RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCTD15 (Homo sapiens)

Ensembl gene IDs: ENSG00000153885

Ensembl transcript IDs: ENST00000284006.10, ENST00000430256.3, ENST00000587559.5, ENST00000587658.5, ENST00000588637.5, ENST00000588881.5, ENST00000589786.5, ENST00000590385.2, ENST00000590771.5, ENST00000590906.5, ENST00000592210.1, ENST00000592363.1, ENST00000683859.1

Found 624 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCAGGTGGGCACTGAAGCAGGGCCTAGTCCAGGGGTTCCTGCTTaGTTCGAACAGCAGTGGGGGTGGGCTGCGGCCGCCGCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: AQVGTEAGPSPGVPA*FEQQWGWAAAAAPP
Trigger: GGGAGGAGCGGCGGCCGCAGCCCACCCCCACTGCTGTTCGAATCAAGCAGGAACCCCTGGACTAGGCCCTGCTTCAGTGCCCACCTGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp CCGGGGCCTCAGAGGATGCTGCGCCAGGCTGCGAAGCTGAGGGGCTaGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCG +
Preference number: 1 (lower is better)
Translates to: PGPQRMLRQAAKLRG*ESWQQRSHRCIFGS
Trigger: CGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCTCAGCTTCGCAGCCTGGCGCAGCATCCTCTGAGGCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR GCA 90 bp CCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCAGCAGCCCAGGTaGCAGTCCACACAGACAGGACTGGAAGCCCCTGGGCAGCAGGTC +
Preference number: 1 (lower is better)
Translates to: PEAGPNGRRLLQQPR*QSTQTGLEAPGQQV
Trigger: GACCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTGTGGACTGGCACCTGGGCTGCTGGAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR CCA 90 bp CATCCCACGTTCTGTTGCCATGACACCTGGGACCCTGGTGCTCGCTaGGCCAGCTTTGGACCCTCCAGCCTCACCCTCGGTCTCATGCCC +
Preference number: 1 (lower is better)
Translates to: HPTFCCHDTWDPGAR*ASFGPSSLTLGLMP
Trigger: GGGCATGAGACCGAGGGTGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR CCA 90 bp CTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTaGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTC +
Preference number: 1 (lower is better)
Translates to: LQACLQHPTFCCHDT*DPGARWASFGPSSL
Trigger: GAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR TCA 90 bp CGTGCTGGGTTCCACCACCAGAGGGACAGAAGTGGCCAGGCCCAGTaGCCCCTCAGGTTAGCAAACCTAGTTGGACGACCCCACCCAGGC +
Preference number: 1 (lower is better)
Translates to: RAGFHHQRDRSGQAQ*PLRLANLVGRPHPG
Trigger: GCCTGGGTGGGGTCGTCCAACTAGGTTTGCTAACCTGAGGGGTCACTGGGCCTGGCCACTTCTGTCCCTCTGGTGGTGGAACCCAGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 90 bp GCGGGACGGTGGCTGAGACCGCCTGCTGTGGCTTTGCGAGTTCTCTaGACTCACTGGCAGGGGTTTGGTGGGAAACGGGGAAGCTTTGGC +
Preference number: 1 (lower is better)
Translates to: AGRWLRPPAVALRVL*THWQGFGGKRGSFG
Trigger: GCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCGGTCTCAGCCACCGTCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp CAGAAGTGGCCAGGCCCAGTGACCCCTCAGGTTAGCAAACCTAGTTaGACGACCCCACCCAGGCCACCATCCTGCTGCCCTCAGGGCCTT +
Preference number: 1 (lower is better)
Translates to: QKWPGPVTPQVSKPS*TTPPRPPSCCPQGL
Trigger: AAGGCCCTGAGGGCAGCAGGATGGTGGCCTGGGTGGGGTCGTCCAACTAGGTTTGCTAACCTGAGGGGTCACTGGGCCTGGCCACTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp GAGTCCACACCGCCCCCACAGGACGCAGCCACGCTGAAACCCCTCTaGAACAGCCGCTCCAGGACCTGCCCAGGAAGAAACAGAGGTCAT +
Preference number: 1 (lower is better)
Translates to: ESTPPPQDAATLKPL*NSRSRTCPGRNRGH
Trigger: ATGACCTCTGTTTCTTCCTGGGCAGGTCCTGGAGCGGCTGTTCCAGAGGGGTTTCAGCGTGGCTGCGTCCTGTGGGGGCGGTGTGGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 90 bp AGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATaGCACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTC +
Preference number: 1 (lower is better)
Translates to: SPSAGMPPASHVLLP*HLGPWCSLGQLWTL
Trigger: GAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR TCA 90 bp TCTGCGGCCTTGGACAGGGAGCCACTGGTCTGTGCTGCTGTCCCCTaGGGCAGGTCGAAGCTGGTGGCCCTTAGAGGGCAGGTAAAATGG +
Preference number: 1 (lower is better)
Translates to: SAALDREPLVCAAVP*GRSKLVALRGQVKW
Trigger: CCATTTTACCTGCCCTCTAAGGGCCACCAGCTTCGACCTGCCTCAGGGGACAGCAGCACAGACCAGTGGCTCCCTGTCCAAGGCCGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp CCAATTCTTGGACCCATCCAGGAAGAGCCGGTCCAGGGATTCTCTTaGCAGCTGGTGGGTGCCTGCGACTCCCAGGTCAGCAGGGAGAGG +
Preference number: 1 (lower is better)
Translates to: PILGPIQEEPVQGFS*QLVGACDSQVSRER
Trigger: CCTCTCCCTGCTGACCTGGGAGTCGCAGGCACCCACCAGCTGCCAAGAGAATCCCTGGACCGGCTCTTCCTGGATGGGTCCAAGAATTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp CAGAGGATGCTGCGCCAGGCTGCGAAGCTGAGGGGCTGGGAGAGCTaGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAG +
Preference number: 1 (lower is better)
Translates to: QRMLRQAAKLRGWES*QQRSHRCIFGSHQQ
Trigger: CTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCTCAGCTTCGCAGCCTGGCGCAGCATCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR TCA 90 bp TGCAGGTCTCACGCTGGCTGCATGACTTGGTGCCCCCTGGCTGGCTaGGCCACTGCCTGCCACCTTCTCATACCATTACGTGGGGGTCTA +
Preference number: 1 (lower is better)
Translates to: CRSHAGCMTWCPLAG*ATACHLLIPLRGGL
Trigger: TAGACCCCCACGTAATGGTATGAGAAGGTGGCAGGCAGTGGCTCAGCCAGCCAGGGGGCACCAAGTCATGCAGCCAGCGTGAGACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 90 bp GGGAGGAATCCGTTCCGCCCCCAAACCTCCCTGCACAACATCGAATaGGGGAGTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGT +
Preference number: 1 (lower is better)
Translates to: GRNPFRPQTSLHNIE*GSLAAASAQDRASS
Trigger: ACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCATTCGATGTTGTGCAGGGAGGTTTGGGGGCGGAACGGATTCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp GAGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTaGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCC +
Preference number: 1 (lower is better)
Translates to: EGLGELAAEIPPLYL*VASTVLLQACLQHP
Trigger: GGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR CCA 90 bp AGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTaGAGAGGGATAAACAGCTCCTCTGAAGTAGCTGCAGACGGCTCT +
Preference number: 1 (lower is better)
Translates to: SHLSDARRPARVCPA*RGINSSSEVAADGS
Trigger: AGAGCCGTCTGCAGCTACTTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR GCA 90 bp CTGACCGACAGGCTGTGGAATGCGTGCACAGGGGGCCCTCTTCCCTaGAAAGCCCATTCCACCCTAACCCGGAAATGTGCCAAGCTCTTG +
Preference number: 1 (lower is better)
Translates to: LTDRLWNACTGGPLP*KAHSTLTRKCAKLL
Trigger: CAAGAGCTTGGCACATTTCCGGGTTAGGGTGGAATGGGCTTTGCAGGGAAGAGGGCCCCCTGTGCACGCATTCCACAGCCTGTCGGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 90 bp ACCCGTCTCCTGCAACTAGCAAGTTCTGACCGACAGGCTGTGGAATaGGTGCACAGGGGGCCCTCTTCCCTGCAAAGCCCATTCCACCCT +
Preference number: 1 (lower is better)
Translates to: TRLLQLASSDRQAVE*VHRGPSSLQSPFHP
Trigger: AGGGTGGAATGGGCTTTGCAGGGAAGAGGGCCCCCTGTGCACGCATTCCACAGCCTGTCGGTCAGAACTTGCTAGTTGCAGGAGACGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 90 bp GACGCAGCCACGCTGAAACCCCTCTGGAACAGCCGCTCCAGGACCTaGCCAGGAAGAAACAGAGGTCATCAAGGCCAAGCTGCAAGAGGA +
Preference number: 1 (lower is better)
Translates to: DAATLKPLWNSRSRT*PGRNRGHQGQAARG
Trigger: TCCTCTTGCAGCTTGGCCTTGATGACCTCTGTTTCTTCCTGGGCAGGTCCTGGAGCGGCTGTTCCAGAGGGGTTTCAGCGTGGCTGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 90 bp TCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTaGCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGA +
Preference number: 1 (lower is better)
Translates to: STVLLQACLQHPTFC*HDTWDPGARWASFG
Trigger: TCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR GCA 90 bp TCACGCTGGCTGCATGACTTGGTGCCCCCTGGCTGGCTGAGCCACTaGCTGCCACCTTCTCATACCATTACGTGGGGGTCTAAAGAGGAC +
Preference number: 1 (lower is better)
Translates to: SRWLHDLVPPGWLSH*LPPSHTITWGSKED
Trigger: GTCCTCTTTAGACCCCCACGTAATGGTATGAGAAGGTGGCAGGCAGTGGCTCAGCCAGCCAGGGGGCACCAAGTCATGCAGCCAGCGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp CCCTACAGAACCACGTGCTGGGTTCCACCACCAGAGGGACAGAAGTaGCCAGGCCCAGTGACCCCTCAGGTTAGCAAACCTAGTTGGACG +
Preference number: 1 (lower is better)
Translates to: PYRTTCWVPPPEGQK*PGPVTPQVSKPSWT
Trigger: CGTCCAACTAGGTTTGCTAACCTGAGGGGTCACTGGGCCTGGCCACTTCTGTCCCTCTGGTGGTGGAACCCAGCACGTGGTTCTGTAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp CAGCAAATTCGATTGTACAGTGGGATGGCGTCTGCTCTGCGGCCTTaGACAGGGAGCCACTGGTCTGTGCTGCTGTCCCCTGAGGCAGGT +
Preference number: 1 (lower is better)
Translates to: QQIRLYSGMASALRP*TGSHWSVLLSPEAG
Trigger: ACCTGCCTCAGGGGACAGCAGCACAGACCAGTGGCTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 90 bp GGAGAGTTCCCTGTCCTTCAGCCTCTAGGCATCCACCAGCTTCCCTaGGCTGTGCATTCCAGGTGGTTTGAAGCCTGGGGGTGCATCAGC +
Preference number: 1 (lower is better)
Translates to: GEFPVLQPLGIHQLP*AVHSRWFEAWGCIS
Trigger: GCTGATGCACCCCCAGGCTTCAAACCACCTGGAATGCACAGCTCAGGGAAGCTGGTGGATGCCTAGAGGCTGAAGGACAGGGAACTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 90 bp CTGACCTTCCTCCACCACTGCTGCGGGTTATTCCTCGATGGGAACTaGAGGATCCAAGGGAGGAATCCGTTCCGCCCCCAAACCTCCCTG +
Preference number: 1 (lower is better)
Translates to: LTFLHHCCGLFLDGN*RIQGRNPFRPQTSL
Trigger: CAGGGAGGTTTGGGGGCGGAACGGATTCCTCCCTTGGATCCTTCAGTTCCCATCGAGGAATAACCCGCAGCAGTGGTGGAGGAAGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 90 bp CAGGTTAGCAAACCTAGTTGGACGACCCCACCCAGGCCACCATCCTaGTGCCCTCAGGGCCTTGATTCCGGGAGGCAAAAAGAGGCTTTG +
Preference number: 1 (lower is better)
Translates to: QVSKPSWTTPPRPPS*CPQGLDSGRQKEAL
Trigger: CAAAGCCTCTTTTTGCCTCCCGGAATCAAGGCCCTGAGGGCAGCAGGATGGTGGCCTGGGTGGGGTCGTCCAACTAGGTTTGCTAACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 90 bp ACTGAAGGATCCAAGGGAGGAATCCGTTCCGCCCCCAAACCTCCCTaGACAACATCGAATGCGGGAGTCTGGCTGCTGCTTCTGCACAGG +
Preference number: 1 (lower is better)
Translates to: TEGSKGGIRSAPKPP*TTSNAGVWLLLLHR
Trigger: CCTGTGCAGAAGCAGCAGCCAGACTCCCGCATTCGATGTTGTGCAGGGAGGTTTGGGGGCGGAACGGATTCCTCCCTTGGATCCTTCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp CGTTCCGCCCCCAAACCTCCCTGCACAACATCGAATGCGGGAGTCTaGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCTTG +
Preference number: 1 (lower is better)
Translates to: RSAPKPPCTTSNAGV*LLLLHRTEPPVFCL
Trigger: CAAGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCATTCGATGTTGTGCAGGGAGGTTTGGGGGCGGAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp CCAGCCACTGACCTTCCTCCACCACTGCTGCGGGTTATTCCTCGATaGGAACTGAAGGATCCAAGGGAGGAATCCGTTCCGCCCCCAAAC +
Preference number: 1 (lower is better)
Translates to: PATDLPPPLLRVIPR*ELKDPREESVPPPN
Trigger: GTTTGGGGGCGGAACGGATTCCTCCCTTGGATCCTTCAGTTCCCATCGAGGAATAACCCGCAGCAGTGGTGGAGGAAGGTCAGTGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp TGGCTGAGACCGCCTGCTGTGGCTTTGCGAGTTCTCTGCACTCACTaGCAGGGGTTTGGTGGGAAACGGGGAAGCTTTGGCATGGTTCTG +
Preference number: 1 (lower is better)
Translates to: WLRPPAVALRVLCTH*QGFGGKRGSFGMVL
Trigger: CAGAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCGGTCTCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 90 bp ACGATCTCAGTCTTGCTCACTGACAAAGGTCCCTACAGAACCACGTaGTGGGTTCCACCACCAGAGGGACAGAAGTGGCCAGGCCCAGTG +
Preference number: 1 (lower is better)
Translates to: TISVLLTDKGPYRTT*WVPPPEGQKWPGPV
Trigger: CACTGGGCCTGGCCACTTCTGTCCCTCTGGTGGTGGAACCCAGCACGTGGTTCTGTAGGGACCTTTGTCAGTGAGCAAGACTGAGATCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 90 bp CCACCGCTGTATCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATaGCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACCCT +
Preference number: 1 (lower is better)
Translates to: PPLYLWVASTVLLQA*LQHPTFCCHDTWDP
Trigger: AGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGATACAGCGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR GCA 90 bp AGTTTGTCCAGCAAATTCGATTGTACAGTGGGATGGCGTCTGCTCTaGGGCCTTGGACAGGGAGCCACTGGTCTGTGCTGCTGTCCCCTG +
Preference number: 1 (lower is better)
Translates to: SLSSKFDCTVGWRLL*GLGQGATGLCCCPL
Trigger: CAGGGGACAGCAGCACAGACCAGTGGCTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp ATCTCAGTCTTGCTCACTGACAAAGGTCCCTACAGAACCACGTGCTaGGTTCCACCACCAGAGGGACAGAAGTGGCCAGGCCCAGTGACC +
Preference number: 1 (lower is better)
Translates to: ISVLLTDKGPYRTTC*VPPPEGQKWPGPVT
Trigger: GGTCACTGGGCCTGGCCACTTCTGTCCCTCTGGTGGTGGAACCCAGCACGTGGTTCTGTAGGGACCTTTGTCAGTGAGCAAGACTGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 90 bp GCCAGCAAGGGCACCTTCTCCTGTGACGATCTCAGTCTTGCTCACTaGCAAAGGTCCCTACAGAACCACGTGCTGGGTTCCACCACCAGA +
Preference number: 1 (lower is better)
Translates to: ASKGTFSCDDLSLAH*QRSLQNHVLGSTTR
Trigger: TCTGGTGGTGGAACCCAGCACGTGGTTCTGTAGGGACCTTTGTCAGTGAGCAAGACTGAGATCGTCACAGGAGAAGGTGCCCTTGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 90 bp GGGCCCTCTTCCCTGCAAAGCCCATTCCACCCTAACCCGGAAATGTaGCAAGCTCTTGGGTCTGCGAAGAGCTGTTGGAAAATAGGCCCT +
Preference number: 1 (lower is better)
Translates to: GPSSLQSPFHPNPEM*QALGSAKSCWKIGP
Trigger: AGGGCCTATTTTCCAACAGCTCTTCGCAGACCCAAGAGCTTGGCACATTTCCGGGTTAGGGTGGAATGGGCTTTGCAGGGAAGAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp AGCCATATACAAGTCTACAGCCATTGTACACAGGATGGTGATGGCTaGGGAGCCCCGCCCACCAGTCCTCTGCAGTTTCTCCACCGGAGA +
Preference number: 1 (lower is better)
Translates to: SHIQVYSHCTQDGDG*GAPPTSPLQFLHRR
