TSTSAG
Trigger: CCCAGCACTCGTGCTTGTTCACATAATTAGGTTTCC...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCAGCCCTGAAAGTTCAGTaGGCCACTGGGGCTAGACAC +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSALKVQ*ATGARH
Trigger: GTGTCTAGCCCCAGTGGCTCACTGAACTTTCAGGGC...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCACAGCCGCCGCCATTTTaGACCCGTCAGACTCTCACA +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSQPPPF*TRQTLT
Trigger: TGTGAGAGTCTGACGGGTTCAAAATGGCGGCGGCTG...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR GCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCATGGGTCAGATGCACTTaGCTGTCCTTTCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPWVRCT*LSFRGA
Trigger: TGCTCCCCGAAAGGACAGGCAAGTGCATCTGACCCA...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGACGGAGGACACAGGACTaGTTCATGCGTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LQEEESLRLGYRKRARKGRRTQD*FMRPGP
Trigger: GGGGCCTGGACGCATGAAGCAGTCCTGTGTCCTCCG...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTCGGAGGACACAGGACTaGTTCATGCGTCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSRRTQD*FMRPGP
Trigger: GGGGCCTGGACGCATGAAGCAGTCCTGTGTCCTCCG...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCGCCGCCGCCGCCGCTaGCGGGGAGGGGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPRRRRR*RGGVLF
Trigger: AAACAACACCCCTCCCCGGCAGCGGCGGCGGCGGCG...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAACAGCCGCTGGGAAGGTaGTCCGAGAGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKQPLGR*SESRRR
Trigger: GCGGCGGCGGCTCTCGGAGCACCTTCCCAGCGGCTG...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGACACACAGAGGCACGTaGACACCCCCTTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGTHRGT*TPPSMA
Trigger: AGCCATGGAAGGGGGTGTGCACGTGCCTCTGTGTGT...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCAAAAAGCTCTCTGCTaGCCTAGAGAGAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGQKALC*PRERIF
Trigger: AAAGATCCTCTCTCTAGGGCAGCAGAGAGCTTTTTG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGTGGAAGTGGCAAGGGTaGAGTTGGCGTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLWKWQG*SWRLSS
Trigger: AGAAGAGAGACGCCAACTGCACCCTTGCCACTTCCA...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCACCTTTTCCCGTACCATaGTGCGCTCTGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSPFPVP*CALWPA
Trigger: TGCAGGCCACAGAGCGCACCATGGTACGGGAAAAGG...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCAGGGATTCCGGGGGATaGGCCCCCTGGCGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTRDSGG*APWRCP
Trigger: GGGGCAACGCCAGGGGGCCCATCCCCCGGAATCCCT...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGCTTCTCTTCTGGCTTTaGAGACCGGGAGTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGLLFWL*RPGVGG
Trigger: GCCTCCGACTCCCGGTCTCCAAAGCCAGAAGAGAAG...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCAGACACCACAAGAACCTaGCCATGGAGACAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSDTTRT*PWRQGR
Trigger: ACGGCCCTGTCTCCATGGCCAGGTTCTTGTGGTGTC...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGTGGGTAGCAACGAAATaGGTGTGTCCCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLWVATK*VCPWGR
Trigger: TCTACCCCAGGGACACACCCATTTCGTTGCTACCCA...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCGTCTCAGAATCCACTTaGGTAGCAACGAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPVSEST*VATKWV
Trigger: CACCCATTTCGTTGCTACCCAAGTGGATTCTGAGAC...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGCAGAGGGCTGGTGACTaGCTTCTAAGCAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWQRAGD*LLSRTP
Trigger: GGGGGTCCTGCTTAGAAGCCAGTCACCAGCCCTCTG...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGCTCAACAAAGGGCGGTaGAGCGGGAGACACCATGCT +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPLNKGR*SGRHHA
Trigger: AGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAG...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCCTAACTGAGGCACTCTaGAATAAGTCACTGGCATTT +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSLTEAL*NKSLAF
Trigger: AAATGCCAGTGACTTATTCCAGAGTGCCTCAGTTAG...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGCGGTGCTTGGAAAGATaGAGGCAGGGGTTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPRCLER*RQGFWS
Trigger: GGACCAGAACCCCTGCCTCCATCTTTCCAAGCACCG...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCATGTCTACCCAGTCAATaGAATCCACCGTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSCLPSQ*NPPWRA
Trigger: GGCCCTCCACGGTGGATTTCATTGACTGGGTAGACA...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGTCCAGCCTGAGGGAATaGCGAAGGTATAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPSSLRE*RRYSPA
Trigger: AGCAGGGCTATACCTTCGTCATTCCCTCAGGCTGGA...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGGCTGGTTTCATAGTGTaGGGCTTCGTAATGGGGATG +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLAGFIV*GFVMGM
Trigger: CATCCCCATTACGAAGCCTCACACTATGAAACCAGC...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCACACAGAGGGAACATGTaGCTGAGTGAGGCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSHRGNM*LSEAVW
Trigger: CCAGACTGCCTCACTCAGTCACATGTTCCCTCTGTG...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGGAAGATCAAGGGTCCTaGGAAGGGGGCAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWEDQGS*EGGSWR
Trigger: CCTCCAGCTGCCCCCTTCTCAGGACCCTTGATCTTC...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCATGTGGCGAATTATaGGGCGAAGCGTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGACGEL*GEAWHL
Trigger: CAGATGCCACGCTTCGCCTCATAATTCGCCACATGC...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAGGTGGCTGCAGTGACTaGGGTCGAGTCGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLGGCSD*GRVETG
Trigger: TCCTGTCTCGACTCGACCTCAGTCACTGCAGCCACC...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAACAAACACCCCAAACTaGGAGCCCGGCCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLTNTPN*EPGLLA
Trigger: TGCCAGGAGGCCGGGCTCTCAGTTTGGGGTGTTTGT...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAGGACAGAACGCCTGCTaGTCAAGCGTCGGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLGQNAC*SSVGVL
Trigger: GAGAACCCCGACGCTTGAGCAGCAGGCGTTCTGTCC...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTGGGTCATGGATGAGCTaGAGCATGGAAGTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFGSWMS*SMEVGE
Trigger: TTCACCCACTTCCATGCTGCAGCTCATCCATGACCC...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCATGCAGCCGCAGCAACTaGCGCCGTTTGAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: WPRWQRGDHSASIALEVACSRSN*RRLKRS
Trigger: TGAGCGCTTCAAACGGCGGCAGTTGCTGCGGCTGCA...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCATCAAGGCTGACTGGCTaGCTCTTGATGATGCCACTG +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPSRLTG*LLMMPL
Trigger: CAGTGGCATCATCAAGAGGCAGCCAGTCAGCCTTGA...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTCGACAGCACAGCCTGTaGTTTCCCCTCAGATCAATC +
Preference number: 4 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFRQHSL*FPLRSI
Trigger: GATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCG...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCCTGCTGTTTGTAAGGTaGAGTCAAAAGATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGLLFVR*SQKIQQ
Trigger: CTGCTGAATCTTTTGACTGCACCTTACAAACAGCAG...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCATGCGAACAATGCTGCTaGGTCACCCACATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSCEQCC*VTHMQL
Trigger: GAGCTGCATGTGGGTGACGCAGCAGCATTGTTCGCA...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR GCA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTAGCCGCGGCTTCCTGTaGCTGCGAACAATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSSRGFL*LRTMLL
Trigger: CAGCAGCATTGTTCGCAGGCACAGGAAGCCGCGGCT...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR CCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGATTCACAGTGAAGTCTaGATCCGGCATTTTTATTCC +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLIHSEV*IRHFYS
Trigger: GGAATAAAAATGCCGGATCCAGACTTCACTGTGAAT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGCTCTCGCTCCTCCTCTaGGGTCTCATAGTAGCGTGT +
Preference number: 4 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGLSLLL*GLIVAC
Trigger: ACACGCTACTATGAGACCCCAGAGGAGGAGCGAGAG...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCAATTCCTTAGTTAGGTaGGAACGGTTGGTTATGCAG +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSNSLVR*ERLVMQ
Trigger: CTGCATAACCAACCGTTCCCACCTAACTAAGGAATT...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCCACACTTGTCCATTGTaGGAGCCCCGGCTACAGTCA +
Preference number: 4 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGHTCPL*EPRLQS
Trigger: TGACTGTAGCCGGGGCTCCCACAATGGACAAGTGTG...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCAAGCTTATCCCTTTTTaGCCACTGTACTATAGGAAC +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSKLIPF*PLYYRN
Trigger: GTTCCTATAGTACAGTGGCCAAAAAGGGATAAGCTT...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGGCACTCGTCTCCGTCTaGCTCCTGACACAATCGGGG +
Preference number: 4 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWALVSV*LLTQSG
Trigger: CCCCGATTGTGTCAGGAGCCAGACGGAGACGAGTGC...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGCTGAGTGAGGCAGTCTaGGTGCCAAGCACTGTCGGA +
Preference number: 4 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLLSEAV*VPSTVG
Trigger: TCCGACAGTGCTTGGCACCCAGACTGCCTCACTCAG...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TTGATTCCTACTGCCCACCGAAGATCAAGGGTCCTGAGAAGGGGGCAGCTGGAGGGGGCCGCAGGACTTTaGCTTGCACAGCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: LIPTAHRRSRVLRRGQLEGAAGL*LAQLLR
Trigger: ACGAAGAAGCTGTGCAAGCCAAAGTCCTGCGGCCCC...CTCCAGCTGCCCCCTTCTCAGGACCCTTGATCTTCGGTGGGCAGTAGGAATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR CCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGGGGGAAACCGGGTCATaGATGAGCTGCAGCATGGAA +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPGETGS*MSCSME
Trigger: TTCCATGCTGCAGCTCATCCATGACCCGGTTTCCCC...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCAACAATGGATGTCCCGTaGAGCTCTTTGGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSTMDVP*SSLVGL
Trigger: GAGGCCCACCAAAGAGCTCCACGGGACATCCATTGT...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGACACCACAAGAACCTaGCCATGGAGACAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLDTTRT*PWRQGR
Trigger: ACGGCCCTGTCTCCATGGCCAGGTTCTTGTGGTGTC...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTTGGGTAGCAACGAAATaGGTGTGTCCCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFWVATK*VCPWGR
Trigger: TCTACCCCAGGGACACACCCATTTCGTTGCTACCCA...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTCACACTTTAGACCCCTaGTGCCTGGGCTCCATTCCC +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLHTLDP*CLGSIP
Trigger: GGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTG...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGTGGCAAGGGTGCAGTTaGCGTCTCTCTTCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGWQGCS*RLSSQW
Trigger: CCACTGAGAAGAGAGACGCCAACTGCACCCTTGCCA...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCGGGCCTGGAGACCAATaGAAGTGGGCAGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCGPGDQ*KWAEGH
Trigger: ATGACCCTCTGCCCACTTCCATTGGTCTCCAGGCCC...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTAACCCAGCAAGGGCATaGTCCATCTGCTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFNPARA*SICCLF
Trigger: GAAAAGGCAGCAGATGGACCATGCCCTTGCTGGGTT...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTTCGCCCCGGTGCTTaGAAAGATGGAGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLFRPGA*KDGGRG
Trigger: ACCCCTGCCTCCATCTTTCCAAGCACCGGGGCGAAA...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CAA 72 bp GGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATaGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GLGGKEGTTLPL*LWKWQGCSWRL
Trigger: GAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGTGTGTTCACGTCCATaGCATCCACCATGCGACGAC +
Preference number: 4 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLVCSRP*HPPCDD
Trigger: GTCGTCGCATGGTGGATGTCATGGACGTGAACACAC...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAGGAGTATACACAGCATaGATCCAGCCTGAGGGAATG +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPGVYTA*IQPEGM
Trigger: CATTCCCTCAGGCTGGATTCATGCTGTGTATACTCC...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGTCTTTACATCAGCAATaGGAGCATCTTCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLSLHQQ*EHLHLL
Trigger: TAGAAGATGAAGATGCTCTCATTGCTGATGTAAAGA...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTGAACATGTGACTGAGTaGGGCAGTCTGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLEHVTE*GSLGAK
Trigger: CTTGGCACCCAGACTGCCTCACTCAGTCACATGTTC...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGGCATGTGGCGAATTATaGGGCGAAGCGTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWACGEL*GEAWHL
Trigger: CAGATGCCACGCTTCGCCTCATAATTCGCCACATGC...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCGAAGGTCGATCAAGGTaGCGTTGGCAATGCGCCGTA +
Preference number: 4 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCEGRSR*RWQCAV
Trigger: TACGGCGCATTGCCAACGTCACCTTGATCGACCTTC...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCGAGTTCTTGTCCAAGTaGGAAGTAAAAGATTCCAAA +
Preference number: 4 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSEFLSK*EVKDSK
Trigger: TTTGGAATCTTTTACTTCTCACTTGGACAAGAACTC...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAGCACAGTTAAGGACGTaGGGTTTGGGAGATCTCAAC +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPAQLRT*GLGDLN
Trigger: GTTGAGATCTCCCAAACCTCACGTCCTTAACTGTGC...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CTGACCTGGTTTATCAGCCGGTGGAGTAAGCAAGTCCCGAATTTGAGGGTCCTTTCTGGTCCTGCAGTCTaGGGGCAGGCTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LTWFISRWSKQVPNLRVLSGPAV*GQALLA
Trigger: TGCCAGGAGAGCCTGCCCTCAGACTGCAGGACCAGA...AAGGACCCTCAAATTCGGGACTTGCTTACTCCACCGGCTGATAAACCAGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR TCA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTAGGGCAGTCCAGCTCTaGCCCTTCAGACTACCCAGA +
Preference number: 4 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSRAVQL*PFRLPR
Trigger: TCTGGGTAGTCTGAAGGGTCAGAGCTGGACTGCCCT...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR GCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAGGGACACATTTCTTGTaGAGTGGCAGAGACTCCAAC +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPGTHFL*SGRDSN
Trigger: GTTGGAGTCTCTGCCACTGCACAAGAAATGTGTCCC...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCCGCAGGACTTTGGCTTaGACAGCTTCTTCGTCACTC +
Preference number: 4 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGRRTLA*TASSSL
Trigger: GAGTGACGAAGAAGCTGTGCAAGCCAAAGTCCTGCG...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAAGTGCGCTCTGTGGCCTaGAGCCGCAGCAACTGCCGC +
Preference number: 4 (lower is better)
Translates to: HMDQPSPLKTISPHSPKEVRSVA*SRSNCR
Trigger: GCGGCAGTTGCTGCGGCTGCAGGCCACAGAGCGCAC...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGATCCAGACCTCCCGCTaGATCCAGCTTTCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLIQTSR*IQLSSP
Trigger: TGGAGACGAAAGCTGGATGCAGCGGGAGGTCTGGAT...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR GCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTATCCAGACCTCCCGCTaGATCCAGCTTTCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLIQTSR*IQLSSP
Trigger: TGGAGACGAAAGCTGGATGCAGCGGGAGGTCTGGAT...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCACGAGCCATGTCAGTTaGTTTTTAGAGATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPTSHVS*FLEMLV
Trigger: GACCAACATCTCTAAAAAGCAACTGACATGGCTCGT...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAGTCCTTGATTCCTACTaGCCACCGAAGATCAAGGGT +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPVLDSY*PPKIKG
Trigger: ACCCTTGATCTTCGGTGGGCAGTAGGAATCAAGGAC...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCCAATTTATTGCAACCTaGCATATTGAGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSQFIAT*HIELCE
Trigger: CTCACAGAGCTCAATATGGCAGGTTGCAATAAATTG...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp ATTACACAAATATCACCCATTCCCACGTGTCAGAGGAAAGATGTCCTTGCTCTCTGGGCCCCCTGGCGTTaGCCCTCCTCCCGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: ITQISPIPTCQRKDVLALWAPWR*PSSRSV
Trigger: GACGCTCCGGGAGGAGGGGCAACGCCAGGGGGCCCA...GAGAGCAAGGACATCTTTCCTCTGACACGTGGGAATGGGTGATATTTGTGTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR GCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAAGCTGCTGGCCCCTCCTaGGCAAGCCGGGAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: HMDQPSPLKTISPHSPKEAAGPS*ASRESV
Trigger: CACACTCTCCCGGCTTGCGCAGGAGGGGCCAGCAGC...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAATGGGACTCCTGGGGCTaGTGGCCCCTCCTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKWDSWG*WPLLRK
Trigger: CTTGCGCAGGAGGGGCCAGCAGCCCCAGGAGTCCCA...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCCTCCCTCTGAGGACGTaGATCCTGGGAAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCLPLRT*ILGKPS
Trigger: AGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAG...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTATCCCGGCACAATCCCTaGTCTGAAGGGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLSRHNP*SEGVSP
Trigger: TGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGA...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGTTTCGGGGAGCACACTaGGGATCCCACACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLFRGAH*GSHTCP
Trigger: TGGACAAGTGTGGGATCCCCAGTGTGCTCCCCGAAA...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCAAGCTTATCCCTTTTTaGCCACTGTACTATAGGAAC +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSKLIPF*PLYYRN
Trigger: GTTCCTATAGTACAGTGGCCAAAAAGGGATAAGCTT...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGACATTCCCAGCAATTTaGCAATTCTTCGTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLTFPAI*QFFVKQ
Trigger: TTGCTTAACGAAGAATTGCCAAATTGCTGGGAATGT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGTCCATTTTCCGCTTCTaGGCTTTCTCCGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGSIFRF*AFSELS
Trigger: GGACAGCTCGGAGAAAGCCCAGAAGCGGAAAATGGA...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGAGGGGCCGCAGGACTTTaGCTTGCACAGCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: LQEEESLRLGYRKRARKGGAAGL*LAQLLR