Trigger: TCTCCGGTGGAGAAACTGCAGAGGACTGGTGGGCGGGGCTCCCCAGCCATCACCATCCTGTGTACAATGGCTGTAGACTTGTATATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR CCA 90 bp GCCTGCTGTGGCTTTGCGAGTTCTCTGCACTCACTGGCAGGGGTTTaGTGGGAAACGGGGAAGCTTTGGCATGGTTCTGTCCAGTTGCTT +
Preference number: 1 (lower is better)
Translates to: ACCGFASSLHSLAGV*WETGKLWHGSVQLL
Trigger: AAGCAACTGGACAGAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 90 bp CTTGGGTCTGCGAAGAGCTGTTGGAAAATAGGCCCTCACTCCATCTaGGCTGTCCAATTCTTGGACCCATCCAGGAAGAGCCGGTCCAGG +
Preference number: 1 (lower is better)
Translates to: LGSAKSCWKIGPHSI*AVQFLDPSRKSRSR
Trigger: CCTGGACCGGCTCTTCCTGGATGGGTCCAAGAATTGGACAGCTCAGATGGAGTGAGGGCCTATTTTCCAACAGCTCTTCGCAGACCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 90 bp GCAGCTGGTCCACCCTGCAGCCATGCTGCACGTCTGACTGAGAACTaGGCACCAGATAAAGAAGCATTGGTCCTTGTCAGCCTCTCTGAC +
Preference number: 1 (lower is better)
Translates to: AAGPPCSHAARLTEN*APDKEALVLVSLSD
Trigger: GTCAGAGAGGCTGACAAGGACCAATGCTTCTTTATCTGGTGCTCAGTTCTCAGTCAGACGTGCAGCATGGCTGCAGGGTGGACCAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR GCA 90 bp CAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAGTCCTTCTaGAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCT +
Preference number: 1 (lower is better)
Translates to: QRSHRCIFGSHQQSF*RHASSIPRSVAMTP
Trigger: AGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR TCA 90 bp CTGAATGCCAGGCAGCTGGTCCACCCTGCAGCCATGCTGCACGTCTaGCTGAGAACTGAGCACCAGATAAAGAAGCATTGGTCCTTGTCA +
Preference number: 1 (lower is better)
Translates to: LNARQLVHPAAMLHV*LRTEHQIKKHWSLS
Trigger: TGACAAGGACCAATGCTTCTTTATCTGGTGCTCAGTTCTCAGTCAGACGTGCAGCATGGCTGCAGGGTGGACCAGCTGCCTGGCATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR GCA 90 bp TATCAAGTTTGTCCAGCAAATTCGATTGTACAGTGGGATGGCGTCTaGTCTGCGGCCTTGGACAGGGAGCCACTGGTCTGTGCTGCTGTC +
Preference number: 1 (lower is better)
Translates to: YQVCPANSIVQWDGV*SAALDREPLVCAAV
Trigger: GACAGCAGCACAGACCAGTGGCTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACAAACTTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 90 bp TTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGATGGTaGTGGCTGGGGAGCCCCGCCCACCAGTCCTCTGCAGTTTCTCCA +
Preference number: 1 (lower is better)
Translates to: LKEPYTSLQPLYTGW*WLGSPAHQSSAVSP
Trigger: TGGAGAAACTGCAGAGGACTGGTGGGCGGGGCTCCCCAGCCATCACCATCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR CCA 90 bp AGAAACCTATCAAGTTTGTCCAGCAAATTCGATTGTACAGTGGGATaGCGTCTGCTCTGCGGCCTTGGACAGGGAGCCACTGGTCTGTGC +
Preference number: 1 (lower is better)
Translates to: RNLSSLSSKFDCTVG*RLLCGLGQGATGLC
Trigger: GCACAGACCAGTGGCTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACAAACTTGATAGGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp AGCAGAGAAACCTATCAAGTTTGTCCAGCAAATTCGATTGTACAGTaGGATGGCGTCTGCTCTGCGGCCTTGGACAGGGAGCCACTGGTC +
Preference number: 1 (lower is better)
Translates to: SRETYQVCPANSIVQ*DGVCSAALDREPLV
Trigger: GACCAGTGGCTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACAAACTTGATAGGTTTCTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp TGCTGTGGCTTTGCGAGTTCTCTGCACTCACTGGCAGGGGTTTGGTaGGAAACGGGGAAGCTTTGGCATGGTTCTGTCCAGTTGCTTATA +
Preference number: 1 (lower is better)
Translates to: CCGFASSLHSLAGVW*ETGKLWHGSVQLLI
Trigger: TATAAGCAACTGGACAGAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 90 bp GGAGTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTaGTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGT +
Preference number: 1 (lower is better)
Translates to: GVWLLLLHRTEPPVF*LRASFMAWTGNAMC
Trigger: ACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 90 bp TCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCTTaGGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCAC +
Preference number: 1 (lower is better)
Translates to: SGCCFCTGQSLQSFA*EHHLWHGLGTQCVH
Trigger: GTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 90 bp GGTCTGCCTGTGTCTGGGTCTCATCGGCAGGCTAGTGTAACAACGTaGATTAAAACTGTGCATATTCGCATGAGAAAACTGGAGCTGGGG +
Preference number: 1 (lower is better)
Translates to: GLPVSGSHRQASVTT*IKTVHIRMRKLELG
Trigger: CCCCAGCTCCAGTTTTCTCATGCGAATATGCACAGTTTTAATTCACGTTGTTACACTAGCCTGCCGATGAGACCCAGACACAGGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR TCA 90 bp ATCTGGCTAGGGACTGTGAATCAGAATTCAGAATCTGTGCTGCCCTaGGGGGACAGGCACCCAAATGCAATAAATAACACCAAGCTCAGG +
Preference number: 1 (lower is better)
Translates to: IWLGTVNQNSESVLP*GDRHPNAINNTKLR
Trigger: CCTGAGCTTGGTGTTATTTATTGCATTTGGGTGCCTGTCCCCTCAGGGCAGCACAGATTCTGAATTCTGATTCACAGTCCCTAGCCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 90 bp TTCTCCTCCACTCAGATGGGAGCCTCAGATGCCAAAACGCAGATGTaGCAACTAACTATAGGCTCGTTGCTAAGCAGAGAAACCTATCAA +
Preference number: 1 (lower is better)
Translates to: FSSTQMGASDAKTQM*QLTIGSLLSRETYQ
Trigger: TTGATAGGTTTCTCTGCTTAGCAACGAGCCTATAGTTAGTTGGCACATCTGCGTTTTGGCATCTGAGGCTCCCATCTGAGTGGAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp TCTCTGCACTCACTGGCAGGGGTTTGGTGGGAAACGGGGAAGCTTTaGCATGGTTCTGTCCAGTTGCTTATAATCAAGAATAATGAGTTT +
Preference number: 1 (lower is better)
Translates to: SLHSLAGVWWETGKL*HGSVQLLIIKNNEF
Trigger: AAACTCATTATTCTTGATTATAAGCAACTGGACAGAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp AGGACAGAGCCTCCAGTCTTTTGCTTGAGAGCATCATTTATGGCATaGACTGGGAACGCAATGTGTTCACACAAATGCACGACAATTGTA +
Preference number: 1 (lower is better)
Translates to: RTEPPVFCLRASFMA*TGNAMCSHKCTTIV
Trigger: TACAATTGTCGTGCATTTGTGTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACTGGAGGCTCTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 90 bp AGAGCCTCCAGTCTTTTGCTTGAGAGCATCATTTATGGCATGGACTaGGAACGCAATGTGTTCACACAAATGCACGACAATTGTACATCA +
Preference number: 1 (lower is better)
Translates to: RASSLLLESIIYGMD*ERNVFTQMHDNCTS
Trigger: TGATGTACAATTGTCGTGCATTTGTGTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACTGGAGGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 90 bp GCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCACACAAATaGACGACAATTGTACATCAGCATCTTTACAATATTAAAGGAGCC +
Preference number: 1 (lower is better)
Translates to: ASFMAWTGNAMCSHK*TTIVHQHLYNIKGA
Trigger: GGCTCCTTTAATATTGTAAAGATGCTGATGTACAATTGTCGTGCATTTGTGTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR TCA 90 bp TGGCATGGTTCTGTCCAGTTGCTTATAATCAAGAATAATGAGTTTTaGGGTTTACAAAGAGCAGAAGTAACATTTATACGGCTGGCATTT +
Preference number: 1 (lower is better)
Translates to: WHGSVQLLIIKNNEF*GLQRAEVTFIRLAF
Trigger: AAATGCCAGCCGTATAAATGTTACTTCTGCTCTTTGTAAACCTCAAAACTCATTATTCTTGATTATAAGCAACTGGACAGAACCATGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 90 bp TCTGTTGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTaGGACCCTCCAGCCTCACCCTCGGTCTCATGCCCACGGCCAAGT +
Preference number: 2 (lower is better)
Translates to: SVAMTPGTLVLAGPA*DPPASPSVSCPRPS
Trigger: ACTTGGCCGTGGGCATGAGACCGAGGGTGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR-3UTR CCA 90 bp CGGTGGCTGAGACCGCCTGCTGTGGCTTTGCGAGTTCTCTGCACTCACTGGCAGACACCTGGCTTGGCCTaGCAGGGAGGTGGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: RWLRPPAVALRVLCTHWQTPGLA*QGGGCL
Trigger: CAGGCACCCACCTCCCTGCCAGGCCAAGCCAGGTGT...CTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCGGTCTCAGCCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR TCA 90 bp GCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTAGGACGCAGCCACGCTaGAACCCCTCTGGAACAGCC +
Preference number: 2 (lower is better)
Translates to: ARRPARVCPAWRGINSSSRTQPR*NPSGTA
Trigger: GGCTGTTCCAGAGGGGTTTCAGCGTGGCTGCGTCCT...AGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp CCACACAGACAGGACTGGAAGCCCCTGGGCAGCAGGTCAGGTGACCCGGGGAGTCCTAACCCGGAAATGTaGCAAGCTCTTGGGTCTGCG +
Preference number: 2 (lower is better)
Translates to: PHRQDWKPLGSRSGDPGSPNPEM*QALGSA
Trigger: CGCAGACCCAAGAGCTTGGCACATTTCCGGGTTAGG...ACTCCCCGGGTCACCTGACCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CCA 90 bp ATAAGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGTGCATCAGCTCGTaGGAGCTCTGGAGGGAGAGA +
Preference number: 2 (lower is better)
Translates to: ISHLSDARRPARVCPAWRGCISS*ELWRER
Trigger: TCTCTCCCTCCAGAGCTCCCACGAGCTGATGCACCC...TCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CCA 90 bp GCAGCAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCACCAGAGGGACAGAAGTaGCCAGGCCCAGTGACCCCT +
Preference number: 2 (lower is better)
Translates to: AAGLQGLLRASPHWNQGSPEGQK*PGPVTP
Trigger: AGGGGTCACTGGGCCTGGCCACTTCTGTCCCTCTGG...TGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 90 bp TCCAATTCTTGGACCCATCCAGGAAGAGCCGGTCCAGGGATTCTCTaGGCAGCTGGTGGGTGCCTGCGACTCCCAGGTCAGCAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: SNSWTHPGRAGPGIL*AAGGCLRLPGQQGE
Trigger: CTCTCCCTGCTGACCTGGGAGTCGCAGGCACCCACCAGCTGCCAAGAGAATCCCTGGACCGGCTCTTCCTGGATGGGTCCAAGAATTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR TCA 90 bp CTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACGGCCCTCACTCCATCTaGGCTGTCCAATTCTTGGAC +
Preference number: 2 (lower is better)
Translates to: LSDARRPARVCPAWRGINGPHSI*AVQFLD
Trigger: GTCCAAGAATTGGACAGCTCAGATGGAGTGAGGGCC...GTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR TCA 90 bp ACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCAGCAGCCCAGGGCAACTAGCAAGTTCTaGCCGACAGGCTGTGGAATG +
Preference number: 2 (lower is better)
Translates to: TCSPEAGPNGRRLLQQPRATSKF*PTGCGM
Trigger: CATTCCACAGCCTGTCGGTCAGAACTTGCTAGTTGC...CCTGGGCTGCTGGAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp TCTGCACTCACTGGCAGGGGTTTGGTGGGAAACGGGGAAGCTTTGGCATGGTTCCAGCTGGTGGGTGCCTaGGACTCCCAGGTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: SALTGRGLVGNGEALAWFQLVGA*DSQVSR
Trigger: CCTGCTGACCTGGGAGTCGCAGGCACCCACCAGCTG...GAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp CCAGTCCTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAAGGCCCGACAGGCTGTGGAATaGGTGCACAGGGGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: PVLCSFSTGEHLGSCHKARQAVE*VHRGPS
Trigger: AGAGGGCCCCCTGTGCACGCATTCCACAGCCTGTCG...GGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAGGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp GCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTGTCCTTCTGCAGGCATaGCTCCAGCATCCCACGTTC +
Preference number: 2 (lower is better)
Translates to: ARRPARVCPAWRGINSSSVLLQA*LQHPTF
Trigger: GAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGAC...AGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR-3UTR CCA 90 bp ATAAGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAAGGTGGTTTGAAGCCTaGGGGTGCATCAGCTCGTGG +
Preference number: 2 (lower is better)
Translates to: ISHLSDARRPARVCPAWRRWFEA*GCISSW
Trigger: CCACGAGCTGATGCACCCCCAGGCTTCAAACCACCT...TCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CCA 90 bp CGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCAGACCCTGGTGCTCGCTaGGCCAGCTTTGGACCCTCC +
Preference number: 2 (lower is better)
Translates to: RINSPSAGMPPASHVLLPDPGAR*ASFGPS
Trigger: GGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTC...TGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR-3UTR CCA 90 bp AATGCGGGAGTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCCAGGATGGTGATGGCTaGGGAGCCCCGCCCACCAGT +
Preference number: 2 (lower is better)
Translates to: NAGVWLLLLHRTEPPVFCQDGDG*GAPPTS
Trigger: ACTGGTGGGCGGGGCTCCCCAGCCATCACCATCCTG...GCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR TCA 90 bp CTGTGGCTTTGCGAGTTCTCTGCACTCACTGGCAGGGGTTTGGTGGGAAACGGGAGTGGCCAGGCCCAGTaGCCCCTCAGGTTAGCAAAC +
Preference number: 2 (lower is better)
Translates to: LWLCEFSALTGRGLVGNGSGQAQ*PLRLAN
Trigger: GTTTGCTAACCTGAGGGGTCACTGGGCCTGGCCACT...CCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp CTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACTCCTGCCTCGCCTGTTaGCTGGGTTTAGTTCGAATC +
Preference number: 2 (lower is better)
Translates to: LSDARRPARVCPAWRGINSCLAC*LGLVRI
Trigger: GATTCGAACTAAACCCAGGCAACAGGCGAGGCAGGA...GTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp GAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAGTCCTTGGCAGCTGGTGGGTaGCTGCGACTCCCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: ESWQQRSHRCIFGSHQQSLAAGG*LRLPGQ
Trigger: CTGACCTGGGAGTCGCAGGCACCCACCAGCTGCCAA...GGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp ATAAGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGACATCCCACGTTCTGTTaGCATGACACCTGGGACCCT +
Preference number: 2 (lower is better)
Translates to: ISHLSDARRPARVCPAWRHPTFC*HDTWDP
Trigger: AGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATG...TCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR-3UTR CCA 90 bp CCCACCAGTCCTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAATCTCTTGGCAGCTGGTaGGTGCCTGCGACTCCCAGG +
Preference number: 2 (lower is better)
Translates to: PTSPLQFLHRRTLGELSQSLGSW*VPATPR