Trigger: ACGAAGAAGCTGTGCAAGCCAAAGTCCTGCGGCCCC...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCGGGGAAACCGGGTCATaGATGAGCTGCAGCATGGAA +
Preference number: 4 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCGETGS*MSCSME
Trigger: TTCCATGCTGCAGCTCATCCATGACCCGGTTTCCCC...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTGGGGAAACCGGGTCATaGATGAGCTGCAGCATGGAA +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLGETGS*MSCSME
Trigger: TTCCATGCTGCAGCTCATCCATGACCCGGTTTCCCC...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGACAGGAGGGGCATGTaGCGAATTATGAGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLDRRGM*RIMRRS
Trigger: GCTTCGCCTCATAATTCGCCACATGCCCCTCCTGTC...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTGACAGGAGGGGCATGTaGCGAATTATGAGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLDRRGM*RIMRRS
Trigger: GCTTCGCCTCATAATTCGCCACATGCCCCTCCTGTC...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTAGGAGAGACGCGCACTaGACACCACAAGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSRRDAH*TPQEPG
Trigger: GCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCT...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCATCAACCCCAGATTATTaGGGCCTGGAGACCAATGGA +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPSTPDY*GLETNG
Trigger: TCCATTGGTCTCCAGGCCCCAATAATCTGGGGTTGA...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCAAATGCGCTGACAATCTaGTACCCGGTCACCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSNALTI*YPVTQK
Trigger: TTTCTGGGTGACCGGGTATCAGATTGTCAGCGCATT...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAAGCATGAATCCAGCCTaGGGGAATGACGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPSMNPA*GNDEGI
Trigger: TATACCTTCGTCATTCCCTCAGGCTGGATTCATGCT...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGGGAGTATACACAGCATaGATCCAGCCTGAGGGAATG +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPGVYTA*IQPEGM
Trigger: CATTCCCTCAGGCTGGATTCATGCTGTGTATACTCC...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCTCTCCGTCTGGCTCCTaGCACAATCGGGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTSPSGS*HNRGGS
Trigger: GCTGCCTCCCCGATTGTGTCAGGAGCCAGACGGAGA...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCAGATACAGCATTCCATaGGTTTCTTCTCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGRYSIP*VSSQSL
Trigger: AAGACTTTGAGAAGAAACTCATGGAATGCTGTATCT...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCTGGGTGTGTCTTAGCTGATCTTCTGTATCAGCTTCTCGTCAGACAGGCAGTAATGGAAGTGGGTGAATaGGGCGGGGGCGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: AGCVLADLLYQLLVRQAVMEVGE*GGGVRG
Trigger: GCCTCTCACGCCCCCGCCTCATTCACCCACTTCCAT...TACTGCCTGTCTGACGAGAAGCTGATACAGAAGATCAGCTAAGACACACCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR TCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGGAATTTGAGGGTCCTTaGTTCCTACTGCCCACCGAA +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPEFEGP*FLLPTE
Trigger: TTCGGTGGGCAGTAGGAATCAAGGACCCTCAAATTC...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCGTAAGGTGGCTGCAGTaGCTGAGGTCGAGTCGAGAC +
Preference number: 4 (lower is better)
Translates to: HSASIALEVARVQLASLFVRWLQ*LRSSRD
Trigger: GTCTCGACTCGACCTCAGTCACTGCAGCCACCTTAC...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGAGTAGATTGGAGGACTaGTCTGTAAGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPSRLED*SVRWLQ
Trigger: CTGCAGCCACCTTACAGATCAGTCCTCCAATCTACT...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGGAAGGTCGATCAAGGTaGCGTTGGCAATGCGCCGTA +
Preference number: 4 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWEGRSR*RWQCAV
Trigger: TACGGCGCATTGCCAACGTCACCTTGATCGACCTTC...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCGAGTTCTTGTCCAAGTaGGAAGTAAAAGATTCCAAA +
Preference number: 4 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSEFLSK*EVKDSK
Trigger: TTTGGAATCTTTTACTTCTCACTTGGACAAGAACTC...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCACAGTTCCAGCTCCTCTaGAGAGCTTCAACCCCAATA +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSQFQLL*RASTPI
Trigger: TATTGGGGTTGAAGCTCTTCAGAGGAGCTGGAACTG...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGAGGAAGAGGAAAGCCTaGGACTGGGCTACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWRKRKA*DWATGR
Trigger: TCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCT...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTTGCCGAGGCTCTTGGTaGAGTTTCCCCAGCGTCTTT +
Preference number: 4 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSCRGSW*SFPSVF
Trigger: AAAGACGCTGGGGAAACTTCACCAAGAGCCTCGGCA...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR GCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAGGGTTCTCGATCCACTaGTTCCTCATCCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLGFSIH*FLIPIP
Trigger: GGGAATGGGGATGAGGAAGCAGTGGATCGAGAACCC...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTATGGGTCAGATGCACTTaGCTGTCCTTTCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLWVRCT*LSFRGA
Trigger: TGCTCCCCGAAAGGACAGGCAAGTGCATCTGACCCA...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGCAGACAGCTCCTTTTTaGCGCTGGGATTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPQTAPF*RWDCSP
Trigger: AGGAGAACAATCCCAGCGGCAAAAAGGAGCTGTCTG...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTTGTGATGTCAAGGCCTaGCAGCCGGAAGTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSCDVKA*QPEVGH
Trigger: ATGACCGACTTCCGGCTGGCAGGCCTTGACATCACA...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAATGGCCTCAGAGCCCGTaGAGGGTCGAGGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: HMDQPSPLKTISPHSPKEWPQSP*RVEERL
Trigger: GAGCCTCTCCTCGACCCTGCACGGGCTCTGAGGCCA...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCACACACAGAGGCACGTaGACACCCCCTTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: HSASIALEVARVQLASLFTHRGT*TPPSMA
Trigger: AGCCATGGAAGGGGGTGTGCACGTGCCTCTGTGTGT...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCACACACAGAGGCACGTaGACACCCCCTTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSTHRGT*TPPSMA
Trigger: AGCCATGGAAGGGGGTGTGCACGTGCCTCTGTGTGT...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GTGCTCGCAGGCTTTTCGAGTGATCTGCTTGCATCCTCGAAGGTCGATCAAGGTTCCCGGCACAATCCCTaGTCTGAAGGGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VLAGFSSDLLASSKVDQGSRHNP*SEGVSP
Trigger: TGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGA...ACCTTGATCGACCTTCGAGGATGCAAGCAGATCACTCGAAAAGCCTGCGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR GCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCAGGGCATGGTCCATCTaGTGCCTTTTCTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSRAWSI*CLFWAP
Trigger: GGGAGCCCAGAAAAGGCAGCAGATGGACCATGCCCT...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGCAGATTGTAGGACATaGGATGGACTCCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLADCRT*DGLPRF
Trigger: GAACCTGGGGAGTCCATCGCATGTCCTACAATCTGC...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTTCTCCAGCCTGGTGTaGCTAAACTCGAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWFSSLV*LNSRLM
Trigger: CATCAGCCTCGAGTTTAGCCACACCAGGCTGGAGAA...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCTTCTCCAGCCTGGTGTaGCTAAACTCGAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCFSSLV*LNSRLM
Trigger: CATCAGCCTCGAGTTTAGCCACACCAGGCTGGAGAA...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCTTTGTTGATTCAGTCTaGCTTTCCTTCAAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPFVDSV*LSFKCL
Trigger: AAGGCACTTGAAGGAAAGCCAGACTGAATCAACAAA...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGATTTCGGGGAGCACACTaGGGATCCCACACTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LQEEESLRLGYRKRARKGFRGAH*GSHTCP
Trigger: TGGACAAGTGTGGGATCCCCAGTGTGCTCCCCGAAA...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCACCTTCAAGCTCAAAATaGGTCAGATGCACTTGCCTG +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPPSSSK*VRCTCL
Trigger: CAGGCAAGTGCATCTGACCCATTTTGAGCTTGAAGG...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCACTCCTGGTAGCACTTTaGACATTCCCAGCAATTTGG +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPLLVAL*TFPAIW
Trigger: CCAAATTGCTGGGAATGTCCAAAGTGCTACCAGGAG...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCATGCCACTGAGGGCCTaGGGCACAATGGCCTTACAC +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSMPLRA*GTMALH
Trigger: GTGTAAGGCCATTGTGCCCCAGGCCCTCAGTGGCAT...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCGCGATTGTCCTGACCTaGTTTATCAGCCGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCAIVLT*FISRWS
Trigger: ACTCCACCGGCTGATAAACCAGGTCAGGACAATCGC...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAGAGAGCCCGGCCTCCTaGCAGGCGAGTAAGCGAGCA +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKESPAS*QASKRA
Trigger: TGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCTC...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCACAAGAACCTGGCCATaGAGACAGGGCCGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGTRTWP*RQGRFL
Trigger: AAGAAAACGGCCCTGTCTCCATGGCCAGGTTCTTGT...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTAACAAGCACGAGTGCTaGGCAGAACCAAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLNKHEC*AEPSSR
Trigger: CCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTT...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCATCTTCCTTTCCTTTGTaGTTTTTCGCCCCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPSSFPL*FFAPVL
Trigger: AAGCACCGGGGCGAAAAACCACAAAGGAAAGGAAGA...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CAA 72 bp AGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTaGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RWQRGDHSASIA*EVARVQLASLF
Trigger: GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGTGTCTCTTCATTCTaGTCCACCTCTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWCVSSF*STSPQR
Trigger: CCTCTGTGGAGAGGTGGATCAGAATGAAGAGACACA...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCAAACCGGGTCATGGATaGGCTGCAGCATGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSKPGHG*AAAWKW
Trigger: CCACTTCCATGCTGCAGCTCATCCATGACCCGGTTT...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACTGGCAGAGGAGGCCGTaGTGGCCTGCAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHWQRRP*WPAAWA
Trigger: TGCCCAAGCTGCAGGCCATCACGGCCTCCTCTGCCA...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR TCA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGGTTGATGGACAAGTCTaGGATGAAGTGCTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWVDGQV*DEVLAG
Trigger: GCCTGCGAGCACTTCATCTCAGACTTGTCCATCAAC...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGGAGGAGCCGCTaGAGCAGCCGCCGCCATTTT +
Preference number: 4 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPHRRSR*SSRRHF
Trigger: AAAATGGCGGCGGCTGCTTCAGCGGCTCCTCCTGTG...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCCAGTTCCAGCTCCTCTaGAGAGCTTCAACCCCAATA +
Preference number: 4 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCQFQLL*RASTPI
Trigger: TATTGGGGTTGAAGCTCTTCAGAGGAGCTGGAACTG...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAAGGAAGAGGAAAGCCTaGGACTGGGCTACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLRKRKA*DWATGR
Trigger: TCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCT...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAGGCTCCCTTTTCTGCTaGCCAATTTACGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: WPRWQRGDHSASIALEVAGSLFC*PIYVHG
Trigger: ACCGTGCACGTAAATTGGTCAGCAGAAAAGGGAGCC...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGGAACGGTTGGTTATaGAGTACACATAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLGNGWL*STHSAP
Trigger: TGGAGCGCTATGTGTACTGCATAACCAACCGTTCCC...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTGGGAACGGTTGGTTATaGAGTACACATAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLGNGWL*STHSAP
Trigger: TGGAGCGCTATGTGTACTGCATAACCAACCGTTCCC...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCAAAATGGGTCAGATaGACTTGCCTGTCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGSKWVR*TCLSFR
Trigger: CCGAAAGGACAGGCAAGTGCATCTGACCCATTTTGA...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCGCAGGACTTTGGCTTaGACAGCTTCTTCGTCACTC +
Preference number: 4 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWRRTLA*TASSSL
Trigger: GAGTGACGAAGAAGCTGTGCAAGCCAAAGTCCTGCG...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGTCATGGATGAGCTaGAGCATGGAAGTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSGSWMS*SMEVGE
Trigger: TTCACCCACTTCCATGCTGCAGCTCATCCATGACCC...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTTCAAGGCTGACTGGCTaGCTCTTGATGATGCCACTG +
Preference number: 4 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSSRLTG*LLMMPL
Trigger: CAGTGGCATCATCAAGAGGCAGCCAGTCAGCCTTGA...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGTCCTTGATTCCTACTaGCCACCGAAGATCAAGGGT +
Preference number: 4 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLVLDSY*PPKIKG
Trigger: ACCCTTGATCTTCGGTGGGCAGTAGGAATCAAGGAC...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCAAGTCTGAGATGAAGTaGTCGCAGGCTTTTCGAGTG +
Preference number: 4 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGKSEMK*SQAFRV
Trigger: CACTCGAAAAGCCTGCGAGCACTTCATCTCAGACTT...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGACGACAGCACAGCCTGTaGTTTCCCCTCAGATCAATC +
Preference number: 4 (lower is better)
Translates to: LQEEESLRLGYRKRARKGRQHSL*FPLRSI
Trigger: GATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCG...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAGGACAGGCCGTTCAATaGAAAGTAAAAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLGQAVQ*KVKGGS
Trigger: GCTGCCCCCTTTTACTTTGCATTGAACGGCCTGTCC...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTGTGCAAAAAGCTCTCTaGTGCCCTAGAGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLVQKAL*CPRERI
Trigger: GATCCTCTCTCTAGGGCAGCAGAGAGCTTTTTGCAC...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAGCAGATTGTAGGACATaGGATGGACTCCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: WPRWQRGDHSASIALEVAADCRT*DGLPRF
Trigger: GAACCTGGGGAGTCCATCGCATGTCCTACAATCTGC...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAGTGTCCACTGAGCCATaGTCATTTCAATGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPVSTEP*SFQCLS
Trigger: AGAAAGGCATTGAAATGACCATGGCTCAGTGGACAC...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGATAGCGAAACTTATTTaGAACCCGTGTCCGATCTTC +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLIAKLI*NPCPIF
Trigger: GAAGATCGGACACGGGTTCCAAATAAGTTTCGCTAT...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCGCACTCGTCTCCGTCTaGCTCCTGACACAATCGGGG +
Preference number: 4 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTALVSV*LLTQSG
Trigger: CCCCGATTGTGTCAGGAGCCAGACGGAGACGAGTGC...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCGGGCCTGGGGCACAATaGCCTTACACCTACTCAAGT +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSGPGAQ*PYTYSS
Trigger: ACTTGAGTAGGTGTAAGGCCATTGTGCCCCAGGCCC...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCAGAGGCTCTCCTCGGTaGGGAGTCAGGGGAAGATCG +
Preference number: 4 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTRGSPR*GVRGRS
Trigger: CGATCTTCCCCTGACTCCCCACCGAGGAGAGCCTCT...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCGTAAGTCGGGTAGGCTaGGGTGGGAAACCTAATTAT +
Preference number: 4 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGVSRVG*GGKPNY
Trigger: ATAATTAGGTTTCCCACCCCAGCCTACCCGACTTAC...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCATGGGTAGCAACGAAATaGGTGTGTCCCTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: WPRWQRGDHSASIALEVAWVATK*VCPWGR
Trigger: TCTACCCCAGGGACACACCCATTTCGTTGCTACCCA...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGGTCTCAGAATCCACTTaGGTAGCAACGAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPVSEST*VATKWV
Trigger: CACCCATTTCGTTGCTACCCAAGTGGATTCTGAGAC...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACAGGCAGGTTGGGGCTTaGCCCAGTCCTCTGCCGCCT +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHRQVGA*PSPLPP
Trigger: AGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGCCT...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAGCTAAACCAGAGGCCTaGAGGAGCCTGGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKAKPEA*RSLAGR
Trigger: CCTCCCAGCCAGGCTCCTCCAGGCCTCTGGTTTAGC...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTACAAAACTGGCCTAGGTaGCAAAGAGGGGACCACTCT +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLQNWPR*QRGDHS
Trigger: AGAGTGGTCCCCTCTTTGCCACCTAGGCCAGTTTTG...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGTCTTCCTTTCCTTTGTaGTTTTTCGCCCCGGTGCTT +
Preference number: 4 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGSSFPL*FFAPVL
Trigger: AAGCACCGGGGCGAAAAACCACAAAGGAAAGGAAGA...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAACGTTTCCCGTCGCTCTaGAGCTGCCGAGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKRFPSL*SCRGSW
Trigger: CCAAGAGCCTCGGCAGCTCCAGAGCGACGGGAAACG...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR TCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTCTCAAGCCACCCCGCTaGATATACTCTACATTAAAA +
Preference number: 4 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFLKPPR*IYSTLK
Trigger: TTTTAATGTAGAGTATATTCAGCGGGGTGGCTTGAG...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAATGCGCTGACAATCTaGTACCCGGTCACCCAGAAA +
Preference number: 4 (lower is better)
Translates to: WPRWQRGDHSASIALEVANALTI*YPVTQK
Trigger: TTTCTGGGTGACCGGGTATCAGATTGTCAGCGCATT...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGTATAGCCCTGCTTaGGCTCAATGCGCTGACAAT +
Preference number: 4 (lower is better)
Translates to: WPRWQRGDHSASIALEVARYSPA*AQCADN
Trigger: ATTGTCAGCGCATTGAGCTCAAGCAGGGCTATACCT...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGCTACAGTCAGAAGATaGGTCCCCAGCCAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLATVRR*VPSQSF
Trigger: AAAACTTTGGCTGGGGACTCATCTTCTGACTGTAGC...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCGCTACAGTCAGAAGATaGGTCCCCAGCCAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCATVRR*VPSQSF
Trigger: AAAACTTTGGCTGGGGACTCATCTTCTGACTGTAGC...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTGGAGGCAGCCAGGATaGACAATCTCATTGCAGATA +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLWRQPG*TISLQI