Trigger: CCTGGGAGTCGCAGGCACCCACCAGCTGCCAAGAGA...TTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAGGACTGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CCA 90 bp CAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAAGAGAGATGGGCCCCTTCATaGTGGGGCCCATTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: QVCKDSSGPVLTGIRGQERWAPS*WGPFLR
Trigger: CCTCAGGAATGGGCCCCACCATGAAGGGGCCCATCT...CTCTTGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR CAA 90 bp GTTGGACGACCCCACCCAGGCCACCATCCTGCTGCCCTCAGGGCCTaGATTCCGGGAGGCAAAAAGAGGCTTTGGGTCCCTTCTTTATTC +
Preference number: 2 (lower is better)
Translates to: VGRPHPGHHPAALRA*IPGGKKRLWVPSLF
Trigger: GAATAAAGAAGGGACCCAAAGCCTCTTTTTGCCTCCCGGAATCAAGGCCCTGAGGGCAGCAGGATGGTGGCCTGGGTGGGGTCGTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR TCA 90 bp TCTGCACTCACTGGCAGGGGTTTGGTGGGAAACGGGGAAGCTTTGGCATGGTTCCCAGGGGTTCCTGCTTaGTTCGAACAGCAGTGGGGG +
Preference number: 2 (lower is better)
Translates to: SALTGRGLVGNGEALAWFPGVPA*FEQQWG
Trigger: CCCCCACTGCTGTTCGAATCAAGCAGGAACCCCTGG...GAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp CAGCCTGAGCCCCCAACGGCAGCAAACGTGAAGGTCTCAGGTGGTTACAGAATCACTCAGCCTCTGTCCTaGCTCGCCTGTTGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: QPEPPTAANVKVSGGYRITQPLS*LACCLG
Trigger: ACCCAGGCAACAGGCGAGGCAGGACAGAGGCTGAGT...GATTCTGTAACCACCTGAGACCTTCACGTTTGCTGCCGTTGGGGGCTCAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp GCAGCAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCATCACCCTCGGTCTCATaGCCACGGCCAAGTATACAC +
Preference number: 2 (lower is better)
Translates to: AAGLQGLLRASPHWNQGSSPSVS*PRPSIH
Trigger: GTGTATACTTGGCCGTGGGCATGAGACCGAGGGTGA...TGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR-3UTR GCA 90 bp GCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTCATCAACAGTCCTTCTaGAGGCATGCCTCCAGCATC +
Preference number: 2 (lower is better)
Translates to: ARRPARVCPAWRGINSSSHQQSF*RHASSI
Trigger: GATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATG...AGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR-3UTR GCA 90 bp TGCGGGAGTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCTTTGCAGCACACATCCCTaGATCTGTCCCGAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: CGSLAAASAQDRASSLLLCSTHP*ICPESP
Trigger: GGGGCTCTCGGGACAGATGCAGGGATGTGTGCTGCA...AAGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CCA 90 bp CGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCAGTCCAGGGATTCTCTTaGCAGCTGGTGGGTGCCTGC +
Preference number: 2 (lower is better)
Translates to: RINSPSAGMPPASHVLLPVQGFS*QLVGAC
Trigger: GCAGGCACCCACCAGCTGCCAAGAGAATCCCTGGAC...TGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CCA 90 bp CTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTGTGTCTGGGTCTCATCGGCATACAGAACCACGTGCTaGGTTCCACCACCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: LESGVKSARSACVWVSSAYRTTC*VPPPEG
Trigger: TCCCTCTGGTGGTGGAACCCAGCACGTGGTTCTGTA...TGCCGATGAGACCCAGACACAGGCAGACCTGGCGCTCTTGACCCCTGATTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 90 bp CTGGGGCAGCCAGCAAGGGCACCTTCTCCTGTGACGATCTCAGTCTaGCTCACTGACAAAGGTCCCTACAGAACCACGTGCTGGGTTCCA +
Preference number: 2 (lower is better)
Translates to: LGQPARAPSPVTISV*LTDKGPYRTTCWVP
Trigger: TGGAACCCAGCACGTGGTTCTGTAGGGACCTTTGTCAGTGAGCAAGACTGAGATCGTCACAGGAGAAGGTGCCCTTGCTGGCTGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 90 bp CGCCTGCTGTGGCTTTGCGAGTTCTCTGCACTCACTGGCAGGGGTTaGGTGGGAAACGGGGAAGCTTTGGCATGGTTCTGTCCAGTTGCT +
Preference number: 2 (lower is better)
Translates to: RLLWLCEFSALTGRG*VGNGEALAWFCPVA
Trigger: AGCAACTGGACAGAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR TCA 90 bp CGGTGGCTGAGACCGCCTGCTGTGGCTTTGCGAGTTCTCTGCACTCACTGGCAGAGTCCTCTCAATATTTaGGTCTCTGCAGGCGTCCAC +
Preference number: 2 (lower is better)
Translates to: RWLRPPAVALRVLCTHWQSPLNI*VSAGVH
Trigger: GTGGACGCCTGCAGAGACTCAAATATTGAGAGGACT...CTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCGGTCTCAGCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp AAATTCGATTGTACAGTGGGATGGCGTCTGCTCTGCGGCCTTGGACAGGGAGCCTCTGGCTGCTGCTTCTaGACAGGACAGAGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: KFDCTVGWRLLCGLGQGASGCCF*TGQSLQ
Trigger: CTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGA...GGCTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTGTACAATCGAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CCA 90 bp GCAGCAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAAGCTCGTGGGAGCTCTaGAGGGAGAGAAAAAGGAGA +
Preference number: 2 (lower is better)
Translates to: AAGLQGLLRASPHWNQGSSSWEL*RERKRR
Trigger: TCTCCTTTTTCTCTCCCTCCAGAGCTCCCACGAGCT...TGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp TTCTCCTCCACTCAGATGGGAGCCTCAGATGCCAAAACGCAGATGTGCCAACTAGGGGGCCCTCTTCCCTaGAAAGCCCATTCCACCCTA +
Preference number: 2 (lower is better)
Translates to: FSSTQMGASDAKTQMCQLGGPLP*KAHSTL
Trigger: TAGGGTGGAATGGGCTTTGCAGGGAAGAGGGCCCCC...TAGTTGGCACATCTGCGTTTTGGCATCTGAGGCTCCCATCTGAGTGGAGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CCA 90 bp TGCGGGAGTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCTTGAGCTGTCCAATTCTTaGACCCATCCAGGAAGAGCC +
Preference number: 2 (lower is better)
Translates to: CGSLAAASAQDRASSLLLELSNS*THPGRA
Trigger: GGCTCTTCCTGGATGGGTCCAAGAATTGGACAGCTC...AAGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR TCA 90 bp GTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAAAAGCACATACTCGCTaGACTGGGAGGAGTCCACAC +
Preference number: 2 (lower is better)
Translates to: VSCPRPSIHRQNSPALFPKAHTR*TGRSPH
Trigger: GTGTGGACTCCTCCCAGTTCAGCGAGTATGTGCTTT...TGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR TCA 90 bp AAATTCGATTGTACAGTGGGATGGCGTCTGCTCTGCGGCCTTGGACAGGGAGCCCTGTGCATATTCGCATaGGAAAACTGGAGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: KFDCTVGWRLLCGLGQGALCIFA*ENWSWG
Trigger: TCCCCAGCTCCAGTTTTCTCATGCGAATATGCACAG...GGCTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTGTACAATCGAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp TCCTCCACTCAGATGGGAGCCTCAGATGCCAAAACGCAGATGTGCCAACTAACTAGCCGCTCCAGGACCTaGCCAGGAAGAAACAGAGGT +
Preference number: 2 (lower is better)
Translates to: SSTQMGASDAKTQMCQLTSRSRT*PGRNRG
Trigger: ACCTCTGTTTCTTCCTGGGCAGGTCCTGGAGCGGCT...AGTTAGTTGGCACATCTGCGTTTTGGCATCTGAGGCTCCCATCTGAGTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp CCTATCAAGTTTGTCCAGCAAATTCGATTGTACAGTGGGATGGCGTCTGCTCTGGCCACTGGTCTGTGCTaGTGTCCCCTGAGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: PIKFVQQIRLYSGMASALATGLC*CPLRQV
Trigger: GACCTGCCTCAGGGGACAGCAGCACAGACCAGTGGC...CAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACAAACTTGATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CCA 90 bp AAATTCGATTGTACAGTGGGATGGCGTCTGCTCTGCGGCCTTGGACAGGGAGCCTCTGCGAAGAGCTGTTaGAAAATAGGCCCTCACTCC +
Preference number: 2 (lower is better)
Translates to: KFDCTVGWRLLCGLGQGASAKSC*KIGPHS
Trigger: GGAGTGAGGGCCTATTTTCCAACAGCTCTTCGCAGA...GGCTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTGTACAATCGAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 90 bp GGGAGTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTaGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTG +
Preference number: 2 (lower is better)
Translates to: GSLAAASAQDRASSL*LESIIYGMDWERNV
Trigger: CACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR TCA 90 bp CCTATCAAGTTTGTCCAGCAAATTCGATTGTACAGTGGGATGGCGTCTGCTCTGCACGTTCTGTTGCCATaGCACCTGGGACCCTGGTGC +
Preference number: 2 (lower is better)
Translates to: PIKFVQQIRLYSGMASALHVLLP*HLGPWC
Trigger: GCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTG...CAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACAAACTTGATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 90 bp GTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCTaGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCA +
Preference number: 2 (lower is better)
Translates to: VWLLLLHRTEPPVFC*RASFMAWTGNAMCS
Trigger: TGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp CCTATCAAGTTTGTCCAGCAAATTCGATTGTACAGTGGGATGGCGTCTGCTCTGATTCAGAATCTGTGCTaGCCTGAGGGGACAGGCACC +
Preference number: 2 (lower is better)
Translates to: PIKFVQQIRLYSGMASALIQNLC*PEGTGT
Trigger: GGTGCCTGTCCCCTCAGGGCAGCACAGATTCTGAAT...CAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACAAACTTGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CCA 90 bp TTCTCCTCCACTCAGATGGGAGCCTCAGATGCCAAAACGCAGATGTGCCAACTAAATGTGCCAAGCTCTTaGGTCTGCGAAGAGCTGTTG +
Preference number: 2 (lower is better)
Translates to: FSSTQMGASDAKTQMCQLNVPSS*VCEELL
Trigger: CAACAGCTCTTCGCAGACCCAAGAGCTTGGCACATT...TAGTTGGCACATCTGCGTTTTGGCATCTGAGGCTCCCATCTGAGTGGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR TCA 90 bp AGTCTTTTGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCGGGCACCTTCTCCTGTaGCGATCTCAGTCTTGCTCA +
Preference number: 2 (lower is better)
Translates to: SLLLESIIYGMDWERNVFGHLLL*RSQSCS
Trigger: TGAGCAAGACTGAGATCGTCACAGGAGAAGGTGCCC...GAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 90 bp CCAACTAACTATAGGCTCGTTGCTAAGCAGAGAAACCTATCAAGTTaGTCCAGCAAATTCGATTGTACAGTGGGATGGCGTCTGCTCTGC +
Preference number: 2 (lower is better)
Translates to: PTNYRLVAKQRNLSS*SSKFDCTVGWRLLC
Trigger: GCAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACAAACTTGATAGGTTTCTCTGCTTAGCAACGAGCCTATAGTTAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CCA 90 bp GCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAATATACCTGACCGACAGGCTGTaGAATGCGTGCACAGGGGGC +
Preference number: 2 (lower is better)
Translates to: AEVTFIRLAFDKRLLIIYLTDRL*NACTGG
Trigger: GCCCCCTGTGCACGCATTCCACAGCCTGTCGGTCAG...GTATATTATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR TCA 90 bp CAAAGAGCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATACTGCCCTCAGGGCCTTaGTTCCGGGAGGCAAAAAGA +
Preference number: 2 (lower is better)
Translates to: QRAEVTFIRLAFDKRLLILPSGP*FREAKR
Trigger: TCTTTTTGCCTCCCGGAATCAAGGCCCTGAGGGCAG...TATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGCTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR TCA 90 bp CAAAGAGCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAGCCATGCTGCACGTCTaGCTGAGAACTGAGCACCAG +
Preference number: 2 (lower is better)
Translates to: QRAEVTFIRLAFDKRLLIAMLHV*LRTEHQ
Trigger: CTGGTGCTCAGTTCTCAGTCAGACGTGCAGCATGGC...TATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 90 bp GCCTCAGATGCCAAAACGCAGATGTGCCAACTAACTATAGGCTCGTaGCTAAGCAGAGAAACCTATCAAGTTTGTCCAGCAAATTCGATT +
Preference number: 2 (lower is better)
Translates to: ASDAKTQMCQLTIGS*LSRETYQVCPANSI
Trigger: AATCGAATTTGCTGGACAAACTTGATAGGTTTCTCTGCTTAGCAACGAGCCTATAGTTAGTTGGCACATCTGCGTTTTGGCATCTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp GCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAATATACCAAGAGCGCCAGGTCTaGCTGTGTCTGGGTCTCATC +
Preference number: 2 (lower is better)
Translates to: AEVTFIRLAFDKRLLIIYQERQV*LCLGLI
Trigger: GATGAGACCCAGACACAGGCAGACCTGGCGCTCTTG...GTATATTATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp AATATTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGATGGTGATGAACTATGTGGGTTTGTaGCTCTGTGAGGGTGAGGTC +
Preference number: 2 (lower is better)
Translates to: NIKGAIYKSTAIVHRMVMNYVGL*LCEGEV
Trigger: GACCTCACCCTCACAGAGGCACAAACCCACATAGTT...CATCACCATCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp AGTCTTTTGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCCAATATTTGAGTCTCTaGAGGCGTCCACAACTATGT +
Preference number: 2 (lower is better)
Translates to: SLLLESIIYGMDWERNVFQYLSL*RRPQLC
Trigger: ACATAGTTGTGGACGCCTGCAGAGACTCAAATATTG...GAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR GCA 90 bp GGGGACATAGTGTTTCCCTATAAATTCAGAAATTCTCTGGTTGATGTAAAATCATTCCTCCACCACTGCTaGGGGTTATTCCTCGATGGG +
Preference number: 2 (lower is better)
Translates to: GDIVFPYKFRNSLVDVKSFLHHC*GLFLDG
Trigger: CCCATCGAGGAATAACCCGCAGCAGTGGTGGAGGAA...TGATTTTACATCAACCAGAGAATTTCTGAATTTATAGGGAAACACTATGTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CCA 90 bp GGGGACATAGTGTTTCCCTATAAATTCAGAAATTCTCTGGTTGATGTAAAATCACGTGAAGGTCTCAGGTaGTTACAGAATCACTCAGCC +
Preference number: 2 (lower is better)
Translates to: GDIVFPYKFRNSLVDVKSREGLR*LQNHSA
Trigger: GGCTGAGTGATTCTGTAACCACCTGAGACCTTCACG...TGATTTTACATCAACCAGAGAATTTCTGAATTTATAGGGAAACACTATGTCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 90 bp TGGCATGGACTGGGAACGCAATGTGTTCACACAAATGCACGACAATaGTACATCAGCATCTTTACAATATTAAAGGAGCCATATACAAGT +
Preference number: 2 (lower is better)
Translates to: WHGLGTQCVHTNARQ*YISIFTILKEPYTS
Trigger: ACTTGTATATGGCTCCTTTAATATTGTAAAGATGCTGATGTACAATTGTCGTGCATTTGTGTGAACACATTGCGTTCCCAGTCCATGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR-3UTR CCA 90 bp ATCTTTACAATATTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGATCCAAAGTCAGACTCTaGGTGTCAAATGAAGCACGC +
Preference number: 2 (lower is better)
Translates to: IFTILKEPYTSLQPLYTGSKVRL*VSNEAR