Trigger: TATCTGCAATGAGATTGTTCATCCTGGCTGCCTCCA...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CAATTTATTGCAACCTGCCATATTGAGCTCTGTGAGAGAGTAGCGAGTGGAAGAAATGAGGCGGGGGCGTaGGAGGCTCATCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QFIATCHIELCERVASGRNEAGA*EAHRSS
Trigger: GGAGCTGCGATGAGCCTCTCACGCCCCCGCCTCATT...TCTTCCACTCGCTACTCTCTCACAGAGCTCAATATGGCAGGTTGCAATAAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR TCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAGGTGGCTGCAGTGACTaGGGTCGAGTCGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKGGCSD*GRVETG
Trigger: TCCTGTCTCGACTCGACCTCAGTCACTGCAGCCACC...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCCGCAGGCTTTTCGAGTaGTCTGCTTGCATCCTCGAA +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSRRLFE*SACILE
Trigger: TTCGAGGATGCAAGCAGATCACTCGAAAAGCCTGCG...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCAGGAGCAAACAGTTGCTaGATCAAACCTTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSGANSC*IKPSLL
Trigger: CAGAAGAGAAGGTTTGATTCAGCAACTGTTTGCTCC...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCAGATCGGTTTCCTGTTaGATCTGGGCTGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: HSASIALEVARVQLASLFRSVSC*IWAGCV
Trigger: GACACACCCAGCCCAGATTCAACAGGAAACCGATCT...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATAGGCTGCTCCCTCTaGGGACGTGCATCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTIGCSL*GRASWE
Trigger: TTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTAT...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAGCACAATCCCTGCTCTaGAGGGGTCTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKAQSLL*RGLSTS
Trigger: GGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGC...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCGACTTCGGCAGGTTTTaGCCAGTCCATCATAATCCA +
Preference number: 4 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCDFGRF*PVHHNP
Trigger: TGGATTATGATGGACTGGGCAAAACCTGCCGAAGTC...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCGGGTCATGGATGAGCTaGAGCATGGAAGTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSGSWMS*SMEVGE
Trigger: TTCACCCACTTCCATGCTGCAGCTCATCCATGACCC...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGATTTATACCACGTCTTaGACACTCGCATACATTCAC +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLIYTTS*TLAYIH
Trigger: GTGAATGTATGCGAGTGTGCAAGACGTGGTATAAAT...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAACGAGCCATGTCAGTTaGTTTTTAGAGATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPTSHVS*FLEMLV
Trigger: GACCAACATCTCTAAAAAGCAACTGACATGGCTCGT...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAGCTTTTCGAGTGATCTaGTTGCATCCTCGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: WPRWQRGDHSASIALEVAAFRVI*LHPRRS
Trigger: CGACCTTCGAGGATGCAAGCAGATCACTCGAAAAGC...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCCGACAGCACAGCCTGTaGTTTCCCCTCAGATCAATC +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSRQHSL*FPLRSI
Trigger: GATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCG...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAACTCAGAACCAGGCACTaGTGGGGACCATGGATGGGG +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKLRTRH*WGPWMG
Trigger: CCCCATCCATGGTCCCCAGCAGTGCCTGGTTCTGAG...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACACCCCCTTCCATGGCTaGAGGCAGAGGGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHTPFHG*RQRAGD
Trigger: GTCACCAGCCCTCTGCCTGCAGCCATGGAAGGGGGT...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TTGATTCCTACTGCCCACCGAAGATCAAGGGTCCTGAGAAGGGGGCAGCTGGAGAAGAGGGGACCACTCTaGCTCTATTGCTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LIPTAHRRSRVLRRGQLEKRGPL*LYCFGS
Trigger: ACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTT...CTCCAGCTGCCCCCTTCTCAGGACCCTTGATCTTCGGTGGGCAGTAGGAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR GCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCGCTGCGTCACCCACATaGAGCTCCCAGAAATGCTTT +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSAASPT*SSQKCF
Trigger: AAAGCATTTCTGGGAGCTGCATGTGGGTGACGCAGC...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR CCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGTTAGGTGGGAACGGTTaGTTATGCAGTACACATAGC +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPLGGNG*LCSTHS
Trigger: GCTATGTGTACTGCATAACCAACCGTTCCCACCTAA...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAACATTTCTTGTGCAGTaGCAGAGACTCCAACTTATC +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPTFLVQ*QRLQLI
Trigger: GATAAGTTGGAGTCTCTGCCACTGCACAAGAAATGT...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGCATCTTCTATCCCTGTaGGGACACATTTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPHLLSL*GHISCA
Trigger: TGCACAAGAAATGTGTCCCCACAGGGATAGAAGATG...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCTCCATTTTCCGCTTCTaGGCTTTCTCCGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: HSASIALEVARVQLASLFSIFRF*AFSELS
Trigger: GGACAGCTCGGAGAAAGCCCAGAAGCGGAAAATGGA...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCGAGGTCTTTCAGTCCTaGCAGCCTATTGACGAGCCA +
Preference number: 4 (lower is better)
Translates to: HSASIALEVARVQLASLFEVFQS*QPIDEP
Trigger: TGGCTCGTCAATAGGCTGCCAGGACTGAAAGACCTC...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCAACAAGCACGAGTGCTaGGCAGAACCAAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSNKHEC*AEPSSR
Trigger: CCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTT...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCAAATGGGTGTGTCCCTaGGGTAGACAGTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSKWVCP*GRQFQL
Trigger: GAGCTGGAACTGTCTACCCCAGGGACACACCCATTT...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGTCAACCCCAGATTATTaGGGCCTGGAGACCAATGGA +
Preference number: 4 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWSTPDY*GLETNG
Trigger: TCCATTGGTCTCCAGGCCCCAATAATCTGGGGTTGA...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CAA 72 bp GAGATGAAGTGCTCGCAGGCTTTTCGAGTGATCTGCTaGCATCCTCGAAGGTCGATCAAGGTGACGTTGGCA +
Preference number: 4 (lower is better)
Translates to: EMKCSQAFRVIC*HPRRSIKVTLA
Trigger: TGCCAACGTCACCTTGATCGACCTTCGAGGATGCAAGCAGATCACTCGAAAAGCCTGCGAGCACTTCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR TCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCCAAGATGGCATTTGTTaGTTCAGTCTGGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGQDGIC*FSLAFL
Trigger: AAGGAAAGCCAGACTGAATCAACAAATGCCATCTTG...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCTGGGTGTGTCTTAGCTGATCTTCTGTATCAGCTTCTCGTCAGACAGGCAGTACACAGAGGGAACATGTaGCTGAGTGAGGCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: AGCVLADLLYQLLVRQAVHRGNM*LSEAVW
Trigger: CCAGACTGCCTCACTCAGTCACATGTTCCCTCTGTG...TACTGCCTGTCTGACGAGAAGCTGATACAGAAGATCAGCTAAGACACACCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR TCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCCACAGAGGGAACATGTaGCTGAGTGAGGCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTHRGNM*LSEAVW
Trigger: CCAGACTGCCTCACTCAGTCACATGTTCCCTCTGTG...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAGTAAGGTGGCTGCAGTaGCTGAGGTCGAGTCGAGAC +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKVRWLQ*LRSSRD
Trigger: GTCTCGACTCGACCTCAGTCACTGCAGCCACCTTAC...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCAGTAGATTGGAGGACTaGTCTGTAAGGTGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSSRLED*SVRWLQ
Trigger: CTGCAGCCACCTTACAGATCAGTCCTCCAATCTACT...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTGGAGCAAACAGTTGCTaGATCAAACCTTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLGANSC*IKPSLL
Trigger: CAGAAGAGAAGGTTTGATTCAGCAACTGTTTGCTCC...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGGGTGTGTCTTAGCTaGTCTTCTGTATCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWWVCLS*SSVSAS
Trigger: AGAAGCTGATACAGAAGATCAGCTAAGACACACCCA...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCGCACAGTTAAGGACGTaGGGTTTGGGAGATCTCAAC +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSAQLRT*GLGDLN
Trigger: GTTGAGATCTCCCAAACCTCACGTCCTTAACTGTGC...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CTGACCTGGTTTATCAGCCGGTGGAGTAAGCAAGTCCCGAATTTGAGGGTCCTTGGCTCCCTTTTCTGCTaGCCAATTTACGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: LTWFISRWSKQVPNLRVLGSLFC*PIYVHG
Trigger: ACCGTGCACGTAAATTGGTCAGCAGAAAAGGGAGCC...AAGGACCCTCAAATTCGGGACTTGCTTACTCCACCGGCTGATAAACCAGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR GCA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGGACTTCGGCAGGTTTTaGCCAGTCCATCATAATCCA +
Preference number: 4 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWDFGRF*PVHHNP
Trigger: TGGATTATGATGGACTGGGCAAAACCTGCCGAAGTC...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCATCAAAATGGGTCAGATaGACTTGCCTGTCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: WPRWQRGDHSASIALEVASKWVR*TCLSFR
Trigger: CCGAAAGGACAGGCAAGTGCATCTGACCCATTTTGA...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCGCTTTTCGAGTGATCTaGTTGCATCCTCGAAGGTCG +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSAFRVI*LHPRRS
Trigger: CGACCTTCGAGGATGCAAGCAGATCACTCGAAAAGC...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAAAGTCTGAGATGAAGTaGTCGCAGGCTTTTCGAGTG +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLKSEMK*SQAFRV
Trigger: CACTCGAAAAGCCTGCGAGCACTTCATCTCAGACTT...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCACCCCTCAGATCAATCTaGTACTCCCTTTTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: WPRWQRGDHSASIALEVAPLRSI*YSLFLR
Trigger: CCTAAGGAAAAGGGAGTAGCAGATTGATCTGAGGGG...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTCCCCTCAGATCAATCTaGTACTCCCTTTTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSPLRSI*YSLFLR
Trigger: CCTAAGGAAAAGGGAGTAGCAGATTGATCTGAGGGG...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGCTGCTGTTTGTAAGGTaGAGTCAAAAGATTCAGCAG +
Preference number: 4 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPLLFVR*SQKIQQ
Trigger: CTGCTGAATCTTTTGACTGCACCTTACAAACAGCAG...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TTGATTCCTACTGCCCACCGAAGATCAAGGGTCCTGAGAAGGGGGCAGCTGGAGTTAGGTGGGAACGGTTaGTTATGCAGTACACATAGC +
Preference number: 4 (lower is better)
Translates to: LIPTAHRRSRVLRRGQLELGGNG*LCSTHS
Trigger: GCTATGTGTACTGCATAACCAACCGTTCCCACCTAA...CTCCAGCTGCCCCCTTCTCAGGACCCTTGATCTTCGGTGGGCAGTAGGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR CCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCACTTGGGATCGCTGTTaGCAAGCTCCTCCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSTWDRC*QAPPAK
Trigger: TTTTGCTGGAGGAGCTTGCCAACAGCGATCCCAAGT...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAAAGCTTATCCCTTTTTaGCCACTGTACTATAGGAAC +
Preference number: 4 (lower is better)
Translates to: RESVMEERRALDTTRTWPKLIPF*PLYYRN
Trigger: GTTCCTATAGTACAGTGGCCAAAAAGGGATAAGCTT...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGACATTCCCAGCAATTTaGCAATTCTTCGTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLTFPAI*QFFVKQ
Trigger: TTGCTTAACGAAGAATTGCCAAATTGCTGGGAATGT...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCATGGTTTATCAGCCGGTaGAGTAAGCAAGTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: WPRWQRGDHSASIALEVAWFISR*SKQVPN
Trigger: ATTCGGGACTTGCTTACTCCACCGGCTGATAAACCA...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCTCAAACCTTCTCTTCTaGCTTTGGAGACCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSSNLLF*LWRPGV
Trigger: GACTCCCGGTCTCCAAAGCCAGAAGAGAAGGTTTGA...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCCATAGCGTCGTCGCATaGTACCACGCAATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTHSVVA*YHAISG
Trigger: GCCAGAGATTGCGTGGTACCATGCGACGACGCTATG...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCCTGCCTCTATTGCTTTaGAAGTGGCAAGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSLPLLL*KWQGCS
Trigger: ACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAG...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCACTAACTGAGGCACTCTaGAATAAGTCACTGGCATTT +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSLTEAL*NKSLAF
Trigger: AAATGCCAGTGACTTATTCCAGAGTGCCTCAGTTAG...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTCCCAAAAGAAACCATTaGCTTGGAAATTTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFPKRNH*LGNFCG
Trigger: TCCACAGAAATTTCCAAGCCAATGGTTTCTTTTGGG...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CTGACCTGGTTTATCAGCCGGTGGAGTAAGCAAGTCCCGAATTTGAGGGTCCTTAACCCAGCAAGGGCATaGTCCATCTGCTGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LTWFISRWSKQVPNLRVLNPARA*SICCLF
Trigger: GAAAAGGCAGCAGATGGACCATGCCCTTGCTGGGTT...AAGGACCCTCAAATTCGGGACTTGCTTACTCCACCGGCTGATAAACCAGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR TCA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTGTGTGTTCACGTCCATaGCATCCACCATGCGACGAC +
Preference number: 4 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPVCSRP*HPPCDD
Trigger: GTCGTCGCATGGTGGATGTCATGGACGTGAACACAC...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTCAAGATGGCATTTGTTaGTTCAGTCTGGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLQDGIC*FSLAFL
Trigger: AAGGAAAGCCAGACTGAATCAACAAATGCCATCTTG...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAAGAACATGTGACTGAGTaGGGCAGTCTGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: HMDQPSPLKTISPHSPKEEHVTE*GSLGAK
Trigger: CTTGGCACCCAGACTGCCTCACTCAGTCACATGTTC...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCAGCAAGTCCCGAATTTaGGGGTCCTTGATTCCTACT +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSSKSRI*GSLIPT
Trigger: AGTAGGAATCAAGGACCCTCAAATTCGGGACTTGCT...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCCGGAGATTCTGCTCTTaGGTTCTTGTCCAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSRRFCS*VLVQVR
Trigger: TCTCACTTGGACAAGAACTCAAGAGCAGAATCTCCG...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGATGGGTGTGTCTTAGCTaGTCTTCTGTATCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LQEEESLRLGYRKRARKGWVCLS*SSVSAS
Trigger: AGAAGCTGATACAGAAGATCAGCTAAGACACACCCA...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTTGGGTGTGTCTTAGCTaGTCTTCTGTATCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSWVCLS*SSVSAS
Trigger: AGAAGCTGATACAGAAGATCAGCTAAGACACACCCA...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCGGAAACCTAATTATGTaGACAAGCACGAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSGNLIM*TSTSAG
Trigger: CCCAGCACTCGTGCTTGTTCACATAATTAGGTTTCC...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACATAGGCTGCTCCCTCTaGGGACGTGCATCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHIGCSL*GRASWE
Trigger: TTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTAT...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp TTGATTCCTACTGCCCACCGAAGATCAAGGGTCCTGAGAAGGGGGCAGCTGGAGGGAAATTTCTGTGGATaGAATGTCCCAAAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LIPTAHRRSRVLRRGQLEGNFCG*NVPKSE
Trigger: CTCTGACTTTGGGACATTTCATCCACAGAAATTTCC...CTCCAGCTGCCCCCTTCTCAGGACCCTTGATCTTCGGTGGGCAGTAGGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR GCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCTGGCTTTCCTTCAAGTaGCTTGGCCACATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: HSASIALEVARVQLASLFWLSFK*LGHMLS
Trigger: AGACAACATGTGGCCAAGGCACTTGAAGGAAAGCCA...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCCTTGCACACAGGCTTTaGATTTTCGACATCGCACTC +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSLAHRL*IFDIAL
Trigger: GAGTGCGATGTCGAAAATGCAAAGCCTGTGTGCAAG...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAATGTGATGTCAAGGCCTaGCAGCCGGAAGTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKCDVKA*QPEVGH
Trigger: ATGACCGACTTCCGGCTGGCAGGCCTTGACATCACA...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GTGCTCGCAGGCTTTTCGAGTGATCTGCTTGCATCCTCGAAGGTCGATCAAGGTCCCCTCAGATCAATCTaGTACTCCCTTTTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: VLAGFSSDLLASSKVDQGPLRSI*YSLFLR
Trigger: CCTAAGGAAAAGGGAGTAGCAGATTGATCTGAGGGG...ACCTTGATCGACCTTCGAGGATGCAAGCAGATCACTCGAAAAGCCTGCGAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR GCA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCCTTGGCCCAGTCCTCTaGCGCCTCCAGCTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: YPYRGGAECKFASIIYKLLGPVL*RLQLGG
Trigger: TCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAG...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCTCATTTATAAGCTCTTaGCATAGGCTGCTGCTACTG +
Preference number: 4 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCSFISS*HRLLLL
Trigger: CAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGA...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TTGATTCCTACTGCCCACCGAAGATCAAGGGTCCTGAGAAGGGGGCAGCTGGAGAGAGGGGGAGCAGAGTaGAAATTTGCATCAATCATT +
Preference number: 4 (lower is better)
Translates to: LIPTAHRRSRVLRRGQLERGGAE*KFASII
Trigger: AATGATTGATGCAAATTTGCACTCTGCTCCCCCTCT...CTCCAGCTGCCCCCTTCTCAGGACCCTTGATCTTCGGTGGGCAGTAGGAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR GCA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGAGAGGGGGAGCAGAGTaGAAATTTGCATCAATCATT +
Preference number: 4 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWRGGAE*KFASII
Trigger: AATGATTGATGCAAATTTGCACTCTGCTCCCCCTCT...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTGGTTTTTCGCCCCGGTaGTTGGAAAGATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPGFSPR*LERWRQ
Trigger: CTGCCTCCATCTTTCCAAGCACCGGGGCGAAAAACC...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAGTGTCCACTGAGCCATaGTCATTTCAATGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLVSTEP*SFQCLS
Trigger: AGAAAGGCATTGAAATGACCATGGCTCAGTGGACAC...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGCATCTCATAGTAGAATaGATAGCGAAACTTATTTGG +
Preference number: 4 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLHLIVE*IAKLIW
Trigger: CCAAATAAGTTTCGCTATCCATTCTACTATGAGATG...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCAGCGCTCATCGCGGCTaGCACTGTGGTGGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: YPYRGGAECKFASIIYKLSAHRG*HCGGRW
Trigger: CCAGCGACCACCACAGTGCCAGCCGCGATGAGCGCT...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACATGCCACTGAGGGCCTaGGGCACAATGGCCTTACAC +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHMPLRA*GTMALH