Trigger: GCGTGCTTCATTTGACACCCAGAGTCTGACTTTGGA...TCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAATATTGTAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CCA 90 bp GCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAATATACGTGAATCTGTTTACATaGAGGCATACTGAGATCTCG +
Preference number: 2 (lower is better)
Translates to: AEVTFIRLAFDKRLLIIYVNLFT*RHTEIS
Trigger: CGAGATCTCAGTATGCCTCCATGTAAACAGATTCAC...GTATATTATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 72 bp AGGAGTCCACACCGCCCCCACAGGACGCAGCCACGCTaGAACCCCTCTGGAACAGCCGCTCCAGGACCTGCC +
Preference number: 3 (lower is better)
Translates to: RSPHRPHRTQPR*NPSGTAAPGPA
Trigger: GGCAGGTCCTGGAGCGGCTGTTCCAGAGGGGTTTCAGCGTGGCTGCGTCCTGTGGGGGCGGTGTGGACTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp TCCAGCAGCCCAGGTGCCAGTCCACACAGACAGGACTaGAAGCCCCTGGGCAGCAGGTCAGGTGACCCGGGG +
Preference number: 3 (lower is better)
Translates to: SSSPGASPHRQD*KPLGSRSGDPG
Trigger: CCCCGGGTCACCTGACCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTGTGGACTGGCACCTGGGCTGCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR TCA 72 bp GGCACTGAAGCAGGGCCTAGTCCAGGGGTTCCTGCTTaGTTCGAACAGCAGTGGGGGTGGGCTGCGGCCGCC +
Preference number: 3 (lower is better)
Translates to: GTEAGPSPGVPA*FEQQWGWAAAA
Trigger: GGCGGCCGCAGCCCACCCCCACTGCTGTTCGAATCAAGCAGGAACCCCTGGACTAGGCCCTGCTTCAGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 72 bp CTGGGCAGCAGGTCAGGTGACCCGGGGAGTGCAGCCTaGGCCCCCAACGGCAGCAAACGTGAAGGTCTCAGG +
Preference number: 3 (lower is better)
Translates to: LGSRSGDPGSAA*APNGSKREGLR
Trigger: CCTGAGACCTTCACGTTTGCTGCCGTTGGGGGCTCAGGCTGCACTCCCCGGGTCACCTGACCTGCTGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR GCA 72 bp CTGCTCTGCGGCCTTGGACAGGGAGCCACTGGTCTGTaGTGCTGTCCCCTGAGGCAGGTCGAAGCTGGTGGC +
Preference number: 3 (lower is better)
Translates to: LLCGLGQGATGL*CCPLRQVEAGG
Trigger: GCCACCAGCTTCGACCTGCCTCAGGGGACAGCAGCACAGACCAGTGGCTCCCTGTCCAAGGCCGCAGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp CAGGTGCCAGTCCACACAGACAGGACTGGAAGCCCCTaGGCAGCAGGTCAGGTGACCCGGGGAGTGCAGCCT +
Preference number: 3 (lower is better)
Translates to: QVPVHTDRTGSP*AAGQVTRGVQP
Trigger: AGGCTGCACTCCCCGGGTCACCTGACCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTGTGGACTGGCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR GCA 72 bp GGTCCGAACGGGAGGAGACTTCTCCAGCAGCCCAGGTaGCAGTCCACACAGACAGGACTGGAAGCCCCTGGG +
Preference number: 3 (lower is better)
Translates to: GPNGRRLLQQPR*QSTQTGLEAPG
Trigger: CCCAGGGGCTTCCAGTCCTGTCTGTGTGGACTGGCACCTGGGCTGCTGGAGAAGTCTCCTCCCGTTCGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR GCA 72 bp TGGGCCCCTGTGAGCGGGACGGTGGCTGAGACCGCCTaGTGTGGCTTTGCGAGTTCTCTGCACTCACTGGCA +
Preference number: 3 (lower is better)
Translates to: WAPVSGTVAETA*CGFASSLHSLA
Trigger: TGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCGGTCTCAGCCACCGTCCCGCTCACAGGGGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp GGACCCATCCAGGAAGAGCCGGTCCAGGGATTCTCTTaGCAGCTGGTGGGTGCCTGCGACTCCCAGGTCAGC +
Preference number: 3 (lower is better)
Translates to: GPIQEEPVQGFS*QLVGACDSQVS
Trigger: GCTGACCTGGGAGTCGCAGGCACCCACCAGCTGCCAAGAGAATCCCTGGACCGGCTCTTCCTGGATGGGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp CTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTaGCATGACACCTGGGACCCTGGTGCTCGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: LLQACLQHPTFC*HDTWDPGARWA
Trigger: GGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR GCA 72 bp GGCCCCTTCATGGTGGGGCCCATTCCTGAGGTAACGTaGAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTT +
Preference number: 3 (lower is better)
Translates to: GPFMVGPIPEVT*SPEAGPNGRRL
Trigger: AAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTCAGGAATGGGCCCCACCATGAAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR CCA 72 bp ACAGAGGTCATCAAGGCCAAGCTGCAAGAGGACACCTaGCTTGGCCTGGCAGGGAGGTGGGTGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: TEVIKAKLQEDT*LGLAGRWVPAG
Trigger: CCCAGCAGGCACCCACCTCCCTGCCAGGCCAAGCCAGGTGTCCTCTTGCAGCTTGGCCTTGATGACCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp TGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTaGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCC +
Preference number: 3 (lower is better)
Translates to: CLQHPTFCCHDT*DPGARWASFGP
Trigger: GGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR TCA 72 bp AGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTaGAGTAGCTGCAGACGGCTCTTCCAACCCCGCCCC +
Preference number: 3 (lower is better)
Translates to: SLPRVERDKQLL*SSCRRLFQPRP
Trigger: GGGGCGGGGTTGGAAGAGCCGTCTGCAGCTACTTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR TCA 72 bp CACGCTGGCTGCATGACTTGGTGCCCCCTGGCTGGCTaGGCCACTGCCTGCCACCTTCTCATACCATTACGT +
Preference number: 3 (lower is better)
Translates to: HAGCMTWCPLAG*ATACHLLIPLR
Trigger: ACGTAATGGTATGAGAAGGTGGCAGGCAGTGGCTCAGCCAGCCAGGGGGCACCAAGTCATGCAGCCAGCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp AGGCTGTGGAATGCGTGCACAGGGGGCCCTCTTCCCTaGAAAGCCCATTCCACCCTAACCCGGAAATGTGCC +
Preference number: 3 (lower is better)
Translates to: RLWNACTGGPLP*KAHSTLTRKCA
Trigger: GGCACATTTCCGGGTTAGGGTGGAATGGGCTTTGCAGGGAAGAGGGCCCCCTGTGCACGCATTCCACAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp AGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTaGCCCGCGTGGAGAGGGATAAACAGCTCCTCTGAA +
Preference number: 3 (lower is better)
Translates to: SHLSDARRPARV*PAWRGINSSSE
Trigger: TTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR GCA 72 bp CCGTTCCGCCCCCAAACCTCCCTGCACAACATCGAATaGGGGAGTCTGGCTGCTGCTTCTGCACAGGACAGA +
Preference number: 3 (lower is better)
Translates to: PFRPQTSLHNIE*GSLAAASAQDR
Trigger: TCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCATTCGATGTTGTGCAGGGAGGTTTGGGGGCGGAACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp CTGCATGACTTGGTGCCCCCTGGCTGGCTGAGCCACTaGCTGCCACCTTCTCATACCATTACGTGGGGGTCT +
Preference number: 3 (lower is better)
Translates to: LHDLVPPGWLSH*LPPSHTITWGS
Trigger: AGACCCCCACGTAATGGTATGAGAAGGTGGCAGGCAGTGGCTCAGCCAGCCAGGGGGCACCAAGTCATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp TGGCTGAGACCGCCTGCTGTGGCTTTGCGAGTTCTCTaGACTCACTGGCAGGGGTTTGGTGGGAAACGGGGA +
Preference number: 3 (lower is better)
Translates to: WLRPPAVALRVL*THWQGFGGKRG
Trigger: TCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCGGTCTCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp ACCACGTGCTGGGTTCCACCACCAGAGGGACAGAAGTaGCCAGGCCCAGTGACCCCTCAGGTTAGCAAACCT +
Preference number: 3 (lower is better)
Translates to: TTCWVPPPEGQK*PGPVTPQVSKP
Trigger: AGGTTTGCTAACCTGAGGGGTCACTGGGCCTGGCCACTTCTGTCCCTCTGGTGGTGGAACCCAGCACGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp TCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTaGAGAGGGATAAACAGCTCCTCTGAAGTAGCTGCA +
Preference number: 3 (lower is better)
Translates to: SDARRPARVCPA*RGINSSSEVAA
Trigger: TGCAGCTACTTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR CCA 72 bp CTCGTTCTGTGCTTAGGTGAACTGCAGGTCTCACGCTaGCTGCATGACTTGGTGCCCCCTGGCTGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: LVLCLGELQVSR*LHDLVPPGWLS
Trigger: GCTCAGCCAGCCAGGGGGCACCAAGTCATGCAGCCAGCGTGAGACCTGCAGTTCACCTAAGCACAGAACGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp CCGCCTGCTGTGGCTTTGCGAGTTCTCTGCACTCACTaGCAGGGGTTTGGTGGGAAACGGGGAAGCTTTGGC +
Preference number: 3 (lower is better)
Translates to: PPAVALRVLCTH*QGFGGKRGSFG
Trigger: GCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 72 bp GGGGAGTGCAGCCTGAGCCCCCAACGGCAGCAAACGTaGAGGTCTCAGGTGGTTACAGAATCACTCAGCCCT +
Preference number: 3 (lower is better)
Translates to: GECSLSPQRQQT*RSQVVTESLSP
Trigger: AGGGCTGAGTGATTCTGTAACCACCTGAGACCTTCACGTTTGCTGCCGTTGGGGGCTCAGGCTGCACTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR GCA 72 bp CTGCAACTAGCAAGTTCTGACCGACAGGCTGTGGAATaGGTGCACAGGGGGCCCTCTTCCCTGCAAAGCCCA +
Preference number: 3 (lower is better)
Translates to: LQLASSDRQAVE*VHRGPSSLQSP
Trigger: TGGGCTTTGCAGGGAAGAGGGCCCCCTGTGCACGCATTCCACAGCCTGTCGGTCAGAACTTGCTAGTTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp AAACCTAGTTGGACGACCCCACCCAGGCCACCATCCTaGTGCCCTCAGGGCCTTGATTCCGGGAGGCAAAAA +
Preference number: 3 (lower is better)
Translates to: KPSWTTPPRPPS*CPQGLDSGRQK
Trigger: TTTTTGCCTCCCGGAATCAAGGCCCTGAGGGCAGCAGGATGGTGGCCTGGGTGGGGTCGTCCAACTAGGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp TCCAAGGGAGGAATCCGTTCCGCCCCCAAACCTCCCTaGACAACATCGAATGCGGGAGTCTGGCTGCTGCTT +
Preference number: 3 (lower is better)
Translates to: SKGGIRSAPKPP*TTSNAGVWLLL
Trigger: AAGCAGCAGCCAGACTCCCGCATTCGATGTTGTGCAGGGAGGTTTGGGGGCGGAACGGATTCCTCCCTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp CCCAAACCTCCCTGCACAACATCGAATGCGGGAGTCTaGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTC +
Preference number: 3 (lower is better)
Translates to: PKPPCTTSNAGV*LLLLHRTEPPV
Trigger: GACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCATTCGATGTTGTGCAGGGAGGTTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CAA 90 bp AGGCAGCAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTGTCCTGCCTCGCCTGTaGCCTGGGTTTAGTTCGAAT +
Preference number: 3 (lower is better)
Translates to: RQQVCKDSSGPVLTGIRGVLPRL*PGFSSN
Trigger: ATTCGAACTAAACCCAGGCAACAGGCGAGGCAGGAC...ACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CAA 90 bp TCTGCACTCACTGGCAGGGGTTTGGTGGGAAACGGGGAAGCTTTGGCATGGTTCTCCACCGGAGAACACTaGGGGAGCTGTCACAAGGCC +
Preference number: 3 (lower is better)
Translates to: SALTGRGLVGNGEALAWFSTGEH*GSCHKA
Trigger: GGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGA...GAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp ACGCTGAAACCCCTCTGGAACAGCCGCTCCAGGACCTaGCCAGGAAGAAACAGAGGTCATCAAGGCCAAGCT +
Preference number: 3 (lower is better)
Translates to: TLKPLWNSRSRT*PGRNRGHQGQA
Trigger: AGCTTGGCCTTGATGACCTCTGTTTCTTCCTGGGCAGGTCCTGGAGCGGCTGTTCCAGAGGGGTTTCAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp AGCAAATTCGATTGTACAGTGGGATGGCGTCTGCTCTaGGGCCTTGGACAGGGAGCCACTGGTCTGTGCTGC +
Preference number: 3 (lower is better)
Translates to: SKFDCTVGWRLL*GLGQGATGLCC
Trigger: GCAGCACAGACCAGTGGCTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp TTGCTCACTGACAAAGGTCCCTACAGAACCACGTGCTaGGTTCCACCACCAGAGGGACAGAAGTGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: LLTDKGPYRTTC*VPPPEGQKWPG
Trigger: GCCTGGCCACTTCTGTCCCTCTGGTGGTGGAACCCAGCACGTGGTTCTGTAGGGACCTTTGTCAGTGAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp GGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTaGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTC +
Preference number: 3 (lower is better)
Translates to: GELAAEIPPLYL*VASTVLLQACL
Trigger: GAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR CCA 72 bp CAAGTCTACAGCCATTGTACACAGGATGGTGATGGCTaGGGAGCCCCGCCCACCAGTCCTCTGCAGTTTCTC +
Preference number: 3 (lower is better)
Translates to: QVYSHCTQDGDG*GAPPTSPLQFL
Trigger: GAGAAACTGCAGAGGACTGGTGGGCGGGGCTCCCCAGCCATCACCATCCTGTGTACAATGGCTGTAGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR-3UTR CAA 90 bp GGCCTAGTCCAGGGGTTCCTGCTTGATTCGAACAGCAGTGGGGGTGGGCTGCGGCAAATGAAGCACGCTTaGTTGAAAATACTCTGGGCC +
Preference number: 3 (lower is better)
Translates to: GLVQGFLLDSNSSGGGLRQMKHA*LKILWA
Trigger: GGCCCAGAGTATTTTCAACAAAGCGTGCTTCATTTG...CCGCAGCCCACCCCCACTGCTGTTCGAATCAAGCAGGAACCCCTGGACTAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp GTCTTGCTCACTGACAAAGGTCCCTACAGAACCACGTaGTGGGTTCCACCACCAGAGGGACAGAAGTGGCCA +
Preference number: 3 (lower is better)
Translates to: VLLTDKGPYRTT*WVPPPEGQKWP
Trigger: TGGCCACTTCTGTCCCTCTGGTGGTGGAACCCAGCACGTGGTTCTGTAGGGACCTTTGTCAGTGAGCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp CACCGCTGTATCTTTGGGTCGCATCAACAGTCCTTCTaGAGGCATGCCTCCAGCATCCCACGTTCTGTTGCC +
Preference number: 3 (lower is better)
Translates to: HRCIFGSHQQSF*RHASSIPRSVA
Trigger: GGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGATACAGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
3UTR GCA 72 bp CTCCCTGCACAACATCGAATGCGGGAGTCTGGCTGCTaGTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCT +
Preference number: 3 (lower is better)
Translates to: LPAQHRMRESGC*FCTGQSLQSFA
Trigger: AGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCATTCGATGTTGTGCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp TGTCCAGCAAATTCGATTGTACAGTGGGATGGCGTCTaGTCTGCGGCCTTGGACAGGGAGCCACTGGTCTGT +
Preference number: 3 (lower is better)
Translates to: CPANSIVQWDGV*SAALDREPLVC
Trigger: ACAGACCAGTGGCTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp GACCTTCCTCCACCACTGCTGCGGGTTATTCCTCGATaGGAACTGAAGGATCCAAGGGAGGAATCCGTTCCG +
Preference number: 3 (lower is better)
Translates to: DLPPPLLRVIPR*ELKDPREESVP
Trigger: CGGAACGGATTCCTCCCTTGGATCCTTCAGTTCCCATCGAGGAATAACCCGCAGCAGTGGTGGAGGAAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp GGCTTTGCGAGTTCTCTGCACTCACTGGCAGGGGTTTaGTGGGAAACGGGGAAGCTTTGGCATGGTTCTGTC +