Trigger: GTGTAAGGCCATTGTGCCCCAGGCCCTCAGTGGCAT...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATATCGGCCAGCAGGGGCTaGTCGCCTGCGGGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SNQRKRQEASNYRSLTIISASRG*SPAGAA
Trigger: CGCTGCTCCCGCAGGCGACCAGCCCCTGCTGGCCGA...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACCTTCTCTTCTGGCTTTaGAGACCGGGAGTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHLLFWL*RPGVGG
Trigger: GCCTCCGACTCCCGGTCTCCAAAGCCAGAAGAGAAG...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCATCTTCGGTTTTTCCGTaGATCAACCCAGTATCCAGA +
Preference number: 4 (lower is better)
Translates to: WPRWQRGDHSASIALEVASSVFP*INPVSR
Trigger: TCTGGATACTGGGTTGATCCACGGAAAAACCGAAGA...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCATAGCGTCGTCGCATaGTACCACGCAATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPHSVVA*YHAISG
Trigger: GCCAGAGATTGCGTGGTACCATGCGACGACGCTATG...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACGACACCACAAGAACCTaGCCATGGAGACAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHDTTRT*PWRQGR
Trigger: ACGGCCCTGTCTCCATGGCCAGGTTCTTGTGGTGTC...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCCAAAACTGGCCTAGGTaGCAAAGAGGGGACCACTCT +
Preference number: 4 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTQNWPR*QRGDHS
Trigger: AGAGTGGTCCCCTCTTTGCCACCTAGGCCAGTTTTG...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCTTTACATCAGCAATaGGAGCATCTTCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGSLHQQ*EHLHLL
Trigger: TAGAAGATGAAGATGCTCTCATTGCTGATGTAAAGA...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAGTTGATGGACAAGTCTaGGATGAAGTGCTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKVDGQV*DEVLAG
Trigger: GCCTGCGAGCACTTCATCTCAGACTTGTCCATCAAC...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp GCTGGGTGTGTCTTAGCTGATCTTCTGTATCAGCTTCTCGTCAGACAGGCAGTAGGGACACATTTCTTGTaGAGTGGCAGAGACTCCAAC +
Preference number: 4 (lower is better)
Translates to: AGCVLADLLYQLLVRQAVGTHFL*SGRDSN
Trigger: GTTGGAGTCTCTGCCACTGCACAAGAAATGTGTCCC...TACTGCCTGTCTGACGAGAAGCTGATACAGAAGATCAGCTAAGACACACCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR GCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTCAATTTATTGCAACCTaGCATATTGAGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLQFIAT*HIELCE
Trigger: CTCACAGAGCTCAATATGGCAGGTTGCAATAAATTG...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCCAAAAAGCTCTCTGCTaGCCTAGAGAGAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: HSASIALEVARVQLASLFQKALC*PRERIF
Trigger: AAAGATCCTCTCTCTAGGGCAGCAGAGAGCTTTTTG...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGACTGCATCTCCAAGATaGCATTTGTTGATTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLTASPR*HLLIQS
Trigger: AGACTGAATCAACAAATGCCATCTTGGAGATGCAGT...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGAACATTTCTTGTGCAGTaGCAGAGACTCCAACTTATC +
Preference number: 4 (lower is better)
Translates to: LQEEESLRLGYRKRARKGTFLVQ*QRLQLI
Trigger: GATAAGTTGGAGTCTCTGCCACTGCACAAGAAATGT...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GTGCTCGCAGGCTTTTCGAGTGATCTGCTTGCATCCTCGAAGGTCGATCAAGGTCATCTTCTATCCCTGTaGGGACACATTTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: VLAGFSSDLLASSKVDQGHLLSL*GHISCA
Trigger: TGCACAAGAAATGTGTCCCCACAGGGATAGAAGATG...ACCTTGATCGACCTTCGAGGATGCAAGCAGATCACTCGAAAAGCCTGCGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR CCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAAAGGAACCCGCACCTTTaGCCGAGTGGGGAATTTAAG +
Preference number: 4 (lower is better)
Translates to: HMDQPSPLKTISPHSPKERNPHL*PSGEFK
Trigger: CTTAAATTCCCCACTCGGCCAAAGGTGCGGGTTCCT...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAAGGAACCCGCACCTTTaGCCGAGTGGGGAATTTAAG +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKRNPHL*PSGEFK
Trigger: CTTAAATTCCCCACTCGGCCAAAGGTGCGGGTTCCT...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATACACGGGCCCAGCCGCTaGGAAGGTGCTCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SNQRKRQEASNYRSLTIIHGPSR*EGAPRA
Trigger: GGCTCTCGGAGCACCTTCCCAGCGGCTGGGCCCGTG...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAAAACAAGCACGAGTGCTaGGCAGAACCAAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: HMDQPSPLKTISPHSPKENKHEC*AEPSSR
Trigger: CCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTT...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCATCTGGAATAAGTCACTaGCATTTCCTCAAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSSGISH*HFLKVS
Trigger: TGAAACTTTGAGGAAATGCCAGTGACTTATTCCAGA...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CAA 72 bp CTATTGACGAGCCATGTCAGTTGCTTTTTAGAGATGTaGGTCCAACTGAGGTCAAGGCTGACTGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LLTSHVSCFLEM*VQLRSRLTGCL
Trigger: GAGGCAGCCAGTCAGCCTTGACCTCAGTTGGACCAACATCTCTAAAAAGCAACTGACATGGCTCGTCAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR TCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAATTGAGCTCAATGCGCTaGCAATCTGATACCCGGTCA +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKLSSMR*QSDTRS
Trigger: TGACCGGGTATCAGATTGTCAGCGCATTGAGCTCAA...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAAGGTATAGCCCTGCTTaGGCTCAATGCGCTGACAAT +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKRYSPA*AQCADN
Trigger: ATTGTCAGCGCATTGAGCTCAAGCAGGGCTATACCT...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CAATTTATTGCAACCTGCCATATTGAGCTCTGTGAGAGAGTAGCGAGTGGAAGATCCAGCCTGAGGGAATaGCGAAGGTATAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QFIATCHIELCERVASGRSSLRE*RRYSPA
Trigger: AGCAGGGCTATACCTTCGTCATTCCCTCAGGCTGGA...TCTTCCACTCGCTACTCTCTCACAGAGCTCAATATGGCAGGTTGCAATAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR TCA 90 bp ATTACACAAATATCACCCATTCCCACGTGTCAGAGGAAAGATGTCCTTGCTCTCGAACATGTGACTGAGTaGGGCAGTCTGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: ITQISPIPTCQRKDVLALEHVTE*GSLGAK
Trigger: CTTGGCACCCAGACTGCCTCACTCAGTCACATGTTC...GAGAGCAAGGACATCTTTCCTCTGACACGTGGGAATGGGTGATATTTGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR TCA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTTGTGTCTCTTCATTCTaGTCCACCTCTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPCVSSF*STSPQR
Trigger: CCTCTGTGGAGAGGTGGATCAGAATGAAGAGACACA...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTAGATACAGCATTCCATaGGTTTCTTCTCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: APRQHSLCFPLRSICYSLRYSIP*VSSQSL
Trigger: AAGACTTTGAGAAGAAACTCATGGAATGCTGTATCT...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAGAATTTGAGGGTCCTTaGTTCCTACTGCCCACCGAA +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKEFEGP*FLLPTE
Trigger: TTCGGTGGGCAGTAGGAATCAAGGACCCTCAAATTC...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCAGTTCCAGCTCCTCTaGAGAGCTTCAACCCCAATA +
Preference number: 4 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPQFQLL*RASTPI
Trigger: TATTGGGGTTGAAGCTCTTCAGAGGAGCTGGAACTG...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTATAGGCTGCTGCTACTaGGCATCTCCTCACACACTT +
Preference number: 4 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPIGCCY*ASPHTL
Trigger: AAGTGTGTGAGGAGATGCTCAGTAGCAGCAGCCTAT...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCCTCAATGTGTCAACTaGGATAGCATAAGACTTATC +
Preference number: 4 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWPQCVN*DSIRLI
Trigger: GATAAGTCTTATGCTATCTCAGTTGACACATTGAGG...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR GCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCTGCACTTTAGGGTACTaGATCTCCAAGATGGCATTT +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSCTLGY*ISKMAF
Trigger: AAATGCCATCTTGGAGATGCAGTACCCTAAAGTGCA...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTATTAGACAGTACTTCTaGACTTTAGGGTACTGCATC +
Preference number: 4 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSIRQYF*TLGYCI
Trigger: GATGCAGTACCCTAAAGTGCAGAAGTACTGTCTAAT...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCGTGAGGCAGTCTGGGTaGCAAGCACTGTCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: YPYRGGAECKFASIIYKLVRQSG*QALSED
Trigger: GTCCTCCGACAGTGCTTGGCACCCAGACTGCCTCAC...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAGTCCTTGATTCCTACTaGCCACCGAAGATCAAGGGT +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKVLDSY*PPKIKG
Trigger: ACCCTTGATCTTCGGTGGGCAGTAGGAATCAAGGAC...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGATTTGTTGATTCAGTCTaGCTTTCCTTCAAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LQEEESLRLGYRKRARKGFVDSV*LSFKCL
Trigger: AAGGCACTTGAAGGAAAGCCAGACTGAATCAACAAA...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CTTCAGGAAGAGGAAAGCCTGAGACTGGGCTACAGGAAGAGGGCCAGAAAGGGAACTGCATCTCCAAGATaGCATTTGTTGATTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LQEEESLRLGYRKRARKGTASPR*HLLIQS
Trigger: AGACTGAATCAACAAATGCCATCTTGGAGATGCAGT...TCCCTTTCTGGCCCTCTTCCTGTAGCCCAGTCTCAGGCTTTCCTCTTCCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACAGGAACCCGCACCTTTaGCCGAGTGGGGAATTTAAG +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHRNPHL*PSGEFK
Trigger: CTTAAATTCCCCACTCGGCCAAAGGTGCGGGTTCCT...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp ATTACACAAATATCACCCATTCCCACGTGTCAGAGGAAAGATGTCCTTGCTCTCACAATGGATGTCCCGTaGAGCTCTTTGGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: ITQISPIPTCQRKDVLALTMDVP*SSLVGL
Trigger: GAGGCCCACCAAAGAGCTCCACGGGACATCCATTGT...GAGAGCAAGGACATCTTTCCTCTGACACGTGGGAATGGGTGATATTTGTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR CCA 90 bp CTGACCTGGTTTATCAGCCGGTGGAGTAAGCAAGTCCCGAATTTGAGGGTCCTTTCTTCGGTTTTTCCGTaGATCAACCCAGTATCCAGA +
Preference number: 4 (lower is better)
Translates to: LTWFISRWSKQVPNLRVLSSVFP*INPVSR
Trigger: TCTGGATACTGGGTTGATCCACGGAAAAACCGAAGA...AAGGACCCTCAAATTCGGGACTTGCTTACTCCACCGGCTGATAAACCAGGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR CCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAACAAGAACCTGGCCATaGAGACAGGGCCGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKTRTWP*RQGRFL
Trigger: AAGAAAACGGCCCTGTCTCCATGGCCAGGTTCTTGT...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR TCA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAAGATACAGCATTCCATaGGTTTCTTCTCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLRYSIP*VSSQSL
Trigger: AAGACTTTGAGAAGAAACTCATGGAATGCTGTATCT...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAACTTGCACACAGGCTTTaGATTTTCGACATCGCACTC +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKLAHRL*IFDIAL
Trigger: GAGTGCGATGTCGAAAATGCAAAGCCTGTGTGCAAG...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR GCA 90 bp ATTACACAAATATCACCCATTCCCACGTGTCAGAGGAAAGATGTCCTTGCTCTCTCAAGGCTGACTGGCTaGCTCTTGATGATGCCACTG +
Preference number: 4 (lower is better)
Translates to: ITQISPIPTCQRKDVLALSRLTG*LLMMPL
Trigger: CAGTGGCATCATCAAGAGGCAGCCAGTCAGCCTTGA...GAGAGCAAGGACATCTTTCCTCTGACACGTGGGAATGGGTGATATTTGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR GCA 90 bp GCTGGGTGTGTCTTAGCTGATCTTCTGTATCAGCTTCTCGTCAGACAGGCAGTACAAAAAGCTCTCTGCTaGCCTAGAGAGAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: AGCVLADLLYQLLVRQAVQKALC*PRERIF
Trigger: AAAGATCCTCTCTCTAGGGCAGCAGAGAGCTTTTTG...TACTGCCTGTCTGACGAGAAGCTGATACAGAAGATCAGCTAAGACACACCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR GCA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCGCTGACCAATTTACGTaGACGGTAAAAATGCATGTT +
Preference number: 4 (lower is better)
Translates to: HSASIALEVARVQLASLFADQFT*TVKMHV
Trigger: AACATGCATTTTTACCGTGCACGTAAATTGGTCAGC...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCGCTGACCAATTTACGTaGACGGTAAAAATGCATGTT +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSADQFT*TVKMHV
Trigger: AACATGCATTTTTACCGTGCACGTAAATTGGTCAGC...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCATTCACAGTGAAGTCTaGATCCGGCATTTTTATTCC +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSIHSEV*IRHFYS
Trigger: GGAATAAAAATGCCGGATCCAGACTTCACTGTGAAT...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAACCTTCAAGCTCAAAATaGGTCAGATGCACTTGCCTG +
Preference number: 4 (lower is better)
Translates to: HMDQPSPLKTISPHSPKEPSSSK*VRCTCL
Trigger: CAGGCAAGTGCATCTGACCCATTTTGAGCTTGAAGG...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACACTTGGGATCGCTGTTaGCAAGCTCCTCCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHTWDRC*QAPPAK
Trigger: TTTTGCTGGAGGAGCTTGCCAACAGCGATCCCAAGT...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGACATTCCCAGCAATTTaGCAATTCTTCGTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWTFPAI*QFFVKQ
Trigger: TTGCTTAACGAAGAATTGCCAAATTGCTGGGAATGT...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp ATTACACAAATATCACCCATTCCCACGTGTCAGAGGAAAGATGTCCTTGCTCTCAAATGGGTGTGTCCCTaGGGTAGACAGTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ITQISPIPTCQRKDVLALKWVCP*GRQFQL
Trigger: GAGCTGGAACTGTCTACCCCAGGGACACACCCATTT...GAGAGCAAGGACATCTTTCCTCTGACACGTGGGAATGGGTGATATTTGTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR CCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAAGTCTCAGAATCCACTTaGGTAGCAACGAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: HMDQPSPLKTISPHSPKEVSEST*VATKWV
Trigger: CACCCATTTCGTTGCTACCCAAGTGGATTCTGAGAC...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATACTGGAGGAGCCTGGCTaGGAGGCAGGTTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SNQRKRQEASNYRSLTIILEEPG*EAGWGL
Trigger: CAAGCCCCAACCTGCCTCCCAGCCAGGCTCCTCCAG...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCGGGCCTGGAGACCAATaGAAGTGGGCAGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: YPYRGGAECKFASIIYKLGPGDQ*KWAEGH
Trigger: ATGACCCTCTGCCCACTTCCATTGGTCTCCAGGCCC...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACAGCAAGTCCCGAATTTaGGGGTCCTTGATTCCTACT +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHSKSRI*GSLIPT
Trigger: AGTAGGAATCAAGGACCCTCAAATTCGGGACTTGCT...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCGCATGTGGCGAATTATaGGGCGAAGCGTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: YPYRGGAECKFASIIYKLACGEL*GEAWHL
Trigger: CAGATGCCACGCTTCGCCTCATAATTCGCCACATGC...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCAAATCCGGATTTACTTaGATATTCTGGAATCTCCCA +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSKSGFT*IFWNLP
Trigger: TGGGAGATTCCAGAATATTCAAGTAAATCCGGATTT...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR GCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATAACCCCCTTCCATGGCTaGAGGCAGAGGGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SNQRKRQEASNYRSLTIITPFHG*RQRAGD
Trigger: GTCACCAGCCCTCTGCCTGCAGCCATGGAAGGGGGT...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACAAGAGGGGACCACTCTaGCTCTATTGCTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHKRGPL*LYCFGS
Trigger: ACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTT...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATAGCGAAACTTATTTaGAACCCGTGTCCGATCTTC +
Preference number: 4 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTIAKLI*NPCPIF
Trigger: GAAGATCGGACACGGGTTCCAAATAAGTTTCGCTAT...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCGACAGGAGGGGCATGTaGCGAATTATGAGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: YPYRGGAECKFASIIYKLDRRGM*RIMRRS
Trigger: GCTTCGCCTCATAATTCGCCACATGCCCCTCCTGTC...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CAATTTATTGCAACCTGCCATATTGAGCTCTGTGAGAGAGTAGCGAGTGGAAGACTGCCTCTATTGCTTTaGAAGTGGCAAGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: QFIATCHIELCERVASGRLPLLL*KWQGCS
Trigger: ACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAG...TCTTCCACTCGCTACTCTCTCACAGAGCTCAATATGGCAGGTTGCAATAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398645.6
3UTR CAA 72 bp TTTCAGTCCTGGCAGCCTATTGACGAGCCATGTCAGTaGCTTTTTAGAGATGTTGGTCCAACTGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: FQSWQPIDEPCQ*LFRDVGPTEVK
Trigger: CTTGACCTCAGTTGGACCAACATCTCTAAAAAGCAACTGACATGGCTCGTCAATAGGCTGCCAGGACTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR TCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAACTCCAAATCCATGCTaGGGGACTCTTTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKTPNPC*GTLSEI
Trigger: AATTTCAGAAAGAGTCCCTCAGCATGGATTTGGAGT...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAAACTCCAAATCCATGCTaGGGGACTCTTTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: HMDQPSPLKTISPHSPKETPNPC*GTLSEI
Trigger: AATTTCAGAAAGAGTCCCTCAGCATGGATTTGGAGT...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAAGGAAATTTCTGTGGATaGAATGTCCCAAAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: HMDQPSPLKTISPHSPKEGNFCG*NVPKSE
Trigger: CTCTGACTTTGGGACATTTCATCCACAGAAATTTCC...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CTGACCTGGTTTATCAGCCGGTGGAGTAAGCAAGTCCCGAATTTGAGGGTCCTTTTTCATCATCTGAAATaGCATCATCTTCATAGCGTC +
Preference number: 4 (lower is better)
Translates to: LTWFISRWSKQVPNLRVLFHHLK*HHLHSV
Trigger: GACGCTATGAAGATGATGGCATTTCAGATGATGAAA...AAGGACCCTCAAATTCGGGACTTGCTTACTCCACCGGCTGATAAACCAGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR CCA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCCATCTCATAGTAGAATaGATAGCGAAACTTATTTGG +
Preference number: 4 (lower is better)
Translates to: LDSTACAFPSDQSATPFSHLIVE*IAKLIW
Trigger: CCAAATAAGTTTCGCTATCCATTCTACTATGAGATG...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACCTCAAGCCACCCCGCTaGATATACTCTACATTAAAA +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHLKPPR*IYSTLK
Trigger: TTTTAATGTAGAGTATATTCAGCGGGGTGGCTTGAG...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCGCACAGTTAAGGACGTaGGGTTTGGGAGATCTCAAC +
Preference number: 4 (lower is better)
Translates to: YPYRGGAECKFASIIYKLAQLRT*GLGDLN
Trigger: GTTGAGATCTCCCAAACCTCACGTCCTTAACTGTGC...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAATTAGACAGTACTTCTaGACTTTAGGGTACTGCATC +
Preference number: 4 (lower is better)
Translates to: NYVNKHECWAEPSSRERKIRQYF*TLGYCI
Trigger: GATGCAGTACCCTAAAGTGCAGAAGTACTGTCTAAT...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACACGAGCCATGTCAGTTaGTTTTTAGAGATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHTSHVS*FLEMLV
Trigger: GACCAACATCTCTAAAAAGCAACTGACATGGCTCGT...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACAATTCCTTAGTTAGGTaGGAACGGTTGGTTATGCAG +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHNSLVR*ERLVMQ
Trigger: CTGCATAACCAACCGTTCCCACCTAACTAAGGAATT...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAACCCAAAAGAAACCATTaGCTTGGAAATTTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: HMDQPSPLKTISPHSPKEPKRNH*LGNFCG
Trigger: TCCACAGAAATTTCCAAGCCAATGGTTTCTTTTGGG...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CAA 72 bp TATCACCCATTCCCACGTGTCAGAGGAAAGATGTCCTaGCTCTCTCTAAAACCAATAGTGGAGAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: YHPFPRVRGKMS*LSLKPIVENFW
Trigger: CCAAAAGTTCTCCACTATTGGTTTTAGAGAGAGCAAGGACATCTTTCCTCTGACACGTGGGAATGGGTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR TCA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCTGGAGGCAGCCAGGATaGACAATCTCATTGCAGATA +
Preference number: 4 (lower is better)
Translates to: YPYRGGAECKFASIIYKLWRQPG*TISLQI
Trigger: TATCTGCAATGAGATTGTTCATCCTGGCTGCCTCCA...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCTGGCTTTCCTTCAAGTaGCTTGGCCACATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: YPYRGGAECKFASIIYKLWLSFK*LGHMLS
Trigger: AGACAACATGTGGCCAAGGCACTTGAAGGAAAGCCA...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATATGTGATGTCAAGGCCTaGCAGCCGGAAGTCGGTCAT +
Preference number: 4 (lower is better)
Translates to: SNQRKRQEASNYRSLTIICDVKA*QPEVGH
Trigger: ATGACCGACTTCCGGCTGGCAGGCCTTGACATCACA...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATAGCAGCTTGGGCACAATaGATGTCCCGTGGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SNQRKRQEASNYRSLTIIAAWAQ*MSRGAL
Trigger: AAGAGCTCCACGGGACATCCATTGTGCCCAAGCTGC...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529006.7
3UTR CAA 72 bp ATCAGTATCCTTACAGAGGGGGAGCAGAGTGCAAATTaGCATCAATCATTTATAAGCTCTTGCCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: ISILTEGEQSAN*HQSFISSCHRL
Trigger: CAGCCTATGGCAAGAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATACTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATAAGATCGGTTTCCTGTTaGATCTGGGCTGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SNQRKRQEASNYRSLTIIRSVSC*IWAGCV
Trigger: GACACACCCAGCCCAGATTCAACAGGAAACCGATCT...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACTTTCATCATCTGAAATaGCATCATCTTCATAGCGTC +
Preference number: 4 (lower is better)
Translates to: QSFISSCHRLLLLSISSHFHHLK*HHLHSV
Trigger: GACGCTATGAAGATGATGGCATTTCAGATGATGAAA...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATAGGACAGGCCGTTCAATaGAAAGTAAAAGGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SNQRKRQEASNYRSLTIIGQAVQ*KVKGGS
Trigger: GCTGCCCCCTTTTACTTTGCATTGAACGGCCTGTCC...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR TCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATACATCATAATCCAGGTTaGCTCCATTCGCTACAGGGC +
Preference number: 4 (lower is better)
Translates to: SNQRKRQEASNYRSLTIIHHNPG*LHSLQG
Trigger: GCCCTGTAGCGAATGGAGTCAACCTGGATTATGATG...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCTCATTTATAAGCTCTTaGCATAGGCTGCTGCTACTG +
Preference number: 4 (lower is better)
Translates to: YPYRGGAECKFASIIYKLSFISS*HRLLLL
Trigger: CAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGA...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR GCA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCATTTATACCACGTCTTaGACACTCGCATACATTCAC +
Preference number: 4 (lower is better)
Translates to: YPYRGGAECKFASIIYKLIYTTS*TLAYIH
Trigger: GTGAATGTATGCGAGTGTGCAAGACGTGGTATAAAT...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR GCA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCCAATTTATTGCAACCTaGCATATTGAGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: YPYRGGAECKFASIIYKLQFIAT*HIELCE
Trigger: CTCACAGAGCTCAATATGGCAGGTTGCAATAAATTG...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
3UTR CAA 72 bp GCTTCCAATTATAGGTCATTAACGATAATAAGGTTTTaGCTCAATACCCAGGGTTCTTTACAGAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ASNYRSLTIIRF*LNTQGSLQRSS
Trigger: GGAACTTCTCTGTAAAGAACCCTGGGTATTGAGCAAAAACCTTATTATCGTTAATGACCTATAATTGGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CCA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATATCTGGAATAAGTCACTaGCATTTCCTCAAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: SNQRKRQEASNYRSLTIISGISH*HFLKVS
Trigger: TGAAACTTTGAGGAAATGCCAGTGACTTATTCCAGA...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS CCA 90 bp GCGTCCCCTGCCCAGGAAAGACAGAGCGGCCACGGGCCCAGCCGCTaGGAAGGTGCTCCGAGAGCCGCCGCCGCCGCCGCCGCTGCCGGG +
Preference number: 5 (lower is better)
Translates to: ASPAQERQSGHGPSR*EGAPRAAAAAAAAG
Trigger: CCCGGCAGCGGCGGCGGCGGCGGCGGCTCTCGGAGCACCTTCCCAGCGGCTGGGCCCGTGGCCGCTCTGTCTTTCCTGGGCAGGGGACGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCCTGGGGATCCCACACTaGTCCATTGTGGGAGCCCCG +
Preference number: 5 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSLGIPH*SIVGAP
Trigger: CGGGGCTCCCACAATGGACAAGTGTGGGATCCCCAG...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCTGCCGGGGAGGGGTGTaGTTTCCCTCACACAGGAGG +
Preference number: 5 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSCRGGV*FPSHRR
Trigger: CCTCCTGTGTGAGGGAAACAACACCCCTCCCCGGCA...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS GCA 90 bp GGGCAGTCCAGCTCTGACCCTTCAGACTACCCAGAGGGAGCAGCGTaGAGCGCTCTGGGCTCCTTCTCGAGCCCTTCAGCTCAGCCGCGG +
Preference number: 5 (lower is better)
Translates to: GQSSSDPSDYPEGAA*SALGSFSSPSAQPR
Trigger: CCGCGGCTGAGCTGAAGGGCTCGAGAAGGAGCCCAGAGCGCTGCACGCTGCTCCCTCTGGGTAGTCTGAAGGGTCAGAGCTGGACTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR CAA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGAGGGGCCGCAGGACTTaGGCTTGCACAGCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLRGRRT*ACTASS
Trigger: CGAAGAAGCTGTGCAAGCCAAAGTCCTGCGGCCCCT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCAGCAACTGCCGCCGTTaGAAGCGCTCATCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGSNCRR*KRSSRL
Trigger: CAGCCGCGATGAGCGCTTCAAACGGCGGCAGTTGCT...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCAGCAACTGCCGCCGTTaGAAGCGCTCATCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSSNCRR*KRSSRL
Trigger: CAGCCGCGATGAGCGCTTCAAACGGCGGCAGTTGCT...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCTCTGCCGCCTCCAGCTaGGGGGAGATAGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPSAASS*GEIGCS
Trigger: GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGA...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS CCA 90 bp GCTCTGACCCTTCAGACTACCCAGAGGGAGCAGCGTGCAGCGCTCTaGGCTCCTTCTCGAGCCCTTCAGCTCAGCCGCGGCTTCCTGTGC +
Preference number: 5 (lower is better)
Translates to: ALTLQTTQREQRAAL*APSRALQLSRGFLC
Trigger: GCACAGGAAGCCGCGGCTGAGCTGAAGGGCTCGAGAAGGAGCCCAGAGCGCTGCACGCTGCTCCCTCTGGGTAGTCTGAAGGGTCAGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR CAA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGGTGGGGACACATTTCTaGTGCAGTGGCAGAGACTCC +
Preference number: 5 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLVGTHF*CSGRDS
Trigger: GGAGTCTCTGCCACTGCACAAGAAATGTGTCCCCAC...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCCCAGTGAGGGCTAACTaGGGATCGCTGTTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSPVRAN*GSLLAS
Trigger: GCTTGCCAACAGCGATCCCAAGTTAGCCCTCACTGG...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCAGTCCTGGCAGCCTATaGACGAGCCATGTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSSPGSL*TSHVSC
Trigger: GCAACTGACATGGCTCGTCAATAGGCTGCCAGGACT...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS GCA 90 bp CTCTGGGCTCCTTCTCGAGCCCTTCAGCTCAGCCGCGGCTTCCTGTaGCTGCGAACAATGCTGCTGCGTCACCCACATGCAGCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: LWAPSRALQLSRGFL*LRTMLLRHPHAAPR
Trigger: TCTGGGAGCTGCATGTGGGTGACGCAGCAGCATTGTTCGCAGGCACAGGAAGCCGCGGCTGAGCTGAAGGGCTCGAGAAGGAGCCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR CAA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCAACTTGGGATCGCTGTaGGCAAGCTCCTCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSNLGSL*ASSSSK
Trigger: TTTGCTGGAGGAGCTTGCCAACAGCGATCCCAAGTT...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCTCAGACAGCTCCTTTTaGCCGCTGGGATTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSSDSSF*PLGLFS
Trigger: GGAGAACAATCCCAGCGGCAAAAAGGAGCTGTCTGA...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCAGTCCTGGCAGCCTATaGACGAGCCATGTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSSPGSL*TSHVSC
Trigger: GCAACTGACATGGCTCGTCAATAGGCTGCCAGGACT...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGATGGGCCCCCTGGCGTaGCCCCTCCTCCCGGAGCGT +
Preference number: 5 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWMGPLA*PLLPER
Trigger: ACGCTCCGGGAGGAGGGGCAACGCCAGGGGGCCCAT...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS GCA 90 bp CTGGGATTGTTCTCCTTTTCCCGTACCATGGTGCGCTCTGTGGCCTaGAGCCGCAGCAACTGCCGCCGTTTGAAGCGCTCATCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: LGLFSFSRTMVRSVA*SRSNCRRLKRSSRL
Trigger: CAGCCGCGATGAGCGCTTCAAACGGCGGCAGTTGCTGCGGCTGCAGGCCACAGAGCGCACCATGGTACGGGAAAAGGAGAACAATCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS GCA 90 bp GGGCTCCTTCTCGAGCCCTTCAGCTCAGCCGCGGCTTCCTGTGCCTaGGAACAATGCTGCTGCGTCACCCACATGCAGCTCCCAGAAATG +
Preference number: 5 (lower is better)
Translates to: GLLLEPFSSAAASCA*EQCCCVTHMQLPEM
Trigger: CATTTCTGGGAGCTGCATGTGGGTGACGCAGCAGCATTGTTCGCAGGCACAGGAAGCCGCGGCTGAGCTGAAGGGCTCGAGAAGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR CAA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCAACTTGGGATCGCTGTaGGCAAGCTCCTCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGNLGSL*ASSSSK
Trigger: TTTGCTGGAGGAGCTTGCCAACAGCGATCCCAAGTT...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp GCAGGTTGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTCAGACAGCTCCTTTTaGCCGCTGGGATTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: AGWGLAQSSAASSLGEIGSDSSF*PLGLFS
Trigger: GGAGAACAATCCCAGCGGCAAAAAGGAGCTGTCTGA...GCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCAACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGTACGATCCCCGGATCTaGGCTTTCTCAACTTCAGAC +
Preference number: 5 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLYDPRI*AFSTSD
Trigger: GTCTGAAGTTGAGAAAGCCAAGATCCGGGGATCGTA...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGTCTGCCGCCTCCAGCTaGGGGGAGATAGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPSAASS*GEIGCS
Trigger: GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGA...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGGAGCTGCCGAGGCTCTaGGTGAAGTTTCCCCAGCGT +
Preference number: 5 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLELPRL*VKFPQR
Trigger: ACGCTGGGGAAACTTCACCAAGAGCCTCGGCAGCTC...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR CAA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTTCCCACACTTGTCCATaGTGGGAGCCCCGGCTACAG +
Preference number: 5 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFSHTCP*WEPRLQ
Trigger: CTGTAGCCGGGGCTCCCACAATGGACAAGTGTGGGA...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGAACACCACACTCTCCTaGCACACAGGCTTTGCATTT +
Preference number: 5 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLNTTLS*HTGFAF
Trigger: AAATGCAAAGCCTGTGTGCAAGGAGAGTGTGGTGTT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCAAGCAAGTCCCGAATTaGAGGGTCCTTGATTCCTAC +
Preference number: 5 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSKQVPN*RVLDSY
Trigger: GTAGGAATCAAGGACCCTCAAATTCGGGACTTGCTT...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp AGAGCCCGGCCTCCTGGCAGGCGAGTAAGCGAGCAGGCGCCTCGACAGCACAGCTGTCTCAGAATCCACTaGGGTAGCAACGAAATGGGT +
Preference number: 5 (lower is better)
Translates to: RARPPGRRVSEQAPRQHSCLRIH*GSNEMG
Trigger: ACCCATTTCGTTGCTACCCAAGTGGATTCTGAGACA...GCTGTGCTGTCGAGGCGCCTGCTCGCTTACTCGCCTGCCAGGAGGCCGGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCTTCAACCCCAGATTATaGGGGCCTGGAGACCAATGG +
Preference number: 5 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPFNPRL*GPGDQW
Trigger: CCATTGGTCTCCAGGCCCCAATAATCTGGGGTTGAA...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS CCA 90 bp GAGGAGGCCGTGATGGCCTGCAGCTTGGGCACAATGGATGTCCCGTaGAGCTCTTTGGTGGGCCTCTGTAGCGTGACAGTGAGGTACGAT +
Preference number: 5 (lower is better)
Translates to: EEAVMACSLGTMDVP*SSLVGLCSVTVRYD
Trigger: ATCGTACCTCACTGTCACGCTACAGAGGCCCACCAAAGAGCTCCACGGGACATCCATTGTGCCCAAGCTGCAGGCCATCACGGCCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS-3UTR CAA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGGTGATGGCCTGCAGCTaGGGCACAATGGATGTCCCG +
Preference number: 5 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPVMACS*GTMDVP
Trigger: CGGGACATCCATTGTGCCCAAGCTGCAGGCCATCAC...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGTGCTTTTTAGAGATGTaGGTCCAACTGAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLCFLEM*VQLRSR
Trigger: CCTTGACCTCAGTTGGACCAACATCTCTAAAAAGCA...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTGCCGGGGAGGGGTGTaGTTTCCCTCACACAGGAGG +
Preference number: 5 (lower is better)
Translates to: APRQHSLCFPLRSICYSLCRGGV*FPSHRR
Trigger: CCTCCTGTGTGAGGGAAACAACACCCCTCCCCGGCA...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGTTTTCGCCCCGGTGCTaGGAAAGATGGAGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGFSPRC*ERWRQG
Trigger: CCCCTGCCTCCATCTTTCCAAGCACCGGGGCGAAAA...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS GCA 90 bp GTGAGAGGCTCATCGCAGCTCCGCAGGGGCCGCAGGACTTTGGCTTaGACAGCTTCTTCGTCACTCTCTTCCATTTTCCGCTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: VRGSSQLRRGRRTLA*TASSSLSSIFRFWA
Trigger: AGCCCAGAAGCGGAAAATGGAAGAGAGTGACGAAGAAGCTGTGCAAGCCAAAGTCCTGCGGCCCCTGCGGAGCTGCGATGAGCCTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CCA 90 bp CTTGCACACAGGCTTTGCATTTTCGACATCGCACTCGTCTCCGTCTaGCTCCTGACACAATCGGGGAGGCAGCAGCTGGCCTCACAGGTG +
Preference number: 5 (lower is better)
Translates to: LAHRLCIFDIALVSV*LLTQSGRQQLASQV
Trigger: CACCTGTGAGGCCAGCTGCTGCCTCCCCGATTGTGTCAGGAGCCAGACGGAGACGAGTGCGATGTCGAAAATGCAAAGCCTGTGTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000529124.1
ENST00000530342.2
ENST00000531696.5
CDS-3UTR CAA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGATGGGTCAGATGCACTaGCCTGTCCTTTCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPMGQMH*PVLSGS
Trigger: GCTCCCCGAAAGGACAGGCAAGTGCATCTGACCCAT...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTAGCAACTGCCGCCGTTaGAAGCGCTCATCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSSNCRR*KRSSRL
Trigger: CAGCCGCGATGAGCGCTTCAAACGGCGGCAGTTGCT...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGTCCCGTGGAGCTCTTaGGTGGGCCTCTGTAGCGTG +
Preference number: 5 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSVPWSS*VGLCSV
Trigger: CACGCTACAGAGGCCCACCAAAGAGCTCCACGGGAC...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTTTCTTCCCTGGGAGTTaGCTCAGAACCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFFFPGS*LRTRHC
Trigger: GCAGTGCCTGGTTCTGAGCAAACTCCCAGGGAAGAA...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGGTGGCAAGGGTGCAGTaGGCGTCTCTCTTCTCAGTG +
Preference number: 5 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPVARVQ*ASLFSV
Trigger: CACTGAGAAGAGAGACGCCAACTGCACCCTTGCCAC...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGTTTTCGCCCCGGTGCTaGGAAAGATGGAGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLFSPRC*ERWRQG
Trigger: CCCCTGCCTCCATCTTTCCAAGCACCGGGGCGAAAA...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGTTGGCATTATATTTGTaGGTGTGCAGTTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLLALYL*VCSFSS
Trigger: GGAAGAGAAACTGCACACCAACAAATATAATGCCAA...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGCCGCAGGACTTTGGCTaGCACAGCTTCTTCGTCACT +
Preference number: 5 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGPQDFG*HSFFVT
Trigger: AGTGACGAAGAAGCTGTGCAAGCCAAAGTCCTGCGG...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGAGTCCTGGCAGCCTATaGACGAGCCATGTCAGTTGC +
Preference number: 5 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGSPGSL*TSHVSC
Trigger: GCAACTGACATGGCTCGTCAATAGGCTGCCAGGACT...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCCTTCTCTTCTGGCTTaGGAGACCGGGAGTCGGAGG +
Preference number: 5 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWPSLLA*ETGSRR
Trigger: CCTCCGACTCCCGGTCTCCAAAGCCAGAAGAGAAGG...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CAGGCCTGGGCTCAGGGGGCTCCGCTAAACCAGAGGCCTGGAGGAGCCTGGCTGACGATAATAAGGTTTTaGCTCAATACCCAGGGTTCT +
Preference number: 5 (lower is better)
Translates to: QAWAQGAPLNQRPGGAWLTIIRF*LNTQGS
Trigger: AGAACCCTGGGTATTGAGCAAAAACCTTATTATCGT...CAGCCAGGCTCCTCCAGGCCTCTGGTTTAGCGGAGCCCCCTGAGCCCAGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS TCA 90 bp GCAGCTGGCCTCACAGGTGTTAACCGTGGAGCTGGTTTCATAGTGTaGGGCTTCGTAATGGGGATGGTAGGAACCCGCACCTTTGGCCGA +
Preference number: 5 (lower is better)
Translates to: AAGLTGVNRGAGFIV*GFVMGMVGTRTFGR
Trigger: TCGGCCAAAGGTGCGGGTTCCTACCATCCCCATTACGAAGCCTCACACTATGAAACCAGCTCCACGGTTAACACCTGTGAGGCCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000529124.1
ENST00000530342.2
ENST00000531696.5
CDS CCA 90 bp AAAAGGGAGCAAACAGTTGCTGAATCAAACCTTCTCTTCTGGCTTTaGAGACCGGGAGTCGGAGGCGTCAGGAGAGAGGAGCGCGACCCC +
Preference number: 5 (lower is better)
Translates to: KREQTVAESNLLFWL*RPGVGGVRREERDP
Trigger: GGGGTCGCGCTCCTCTCTCCTGACGCCTCCGACTCCCGGTCTCCAAAGCCAGAAGAGAAGGTTTGATTCAGCAACTGTTTGCTCCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTACCAGTGAGGGCTAACTaGGGATCGCTGTTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLPVRAN*GSLLAS
Trigger: GCTTGCCAACAGCGATCCCAAGTTAGCCCTCACTGG...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCATTTTTGCCGCTGGGATaGTTCTCCTTTTCCCGTACC +
Preference number: 5 (lower is better)
Translates to: RESVMEERRALDTTRTWPFLPLG*FSFSRT
Trigger: GGTACGGGAAAAGGAGAACAATCCCAGCGGCAAAAA...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCCATTTATACCACGTCTaGCACACTCGCATACATTCA +
Preference number: 5 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPHLYHV*HTRIHS
Trigger: TGAATGTATGCGAGTGTGCAAGACGTGGTATAAATG...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp CAATTTATTGCAACCTGCCATATTGAGCTCTGTGAGAGAGTAGCGAGTGGAAGAATGGGCCCCCTGGCGTaGCCCCTCCTCCCGGAGCGT +
Preference number: 5 (lower is better)
Translates to: QFIATCHIELCERVASGRMGPLA*PLLPER