Preference number: 3 (lower is better)
Translates to: GFASSLHSLAGV*WETGKLWHGSV
Trigger: GACAGAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGAGAACTCGCAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 72 bp GGCACCTTCTCCTGTGACGATCTCAGTCTTGCTCACTaGCAAAGGTCCCTACAGAACCACGTGCTGGGTTCC +
Preference number: 3 (lower is better)
Translates to: GTFSCDDLSLAH*QRSLQNHVLGS
Trigger: GGAACCCAGCACGTGGTTCTGTAGGGACCTTTGTCAGTGAGCAAGACTGAGATCGTCACAGGAGAAGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 72 bp AGGCAGCTGGTCCACCCTGCAGCCATGCTGCACGTCTaGCTGAGAACTGAGCACCAGATAAAGAAGCATTGG +
Preference number: 3 (lower is better)
Translates to: RQLVHPAAMLHV*LRTEHQIKKHW
Trigger: CCAATGCTTCTTTATCTGGTGCTCAGTTCTCAGTCAGACGTGCAGCATGGCTGCAGGGTGGACCAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR CCA 72 bp TTTGCGAGTTCTCTGCACTCACTGGCAGGGGTTTGGTaGGAAACGGGGAAGCTTTGGCATGGTTCTGTCCAG +
Preference number: 3 (lower is better)
Translates to: FASSLHSLAGVW*ETGKLWHGSVQ
Trigger: CTGGACAGAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGAGAACTCGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp CACCTTTCCACTCAGCCTCTGTCCTGCCTCGCCTGTTaGCTGGGTTTAGTTCGAATCCAAAGTCAGACTCTG +
Preference number: 3 (lower is better)
Translates to: HLSTQPLSCLAC*LGLVRIQSQTL
Trigger: CAGAGTCTGACTTTGGATTCGAACTAAACCCAGGCAACAGGCGAGGCAGGACAGAGGCTGAGTGGAAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp TCCCTGCAAAGCCCATTCCACCCTAACCCGGAAATGTaGCAAGCTCTTGGGTCTGCGAAGAGCTGTTGGAAA +
Preference number: 3 (lower is better)
Translates to: SLQSPFHPNPEM*QALGSAKSCWK
Trigger: TTTCCAACAGCTCTTCGCAGACCCAAGAGCTTGGCACATTTCCGGGTTAGGGTGGAATGGGCTTTGCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp TCAAGTTTGTCCAGCAAATTCGATTGTACAGTGGGATaGCGTCTGCTCTGCGGCCTTGGACAGGGAGCCACT +
Preference number: 3 (lower is better)
Translates to: SSLSSKFDCTVG*RLLCGLGQGAT
Trigger: AGTGGCTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACAAACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CAA 90 bp AATGCGGGAGTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCCCAGATAAAGAAGCATaGGTCCTTGTCAGCCTCTCT +
Preference number: 3 (lower is better)
Translates to: NAGVWLLLLHRTEPPVFCPDKEA*VLVSLS
Trigger: AGAGAGGCTGACAAGGACCAATGCTTCTTTATCTGG...GCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 72 bp GCGAAGAGCTGTTGGAAAATAGGCCCTCACTCCATCTaGGCTGTCCAATTCTTGGACCCATCCAGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: AKSCWKIGPHSI*AVQFLDPSRKS
Trigger: GCTCTTCCTGGATGGGTCCAAGAATTGGACAGCTCAGATGGAGTGAGGGCCTATTTTCCAACAGCTCTTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp ACCTATCAAGTTTGTCCAGCAAATTCGATTGTACAGTaGGATGGCGTCTGCTCTGCGGCCTTGGACAGGGAG +
Preference number: 3 (lower is better)
Translates to: TYQVCPANSIVQ*DGVCSAALDRE
Trigger: CTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACAAACTTGATAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp TTTGGGTCCCTTCTTTATTCTGTAGGGTGTAACCTATaGCCTCTCTCCAGACACATGGCCCCAAGTGTCCTC +
Preference number: 3 (lower is better)
Translates to: FGSLLYSVGCNL*PLSRHMAPSVL
Trigger: GAGGACACTTGGGGCCATGTGTCTGGAGAGAGGGCATAGGTTACACCCTACAGAATAAAGAAGGGACCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 72 bp TGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCTTaGGAGCATCATTTATGGCATGGACTGGGAACGCAA +
Preference number: 3 (lower is better)
Translates to: CFCTGQSLQSFA*EHHLWHGLGTQ
Trigger: TTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp CAACACTTTCTCCTCCACTCAGATGGGAGCCTCAGATaGCAAAACGCAGATGTGCCAACTAACTATAGGCTC +
Preference number: 3 (lower is better)
Translates to: QHFLLHSDGSLR*QNADVPTNYRL
Trigger: GAGCCTATAGTTAGTTGGCACATCTGCGTTTTGGCATCTGAGGCTCCCATCTGAGTGGAGGAGAAAGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 72 bp GGGACTGTGAATCAGAATTCAGAATCTGTGCTGCCCTaGGGGGACAGGCACCCAAATGCAATAAATAACACC +
Preference number: 3 (lower is better)
Translates to: GTVNQNSESVLP*GDRHPNAINNT
Trigger: GGTGTTATTTATTGCATTTGGGTGCCTGTCCCCTCAGGGCAGCACAGATTCTGAATTCTGATTCACAGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp ACTCAGATGGGAGCCTCAGATGCCAAAACGCAGATGTaGCAACTAACTATAGGCTCGTTGCTAAGCAGAGAA +
Preference number: 3 (lower is better)
Translates to: TQMGASDAKTQM*QLTIGSLLSRE
Trigger: TTCTCTGCTTAGCAACGAGCCTATAGTTAGTTGGCACATCTGCGTTTTGGCATCTGAGGCTCCCATCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp TCACTGGCAGGGGTTTGGTGGGAAACGGGGAAGCTTTaGCATGGTTCTGTCCAGTTGCTTATAATCAAGAAT +
Preference number: 3 (lower is better)
Translates to: SLAGVWWETGKL*HGSVQLLIIKN
Trigger: ATTCTTGATTATAAGCAACTGGACAGAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp GAGAAAAAGGAGAAGTCCTCTCAATATTTGAGTCTCTaGAGGCGTCCACAACTATGTGGGTTTGTGCCTCTG +
Preference number: 3 (lower is better)
Translates to: EKKEKSSQYLSL*RRPQLCGFVPL
Trigger: CAGAGGCACAAACCCACATAGTTGTGGACGCCTGCAGAGACTCAAATATTGAGAGGACTTCTCCTTTTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CCA 72 bp CCTCCAGTCTTTTGCTTGAGAGCATCATTTATGGCATaGACTGGGAACGCAATGTGTTCACACAAATGCACG +
Preference number: 3 (lower is better)
Translates to: PPVFCLRASFMA*TGNAMCSHKCT
Trigger: CGTGCATTTGTGTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CAA 90 bp GCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAATATACGCTGCCCTCAGGGCCTaGATTCCGGGAGGCAAAAAG +
Preference number: 3 (lower is better)
Translates to: AEVTFIRLAFDKRLLIIYAALRA*IPGGKK
Trigger: CTTTTTGCCTCCCGGAATCAAGGCCCTGAGGGCAGC...GTATATTATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 72 bp GTGTCTGGGTCTCATCGGCAGGCTAGTGTAACAACGTaGATTAAAACTGTGCATATTCGCATGAGAAAACTG +
Preference number: 3 (lower is better)
Translates to: VSGSHRQASVTT*IKTVHIRMRKL
Trigger: CAGTTTTCTCATGCGAATATGCACAGTTTTAATTCACGTTGTTACACTAGCCTGCCGATGAGACCCAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR CCA 72 bp AGTCTTTTGCTTGAGAGCATCATTTATGGCATGGACTaGGAACGCAATGTGTTCACACAAATGCACGACAAT +
Preference number: 3 (lower is better)
Translates to: SLLLESIIYGMD*ERNVFTQMHDN
Trigger: ATTGTCGTGCATTTGTGTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR-3UTR CAA 90 bp AATATTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGATGGTGATGATGAAGCACGCTTTGTaGAAAATACTCTGGGCCATT +
Preference number: 3 (lower is better)
Translates to: NIKGAIYKSTAIVHRMVMMKHAL*KILWAI
Trigger: AATGGCCCAGAGTATTTTCAACAAAGCGTGCTTCAT...CATCACCATCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR GCA 72 bp ATGGCATGGACTGGGAACGCAATGTGTTCACACAAATaGACGACAATTGTACATCAGCATCTTTACAATATT +
Preference number: 3 (lower is better)
Translates to: MAWTGNAMCSHK*TTIVHQHLYNI
Trigger: AATATTGTAAAGATGCTGATGTACAATTGTCGTGCATTTGTGTGAACACATTGCGTTCCCAGTCCATGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR-3UTR CAA 90 bp CAAAGAGCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATACTAACTATAGGCTCGTaGCTAAGCAGAGAAACCTAT +
Preference number: 3 (lower is better)
Translates to: QRAEVTFIRLAFDKRLLILTIGS*LSRETY
Trigger: ATAGGTTTCTCTGCTTAGCAACGAGCCTATAGTTAG...TATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR TCA 72 bp ACAAAGAGCAGAAGTAACATTTATACGGCTGGCATTTaGCAAAAGATTGCTGATAATATACTCATTCCAGGA +
Preference number: 3 (lower is better)
Translates to: TKSRSNIYTAGI*QKIADNILIPG
Trigger: TCCTGGAATGAGTATATTATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGCTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CCACACAGACAGGACTGGAAGCCCCTGGGCAGCAGGTCAGGTGACCCGGGGAGTACCCGCTTCTCCAGCTaGGGCGGGAGACCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: PHRQDWKPLGSRSGDPGSTRFSS*GGRPGS
Trigger: GGACCCGGGTCTCCCGCCGCAGCTGGAGAAGCGGGT...ACTCCCCGGGTCACCTGACCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430256.3
CDS-3UTR GCA 90 bp TGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCCTCCGCGGTGCCGGTaGTGCCGTGTGTGTGAAGCG +
Preference number: 4 (lower is better)
Translates to: CHDTWDPGARWASFGPSSPPRCR*CRVCEA
Trigger: CGCTTCACACACACGGCAGCACCGGCACCGCGGAGG...GCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp TGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCTGCTCCTGCTCCTGCTaGCAGCGCTCCAGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: CHDTWDPGARWASFGPSSCSCSC*QRSSSR
Trigger: GCGCGAGCTGGAGCGCTGGCAGCAGGAGCAGGAGCA...GCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp GACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCAGTCACAGGCCCGGCTaGGGCGCCGCTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DARRPARVCPAWRGINSSSHRPG*GAAAPA
Trigger: AGCAGGAGCAGCGGCGCCGCAGCCGGGCCTGTGACT...GGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp ACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCAGCAGCCCAGGCGGGGCCTCAGAGGATaGTGCGCCAGGCTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: TCSPEAGPNGRRLLQQPRRGLRG*CARLRS
Trigger: GCTTCGCAGCCTGGCGCAGCATCCTCTGAGGCCCCG...CCTGGGCTGCTGGAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp CCACACAGACAGGACTGGAAGCCCCTGGGCAGCAGGTCAGGTGACCCGGGGAGTGGCAGGGGGATGCCCTaGGCAGCCAGGGGAGACACA +
Preference number: 4 (lower is better)
Translates to: PHRQDWKPLGSRSGDPGSGRGMP*AARGDT
Trigger: TGTGTCTCCCCTGGCTGCCCAGGGCATCCCCCTGCC...ACTCCCCGGGTCACCTGACCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp ATAAGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGCCTTCTCGCCGCTaGGTGCGATCCGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: ISHLSDARRPARVCPAWRGPSRR*VRSARP
Trigger: TGGGCGAGCGGATCGCACTCAGCGGCGAGAAGGCCC...TCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCTTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp GACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCCCTCCGCGGTGCCGGTaGTGCCGTGTGTGTGAAGCG +
Preference number: 4 (lower is better)
Translates to: DARRPARVCPAWRGINSSPPRCR*CRVCEA
Trigger: CGCTTCACACACACGGCAGCACCGGCACCGCGGAGG...GGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CCCCAGCCCTGCAGGCATCTGGGCCTGAATGCCAGGCAGCTGGTCCACCCTGCATTGGCAGCTGGTGGGTaGCTGCGACTCCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PQPCRHLGLNARQLVHPALAAGG*LRLPGQ
Trigger: CTGACCTGGGAGTCGCAGGCACCCACCAGCTGCCAA...TGCAGGGTGGACCAGCTGCCTGGCATTCAGGCCCAGATGCCTGCAGGGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CCCCAGCCCTGCAGGCATCTGGGCCTGAATGCCAGGCAGCTGGTCCACCCTGCAAACTGGAGCTGGGGATaGCTCCCTGAGCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: PQPCRHLGLNARQLVHPANWSWG*LPELGT
Trigger: GGTCCCCAGCTCAGGGAGCCATCCCCAGCTCCAGTT...TGCAGGGTGGACCAGCTGCCTGGCATTCAGGCCCAGATGCCTGCAGGGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp ATAAGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGTGCTGCCGTGTGTGTaGAGCGAGGACCCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: ISHLSDARRPARVCPAWRVLPCV*SEDPLG
Trigger: GCCGAGCGGGTCCTCGCTTCACACACACGGCAGCAC...TCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCTTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp GCAGCAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAGGGCCTTCTCGCCGCTaGGTGCGATCCGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: AAGLQGLLRASPHWNQGSGPSRR*VRSARP
Trigger: TGGGCGAGCGGATCGCACTCAGCGGCGAGAAGGCCC...TGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp TGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACCCTGGGGCAGCAGGTCAGGTaGCCCGGGGAGTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: CRHASSIPRSVAMTPGTLGQQVR*PGECSL
Trigger: CAGGCTGCACTCCCCGGGTCACCTGACCTGCTGCCC...CAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp GAGGTAACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCAGCAGCCGCGGTGCCGGTGCTaGCGTGTGTGTGAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: EVTCSPEAGPNGRRLLQQPRCRC*RVCEAR
Trigger: CCTCGCTTCACACACACGGCAGCACCGGCACCGCGG...CTGCTGGAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTCCGCGGTGCCGGTGCTaGCGTGTGTGTGAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: LLRASPHWNQGSRAPGLPPRCRC*RVCEAR
Trigger: CCTCGCTTCACACACACGGCAGCACCGGCACCGCGG...AGGCAGACCTGGCGCTCTTGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCGGGAAGCGGATGACGTaGGTGGGGTCCTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: HDTWDPGARWASFGPSSLGKRMT*VGSWFQ
Trigger: CTGGAACCAGGACCCCACGCACGTCATCCGCTTCCC...GAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CCACACAGACAGGACTGGAAGCCCCTGGGCAGCAGGTCAGGTGACCCGGGGAGTGCAGCTGGTCCACCCTaGAGCCATGCTGCACGTCTG +
Preference number: 4 (lower is better)
Translates to: PHRQDWKPLGSRSGDPGSAAGPP*SHAARL
Trigger: CAGACGTGCAGCATGGCTGCAGGGTGGACCAGCTGC...ACTCCCCGGGTCACCTGACCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp AGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATAGCACCCAGCCCCAGTaGGCCCTGGCCCGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: RGWESWQQRSHRCIFGSHSTQPQ*ALARLL
Trigger: CAACAGGCGGGCCAGGGCGCACTGGGGCTGGGTGCT...ATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430256.3
CDS-3UTR CCA 90 bp GACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCACGTGCGTGGGGTCCTaGTTCCAGCCGGCGTTGACG +
Preference number: 4 (lower is better)
Translates to: DARRPARVCPAWRGINSSTCVGS*FQPALT
Trigger: CGTCAACGCCGGCTGGAACCAGGACCCCACGCACGT...GGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp ATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCAACACCTGGCTTGGCCTaGCAGGGAGGTGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: MTPGTLVLAGPALDPPASTPGLA*QGGGCL
Trigger: CAGGCACCCACCTCCCTGCCAGGCCAAGCCAGGTGT...TGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCTCGCTGGGCCAGCTTTaGACCCTCCAGCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: CHDTWDPGARWASFGPSSSLGQL*TLQPHP
Trigger: AGGGTGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGA...GCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp ATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCAACACAGGCGACCGGGTaGGAGACAGCCGGGACATGT +
Preference number: 4 (lower is better)
Translates to: MTPGTLVLAGPALDPPASTQATG*ETAGTC
Trigger: ACATGTCCCGGCTGTCTCTCACCCGGTCGCCTGTGT...TGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp CTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACGTGCATTGGACTTGGTaGGCTGGGCTGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LSDARRPARVCPAWRGINVHWTW*AGLAGG
Trigger: TCCCCCTGCCAGCCCAGCTCACCAAGTCCAATGCAC...GTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp ATTCCTGAGGTAACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCGCCCAAGTCGGGCGTaGCGCGCACCACCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: IPEVTCSPEAGPNGRRLLRPSRA*RAPPGS
Trigger: ACTGCCTGGTGGTGCGCGTCACGCCCGACTTGGGCG...GAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTCAGGAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp CTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACCGCCCAAGTCGGGCGTaGCGCGCACCACCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LLQACLQHPTFCCHDTWDRPSRA*RAPPGS
Trigger: ACTGCCTGGTGGTGCGCGTCACGCCCGACTTGGGCG...GTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp TGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCCAGGGGTTCCTGCTTaGTTCGAACAGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CHDTWDPGARWASFGPSSPGVPA*FEQQWG
Trigger: CCCCCACTGCTGTTCGAATCAAGCAGGAACCCCTGG...GCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp CATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCCACGTTCTGTTGCCATaGCACCTGGGACCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: HDTWDPGARWASFGPSSLHVLLP*HLGPWC
Trigger: GCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTG...GAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACGCCGCCTATGCTCGCTaGGCGGGTCGCTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLQACLQHPTFCCHDTWDAAYAR*AGRSGL
Trigger: GAGACCGGAGCGACCCGCGCAGCGAGCATAGGCGGC...GTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000589786.5
CDS-3UTR GCA 90 bp GTGCTGGGTTCCACCACCAGAGGGACAGAAGTGGCCAGGCCCAGTGACCCCTCAAGGCTGTGGAATGCGTaGACAGGGGGCCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VLGSTTRGTEVARPSDPSRLWNA*TGGPLP
Trigger: GGGAAGAGGGCCCCCTGTGCACGCATTCCACAGCCT...TGAGGGGTCACTGGGCCTGGCCACTTCTGTCCCTCTGGTGGTGGAACCCAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TCTTTGGGCCTGTCGTGGGGGAGGCAGCAGGTCTGCAAGGACTCCTCAGGGCCACCCAGGCCACCATCCTaGTGCCCTCAGGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SLGLSWGRQQVCKDSSGPPRPPS*CPQGLD
Trigger: ATCAAGGCCCTGAGGGCAGCAGGATGGTGGCCTGGG...TGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCTCCCCCACGACAGGCCCAAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CACAGACAGGACTGGAAGCCCCTGGGCAGCAGGTCAGGTGACCCGGGGAGTGCATGCAGCACACATCCCTaGATCTGTCCCGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: HRQDWKPLGSRSGDPGSACSTHP*ICPESP
Trigger: GGGGCTCTCGGGACAGATGCAGGGATGTGTGCTGCA...TGCACTCCCCGGGTCACCTGACCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCTCCTCCCAGCAGCCCTaGAGCACACATCCCTGCATC +
Preference number: 4 (lower is better)
Translates to: HDTWDPGARWASFGPSSLSSQQP*STHPCI
Trigger: GATGCAGGGATGTGTGCTGCAGGGCTGCTGGGAGGA...GAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CCCCAGCCCTGCAGGCATCTGGGCCTGAATGCCAGGCAGCTGGTCCACCCTGCAATTCCTGAGGTAACGTaGAGCCCTGAGGCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: PQPCRHLGLNARQLVHPAIPEVT*SPEAGP
Trigger: CGGACCAGCCTCAGGGCTGCACGTTACCTCAGGAAT...TGCAGGGTGGACCAGCTGCCTGGCATTCAGGCCCAGATGCCTGCAGGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp GGCCTAGTCCAGGGGTTCCTGCTTGATTCGAACAGCAGTGGGGGTGGGCTGCGGGGAGCCACTGGTCTGTaGTGCTGTCCCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GLVQGFLLDSNSSGGGLRGATGL*CCPLRQ
Trigger: CTGCCTCAGGGGACAGCAGCACAGACCAGTGGCTCC...CCGCAGCCCACCCCCACTGCTGTTCGAATCAAGCAGGAACCCCTGGACTAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCGATTCTCTTGGCAGCTaGTGGGTGCCTGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: CHDTWDPGARWASFGPSSDSLGS*WVPATP
Trigger: GGGAGTCGCAGGCACCCACCAGCTGCCAAGAGAATC...GCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp GAGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCAAGGGGCTGGGAGAGCTaGCAGCAGAGATCCCACCGC +
Preference number: 4 (lower is better)
Translates to: EGLGELAAEIPPLYLWVARGWES*QQRSHR
Trigger: GCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT...TGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp GGCCTAGTCCAGGGGTTCCTGCTTGATTCGAACAGCAGTGGGGGTGGGCTGCGGCCACACAGACAGGACTaGAAGCCCCTGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GLVQGFLLDSNSSGGGLRPHRQD*KPLGSR
Trigger: CCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTGTGG...CCGCAGCCCACCCCCACTGCTGTTCGAATCAAGCAGGAACCCCTGGACTAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp GACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCGACGCTGCTGACAGATaGGCCCCTTCATGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DARRPARVCPAWRGINSSDAADR*APSWWG
Trigger: GCCCCACCATGAAGGGGCCCATCTGTCAGCAGCGTC...GGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp ATAAGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGACAGGATGGTGATGGCTaGGGAGCCCCGCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: ISHLSDARRPARVCPAWRQDGDG*GAPPTS
Trigger: ACTGGTGGGCGGGGCTCCCCAGCCATCACCATCCTG...TCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCTTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp CTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACGTGCTGCCGTGTGTGTaGAGCGAGGACCCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: LLQACLQHPTFCCHDTWDVLPCV*SEDPLG
Trigger: GCCGAGCGGGTCCTCGCTTCACACACACGGCAGCAC...GTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp ATAAGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAACACAGGCGACCGGGTaGGAGACAGCCGGGACATGT +
Preference number: 4 (lower is better)
Translates to: ISHLSDARRPARVCPAWRTQATG*ETAGTC
Trigger: ACATGTCCCGGCTGTCTCTCACCCGGTCGCCTGTGT...TCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp AATGCGGGAGTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCGGGCCTTCTCGCCGCTaGGTGCGATCCGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: NAGVWLLLLHRTEPPVFCGPSRR*VRSARP
Trigger: TGGGCGAGCGGATCGCACTCAGCGGCGAGAAGGCCC...GCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp GTGCTGGGTTCCACCACCAGAGGGACAGAAGTGGCCAGGCCCAGTGACCCCTCAAGTGGCCAGGCCCAGTaGCCCCTCAGGTTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: VLGSTTRGTEVARPSDPSSGQAQ*PLRLAN
Trigger: GTTTGCTAACCTGAGGGGTCACTGGGCCTGGCCACT...TGAGGGGTCACTGGGCCTGGCCACTTCTGTCCCTCTGGTGGTGGAACCCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp CTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTAGGACGCAGCCACGCTaGAACCCCTCTGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: LLRASPHWNQGSRAPGLPRTQPR*NPSGTA
Trigger: GGCTGTTCCAGAGGGGTTTCAGCGTGGCTGCGTCCT...AGGCAGACCTGGCGCTCTTGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp TGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCCCGGGGAGTGCAGCCTaGGCCCCCAACGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: CPRPSIHRQNSPALFPGPPGSAA*APNGSK
Trigger: TTTGCTGCCGTTGGGGGCTCAGGCTGCACTCCCCGG...GGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp GCAGCAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAGGTAACGTGCAGCCCTaGGGCTGGTCCGAACGGGAG +
Preference number: 4 (lower is better)
Translates to: AAGLQGLLRASPHWNQGSGNVQP*GWSERE
Trigger: CTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACC...TGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp CCACACAGACAGGACTGGAAGCCCCTGGGCAGCAGGTCAGGTGACCCGGGGAGTCCTAGAAGACGCTGCTaGCAGATGGGCCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: PHRQDWKPLGSRSGDPGSPRRRC*QMGPFM
Trigger: CATGAAGGGGCCCATCTGTCAGCAGCGTCTTCTAGG...ACTCCCCGGGTCACCTGACCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp GACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCTCAGGACCCAGCCACTaGCCTTCCTCCACCACTGCT +
Preference number: 4 (lower is better)
Translates to: DARRPARVCPAWRGINSSSGPSH*PSSTTA
Trigger: AGCAGTGGTGGAGGAAGGTCAGTGGCTGGGTCCTGA...GGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp CATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCGAATCTGTGCTGCCCTaGGGGGACAGGCACCCAAAT +
Preference number: 4 (lower is better)
Translates to: HDTWDPGARWASFGPSSLESVLP*GDRHPN
Trigger: ATTTGGGTGCCTGTCCCCTCAGGGCAGCACAGATTC...GAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCCAGCTTCGCCGCCTATaGTCGCTGCGCGGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: CPRPSIHRQNSPALFPGPQLRRL*SLRGSL
Trigger: GAGCGACCCGCGCAGCGAGCATAGGCGGCGAAGCTG...GGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000589786.5
CDS-3UTR GCA 90 bp CATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACCCTGGTGCTCTTCCTCCCTCCGCGGTaGCGGTGCTGCCGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HASSIPRSVAMTPGTLVLFLPPR*RCCRVC
Trigger: ACACACACGGCAGCACCGGCACCGCGGAGGGAGGAA...GAGCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CCAGTCCTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAAGGCCTGCTCCTGCTCCTGCTaGCAGCGCTCCAGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: PVLCSFSTGEHLGSCHKACSCSC*QRSSSR
Trigger: GCGCGAGCTGGAGCGCTGGCAGCAGGAGCAGGAGCA...GGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAGGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCAAGTCACAGGCCCGGCTaGGGCGCCGCTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RINSPSAGMPPASHVLLPSHRPG*GAAAPA
Trigger: AGCAGGAGCAGCGGCGCCGCAGCCGGGCCTGTGACT...TGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAAGGCCAGGGGGGATGCTGCGCCAGGCTaGGAAGCTGAGGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LCSFSTGEHLGSCHKARGDAAPG*EAEGLG
Trigger: TCCCAGCCCCTCAGCTTCGCAGCCTGGCGCAGCATC...CCCCCTGGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAAGAGCGGGGCCTCAGAGGATaGTGCGCCAGGCTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: QVCKDSSGPVLTGIRGQERGLRG*CARLRS
Trigger: GCTTCGCAGCCTGGCGCAGCATCCTCTGAGGCCCCG...CTCTTGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp TGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCAAGAGCGCCAGGTCTaGCTGTGTCTGGGTCTCATC +
Preference number: 4 (lower is better)
Translates to: CHDTWDPGARWASFGPSSQERQV*LCLGLI
Trigger: GATGAGACCCAGACACAGGCAGACCTGGCGCTCTTG...GCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp GTGCTGGGTTCCACCACCAGAGGGACAGAAGTGGCCAGGCCCAGTGACCCCTCAAGGTCTCACGCTGGCTaGATGACTTGGTGCCCCCTG +
Preference number: 4 (lower is better)
Translates to: VLGSTTRGTEVARPSDPSRSHAG*MTWCPL
Trigger: CAGGGGGCACCAAGTCATGCAGCCAGCGTGAGACCT...TGAGGGGTCACTGGGCCTGGCCACTTCTGTCCCTCTGGTGGTGGAACCCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACCCTGGTGCTCGGATGGCGTCTGCTCTaGGGCCTTGGACAGGGAGCC +
Preference number: 4 (lower is better)
Translates to: HASSIPRSVAMTPGTLVLGWRLL*GLGQGA
Trigger: GGCTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCC...GAGCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp GAGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCACAGTGGGATGGCGTCTaGTCTGCGGCCTTGGACAGG +
Preference number: 4 (lower is better)
Translates to: EGLGELAAEIPPLYLWVAQWDGV*SAALDR
Trigger: CCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTG...TGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAAGAGCCCTGGCCCGCCTGTTaGAGGGGCCTCAGCGATAGC +
Preference number: 4 (lower is better)
Translates to: QVCKDSSGPVLTGIRGQEPWPAC*RGLSDS
Trigger: GCTATCGCTGAGGCCCCTGCAACAGGCGGGCCAGGG...CTCTTGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430256.3
CDS-3UTR CCA 90 bp CCAGTCCTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAAGGCCGGCAGGGGGATGCCCTaGGCAGCCAGGGGAGACACA +
Preference number: 4 (lower is better)
Translates to: PVLCSFSTGEHLGSCHKAGRGMP*AARGDT
Trigger: TGTGTCTCCCCTGGCTGCCCAGGGCATCCCCCTGCC...GGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAGGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp TGTTGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCCCGGAAGCAGCAGCTTaGACGTCCGCAGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: CCHDTWDPGARWASFGPSPEAAA*TSAGSS
Trigger: TGAGCTTCCTGCGGACGTCCAAGCTGCTGCTTCCGG...GGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp GAGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCACTGACCGACAGGCTGTaGAATGCGTGCACAGGGGGC +
Preference number: 4 (lower is better)