Trigger: ACGCTCCGGGAGGAGGGGCAACGCCAGGGGGCCCAT...TCTTCCACTCGCTACTCTCTCACAGAGCTCAATATGGCAGGTTGCAATAAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR CAA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCTTCCCTGGGAGTTaGCTCAGAACCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: APRQHSLCFPLRSICYSLFFPGS*LRTRHC
Trigger: GCAGTGCCTGGTTCTGAGCAAACTCCCAGGGAAGAA...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCCCCAGCGTCTTTGTTTaGTTTTCTGTACTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPPSVFV*FSVLEV
Trigger: AACTTCCAGTACAGAAAACAAAACAAAGACGCTGGG...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS CCA 90 bp ACCAGGAAAAGGGAGCAAACAGTTGCTGAATCAAACCTTCTCTTCTaGCTTTGGAGACCGGGAGTCGGAGGCGTCAGGAGAGAGGAGCGC +
Preference number: 5 (lower is better)
Translates to: TRKREQTVAESNLLF*LWRPGVGGVRREER
Trigger: GCGCTCCTCTCTCCTGACGCCTCCGACTCCCGGTCTCCAAAGCCAGAAGAGAAGGTTTGATTCAGCAACTGTTTGCTCCCTTTTCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAGTGGGGACACATTTCTaGTGCAGTGGCAGAGACTCC +
Preference number: 5 (lower is better)
Translates to: WPRWQRGDHSASIALEVAVGTHF*CSGRDS
Trigger: GGAGTCTCTGCCACTGCACAAGAAATGTGTCCCCAC...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp GGGGGAGATAGGCTGCTCCCTCTGAGGACGTGCATCCTGGGAAAGCCTTCTTCACCTTGCACACAGGCTTaGCATTTTCGACATCGCACT +
Preference number: 5 (lower is better)
Translates to: GGDRLLPLRTCILGKPSSPCTQA*HFRHRT
Trigger: AGTGCGATGTCGAAAATGCAAAGCCTGTGTGCAAGG...TGAAGAAGGCTTTCCCAGGATGCACGTCCTCAGAGGGAGCAGCCTATCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCGTCCCGTGGAGCTCTTaGGTGGGCCTCTGTAGCGTG +
Preference number: 5 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTVPWSS*VGLCSV
Trigger: CACGCTACAGAGGCCCACCAAAGAGCTCCACGGGAC...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR CAA 90 bp TTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGTTTCGAGTGATCTGCTaGCATCCTCGAAGGTCGATC +
Preference number: 5 (lower is better)
Translates to: FGRSQQHQCDRHGSGTPGFRVIC*HPRRSI
Trigger: GATCGACCTTCGAGGATGCAAGCAGATCACTCGAAA...CCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCGTGGCAAGGGTGCAGTaGGCGTCTCTCTTCTCAGTG +
Preference number: 5 (lower is better)
Translates to: HSASIALEVARVQLASLFVARVQ*ASLFSV
Trigger: CACTGAGAAGAGAGACGCCAACTGCACCCTTGCCAC...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGTCTGCCTCTATTGCTTaGGAAGTGGCAAGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLSASIA*EVARVQ
Trigger: CTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGA...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp ATGGGGCTCAACAAAGGGCGGTGGAGCGGGAGACACCATGCTCCCCTCCCTCCCGCACAACATTGGAGATaGACTCTAAATCAGCAACAA +
Preference number: 5 (lower is better)
Translates to: MGLNKGRWSGRHHAPLPPAQHWR*TLNQQQ
Trigger: TTGTTGCTGATTTAGAGTCAATCTCCAATGTTGTGC...GGGAGGGAGGGGAGCATGGTGTCTCCCGCTCCACCGCCCTTTGTTGAGCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR CAA 90 bp TGGGGCTTGGCCCAGTCCTCTGCCGCCTCCAGCTTGGGGGAGATAGGCTGCTCCAAAATCCGGATTTACTaGAATATTCTGGAATCTCCC +
Preference number: 5 (lower is better)
Translates to: WGLAQSSAASSLGEIGCSKIRIY*NILESP
Trigger: GGGAGATTCCAGAATATTCAAGTAAATCCGGATTTT...GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGAGGACTGGGCCAAGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS TCA 90 bp CTTGTGTCTCTTCATTCTGATCCACCTCTCCACAGAGGGAACATGTaGCTGAGTGAGGCAGTCTGGGTGCCAAGCACTGTCGGAGGACAC +
Preference number: 5 (lower is better)
Translates to: LVSLHSDPPLHRGNM*LSEAVWVPSTVGGH
Trigger: GTGTCCTCCGACAGTGCTTGGCACCCAGACTGCCTCACTCAGTCACATGTTCCCTCTGTGGAGAGGTGGATCAGAATGAAGAGACACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000529124.1
ENST00000530342.2
ENST00000531696.5
CDS TCA 90 bp TCCAGAGAGGGTCAGAGCGACCAGGAAAAGGGAGCAAACAGTTGCTaGATCAAACCTTCTCTTCTGGCTTTGGAGACCGGGAGTCGGAGG +
Preference number: 5 (lower is better)
Translates to: SREGQSDQEKGANSC*IKPSLLALETGSRR
Trigger: CCTCCGACTCCCGGTCTCCAAAGCCAGAAGAGAAGGTTTGATTCAGCAACTGTTTGCTCCCTTTTCCTGGTCGCTCTGACCCTCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGGAAGACCTTTCCCCCTaGATGGATGTGATACCAAAC +
Preference number: 5 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPEDLSP*MDVIPN
Trigger: GTTTGGTATCACATCCATCAAGGGGGAAAGGTCTTC...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCTGGGGATCCCACACTaGTCCATTGTGGGAGCCCCG +
Preference number: 5 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPLGIPH*SIVGAP
Trigger: CGGGGCTCCCACAATGGACAAGTGTGGGATCCCCAG...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp TTGATTCCTACTGCCCACCGAAGATCAAGGGTCCTGAGAAGGGGGCAGCTGGAGCCTCCTGGTAGCACTTaGGACATTCCCAGCAATTTG +
Preference number: 5 (lower is better)
Translates to: LIPTAHRRSRVLRRGQLEPPGST*DIPSNL
Trigger: CAAATTGCTGGGAATGTCCAAAGTGCTACCAGGAGG...CTCCAGCTGCCCCCTTCTCAGGACCCTTGATCTTCGGTGGGCAGTAGGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR CAA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTTTTGCCGCTGGGATaGTTCTCCTTTTCCCGTACC +
Preference number: 5 (lower is better)
Translates to: APRQHSLCFPLRSICYSLFLPLG*FSFSRT
Trigger: GGTACGGGAAAAGGAGAACAATCCCAGCGGCAAAAA...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGTACGATCCCCGGATCTaGGCTTTCTCAACTTCAGAC +
Preference number: 5 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLYDPRI*AFSTSD
Trigger: GTCTGAAGTTGAGAAAGCCAAGATCCGGGGATCGTA...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR CAA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCATGCTTTTTAGAGATGTaGGTCCAACTGAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: RESVMEERRALDTTRTWPCFLEM*VQLRSR
Trigger: CCTTGACCTCAGTTGGACCAACATCTCTAAAAAGCA...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGTCCTTAGGAACCAGATaGCAACACGGAGATTCTGCT +
Preference number: 5 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPSLGTR*QHGDSA
Trigger: AGCAGAATCTCCGTGTTGCAATCTGGTTCCTAAGGA...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTTTTGTCCAAAGTCTCTaGTCGCAGCACCATGGTGCG +
Preference number: 5 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSFVQSL*SQHHGA
Trigger: CGCACCATGGTGCTGCGACAAGAGACTTTGGACAAA...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR CAA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGAAGATCGGTTTCCTGTaGAATCTGGGCTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLKIGFL*NLGWVC
Trigger: ACACACCCAGCCCAGATTCAACAGGAAACCGATCTT...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS GCA 90 bp CTCTGCAGTAGTGGCAAACACCACACTCTCCTTGCACACAGGCTTTaGATTTTCGACATCGCACTCGTCTCCGTCTGGCTCCTGACACAA +
Preference number: 5 (lower is better)
Translates to: LCSSGKHHTLLAHRL*IFDIALVSVWLLTQ
Trigger: TTGTGTCAGGAGCCAGACGGAGACGAGTGCGATGTCGAAAATGCAAAGCCTGTGTGCAAGGAGAGTGTGGTGTTTGCCACTACTGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000529124.1
ENST00000530342.2
ENST00000531696.5
CDS CCA 90 bp CTCCGAGCTGTCCTCCTGGTAGCACTTTGGACATTCCCAGCAATTTaGCAATTCTTCGTTAAGCAACCCCTCTCCGTCCATCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LRAVLLVALWTFPAI*QFFVKQPLSVHLEA
Trigger: TGCCTCCAGATGGACGGAGAGGGGTTGCTTAACGAAGAATTGCCAAATTGCTGGGAATGTCCAAAGTGCTACCAGGAGGACAGCTCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000529124.1
ENST00000530342.2
ENST00000531696.5
ENST00000534486.1
CDS-3UTR CAA 90 bp GCACAGGGCCCAGTGCAGATGAAGGTTGCACAAACACCCCAAACTGAGAGCCCGCTCCCCACACACATTTaGACATCATTCACAGTGAAG +
Preference number: 5 (lower is better)
Translates to: AQGPVQMKVAQTPQTESPLPTHI*TSFTVK
Trigger: CTTCACTGTGAATGATGTCAAAATGTGTGTGGGGAG...CGGGCTCTCAGTTTGGGGTGTTTGTGCAACCTTCATCTGCACTGGGCCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATGGGTCAGATGCACTaGCCTGTCCTTTCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTMGQMH*PVLSGS
Trigger: GCTCCCCGAAAGGACAGGCAAGTGCATCTGACCCAT...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTACCTCCTGGTAGCACTTaGGACATTCCCAGCAATTTG +
Preference number: 5 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLPPGST*DIPSNL
Trigger: CAAATTGCTGGGAATGTCCAAAGTGCTACCAGGAGG...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTCCTCCTGGTAGCACTTaGGACATTCCCAGCAATTTG +
Preference number: 5 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSPPGST*DIPSNL
Trigger: CAAATTGCTGGGAATGTCCAAAGTGCTACCAGGAGG...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAAGGGGCCGCAGGACTTaGGCTTGCACAGCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: NYVNKHECWAEPSSRERKRGRRT*ACTASS
Trigger: CGAAGAAGCTGTGCAAGCCAAAGTCCTGCGGCCCCT...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCATTTGTCCAAAGTCTCTaGTCGCAGCACCATTTATAC +
Preference number: 5 (lower is better)
Translates to: RESVMEERRALDTTRTWPFVQSL*SQHHLY
Trigger: GTATAAATGGTGCTGCGACAAGAGACTTTGGACAAA...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGTACTCAAGTCAATTTTaGTCCAAAGTCTCTTGTCGC +
Preference number: 5 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLYSSQF*SKVSCR
Trigger: GCGACAAGAGACTTTGGACAAAAATTGACTTGAGTA...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGAAGCAAGTCCCGAATTaGAGGGTCCTTGATTCCTAC +
Preference number: 5 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLKQVPN*RVLDSY
Trigger: GTAGGAATCAAGGACCCTCAAATTCGGGACTTGCTT...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCATGGTCTGTCAATTTATaGCAACCTGCCATATTGAGC +
Preference number: 5 (lower is better)
Translates to: RESVMEERRALDTTRTWPWSVNL*QPAILS
Trigger: GCTCAATATGGCAGGTTGCAATAAATTGACAGACCA...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTATTTCGAGTGATCTGCTaGCATCCTCGAAGGTCGATC +
Preference number: 5 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLFRVIC*HPRRSI
Trigger: GATCGACCTTCGAGGATGCAAGCAGATCACTCGAAA...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp TTGATTCCTACTGCCCACCGAAGATCAAGGGTCCTGAGAAGGGGGCAGCTGGAGACGGAGATTCTGCTCTaGAGTTCTTGTCCAAGTGAG +
Preference number: 5 (lower is better)
Translates to: LIPTAHRRSRVLRRGQLETEILL*SSCPSE
Trigger: CTCACTTGGACAAGAACTCAAGAGCAGAATCTCCGT...CTCCAGCTGCCCCCTTCTCAGGACCCTTGATCTTCGGTGGGCAGTAGGAATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR CAA 90 bp CAATTTATTGCAACCTGCCATATTGAGCTCTGTGAGAGAGTAGCGAGTGGAAGATCTGCCGCCTCCAGCTaGGGGGAGATAGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QFIATCHIELCERVASGRSAASS*GEIGCS
Trigger: GGAGCAGCCTATCTCCCCCAAGCTGGAGGCGGCAGA...TCTTCCACTCGCTACTCTCTCACAGAGCTCAATATGGCAGGTTGCAATAAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR CAA 90 bp GGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTGGGACTCCTGGGGCTGACGATAATAAGGTTTTaGCTCAATACCCAGGGTTCT +
Preference number: 5 (lower is better)
Translates to: GDLNSTSVIGTGLGLLGLTIIRF*LNTQGS
Trigger: AGAACCCTGGGTATTGAGCAAAAACCTTATTATCGT...CAGCCCCAGGAGTCCCAGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CGGGAGAGTGTGATGGAGGAGAGACGCGCACTGGACACCACAAGAACCTGGCCAACCCAAAAGAAACCATaGGCTTGGAAATTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: RESVMEERRALDTTRTWPTQKKP*AWKFLW
Trigger: CCACAGAAATTTCCAAGCCAATGGTTTCTTTTGGGT...TGGCCAGGTTCTTGTGGTGTCCAGTGCGCGTCTCTCCTCCATCACACTCTCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp GGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCGATAGCGAAACTTATTaGGAACCCGTGTCCGATCTT +
Preference number: 5 (lower is better)
Translates to: GGKEGTTLPLLLWKWQGCDSETY*EPVSDL
Trigger: AAGATCGGACACGGGTTCCAAATAAGTTTCGCTATC...GCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCAAACACCACACTCTCCTaGCACACAGGCTTTGCATTT +
Preference number: 5 (lower is better)
Translates to: WPRWQRGDHSASIALEVANTTLS*HTGFAF
Trigger: AAATGCAAAGCCTGTGTGCAAGGAGAGTGTGGTGTT...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCCCGCAGGACTTTGGCTaGCACAGCTTCTTCGTCACT +
Preference number: 5 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTPQDFG*HSFFVT
Trigger: AGTGACGAAGAAGCTGTGCAAGCCAAAGTCCTGCGG...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACAGGGGCCGCAGGACTTaGGCTTGCACAGCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: QSFISSCHRLLLLSISSHRGRRT*ACTASS
Trigger: CGAAGAAGCTGTGCAAGCCAAAGTCCTGCGGCCCCT...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAAAGCAAGTCCCGAATTaGAGGGTCCTTGATTCCTAC +
Preference number: 5 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLKQVPN*RVLDSY
Trigger: GTAGGAATCAAGGACCCTCAAATTCGGGACTTGCTT...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCTTTCGAGTGATCTGCTaGCATCCTCGAAGGTCGATC +
Preference number: 5 (lower is better)
Translates to: HSASIALEVARVQLASLFFRVIC*HPRRSI
Trigger: GATCGACCTTCGAGGATGCAAGCAGATCACTCGAAA...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS GCA 90 bp GAACTCGCCTTCATTAACTTGATCAGTGGAGCTCCCATCACAGGCTaGTTATGGCTTCTGGGAAAAGCAGAGTACCTGGAGGCTCGTTCT +
Preference number: 5 (lower is better)
Translates to: ELAFINLISGAPITG*LWLLGKAEYLEARS
Trigger: AGAACGAGCCTCCAGGTACTCTGCTTTTCCCAGAAGCCATAAGCAGCCTGTGATGGGAGCTCCACTGATCAAGTTAATGAAGGCGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524657.1
CDS GCA 90 bp CAATCCTTGCTATTGCTTTGGTCTCCCACAGCACACGGAGGAAGATaGAGGGCGCATCACTTACTTCTGCACTTTAGGGTACTGCATCTC +
Preference number: 5 (lower is better)
Translates to: QSLLLLWSPTAHGGR*RAHHLLLHFRVLHL
Trigger: GAGATGCAGTACCCTAAAGTGCAGAAGTAAGTGATGCGCCCTGCATCTTCCTCCGTGTGCTGTGGGAGACCAAAGCAATAGCAAGGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528380.1
CDS GCA 90 bp TCATTCAAGACACAGAGCAAAGCTCGTAAGGGAGAAGCCAATCCTTaGTATTGCTTTGGTCTCCCACAGCACACGGAGGAAGATGCAGGG +
Preference number: 5 (lower is better)
Translates to: SFKTQSKARKGEANP*YCFGLPQHTEEDAG
Trigger: CCCTGCATCTTCCTCCGTGTGCTGTGGGAGACCAAAGCAATAGCAAGGATTGGCTTCTCCCTTACGAGCTTTGCTCTGTGTCTTGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528380.1
CDS CCA 90 bp TTTCCGCTTCTGGGCTTTCTCCGAGCTGTCCTCCTGGTAGCACTTTaGACATTCCCAGCAATTTGGCAATTCTTCGTTAAGCAACCCCTC +
Preference number: 5 (lower is better)
Translates to: FPLLGFLRAVLLVAL*TFPAIWQFFVKQPL
Trigger: GAGGGGTTGCTTAACGAAGAATTGCCAAATTGCTGGGAATGTCCAAAGTGCTACCAGGAGGACAGCTCGGAGAAAGCCCAGAAGCGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS-3UTR CAA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTCTCCCCACACACATTTaGACATCATTCACAGTGAAG +
Preference number: 5 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSLPTHI*TSFTVK
Trigger: CTTCACTGTGAATGATGTCAAAATGTGTGTGGGGAG...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTACCAAGATGGCATTTGTaGATTCAGTCTGGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLPRWHL*IQSGFP
Trigger: AGGAAAGCCAGACTGAATCAACAAATGCCATCTTGG...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp GTGCTCGCAGGCTTTTCGAGTGATCTGCTTGCATCCTCGAAGGTCGATCAAGGTGAAGACCTTTCCCCCTaGATGGATGTGATACCAAAC +
Preference number: 5 (lower is better)
Translates to: VLAGFSSDLLASSKVDQGEDLSP*MDVIPN
Trigger: GTTTGGTATCACATCCATCAAGGGGGAAAGGTCTTC...ACCTTGATCGACCTTCGAGGATGCAAGCAGATCACTCGAAAAGCCTGCGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS-3UTR CAA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGAAGTTTTCTTCAGACTaGGAAGACTTCGGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLKFSSD*EDFGRF
Trigger: AAACCTGCCGAAGTCTTCCAAGTCTGAAGAAAACTT...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCAACTTGGGATCGCTGTaGGCAAGCTCCTCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTNLGSL*ASSSSK
Trigger: TTTGCTGGAGGAGCTTGCCAACAGCGATCCCAAGTT...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCAACACCACACTCTCCTaGCACACAGGCTTTGCATTT +
Preference number: 5 (lower is better)
Translates to: HSASIALEVARVQLASLFNTTLS*HTGFAF
Trigger: AAATGCAAAGCCTGTGTGCAAGGAGAGTGTGGTGTT...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp GCAAGGGTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGCATTTATACCACGTCTaGCACACTCGCATACATTCA +
Preference number: 5 (lower is better)
Translates to: ARVQLASLFSVAHTLDPWHLYHV*HTRIHS
Trigger: TGAATGTATGCGAGTGTGCAAGACGTGGTATAAATG...CCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCACCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR CAA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGTGGTCTGTCAATTTATaGCAACCTGCCATATTGAGC +
Preference number: 5 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLWSVNL*QPAILS
Trigger: GCTCAATATGGCAGGTTGCAATAAATTGACAGACCA...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTTTCTTCCCTGGGAGTTaGCTCAGAACCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPFFPGS*LRTRHC
Trigger: GCAGTGCCTGGTTCTGAGCAAACTCCCAGGGAAGAA...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCTGTCTCAGAATCCACTaGGGTAGCAACGAAATGGGT +
Preference number: 5 (lower is better)
Translates to: LDSTACAFPSDQSATPFSCLRIH*GSNEMG
Trigger: ACCCATTTCGTTGCTACCCAAGTGGATTCTGAGACA...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp AGGCACTCTCCCGGCACAATCCCTGCTCTGAAGGGGTCTCTCCACCTCCCCTTTGAGCAGAGTGCAAATTaGCATCAATCATTTATAAGC +
Preference number: 5 (lower is better)
Translates to: RHSPGTIPALKGSLHLPFEQSAN*HQSFIS
Trigger: GCTTATAAATGATTGATGCAAATTTGCACTCTGCTC...AAAGGGGAGGTGGAGAGACCCCTTCAGAGCAGGGATTGTGCCGGGAGAGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp GTGCAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGACCCAAAAGAAACCATaGGCTTGGAAATTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: VQLASLFSVAHTLDPWCLTQKKP*AWKFLW
Trigger: CCACAGAAATTTCCAAGCCAATGGTTTCTTTTGGGT...CAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CAGTTGGCGTCTCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCAGAGGAAAGATGTCCTaGCTCTCTCTAAAACCAATA +
Preference number: 5 (lower is better)
Translates to: QLASLFSVAHTLDPWCLGRGKMS*LSLKPI
Trigger: TATTGGTTTTAGAGAGAGCAAGGACATCTTTCCTCT...GCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGAGACGCCAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS GCA 90 bp CTCCCACAGCACACGGAGGAAGATGCAGGGCGCATCACTTACTTCTaGACTTTAGGGTACTGCATCTCCAAGATGGCATTTGTTGATTCA +
Preference number: 5 (lower is better)
Translates to: LPQHTEEDAGRITYF*TLGYCISKMAFVDS
Trigger: TGAATCAACAAATGCCATCTTGGAGATGCAGTACCCTAAAGTGCAGAAGTAAGTGATGCGCCCTGCATCTTCCTCCGTGTGCTGTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528380.1
CDS CCA 90 bp CTACAAACTCTGGGCTTTCTCCGAGCTGTCCTCCTGGTAGCACTTTaGACATTCCCAGCAATTTGGCAATTCTTCGTTAAGCAACCCCTC +
Preference number: 5 (lower is better)
Translates to: LQTLGFLRAVLLVAL*TFPAIWQFFVKQPL
Trigger: GAGGGGTTGCTTAACGAAGAATTGCCAAATTGCTGGGAATGTCCAAAGTGCTACCAGGAGGACAGCTCGGAGAAAGCCCAGAGTTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529124.1
CDS CCA 90 bp TTCCTTTACCTGGGCTTTCTCCGAGCTGTCCTCCTGGTAGCACTTTaGACATTCCCAGCAATTTGGCAATTCTTCGTTAAGCAACCCCTC +
Preference number: 5 (lower is better)
Translates to: FLYLGFLRAVLLVAL*TFPAIWQFFVKQPL
Trigger: GAGGGGTTGCTTAACGAAGAATTGCCAAATTGCTGGGAATGTCCAAAGTGCTACCAGGAGGACAGCTCGGAGAAAGCCCAGGTAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525041.5
CDS-3UTR CAA 90 bp CACTCTGCCTCTATTGCTTTGGAAGTGGCAAGGGTGCAGTTGGCGTCTCTCTTCCCAAGATGGCATTTGTaGATTCAGTCTGGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: HSASIALEVARVQLASLFPRWHL*IQSGFP
Trigger: AGGAAAGCCAGACTGAATCAACAAATGCCATCTTGG...GAAGAGAGACGCCAACTGCACCCTTGCCACTTCCAAAGCAATAGAGGCAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCCCTTGCACACAGGCTTaGCATTTTCGACATCGCACT +
Preference number: 5 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTPCTQA*HFRHRT
Trigger: AGTGCGATGTCGAAAATGCAAAGCCTGTGTGCAAGG...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp AAGGACGTGAGGTTTGGGAGATCTCAACAGCACCAGTGTGATCGGCACGGGTCTTTTGTCCAAAGTCTCTaGTCGCAGCACCATTTATAC +
Preference number: 5 (lower is better)
Translates to: KDVRFGRSQQHQCDRHGSFVQSL*SQHHLY
Trigger: GTATAAATGGTGCTGCGACAAGAGACTTTGGACAAA...AGACCCGTGCCGATCACACTGGTGCTGTTGAGATCTCCCAAACCTCACGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTACTCAAGTCAATTTTaGTCCAAAGTCTCTTGTCGC +
Preference number: 5 (lower is better)
Translates to: APRQHSLCFPLRSICYSLYSSQF*SKVSCR
Trigger: GCGACAAGAGACTTTGGACAAAAATTGACTTGAGTA...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCGACGAGCCATGTCAGTaGCTTTTTAGAGATGTTGGT +
Preference number: 5 (lower is better)
Translates to: LDSTACAFPSDQSATPFSDEPCQ*LFRDVG
Trigger: ACCAACATCTCTAAAAAGCAACTGACATGGCTCGTC...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp ACTGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGAAAGGGAGCAAACAGTaGCTGAATCAAACCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TGLGGKEGTTLPLLLWKWKGSKQ*LNQTFS
Trigger: AGAGAAGGTTTGATTCAGCAACTGTTTGCTCCCTTT...CCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp TCTCTTCTCAGTGGCTCACACTTTAGACCCCTGGTGCCTGGGCTCCATTCCCTAAAAGGGAGCAAACAGTaGCTGAATCAAACCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SLLSGSHFRPLVPGLHSLKGSKQ*LNQTFS
Trigger: AGAGAAGGTTTGATTCAGCAACTGTTTGCTCCCTTT...TAGGGAATGGAGCCCAGGCACCAGGGGTCTAAAGTGTGAGCCACTGAGAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS GCA 90 bp ATGAGAGCATCTTCATCTTCTATCCCTGTGGGGACACATTTCTTGTaGAGTGGCAGAGACTCCAACTTATCTACAAGGCAGCGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: MRASSSSIPVGTHFL*SGRDSNLSTRQRRP
Trigger: AGGCCTTCGCTGCCTTGTAGATAAGTTGGAGTCTCTGCCACTGCACAAGAAATGTGTCCCCACAGGGATAGAAGATGAAGATGCTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000531696.5
CDS CCA 90 bp AGCATCTTCATCTTCTATCCCTGTGGGGACACATTTCTTGTGCAGTaGCAGAGACTCCAACTTATCTACAAGGCAGCGAAGGCCTTCAAG +
Preference number: 5 (lower is better)
Translates to: SIFIFYPCGDTFLVQ*QRLQLIYKAAKAFK
Trigger: CTTGAAGGCCTTCGCTGCCTTGTAGATAAGTTGGAGTCTCTGCCACTGCACAAGAAATGTGTCCCCACAGGGATAGAAGATGAAGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000531696.5
CDS-3UTR CAA 90 bp TGGCCTAGGTGGCAAAGAGGGGACCACTCTGCCTCTATTGCTTTGGAAGTGGCATTGGCATTATATTTGTaGGTGTGCAGTTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: WPRWQRGDHSASIALEVALALYL*VCSFSS
Trigger: GGAAGAGAAACTGCACACCAACAAATATAATGCCAA...TGCCACTTCCAAAGCAATAGAGGCAGAGTGGTCCCCTCTTTGCCACCTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCTCCCACACTTGTCCATaGTGGGAGCCCCGGCTACAG +
Preference number: 5 (lower is better)
Translates to: YPYRGGAECKFASIIYKLSHTCP*WEPRLQ
Trigger: CTGTAGCCGGGGCTCCCACAATGGACAAGTGTGGGA...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAACCTTGCACACAGGCTTaGCATTTTCGACATCGCACT +
Preference number: 5 (lower is better)
Translates to: HMDQPSPLKTISPHSPKEPCTQA*HFRHRT
Trigger: AGTGCGATGTCGAAAATGCAAAGCCTGTGTGCAAGG...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp GCGCCTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTTCTTCTCAAAGTCTaGTGTCTCTTCATTCTGATC +
Preference number: 5 (lower is better)
Translates to: APRQHSLCFPLRSICYSLFLLKV*CLFILI
Trigger: GATCAGAATGAAGAGACACAAGACTTTGAGAAGAAA...AAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAGGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCGTGATGGCCTGCAGCTaGGGCACAATGGATGTCCCG +
Preference number: 5 (lower is better)
Translates to: YPYRGGAECKFASIIYKLVMACS*GTMDVP
Trigger: CGGGACATCCATTGTGCCCAAGCTGCAGGCCATCAC...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR CAA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCCCTTCTCTTCTGGCTTaGGAGACCGGGAGTCGGAGG +
Preference number: 5 (lower is better)
Translates to: YPYRGGAECKFASIIYKLPSLLA*ETGSRR
Trigger: CCTCCGACTCCCGGTCTCCAAAGCCAGAAGAGAAGG...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp AATTATGTGAACAAGCACGAGTGCTGGGCAGAACCAAGCTCAAGGGAGAGGAAAAAGATCGGTTTCCTGTaGAATCTGGGCTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: NYVNKHECWAEPSSRERKKIGFL*NLGWVC
Trigger: ACACACCCAGCCCAGATTCAACAGGAAACCGATCTT...TTTCCTCTCCCTTGAGCTTGGTTCTGCCCAGCACTCGTGCTTGTTCACATAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS TCA 90 bp TGTCTCTTCATTCTGATCCACCTCTCCACAGAGGGAACATGTGACTaGGTGAGGCAGTCTGGGCTACAAGAGGACAAAGATAGAATCCAA +
Preference number: 5 (lower is better)
Translates to: CLFILIHLSTEGTCD*VRQSGLQEDKDRIQ
Trigger: TTGGATTCTATCTTTGTCCTCTTGTAGCCCAGACTGCCTCACTCAGTCACATGTTCCCTCTGTGGAGAGGTGGATCAGAATGAAGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534486.1
CDS GCA 90 bp GAGGAAGATGCAGGGCGCATCACTTACTTCTGCACTTTAGGGTACTaGATCTCCAAGATGGCATTTGTTGATTCAGTCTGGCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: EEDAGRITYFCTLGY*ISKMAFVDSVWLSF
Trigger: GAAGGAAAGCCAGACTGAATCAACAAATGCCATCTTGGAGATGCAGTACCCTAAAGTGCAGAAGTAAGTGATGCGCCCTGCATCTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528380.1
CDS CCA 90 bp GGGATGGTAGGAACCCGCACCTTTGGCCGAGTGGGGAATTTAAGCTaGAAAGAGAAAGCAGTGAGGTCAAATATATCAGGTTGCTTTAAG +
Preference number: 5 (lower is better)
Translates to: GMVGTRTFGRVGNLS*KEKAVRSNISGCFK
Trigger: CTTAAAGCAACCTGATATATTTGACCTCACTGCTTTCTCTTTCCAGCTTAAATTCCCCACTCGGCCAAAGGTGCGGGTTCCTACCATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529124.1
CDS-3UTR CAA 90 bp CTCGACAGCACAGCCTGTGCTTTCCCCTCAGATCAATCTGCTACTCCCTTTTCCTACTCAAGTCAATTTTaGTCCAAAGTCTCTTGTCGC +
Preference number: 5 (lower is better)
Translates to: LDSTACAFPSDQSATPFSYSSQF*SKVSCR
Trigger: GCGACAAGAGACTTTGGACAAAAATTGACTTGAGTA...GGAAAAGGGAGTAGCAGATTGATCTGAGGGGAAAGCACAGGCTGTGCTGTCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000529006.7
ENST00000530342.2
CDS-3UTR CAA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACAAGATCGGTTTCCTGTaGAATCTGGGCTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: QSFISSCHRLLLLSISSHKIGFL*NLGWVC
Trigger: ACACACCCAGCCCAGATTCAACAGGAAACCGATCTT...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAATGTCTCAGAATCCACTaGGGTAGCAACGAAATGGGT +
Preference number: 5 (lower is better)
Translates to: HMDQPSPLKTISPHSPKECLRIH*GSNEMG
Trigger: ACCCATTTCGTTGCTACCCAAGTGGATTCTGAGACA...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS TCA 90 bp CTGAAGGAGTTAGATATTCTGCCTCTGGGAAAATCCGGATTTACTTaGATATTCTGGAATCTCCCAGAGCACATAGGGCAGGGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: LKELDILPLGKSGFT*IFWNLPEHIGQGSP
Trigger: TGGACTGCCCTGCCCTATGTGCTCTGGGAGATTCCAGAATATTCAAGTAAATCCGGATTTTCCCAGAGGCAGAATATCTAACTCCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS-3UTR CAA 90 bp CAATCATTTATAAGCTCTTGCCATAGGCTGCTGCTACTGAGCATCTCCTCACACTGCCTTGGCCACATGTaGTCTACCCAGTCAATGAAA +
Preference number: 5 (lower is better)
Translates to: QSFISSCHRLLLLSISSHCLGHM*STQSMK
Trigger: TTTCATTGACTGGGTAGACAACATGTGGCCAAGGCA...GTGTGAGGAGATGCTCAGTAGCAGCAGCCTATGGCAAGAGCTTATAAATGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp GACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTGATAGCGAAACTTATTaGGAACCCGTGTCCGATCTT +
Preference number: 5 (lower is better)
Translates to: DTSFLHMDQPSPLKTISPDSETY*EPVSDL
Trigger: AAGATCGGACACGGGTTCCAAATAAGTTTCGCTATC...AGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAAGACGAGCCATGTCAGTaGCTTTTTAGAGATGTTGGT +
Preference number: 5 (lower is better)
Translates to: HMDQPSPLKTISPHSPKEDEPCQ*LFRDVG
Trigger: ACCAACATCTCTAAAAAGCAACTGACATGGCTCGTC...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAATCTCCAAGATGGCATTaGTTGATTCAGTCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: HMDQPSPLKTISPHSPKESPRWH*LIQSGF
Trigger: AAAGCCAGACTGAATCAACAAATGCCATCTTGGAGA...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp ATTACACAAATATCACCCATTCCCACGTGTCAGAGGAAAGATGTCCTTGCTCTCTCCTTAGGAACCAGATaGCAACACGGAGATTCTGCT +
Preference number: 5 (lower is better)
Translates to: ITQISPIPTCQRKDVLALSLGTR*QHGDSA
Trigger: AGCAGAATCTCCGTGTTGCAATCTGGTTCCTAAGGA...GAGAGCAAGGACATCTTTCCTCTGACACGTGGGAATGGGTGATATTTGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS-3UTR CAA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATAGCAGCCGCCGCCATTTaGAACCCGTCAGACTCTCAC +
Preference number: 5 (lower is better)
Translates to: SNQRKRQEASNYRSLTIIAAAAI*NPSDSH
Trigger: GTGAGAGTCTGACGGGTTCAAAATGGCGGCGGCTGC...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529006.7
CDS GCA 90 bp GTCGTCGCATGGTACCACGCTGAAGGAGGCCTTCACCAATGTATTTaGCAAAAACATTCGTTTGGTCACTATTTGCTGCCTTTTATCTTT +
Preference number: 5 (lower is better)
Translates to: VVAWYHAEGGLHQCI*QKHSFGHYLLPFIF
Trigger: AAAGATAAAAGGCAGCAAATAGTGACCAAACGAATGTTTTTGGCAAATACATTGGTGAAGGCCTCCTTCAGCGTGGTACCATGCGACGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308783.9
CDS-3UTR CAA 90 bp CCCAACAGAGACACTTCTTTCCTCCACATGGACCAACCCTCACCTCTAAAAACCTTTCTTCTCAAAGTCTaGTGTCTCTTCATTCTGATC +
Preference number: 5 (lower is better)
Translates to: PNRDTSFLHMDQPSPLKTFLLKV*CLFILI
Trigger: GATCAGAATGAAGAGACACAAGACTTTGAGAAGAAA...GGTTTTTAGAGGTGAGGGTTGGTCCATGTGGAGGAAAGAAGTGTCTCTGTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp CACATGGACCAACCCTCACCTCTAAAAACCATTTCCCCTCACAGTCCCAAAGAAGAGCAGAGTGCAAATTaGCATCAATCATTTATAAGC +
Preference number: 5 (lower is better)
Translates to: HMDQPSPLKTISPHSPKEEQSAN*HQSFIS
Trigger: GCTTATAAATGATTGATGCAAATTTGCACTCTGCTC...TTCTTTGGGACTGTGAGGGGAAATGGTTTTTAGAGGTGAGGGTTGGTCCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS GCA 90 bp CTTCCAAGTCAAAAGTTCTTTTTCCTTCAATTTCATCATCTGAAATaGCATCATCTTCATAGCGTCGTCGCATGGTACCACGCTGAAGGA +
Preference number: 5 (lower is better)
Translates to: LPSQKFFFLQFHHLK*HHLHSVVAWYHAEG
Trigger: TCCTTCAGCGTGGTACCATGCGACGACGCTATGAAGATGATGGCATTTCAGATGATGAAATTGAAGGAAAAAGAACTTTTGACTTGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308783.9
CDS-3UTR CAA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCTGCTTTTTAGAGATGTaGGTCCAACTGAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: YPYRGGAECKFASIIYKLCFLEM*VQLRSR
Trigger: CCTTGACCTCAGTTGGACCAACATCTCTAAAAAGCA...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATATTCAACCCCAGATTATaGGGGCCTGGAGACCAATGG +
Preference number: 5 (lower is better)
Translates to: SNQRKRQEASNYRSLTIIFNPRL*GPGDQW
Trigger: CCATTGGTCTCCAGGCCCCAATAATCTGGGGTTGAA...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS GCA 90 bp CTTCCAAGTCAAAAGTTCTTTTTCCTTCAATTTCATCATCTGAAATaGCATCATCTTCATAGCGTCGTCGCATGGTACCACGCAATCTCT +
Preference number: 5 (lower is better)
Translates to: LPSQKFFFLQFHHLK*HHLHSVVAWYHAIS
Trigger: AGAGATTGCGTGGTACCATGCGACGACGCTATGAAGATGATGGCATTTCAGATGATGAAATTGAAGGAAAAAGAACTTTTGACTTGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398645.6
ENST00000527157.1
ENST00000529006.7
CDS-3UTR CAA 90 bp TATCCTTACAGAGGGGGAGCAGAGTGCAAATTTGCATCAATCATTTATAAGCTCTGGTCTGTCAATTTATaGCAACCTGCCATATTGAGC +
Preference number: 5 (lower is better)
Translates to: YPYRGGAECKFASIIYKLWSVNL*QPAILS
Trigger: GCTCAATATGGCAGGTTGCAATAAATTGACAGACCA...GAGCTTATAAATGATTGATGCAAATTTGCACTCTGCTCCCCCTCTGTAAGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS-3UTR CAA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATAACGGAGATTCTGCTCTaGAGTTCTTGTCCAAGTGAG +
Preference number: 5 (lower is better)
Translates to: SNQRKRQEASNYRSLTIITEILL*SSCPSE
Trigger: CTCACTTGGACAAGAACTCAAGAGCAGAATCTCCGT...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS GCA 90 bp GAATCTCTTGTAACATCTATCATAACTGGAGTAAACCTCTTCACATaGAACTGTTACATAAGATTACTTACCCGTGTCCGATCTTCAATG +
Preference number: 5 (lower is better)
Translates to: ESLVTSIITGVNLFT*NCYIRLLTRVRSSM
Trigger: CATTGAAGATCGGACACGGGTAAGTAATCTTATGTAACAGTTGCATGTGAAGAGGTTTACTCCAGTTATGATAGATGTTACAAGAGATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525379.1
CDS-3UTR CAA 90 bp AGCAACCAAAGAAAAAGGCAGGAAGCTTCCAATTATAGGTCATTAACGATAATATTTCTTCTCAAAGTCTaGTGTCTCTTCATTCTGATC +
Preference number: 5 (lower is better)
Translates to: SNQRKRQEASNYRSLTIIFLLKV*CLFILI
Trigger: GATCAGAATGAAGAGACACAAGACTTTGAGAAGAAA...TATTATCGTTAATGACCTATAATTGGAAGCTTCCTGCCTTTTTCTTTGGTTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS GCA 72 bp AAGACAGAGCGGCCACGGGCCCAGCCGCTGGGAAGGTaGTCCGAGAGCCGCCGCCGCCGCCGCCGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: KTERPRAQPLGR*SESRRRRRRCR
Trigger: CCGGCAGCGGCGGCGGCGGCGGCGGCTCTCGGAGCACCTTCCCAGCGGCTGGGCCCGTGGCCGCTCTGTCTT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS GCA 72 bp CCTCGCCGTGCCCTCGGCCAGCAGGGGCTGGTCGCCTaGGGGAGCAGCGGCCGATCAGCTGAGACCGGCCGG +
Preference number: 6 (lower is better)
Translates to: PRRALGQQGLVA*GSSGRSAETGR
Trigger: CCGGCCGGTCTCAGCTGATCGGCCGCTGCTCCCGCAGGCGACCAGCCCCTGCTGGCCGAGGGCACGGCGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS CCA 72 bp AGCGCCCTCCTCGCCGTGCCCTCGGCCAGCAGGGGCTaGTCGCCTGCGGGAGCAGCGGCCGATCAGCTGAGA +
Preference number: 6 (lower is better)
Translates to: SALLAVPSASRG*SPAGAAADQLR
Trigger: TCTCAGCTGATCGGCCGCTGCTCCCGCAGGCGACCAGCCCCTGCTGGCCGAGGGCACGGCGAGGAGGGCGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS GCA 72 bp GGAAGGTGCTCCGAGAGCCGCCGCCGCCGCCGCCGCTaGCGGGGAGGGGTGTTGTTTCCCTCACACAGGAGG +
Preference number: 6 (lower is better)
Translates to: GRCSESRRRRRR*RGGVLFPSHRR
Trigger: CCTCCTGTGTGAGGGAAACAACACCCCTCCCCGGCAGCGGCGGCGGCGGCGGCGGCTCTCGGAGCACCTTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS TCA 72 bp GCTCTGTGGCCTGCAGCCGCAGCAACTGCCGCCGTTTaGAGCGCTCATCGCGGCTGGCACTGTGGTGGTCGC +
Preference number: 6 (lower is better)
Translates to: ALWPAAAATAAV*SAHRGWHCGGR
Trigger: GCGACCACCACAGTGCCAGCCGCGATGAGCGCTTCAAACGGCGGCAGTTGCTGCGGCTGCAGGCCACAGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CAA 72 bp CGCTCTGTGGCCTGCAGCCGCAGCAACTGCCGCCGTTaGAAGCGCTCATCGCGGCTGGCACTGTGGTGGTCG +
Preference number: 6 (lower is better)
Translates to: RSVACSRSNCRR*KRSSRLALWWS
Trigger: CGACCACCACAGTGCCAGCCGCGATGAGCGCTTCAAACGGCGGCAGTTGCTGCGGCTGCAGGCCACAGAGCG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CCA 72 bp CTTCAGACTACCCAGAGGGAGCAGCGTGCAGCGCTCTaGGCTCCTTCTCGAGCCCTTCAGCTCAGCCGCGGC +
Preference number: 6 (lower is better)
Translates to: LQTTQREQRAAL*APSRALQLSRG
Trigger: GCCGCGGCTGAGCTGAAGGGCTCGAGAAGGAGCCCAGAGCGCTGCACGCTGCTCCCTCTGGGTAGTCTGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS TCA 72 bp GGGTCATGGATGAGCTGCAGCATGGAAGTGGGTGAATaGGGCGGGGGCGTGAGAGGCTCATCGCAGCTCCGC +
Preference number: 6 (lower is better)
Translates to: GSWMSCSMEVGE*GGGVRGSSQLR
Trigger: GCGGAGCTGCGATGAGCCTCTCACGCCCCCGCCTCATTCACCCACTTCCATGCTGCAGCTCATCCATGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS GCA 72 bp TGCCGCTGGGATTGTTCTCCTTTTCCCGTACCATGGTaGGCTCTGTGGCCTGCAGCCGCAGCAACTGCCGCC +
Preference number: 6 (lower is better)
Translates to: CRWDCSPFPVPW*ALWPAAAATAA
Trigger: GGCGGCAGTTGCTGCGGCTGCAGGCCACAGAGCGCACCATGGTACGGGAAAAGGAGAACAATCCCAGCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS GCA 72 bp GTCTCTTGTCGCAGCACCATGGTGCGCTCTGTGGCCTaGAGCCGCAGCAACTGCCGCCGTTTGAAGCGCTCA +
Preference number: 6 (lower is better)
Translates to: VSCRSTMVRSVA*SRSNCRRLKRS
Trigger: TGAGCGCTTCAAACGGCGGCAGTTGCTGCGGCTGCAGGCCACAGAGCGCACCATGGTGCTGCGACAAGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398645.6
CDS CAA 90 bp GGGGAATGGCGAAGGTTGGCAGAGGAGGCCGTGATGGCCTGCAGCTaGGGCACAATGGATGTCCCGTGGAGCTCTTTGGTGGGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: GEWRRLAEEAVMACS*GTMDVPWSSLVGLC
Trigger: ACAGAGGCCCACCAAAGAGCTCCACGGGACATCCATTGTGCCCAAGCTGCAGGCCATCACGGCCTCCTCTGCCAACCTTCGCCATTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS GCA 72 bp CCTTCTCGAGCCCTTCAGCTCAGCCGCGGCTTCCTGTaGCTGCGAACAATGCTGCTGCGTCACCCACATGCA +
Preference number: 6 (lower is better)
Translates to: PSRALQLSRGFL*LRTMLLRHPHA
Trigger: TGCATGTGGGTGACGCAGCAGCATTGTTCGCAGGCACAGGAAGCCGCGGCTGAGCTGAAGGGCTCGAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS TCA 72 bp GGAGGGGTGTTGTTTCCCTCACACAGGAGGAGCCGCTaGAGCAGCCGCCGCCATTTTGAACCCGTCAGACTC +
Preference number: 6 (lower is better)
Translates to: GGVLFPSHRRSR*SSRRHFEPVRL
Trigger: GAGTCTGACGGGTTCAAAATGGCGGCGGCTGCTTCAGCGGCTCCTCCTGTGTGAGGGAAACAACACCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS GCA 72 bp TTCTCCTTTTCCCGTACCATGGTGCGCTCTGTGGCCTaGAGCCGCAGCAACTGCCGCCGTTTGAAGCGCTCA +
Preference number: 6 (lower is better)
Translates to: FSFSRTMVRSVA*SRSNCRRLKRS
Trigger: TGAGCGCTTCAAACGGCGGCAGTTGCTGCGGCTGCAGGCCACAGAGCGCACCATGGTACGGGAAAAGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CCA 72 bp GTCAGATGCACTTGCCTGTCCTTTCGGGGAGCACACTaGGGATCCCACACTTGTCCATTGTGGGAGCCCCGG +
Preference number: 6 (lower is better)
Translates to: VRCTCLSFRGAH*GSHTCPLWEPR
Trigger: CCGGGGCTCCCACAATGGACAAGTGTGGGATCCCCAGTGTGCTCCCCGAAAGGACAGGCAAGTGCATCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000531696.5
CDS CAA 72 bp CGAAGGTTGGCAGAGGAGGCCGTGATGGCCTGCAGCTaGGGCACAATGGATGTCCCGTGGAGCTCTTTGGTG +
Preference number: 6 (lower is better)
Translates to: RRLAEEAVMACS*GTMDVPWSSLV
Trigger: CACCAAAGAGCTCCACGGGACATCCATTGTGCCCAAGCTGCAGGCCATCACGGCCTCCTCTGCCAACCTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CAA 90 bp CGTGAGAGGCTCATCGCAGCTCCGCAGGGGCCGCAGGACTTTGGCTaGCACAGCTTCTTCGTCACTCTCTTCCATTTTCCGCTTCTGGGC +
Preference number: 6 (lower is better)
Translates to: RERLIAAPQGPQDFG*HSFFVTLFHFPLLG
Trigger: GCCCAGAAGCGGAAAATGGAAGAGAGTGACGAAGAAGCTGTGCAAGCCAAAGTCCTGCGGCCCCTGCGGAGCTGCGATGAGCCTCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CAA 90 bp GTGATGGCCTGCAGCTTGGGCACAATGGATGTCCCGTGGAGCTCTTaGGTGGGCCTCTGTAGCGTGACAGTGAGGTACGATCCCCGGATC +