Translates to: EGLGELAAEIPPLYLWVALTDRL*NACTGG
Trigger: GCCCCCTGTGCACGCATTCCACAGCCTGTCGGTCAG...TGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCGAACAGCAGTGGGGGTaGGCTGCGGCCGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: HAHGQVYTGRTPQHCFQVEQQWG*AAAAAP
Trigger: AGGAGCGGCGGCCGCAGCCCACCCCCACTGCTGTTC...GACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp CTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAAGGCCAGGGGGGACCCTGGTGCTCGCTaGGCCAGCTTTGGACCCTCC +
Preference number: 4 (lower is better)
Translates to: LCSFSTGEHLGSCHKARGDPGAR*ASFGPS
Trigger: GGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTC...CCCCCTGGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp GCAGCAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAGACCCTGGTGCTCGCTaGGCCAGCTTTGGACCCTCC +
Preference number: 4 (lower is better)
Translates to: AAGLQGLLRASPHWNQGSDPGAR*ASFGPS
Trigger: GGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTC...TGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp AGGCAGCAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTAGGGGCTGGGAGAGCTaGCAGCAGAGATCCCACCGC +
Preference number: 4 (lower is better)
Translates to: RQQVCKDSSGPVLTGIRGRGWES*QQRSHR
Trigger: GCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT...ACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp GAGGTAACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCAGCAGGACGCTGCTGACAGATaGGCCCCTTCATGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: EVTCSPEAGPNGRRLLQQDAADR*APSWWG
Trigger: GCCCCACCATGAAGGGGCCCATCTGTCAGCAGCGTC...CTGCTGGAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp TCTTTGGGCCTGTCGTGGGGGAGGCAGCAGGTCTGCAAGGACTCCTCAGGGCCAGATGGCTCCCTGAGCTaGGGACCTAGAAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: SLGLSWGRQQVCKDSSGPDGSLS*GPRRRC
Trigger: GCAGCGTCTTCTAGGTCCCCAGCTCAGGGAGCCATC...TGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCTCCCCCACGACAGGCCCAAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp ATAAGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGAGGCAGGTCGAAGCTaGTGGCCCTTAGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ISHLSDARRPARVCPAWREAGRS*WPLEGR
Trigger: CCTGCCCTCTAAGGGCCACCAGCTTCGACCTGCCTC...TCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp TCTTTGGGCCTGTCGTGGGGGAGGCAGCAGGTCTGCAAGGACTCCTCAGGGCCACTGCCCTCAGGGCCTTaGTTCCGGGAGGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: SLGLSWGRQQVCKDSSGPLPSGP*FREAKR
Trigger: TCTTTTTGCCTCCCGGAATCAAGGCCCTGAGGGCAG...TGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCTCCCCCACGACAGGCCCAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp CATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCGGGCACCTTCTCCTGTaGCGATCTCAGTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: HDTWDPGARWASFGPSSLGHLLL*RSQSCS
Trigger: TGAGCAAGACTGAGATCGTCACAGGAGAAGGTGCCC...GAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp GAGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCACACGTTCTGTTGCCATaGCACCTGGGACCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: EGLGELAAEIPPLYLWVAHVLLP*HLGPWC
Trigger: GCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTG...TGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp CGGTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCCGGGGAGTGCAGCCTaGGCCCCCAACGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: RSHAHGQVYTGRTPQHCFPGSAA*APNGSK
Trigger: TTTGCTGCCGTTGGGGGCTCAGGCTGCACTCCCCGG...GAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp GCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAGTCCTTCTGGGCAGCAGGTCAGGTaGCCCGGGGAGTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AGSRDPTAVSLGRINSPSGQQVR*PGECSL
Trigger: CAGGCTGCACTCCCCGGGTCACCTGACCTGCTGCCC...AGAAGGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp TCTTTGGGCCTGTCGTGGGGGAGGCAGCAGGTCTGCAAGGACTCCTCAGGGCCACCTAGAAGACGCTGCTaGCAGATGGGCCCCTTCATG +
Preference number: 4 (lower is better)
Translates to: SLGLSWGRQQVCKDSSGPPRRRC*QMGPFM
Trigger: CATGAAGGGGCCCATCTGTCAGCAGCGTCTTCTAGG...TGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCTCCCCCACGACAGGCCCAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp CATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACCCTGGTGCTCTGTGCTGCTGTCCCCTaGGGCAGGTCGAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: HASSIPRSVAMTPGTLVLCAAVP*GRSKLV
Trigger: CACCAGCTTCGACCTGCCTCAGGGGACAGCAGCACA...GAGCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CACTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTGTGTCTGGGTCTCATCGGCGCTCGGCCGCTCCTTaGGGTGAGGCATCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: HWNQGSRAPGLPVSGSHRRSAAP*GEASRL
Trigger: AAGCCTAGATGCCTCACCGCAAGGAGCGGCCGAGCG...CCGATGAGACCCAGACACAGGCAGACCTGGCGCTCTTGACCCCTGATTCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp AAGTGGCCAGGCCCAGTGACCCCTCAGGTTAGCAAACCTAGTTGGACGACCCCATTCCTCCCTCCGCGGTaGCGGTGCTGCCGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KWPGPVTPQVSKPSWTTPFLPPR*RCCRVC
Trigger: ACACACACGGCAGCACCGGCACCGCGGAGGGAGGAA...TGGGGTCGTCCAACTAGGTTTGCTAACCTGAGGGGTCACTGGGCCTGGCCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp ACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCTGGGGTTCCTCCCTCCGCGGTaGCGGTGCTGCCGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: TAKYTQAELPSTVSRSLGFLPPR*RCCRVC
Trigger: ACACACACGGCAGCACCGGCACCGCGGAGGGAGGAA...CCCCAGGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp AGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATGGGAAGCGGATGACGTaGGTGGGGTCCTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RGWESWQQRSHRCIFGSHGKRMT*VGSWFQ
Trigger: CTGGAACCAGGACCCCACGCACGTCATCCGCTTCCC...ATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACGTCCTTCTGCAGGCATaGCTCCAGCATCCCACGTTC +
Preference number: 4 (lower is better)
Translates to: LSDARRPARVCPAWRGINVLLQA*LQHPTF
Trigger: GAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGAC...GTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACGATGCTGCGCCAGGCTaGGAAGCTGAGGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLQACLQHPTFCCHDTWDDAAPG*EAEGLG
Trigger: TCCCAGCCCCTCAGCTTCGCAGCCTGGCGCAGCATC...GTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp AGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATAGACCCGCCAGAGTCTaGCCCGCGTGGAGAGGGATA +
Preference number: 4 (lower is better)
Translates to: RGWESWQQRSHRCIFGSHRPARV*PAWRGI
Trigger: TATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCT...ATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCATTCAGAATCTGTGCTaGCCTGAGGGGACAGGCACC +
Preference number: 4 (lower is better)
Translates to: HDTWDPGARWASFGPSSLIQNLC*PEGTGT
Trigger: GGTGCCTGTCCCCTCAGGGCAGCACAGATTCTGAAT...GAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCTGCCCAGAGTATCGTTaGAAGCCCCAGGCTTTACGC +
Preference number: 4 (lower is better)
Translates to: HDTWDPGARWASFGPSSLCPEYR*KPQALR
Trigger: GCGTAAAGCCTGGGGCTTCCAACGATACTCTGGGCA...GAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp CTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACACGTGCGTGGGGTCCTaGTTCCAGCCGGCGTTGACG +
Preference number: 4 (lower is better)
Translates to: LLQACLQHPTFCCHDTWDTCVGS*FQPALT
Trigger: CGTCAACGCCGGCTGGAACCAGGACCCCACGCACGT...GTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp CACTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTGTGTCTGGGTCTCATCGGCCAGAGGGACAGAAGTaGCCAGGCCCAGTGACCCCT +
Preference number: 4 (lower is better)
Translates to: HWNQGSRAPGLPVSGSHRPEGQK*PGPVTP
Trigger: AGGGGTCACTGGGCCTGGCCACTTCTGTCCCTCTGG...CCGATGAGACCCAGACACAGGCAGACCTGGCGCTCTTGACCCCTGATTCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTGAACAGCAGTGGGGGTaGGCTGCGGCCGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLGRINSPSAGMPPASHVEQQWG*AAAAAP
Trigger: AGGAGCGGCGGCCGCAGCCCACCCCCACTGCTGTTC...AACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp GCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAGTCCTTCTGAACAGCAGTGGGGGTaGGCTGCGGCCGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGSRDPTAVSLGRINSPSEQQWG*AAAAAP
Trigger: AGGAGCGGCGGCCGCAGCCCACCCCCACTGCTGTTC...AGAAGGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp TGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTGAAGTAGCTGCAGACGGCTCTAGGGGCTGGGAGAGCTaGCAGCAGAGATCCCACCGC +
Preference number: 4 (lower is better)
Translates to: CPAWRGINSSSEVAADGSRGWES*QQRSHR
Trigger: GCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT...AGAGCCGTCTGCAGCTACTTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp CTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTGTGTCTGGGTCTCATCGGCATCTTTGGGCCTGTCGTaGGGGAGGCAGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LESGVKSARSACVWVSSASLGLS*GRQQVC
Trigger: GCAGACCTGCTGCCTCCCCCACGACAGGCCCAAAGA...TGCCGATGAGACCCAGACACAGGCAGACCTGGCGCTCTTGACCCCTGATTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp CCACACAGACAGGACTGGAAGCCCCTGGGCAGCAGGTCAGGTGACCCGGGGAGTCTTAGTGTTGTGACCTaGCATTGGGCCCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PHRQDWKPLGSRSGDPGSLSVVT*HWAPVS
Trigger: GCTCACAGGGGCCCAATGCCAGGTCACAACACTAAG...ACTCCCCGGGTCACCTGACCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp CCAGTCCTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAAGGCCACACAGGCGACCGGGTaGGAGACAGCCGGGACATGT +
Preference number: 4 (lower is better)
Translates to: PVLCSFSTGEHLGSCHKATQATG*ETAGTC
Trigger: ACATGTCCCGGCTGTCTCTCACCCGGTCGCCTGTGT...GGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp AGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCACGTTCTGTTGCCATaGCACCTGGGACCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RGWESWQQRSHRCIFGSHHVLLP*HLGPWC
Trigger: GCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTG...ATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp CGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCACTCACGCTGGCTGCATaGCTTGGTGCCCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RINSPSAGMPPASHVLLPLTLAA*LGAPWL
Trigger: CAGCCAGGGGGCACCAAGTCATGCAGCCAGCGTGAG...TGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp GGCCTAGTCCAGGGGTTCCTGCTTGATTCGAACAGCAGTGGGGGTGGGCTGCGGCGTTCTGTGCTTAGGTaGACTGCAGGTCTCACGCTG +
Preference number: 4 (lower is better)
Translates to: GLVQGFLLDSNSSGGGLRRSVLR*TAGLTL
Trigger: CAGCGTGAGACCTGCAGTTCACCTAAGCACAGAACG...CCGCAGCCCACCCCCACTGCTGTTCGAATCAAGCAGGAACCCCTGGACTAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp ATCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTCCGCGGTGCCGGTGCTaGCGTGTGTGTGAAGCGAGG +
Preference number: 4 (lower is better)
Translates to: IFGSHQQSFCRHASSIPRPRCRC*RVCEAR
Trigger: CCTCGCTTCACACACACGGCAGCACCGGCACCGCGG...ACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp AGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATACTCAGCCTCTGTCCTaGCTCGCCTGTTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RGWESWQQRSHRCIFGSHTQPLS*LACCLG
Trigger: ACCCAGGCAACAGGCGAGGCAGGACAGAGGCTGAGT...ATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCAGCTGGTGGGTGCCTaGGACTCCCAGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HAHGQVYTGRTPQHCFQVQLVGA*DSQVSR
Trigger: CCTGCTGACCTGGGAGTCGCAGGCACCCACCAGCTG...GACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp ACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCTGGGGCGACAGGCTGTGGAATaGGTGCACAGGGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TAKYTQAELPSTVSRSLGRQAVE*VHRGPS
Trigger: AGAGGGCCCCCTGTGCACGCATTCCACAGCCTGTCG...CCCCAGGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TCTTTGGGCCTGTCGTGGGGGAGGCAGCAGGTCTGCAAGGACTCCTCAGGGCCATCACCCTCGGTCTCATaGCCACGGCCAAGTATACAC +
Preference number: 4 (lower is better)
Translates to: SLGLSWGRQQVCKDSSGPSPSVS*PRPSIH
Trigger: GTGTATACTTGGCCGTGGGCATGAGACCGAGGGTGA...TGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCTCCCCCACGACAGGCCCAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CCACACAGACAGGACTGGAAGCCCCTGGGCAGCAGGTCAGGTGACCCGGGGAGTCATCAACAGTCCTTCTaGAGGCATGCCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: PHRQDWKPLGSRSGDPGSHQQSF*RHASSI
Trigger: GATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATG...ACTCCCCGGGTCACCTGACCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp TCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCGGGGCCTCAGAGGATaGTGCGCCAGGCTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: SLGRINSPSAGMPPASHVRGLRG*CARLRS
Trigger: GCTTCGCAGCCTGGCGCAGCATCCTCTGAGGCCCCG...AACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACGCATCTGGGCCTGAATaGCAGGCAGCTGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: LLQACLQHPTFCCHDTWDASGPE*QAAGPP
Trigger: GGGTGGACCAGCTGCCTGGCATTCAGGCCCAGATGC...GTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CCAGTCCTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAAGGCCGCATCTGGGCCTGAATaGCAGGCAGCTGGTCCACCC +
Preference number: 4 (lower is better)
Translates to: PVLCSFSTGEHLGSCHKAASGPE*QAAGPP