Preference number: 6 (lower is better)
Translates to: VMACSLGTMDVPWSS*VGLCSVTVRYDPRI
Trigger: GATCCGGGGATCGTACCTCACTGTCACGCTACAGAGGCCCACCAAAGAGCTCCACGGGACATCCATTGTGCCCAAGCTGCAGGCCATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS GCA 72 bp AGCTCAGCCGCGGCTTCCTGTGCCTGCGAACAATGCTaGTGCGTCACCCACATGCAGCTCCCAGAAATGCTT +
Preference number: 6 (lower is better)
Translates to: SSAAASCACEQC*CVTHMQLPEML
Trigger: AAGCATTTCTGGGAGCTGCATGTGGGTGACGCAGCAGCATTGTTCGCAGGCACAGGAAGCCGCGGCTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS CCA 72 bp GTGATGGCCTGCAGCTTGGGCACAATGGATGTCCCGTaGAGCTCTTTGGTGGGCCTCTGTAGCGTGACAGTG +
Preference number: 6 (lower is better)
Translates to: VMACSLGTMDVP*SSLVGLCSVTV
Trigger: CACTGTCACGCTACAGAGGCCCACCAAAGAGCTCCACGGGACATCCATTGTGCCCAAGCTGCAGGCCATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS GCA 72 bp TCATCGCAGCTCCGCAGGGGCCGCAGGACTTTGGCTTaGACAGCTTCTTCGTCACTCTCTTCCATTTTCCGC +
Preference number: 6 (lower is better)
Translates to: SSQLRRGRRTLA*TASSSLSSIFR
Trigger: GCGGAAAATGGAAGAGAGTGACGAAGAAGCTGTGCAAGCCAAAGTCCTGCGGCCCCTGCGGAGCTGCGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CCA 72 bp GAGGCTCATCGCAGCTCCGCAGGGGCCGCAGGACTTTaGCTTGCACAGCTTCTTCGTCACTCTCTTCCATTT +
Preference number: 6 (lower is better)
Translates to: EAHRSSAGAAGL*LAQLLRHSLPF
Trigger: AAATGGAAGAGAGTGACGAAGAAGCTGTGCAAGCCAAAGTCCTGCGGCCCCTGCGGAGCTGCGATGAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CAA 72 bp CTCATCGCAGCTCCGCAGGGGCCGCAGGACTTTGGCTaGCACAGCTTCTTCGTCACTCTCTTCCATTTTCCG +
Preference number: 6 (lower is better)
Translates to: LIAAPQGPQDFG*HSFFVTLFHFP
Trigger: CGGAAAATGGAAGAGAGTGACGAAGAAGCTGTGCAAGCCAAAGTCCTGCGGCCCCTGCGGAGCTGCGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CAA 72 bp AGAGGCTCATCGCAGCTCCGCAGGGGCCGCAGGACTTaGGCTTGCACAGCTTCTTCGTCACTCTCTTCCATT +
Preference number: 6 (lower is better)
Translates to: RGSSQLRRGRRT*ACTASSSLSSI
Trigger: AATGGAAGAGAGTGACGAAGAAGCTGTGCAAGCCAAAGTCCTGCGGCCCCTGCGGAGCTGCGATGAGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CAA 72 bp TGCAGCTTGGGCACAATGGATGTCCCGTGGAGCTCTTaGGTGGGCCTCTGTAGCGTGACAGTGAGGTACGAT +
Preference number: 6 (lower is better)
Translates to: CSLGTMDVPWSS*VGLCSVTVRYD
Trigger: ATCGTACCTCACTGTCACGCTACAGAGGCCCACCAAAGAGCTCCACGGGACATCCATTGTGCCCAAGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS TCA 72 bp ATTCTGATCCACCTCTCCACAGAGGGAACATGTGACTaGGTGAGGCAGTCTGGGTGCCAAGCACTGTCGGAG +
Preference number: 6 (lower is better)
Translates to: ILIHLSTEGTCD*VRQSGCQALSE
Trigger: CTCCGACAGTGCTTGGCACCCAGACTGCCTCACTCAGTCACATGTTCCCTCTGTGGAGAGGTGGATCAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000529124.1
ENST00000530342.2
ENST00000531696.5
CDS CAA 90 bp TTGGTGGGCCTCTGTAGCGTGACAGTGAGGTACGATCCCCGGATCTaGGCTTTCTCAACTTCAGACAGCTCCTTTTTGCCGCTGGGATTG +
Preference number: 6 (lower is better)
Translates to: LVGLCSVTVRYDPRI*AFSTSDSSFLPLGL
Trigger: CAATCCCAGCGGCAAAAAGGAGCTGTCTGAAGTTGAGAAAGCCAAGATCCGGGGATCGTACCTCACTGTCACGCTACAGAGGCCCACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS TCA 72 bp CTCACAGGTGTTAACCGTGGAGCTGGTTTCATAGTGTaGGGCTTCGTAATGGGGATGGTAGGAACCCGCACC +
Preference number: 6 (lower is better)
Translates to: LTGVNRGAGFIV*GFVMGMVGTRT
Trigger: GGTGCGGGTTCCTACCATCCCCATTACGAAGCCTCACACTATGAAACCAGCTCCACGGTTAACACCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000529124.1
ENST00000530342.2
ENST00000531696.5
CDS TCA 72 bp CTTCATTCTGATCCACCTCTCCACAGAGGGAACATGTaGCTGAGTGAGGCAGTCTGGGTGCCAAGCACTGTC +
Preference number: 6 (lower is better)
Translates to: LHSDPPLHRGNM*LSEAVWVPSTV
Trigger: GACAGTGCTTGGCACCCAGACTGCCTCACTCAGTCACATGTTCCCTCTGTGGAGAGGTGGATCAGAATGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000529124.1
ENST00000530342.2
ENST00000531696.5
CDS GCA 72 bp TCTACCCAGTCAATGAAATCCACCGTGGAGGGCCTCTaGACCATATTCTCCAGCCTGGTGTGGCTAAACTCG +
Preference number: 6 (lower is better)
Translates to: STQSMKSTVEGL*TIFSSLVWLNS
Trigger: CGAGTTTAGCCACACCAGGCTGGAGAATATGGTGCAGAGGCCCTCCACGGTGGATTTCATTGACTGGGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000528380.1
ENST00000529006.7
CDS GCA 72 bp AGTGGCAAACACCACACTCTCCTTGCACACAGGCTTTaGATTTTCGACATCGCACTCGTCTCCGTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: SGKHHTLLAHRL*IFDIALVSVWL
Trigger: GAGCCAGACGGAGACGAGTGCGATGTCGAAAATGCAAAGCCTGTGTGCAAGGAGAGTGTGGTGTTTGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000529124.1
ENST00000530342.2
ENST00000531696.5
CDS CCA 72 bp CTGACTGGCTGCCTCTTGATGATGCCACTGAGGGCCTaGGGCACAATGGCCTTACACCTACTCAAGTCAATT +
Preference number: 6 (lower is better)
Translates to: LTGCLLMMPLRA*GTMALHLLKSI
Trigger: AATTGACTTGAGTAGGTGTAAGGCCATTGTGCCCCAGGCCCTCAGTGGCATCATCAAGAGGCAGCCAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000524657.1
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CCA 72 bp CAAACAGTTGCTGAATCAAACCTTCTCTTCTGGCTTTaGAGACCGGGAGTCGGAGGCGTCAGGAGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: QTVAESNLLFWL*RPGVGGVRREE
Trigger: CTCCTCTCTCCTGACGCCTCCGACTCCCGGTCTCCAAAGCCAGAAGAGAAGGTTTGATTCAGCAACTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS CAA 90 bp ATCTTGGCTTTCTCAACTTCAGACAGCTCCTTTTTGCCGCTGGGATaGTTCTCCTTTTCCCGTACCATGGTGCGCTCTGTGGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: ILAFSTSDSSFLPLG*FSFSRTMVRSVACS
Trigger: GCTGCAGGCCACAGAGCGCACCATGGTACGGGAAAAGGAGAACAATCCCAGCGGCAAAAAGGAGCTGTCTGAAGTTGAGAAAGCCAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS TCA 72 bp GGTCAGAGCGACCAGGAAAAGGGAGCAAACAGTTGCTaGATCAAACCTTCTCTTCTGGCTTTGGAGACCGGG +
Preference number: 6 (lower is better)
Translates to: GQSDQEKGANSC*IKPSLLALETG
Trigger: CCCGGTCTCCAAAGCCAGAAGAGAAGGTTTGATTCAGCAACTGTTTGCTCCCTTTTCCTGGTCGCTCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398645.6
ENST00000529006.7
CDS CCA 72 bp AGGCTTCGTAATGGGGATGGTAGGAACCCGCACCTTTaGCCGAGTGGGGAATTTAAGCTGGAAAGAGAAAGC +
Preference number: 6 (lower is better)
Translates to: RLRNGDGRNPHL*PSGEFKLERES
Trigger: GCTTTCTCTTTCCAGCTTAAATTCCCCACTCGGCCAAAGGTGCGGGTTCCTACCATCCCCATTACGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529124.1
CDS CAA 72 bp TCAGTCTGGCTTTCCTTCAAGTGCCTTGGCCACATGTaGTCTACCCAGTCAATGAAATCCACCGTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: SVWLSFKCLGHM*STQSMKSTVEG
Trigger: GCCCTCCACGGTGGATTTCATTGACTGGGTAGACAACATGTGGCCAAGGCACTTGAAGGAAAGCCAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000528380.1
ENST00000529006.7
CDS CAA 72 bp GGCCACTGTACTATAGGAACTCCAGTGAGGGCTAACTaGGGATCGCTGTTGGCAAGCTCCTCCAGCAAAATC +
Preference number: 6 (lower is better)
Translates to: GHCTIGTPVRAN*GSLLASSSSKI
Trigger: GATTTTGCTGGAGGAGCTTGCCAACAGCGATCCCAAGTTAGCCCTCACTGGAGTTCCTATAGTACAGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000517637.2
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CAA 90 bp CACTGTACTATAGGAACTCCAGTGAGGGCTAACTTGGGATCGCTGTaGGCAAGCTCCTCCAGCAAAATCTTTCGTTTCCCGTCGCTCTGG +
Preference number: 6 (lower is better)
Translates to: HCTIGTPVRANLGSL*ASSSSKIFRFPSLW
Trigger: CCAGAGCGACGGGAAACGAAAGATTTTGCTGGAGGAGCTTGCCAACAGCGATCCCAAGTTAGCCCTCACTGGAGTTCCTATAGTACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517637.2
ENST00000530342.2
CDS TCA 72 bp CTTCATTCTGATCCACCTCTCCACAGAGGGAACATGTaGCTGAGTGAGGCAGTCTGGGCTACAAGAGGACAA +
Preference number: 6 (lower is better)
Translates to: LHSDPPLHRGNM*LSEAVWATRGQ
Trigger: TTGTCCTCTTGTAGCCCAGACTGCCTCACTCAGTCACATGTTCCCTCTGTGGAGAGGTGGATCAGAATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534486.1
CDS GCA 72 bp CTATTGCTTTGGTCTCCCACAGCACACGGAGGAAGATaGAGGGCGCATCACTTACTTCTGCACTTTAGGGTA +
Preference number: 6 (lower is better)
Translates to: LLLWSPTAHGGR*RAHHLLLHFRV
Trigger: TACCCTAAAGTGCAGAAGTAAGTGATGCGCCCTGCATCTTCCTCCGTGTGCTGTGGGAGACCAAAGCAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528380.1
CDS GCA 72 bp ACACAGAGCAAAGCTCGTAAGGGAGAAGCCAATCCTTaGTATTGCTTTGGTCTCCCACAGCACACGGAGGAA +
Preference number: 6 (lower is better)
Translates to: TQSKARKGEANP*YCFGLPQHTEE
Trigger: TTCCTCCGTGTGCTGTGGGAGACCAAAGCAATAGCAAGGATTGGCTTCTCCCTTACGAGCTTTGCTCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528380.1
CDS CCA 72 bp GCTGATGACATTATAGAGTTTCTCTCGCTCCTCCTCTaGGGTCTCATAGTAGCGTGTCCACTGAGCCATGGT +
Preference number: 6 (lower is better)
Translates to: ADDIIEFLSLLL*GLIVACPLSHG
Trigger: ACCATGGCTCAGTGGACACGCTACTATGAGACCCCAGAGGAGGAGCGAGAGAAACTCTATAATGTCATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000529006.7
CDS CCA 72 bp CAGGCTGCTTATGGCTTCTGGGAAAAGCAGAGTACCTaGAGGCTCGTTCTTCTACAAGTGTACAGGGATCAC +
Preference number: 6 (lower is better)
Translates to: QAAYGFWEKQST*RLVLLQVYRDH
Trigger: GTGATCCCTGTACACTTGTAGAAGAACGAGCCTCCAGGTACTCTGCTTTTCCCAGAAGCCATAAGCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524657.1
CDS CAA 72 bp TTCTCAACTTCAGACAGCTCCTTTTTGCCGCTGGGATaGTTCTCCTTTTCCCGTACCATGGTGCGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: FSTSDSSFLPLG*FSFSRTMVRSV
Trigger: CACAGAGCGCACCATGGTACGGGAAAAGGAGAACAATCCCAGCGGCAAAAAGGAGCTGTCTGAAGTTGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CAA 72 bp ATAGGAACTCCAGTGAGGGCTAACTTGGGATCGCTGTaGGCAAGCTCCTCCAGCAAAATCTTTCGTTTCCCG +
Preference number: 6 (lower is better)
Translates to: IGTPVRANLGSL*ASSSSKIFRFP
Trigger: CGGGAAACGAAAGATTTTGCTGGAGGAGCTTGCCAACAGCGATCCCAAGTTAGCCCTCACTGGAGTTCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517637.2
ENST00000530342.2
CDS CAA 90 bp AGGAGGACTCAACCACCTGGGCACCAGAGACTAGTTTATTTTCAGTaGGCCTATACTTGGCCTCCCCGGTCCTTTCTAATCTACCTGAAG +
Preference number: 6 (lower is better)
Translates to: RRTQPPGHQRLVYFQ*AYTWPPRSFLIYLK
Trigger: CTTCAGGTAGATTAGAAAGGACCGGGGAGGCCAAGTATAGGCCAACTGAAAATAAACTAGTCTCTGGTGCCCAGGTGGTTGAGTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534486.1
CDS TCA 72 bp ATTCTGATCCACCTCTCCACAGAGGGAACATGTGACTaGGTGAGGCAGTCTGGGCTACAAGAGGACAAAGAT +
Preference number: 6 (lower is better)
Translates to: ILIHLSTEGTCD*VRQSGLQEDKD
Trigger: ATCTTTGTCCTCTTGTAGCCCAGACTGCCTCACTCAGTCACATGTTCCCTCTGTGGAGAGGTGGATCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534486.1
CDS CCA 72 bp GTCCTCCTGGTAGCACTTTGGACATTCCCAGCAATTTaGCAATTCTTCGTTAAGCAACCCCTCTCCGTCCAT +
Preference number: 6 (lower is better)
Translates to: VLLVALWTFPAI*QFFVKQPLSVH
Trigger: ATGGACGGAGAGGGGTTGCTTAACGAAGAATTGCCAAATTGCTGGGAATGTCCAAAGTGCTACCAGGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000529124.1
ENST00000530342.2
ENST00000531696.5
ENST00000534486.1
CDS CCA 72 bp CTGGGCTTTCTCCGAGCTGTCCTCCTGGTAGCACTTTaGACATTCCCAGCAATTTGGCAATTCTTCGTTAAG +
Preference number: 6 (lower is better)
Translates to: LGFLRAVLLVAL*TFPAIWQFFVK
Trigger: CTTAACGAAGAATTGCCAAATTGCTGGGAATGTCCAAAGTGCTACCAGGAGGACAGCTCGGAGAAAGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000529124.1
ENST00000530342.2
ENST00000531696.5
CDS CCA 72 bp AGGCTTCGTAATGGGGATGGTAGGAACCCGCACCTTTaGCCGAGTGGGGAATTTAAGCTTTACATCAGCAAT +
Preference number: 6 (lower is better)
Translates to: RLRNGDGRNPHL*PSGEFKLYISN
Trigger: ATTGCTGATGTAAAGCTTAAATTCCCCACTCGGCCAAAGGTGCGGGTTCCTACCATCCCCATTACGAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525041.5
CDS CAA 72 bp CAACCACCTGGGCACCAGAGACTAGTTTATTTTCAGTaGGCCTATACTTGGCCTCCCCGGTCCTTTCTAATC +
Preference number: 6 (lower is better)
Translates to: QPPGHQRLVYFQ*AYTWPPRSFLI
Trigger: GATTAGAAAGGACCGGGGAGGCCAAGTATAGGCCAACTGAAAATAAACTAGTCTCTGGTGCCCAGGTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534486.1
CDS CAA 90 bp GCAATGAGAGCATCTTCATCTTCTATCCCTGTGGGGACACATTTCTaGTGCAGTGGCAGAGACTCCAACTTATCTACAAGGCAGCGAAGG +
Preference number: 6 (lower is better)
Translates to: AMRASSSSIPVGTHF*CSGRDSNLSTRQRR
Trigger: CCTTCGCTGCCTTGTAGATAAGTTGGAGTCTCTGCCACTGCACAAGAAATGTGTCCCCACAGGGATAGAAGATGAAGATGCTCTCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000531696.5
CDS CAA 90 bp TCCCTTTTTGGCCACTGTACTATAGGAACTCCAGTGAGGGCTAACTaGGGATCGCTGTTGGCAAGCTCCTCCAGCAAAATCTTTCGTTTC +
Preference number: 6 (lower is better)
Translates to: SLFGHCTIGTPVRAN*GSLLASSSSKIFRF
Trigger: GAAACGAAAGATTTTGCTGGAGGAGCTTGCCAACAGCGATCCCAAGTTAGCCCTCACTGGAGTTCCTATAGTACAGTGGCCAAAAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517637.2
ENST00000530342.2
CDS TCA 72 bp TGTGATAGAAGGGAAGAGAACTCGCCTTCATTAACTTaGTCAGTGGAGCTCCCATCACAGGCTGCTTATGGC +
Preference number: 6 (lower is better)
Translates to: CDRREENSPSLT*SVELPSQAAYG
Trigger: GCCATAAGCAGCCTGTGATGGGAGCTCCACTGATCAAGTTAATGAAGGCGAGTTCTCTTCCCTTCTATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524657.1
CDS GCA 72 bp GCAGGGCGCATCACTTACTTCTGCACTTTAGGGTACTaGATCTCCAAGATGGCATTTGTTGATTCAGTCTGG +
Preference number: 6 (lower is better)
Translates to: AGRITYFCTLGY*ISKMAFVDSVW
Trigger: CCAGACTGAATCAACAAATGCCATCTTGGAGATGCAGTACCCTAAAGTGCAGAAGTAAGTGATGCGCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528380.1
CDS CCA 72 bp ATCTTCTATCCCTGTGGGGACACATTTCTTGTGCAGTaGCAGAGACTCCAACTTATCTACAAGGCAGCGAAG +
Preference number: 6 (lower is better)
Translates to: IFYPCGDTFLVQ*QRLQLIYKAAK
Trigger: CTTCGCTGCCTTGTAGATAAGTTGGAGTCTCTGCCACTGCACAAGAAATGTGTCCCCACAGGGATAGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000531696.5
CDS CAA 72 bp ATAGGAACTCCAGTGAGGGCTAACTTGGGATCGCTGTaGGCAAGCTCCTCCAGCAAAATCTTTACATCAGCA +
Preference number: 6 (lower is better)
Translates to: IGTPVRANLGSL*ASSSSKIFTSA
Trigger: TGCTGATGTAAAGATTTTGCTGGAGGAGCTTGCCAACAGCGATCCCAAGTTAGCCCTCACTGGAGTTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
ENST00000531696.5
CDS CAA 90 bp CACTGTACTATAGGAACTCCAGTGAGGGCTAACTTGGGATCGCTGTaGGCAAGCTCCTCCAGCAAAATCTTTACATCAGCAATGAGAGCA +
Preference number: 6 (lower is better)
Translates to: HCTIGTPVRANLGSL*ASSSSKIFTSAMRA
Trigger: TGCTCTCATTGCTGATGTAAAGATTTTGCTGGAGGAGCTTGCCAACAGCGATCCCAAGTTAGCCCTCACTGGAGTTCCTATAGTACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
ENST00000531696.5
CDS CAA 90 bp CCTGAAGGAGTTAGATATTCTGCCTCTGGGAAAATCCGGATTTACTaGAATATTCTGGAATCTCCCAGAGCACATAGGGCAGGGCAGTCC +
Preference number: 6 (lower is better)
Translates to: PEGVRYSASGKIRIY*NILESPRAHRAGQS
Trigger: GGACTGCCCTGCCCTATGTGCTCTGGGAGATTCCAGAATATTCAAGTAAATCCGGATTTTCCCAGAGGCAGAATATCTAACTCCTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS GCA 72 bp TCTTCATCTTCTATCCCTGTGGGGACACATTTCTTGTaGAGTGGCAGAGACTCCAACTTATCTACAAGGCAG +
Preference number: 6 (lower is better)
Translates to: SSSSIPVGTHFL*SGRDSNLSTRQ
Trigger: CTGCCTTGTAGATAAGTTGGAGTCTCTGCCACTGCACAAGAAATGTGTCCCCACAGGGATAGAAGATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000531696.5
CDS GCA 72 bp AAAGTCTCTTGTCGCAGCACCATTTATACCACGTCTTaGACACTCGCATACATTCACAAAGTTCTCTGCGGC +
Preference number: 6 (lower is better)
Translates to: KVSCRSTIYTTS*TLAYIHKVLCG
Trigger: GCCGCAGAGAACTTTGTGAATGTATGCGAGTGTGCAAGACGTGGTATAAATGGTGCTGCGACAAGAGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CCA 72 bp CACCAGAGACTAGTTTATTTTCAGTTGGCCTATACTTaGCCTCCCCGGTCCTTTCTAATCTACCTGAAGAGG +
Preference number: 6 (lower is better)
Translates to: HQRLVYFQLAYT*PPRSFLIYLKR
Trigger: CCTCTTCAGGTAGATTAGAAAGGACCGGGGAGGCCAAGTATAGGCCAACTGAAAATAAACTAGTCTCTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534486.1
CDS CAA 72 bp GCATCTTCATCTTCTATCCCTGTGGGGACACATTTCTaGTGCAGTGGCAGAGACTCCAACTTATCTACAAGG +
Preference number: 6 (lower is better)
Translates to: ASSSSIPVGTHF*CSGRDSNLSTR
Trigger: CCTTGTAGATAAGTTGGAGTCTCTGCCACTGCACAAGAAATGTGTCCCCACAGGGATAGAAGATGAAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000525041.5
ENST00000526258.5
ENST00000529006.7
ENST00000531696.5
CDS CAA 72 bp CAAAGTCTCTTGTCGCAGCACCATTTATACCACGTCTaGCACACTCGCATACATTCACAAAGTTCTCTGCGG +
Preference number: 6 (lower is better)
Translates to: QSLLSQHHLYHV*HTRIHSQSSLR
Trigger: CCGCAGAGAACTTTGTGAATGTATGCGAGTGTGCAAGACGTGGTATAAATGGTGCTGCGACAAGAGACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000526258.5
ENST00000529006.7
ENST00000530342.2
ENST00000531696.5
CDS CAA 72 bp GCACCAGAGACTAGTTTATTTTCAGTTGGCCTATACTaGGCCTCCCCGGTCCTTTCTAATCTACCTGAAGAG +
Preference number: 6 (lower is better)
Translates to: APETSLFSVGLY*ASPVLSNLPEE
Trigger: CTCTTCAGGTAGATTAGAAAGGACCGGGGAGGCCAAGTATAGGCCAACTGAAAATAAACTAGTCTCTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534486.1
CDS TCA 72 bp CCATTTAACTCCAAATCCATGCTGAGGGACTCTTTCTaGAATTCCTTAGTTAGGTGGGAACGGTTGGTTATG +
Preference number: 6 (lower is better)
Translates to: PFNSKSMLRDSF*NSLVRWERLVM
Trigger: CATAACCAACCGTTCCCACCTAACTAAGGAATTTCAGAAAGAGTCCCTCAGCATGGATTTGGAGTTAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
ENST00000531696.5
CDS GCA 72 bp ACACTCATTAGACAGTACTTCTGCACTTTAGGGTACTaGATCTCCAAGATGGCATTTGTTGATTCAGTCTGG +
Preference number: 6 (lower is better)
Translates to: TLIRQYFCTLGY*ISKMAFVDSVW
Trigger: CCAGACTGAATCAACAAATGCCATCTTGGAGATGCAGTACCCTAAAGTGCAGAAGTACTGTCTAATGAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308783.9
ENST00000398645.6
ENST00000526258.5
ENST00000529006.7
CDS CAA 72 bp GTTAGATATTCTGCCTCTGGGAAAATCCGGATTTACTaGAATATTCTGGAATCTCCCAGAGCACATAGGGCA +
Preference number: 6 (lower is better)
Translates to: VRYSASGKIRIY*NILESPRAHRA
Trigger: TGCCCTATGTGCTCTGGGAGATTCCAGAATATTCAAGTAAATCCGGATTTTCCCAGAGGCAGAATATCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530342.2
CDS TCA 72 bp CTTAGGAACCAGATTGCAACACGGAGATTCTGCTCTTaGGTTCTTGTCCAAGTGAGAAGTAAAAGATTCCAA +
Preference number: 6 (lower is better)
Translates to: LRNQIATRRFCS*VLVQVRSKRFQ
Trigger: TTGGAATCTTTTACTTCTCACTTGGACAAGAACTCAAGAGCAGAATCTCCGTGTTGCAATCTGGTTCCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398645.6
ENST00000527157.1
ENST00000529006.7
ENST00000532436.5
CDS TCA 72 bp CAACACGGAGATTCTGCTCTTGAGTTCTTGTCCAAGTaGGAAGTAAAAGATTCCAAAGCTGAGAGGAATAAT +
Preference number: 6 (lower is better)
Translates to: QHGDSALEFLSK*EVKDSKAERNN
Trigger: ATTATTCCTCTCAGCTTTGGAATCTTTTACTTCTCACTTGGACAAGAACTCAAGAGCAGAATCTCCGTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398645.6
ENST00000527157.1
ENST00000529006.7
ENST00000532436.5
CDS CAA 72 bp GAGGCCTTCACCAATGTATTTGCCAAAAACATTCGTTaGGTCACTATTTGCTGCCTTTTATCTTTAGGGTTT +
Preference number: 6 (lower is better)
Translates to: EAFTNVFAKNIR*VTICCLLSLGF
Trigger: AAACCCTAAAGATAAAAGGCAGCAAATAGTGACCAAACGAATGTTTTTGGCAAATACATTGGTGAAGGCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308783.9