Trigger: GGGTGGACCAGCTGCCTGGCATTCAGGCCCAGATGC...GGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp AGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATTGCAGCACACATCCCTaGATCTGTCCCGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RGWESWQQRSHRCIFGSHCSTHP*ICPESP
Trigger: GGGGCTCTCGGGACAGATGCAGGGATGTGTGCTGCA...ATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACCCTGGTGCTCTCCTCCCAGCAGCCCTaGAGCACACATCCCTGCATC +
Preference number: 4 (lower is better)
Translates to: HASSIPRSVAMTPGTLVLSSQQP*STHPCI
Trigger: GATGCAGGGATGTGTGCTGCAGGGCTGCTGGGAGGA...GAGCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp AGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCTCCAGCAGCCCAGGTaGCAGTCCACACAGACAGGA +
Preference number: 4 (lower is better)
Translates to: RGWESWQQRSHRCIFGSHLQQPR*QSTQTG
Trigger: TCCTGTCTGTGTGGACTGGCACCTGGGCTGCTGGAG...ATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp ACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCAGCAGCCCAGGACCTTCCTCCACCACTaGTGCGGGTTATTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: TCSPEAGPNGRRLLQQPRTFLHH*CGLFLD
Trigger: ATCGAGGAATAACCCGCAGCAGTGGTGGAGGAAGGT...CCTGGGCTGCTGGAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CACTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTGTGTCTGGGTCTCATCGGGGCTGGCTGAGCCACTaGCTGCCACCTTCTCATACC +
Preference number: 4 (lower is better)
Translates to: HWNQGSRAPGLPVSGSHRGWLSH*LPPSHT
Trigger: GGTATGAGAAGGTGGCAGGCAGTGGCTCAGCCAGCC...CCGATGAGACCCAGACACAGGCAGACCTGGCGCTCTTGACCCCTGATTCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TCTTTGGGCCTGTCGTGGGGGAGGCAGCAGGTCTGCAAGGACTCCTCAGGGCCATGCCCAGAGTATCGTTaGAAGCCCCAGGCTTTACGC +
Preference number: 4 (lower is better)
Translates to: SLGLSWGRQQVCKDSSGPCPEYR*KPQALR
Trigger: GCGTAAAGCCTGGGGCTTCCAACGATACTCTGGGCA...TGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCTCCCCCACGACAGGCCCAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp CTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTGTGTCTGGGTCTCATCGGCACCAGCTCGCGCACCATaGGCTGGAGCTGATAGTAGC +
Preference number: 4 (lower is better)
Translates to: LESGVKSARSACVWVSSAPARAP*AGADSS
Trigger: GCTACTATCAGCTCCAGCCCATGGTGCGCGAGCTGG...TGCCGATGAGACCCAGACACAGGCAGACCTGGCGCTCTTGACCCCTGATTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp CAGCCTGAGCCCCCAACGGCAGCAAACGTGAAGGTCTCAGGTGGTTACAGAATCACGTGCGTGGGGTCCTaGTTCCAGCCGGCGTTGACG +
Preference number: 4 (lower is better)
Translates to: QPEPPTAANVKVSGGYRITCVGS*FQPALT
Trigger: CGTCAACGCCGGCTGGAACCAGGACCCCACGCACGT...GATTCTGTAACCACCTGAGACCTTCACGTTTGCTGCCGTTGGGGGCTCAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp CTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACTCTCTTGGCAGCTGGTaGGTGCCTGCGACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLQACLQHPTFCCHDTWDSLGSW*VPATPR
Trigger: CCTGGGAGTCGCAGGCACCCACCAGCTGCCAAGAGA...GTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCGCGTCCACAACTATGTaGGTTTGTGCCTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: HDTWDPGARWASFGPSSLASTTM*VCASVR
Trigger: CCTCACAGAGGCACAAACCCACATAGTTGTGGACGC...GAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TGTTGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCTACAGAACCACGTGCTaGGTTCCACCACCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: CCHDTWDPGARWASFGPSYRTTC*VPPPEG
Trigger: TCCCTCTGGTGGTGGAACCCAGCACGTGGTTCTGTA...GGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TCACCCTCGGTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCATCGCTGGGCCAGCTTTaGACCCTCCAGCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: SPSVSCPRPSIHRQNSPASLGQL*TLQPHP
Trigger: AGGGTGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGA...TGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGACCGAGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp GCAGCAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCATGTTGCCATGACACCTaGGACCCTGGTGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: AAGLQGLLRASPHWNQGSCCHDT*DPGARW
Trigger: CCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACA...TGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp TGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACCCTGTGTTGCCATGACACCTaGGACCCTGGTGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: CRHASSIPRSVAMTPGTLCCHDT*DPGARW
Trigger: CCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACA...CAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp CCCCAGCCCTGCAGGCATCTGGGCCTGAATGCCAGGCAGCTGGTCCACCCTGCACCACCGCTGTATCTTTaGGTCGCATCAACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PQPCRHLGLNARQLVHPAPPLYL*VASTVL
Trigger: AAGGACTGTTGATGCGACCCAAAGATACAGCGGTGG...TGCAGGGTGGACCAGCTGCCTGGCATTCAGGCCCAGATGCCTGCAGGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp CAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAAGAGCCACACAGACAGGACTaGAAGCCCCTGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QVCKDSSGPVLTGIRGQEPHRQD*KPLGSR
Trigger: CCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTGTGG...CTCTTGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp TGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCAACTGGAGCTGGGGATaGCTCCCTGAGCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: CPRPSIHRQNSPALFPGPNWSWG*LPELGT
Trigger: GGTCCCCAGCTCAGGGAGCCATCCCCAGCTCCAGTT...GGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp TCTTTGGGCCTGTCGTGGGGGAGGCAGCAGGTCTGCAAGGACTCCTCAGGGCCAGATTGTACAGTGGGATaGCGTCTGCTCTGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLGLSWGRQQVCKDSSGPDCTVG*RLLCGL
Trigger: AAGGCCGCAGAGCAGACGCCATCCCACTGTACAATC...TGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCTCCCCCACGACAGGCCCAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp GACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCCTTTACGCCTTGCCGTaGATCTCCAAGGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: DARRPARVCPAWRGINSSLYALP*ISKVSP
Trigger: GGGAGAAACCTTGGAGATTCACGGCAAGGCGTAAAG...GGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp ACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCAGCAGCCCAGGCTCAGTCTTGCTCACTaGCAAAGGTCCCTACAGAAC +
Preference number: 4 (lower is better)
Translates to: TCSPEAGPNGRRLLQQPRLSLAH*QRSLQN
Trigger: GTTCTGTAGGGACCTTTGTCAGTGAGCAAGACTGAG...CCTGGGCTGCTGGAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp CTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAAAGCACATACTCGCTaGACTGGGAGGAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: LSDARRPARVCPAWRGINKAHTR*TGRSPH
Trigger: GTGTGGACTCCTCCCAGTTCAGCGAGTATGTGCTTT...GTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp ATTCCTGAGGTAACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCCAGGGGTTCCTGCTTaGTTCGAACAGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: IPEVTCSPEAGPNGRRLLPGVPA*FEQQWG
Trigger: CCCCCACTGCTGTTCGAATCAAGCAGGAACCCCTGG...GAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTCAGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp GACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCCCTTGTCAGCCTCTCTaGCTTTTGCAGTTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: DARRPARVCPAWRGINSSPCQPL*LLQLGL
Trigger: CAGCCCTAACTGCAAAAGTCAGAGAGGCTGACAAGG...GGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp CTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACCCTTGTCAGCCTCTCTaGCTTTTGCAGTTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSDARRPARVCPAWRGINPCQPL*LLQLGL
Trigger: CAGCCCTAACTGCAAAAGTCAGAGAGGCTGACAAGG...GTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp TGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACCCTGGCCATGCTGCACGTCTaGCTGAGAACTGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: CRHASSIPRSVAMTPGTLAMLHV*LRTEHQ
Trigger: CTGGTGCTCAGTTCTCAGTCAGACGTGCAGCATGGC...CAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp AGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATGCCATGCTGCACGTCTaGCTGAGAACTGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: RGWESWQQRSHRCIFGSHAMLHV*LRTEHQ
Trigger: CTGGTGCTCAGTTCTCAGTCAGACGTGCAGCATGGC...ATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp TCTTTGGGCCTGTCGTGGGGGAGGCAGCAGGTCTGCAAGGACTCCTCAGGGCCACAACGGCAGCAAACGTaGAGGTCTCAGGTGGTTACA +
Preference number: 4 (lower is better)
Translates to: SLGLSWGRQQVCKDSSGPQRQQT*RSQVVT
Trigger: TGTAACCACCTGAGACCTTCACGTTTGCTGCCGTTG...TGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCTCCCCCACGACAGGCCCAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp TCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTGGTAACGTGCAGCCCTaGGGCTGGTCCGAACGGGAG +
Preference number: 4 (lower is better)
Translates to: SLGRINSPSAGMPPASHVGNVQP*GWSERE
Trigger: CTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACC...AACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp ACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCAGCAGCCCAGGATATTCTTAGTGTTGTaGCCTGGCATTGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TCSPEAGPNGRRLLQQPRIFLVL*PGIGPL
Trigger: CAGGGGCCCAATGCCAGGTCACAACACTAAGAATAT...CCTGGGCTGCTGGAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp GAGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCACCGAGCAGAGAGAAGTaGGCAGAATGCCACGCTCAT +
Preference number: 4 (lower is better)
Translates to: EGLGELAAEIPPLYLWVAPSREK*AECHAH
Trigger: ATGAGCGTGGCATTCTGCTCACTTCTCTCTGCTCGG...TGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430256.3
CDS-3UTR GCA 90 bp TTCTCCTCCACTCAGATGGGAGCCTCAGATGCCAAAACGCAGATGTGCCAACTAGCCGCCTATGCTCGCTaGGCGGGTCGCTCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: FSSTQMGASDAKTQMCQLAAYAR*AGRSGL
Trigger: GAGACCGGAGCGACCCGCGCAGCGAGCATAGGCGGC...TAGTTGGCACATCTGCGTTTTGGCATCTGAGGCTCCCATCTGAGTGGAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TGTTGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCCTAGGCTTCCATCCCTaGCCAGAGTATCGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: CCHDTWDPGARWASFGPSLGFHP*PEYRWK
Trigger: CTTCCAACGATACTCTGGGCAGGGATGGAAGCCTAG...GGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CCCTCACTCCATCTGAGCTGTCCAATTCTTGGACCCATCCAGGAAGAGCCGGTCCGCTCGGCCGCTCCTTaGGGTGAGGCATCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: PSLHLSCPILGPIQEEPVRSAAP*GEASRL
Trigger: AAGCCTAGATGCCTCACCGCAAGGAGCGGCCGAGCG...GACCGGCTCTTCCTGGATGGGTCCAAGAATTGGACAGCTCAGATGGAGTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp ATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCATCCTGCCTCGCCTGTTaGCTGGGTTTAGTTCGAATC +
Preference number: 4 (lower is better)
Translates to: MTPGTLVLAGPALDPPASSCLAC*LGLVRI
Trigger: GATTCGAACTAAACCCAGGCAACAGGCGAGGCAGGA...TGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CACAGACAGGACTGGAAGCCCCTGGGCAGCAGGTCAGGTGACCCGGGGAGTGCAAACTATGTGGGTTTGTaGCTCTGTGAGGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: HRQDWKPLGSRSGDPGSANYVGL*LCEGEV
Trigger: GACCTCACCCTCACAGAGGCACAAACCCACATAGTT...TGCACTCCCCGGGTCACCTGACCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCAGCTTCCCTGAGCTGTaGATTCCAGGTGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: HDTWDPGARWASFGPSSLSFPEL*IPGGLK
Trigger: CTTCAAACCACCTGGAATGCACAGCTCAGGGAAGCT...GAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp GAGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCACATCCCACGTTCTGTTaGCATGACACCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: EGLGELAAEIPPLYLWVAHPTFC*HDTWDP
Trigger: AGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATG...TGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp TCTGCACTCACTGGCAGGGGTTTGGTGGGAAACGGGGAAGCTTTGGCATGGTTCAGACCCGCCAGAGTCTaGCCCGCGTGGAGAGGGATA +
Preference number: 4 (lower is better)
Translates to: SALTGRGLVGNGEALAWFRPARV*PAWRGI
Trigger: TATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCT...GAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TGCGGGAGTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCTTGCAGCTGGTCCACCCTaGAGCCATGCTGCACGTCTG +
Preference number: 4 (lower is better)
Translates to: CGSLAAASAQDRASSLLLAAGPP*SHAARL
Trigger: CAGACGTGCAGCATGGCTGCAGGGTGGACCAGCTGC...AAGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp AATGCGGGAGTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCGGGAGGCAGCAGGTCTaGAAGGACTCCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: NAGVWLLLLHRTEPPVFCGRQQV*KDSSGP
Trigger: TGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCTCCC...GCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCGGGAGGCAGCAGGTCTaGAAGGACTCCTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: HAHGQVYTGRTPQHCFQVGRQQV*KDSSGP
Trigger: TGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCTCCC...GACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CACTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTGTGTCTGGGTCTCATCGGCGCCCACCAGTCCTCTaGAGTTTCTCCACCGGAGAA +
Preference number: 4 (lower is better)
Translates to: HWNQGSRAPGLPVSGSHRRPPVL*SFSTGE
Trigger: TTCTCCGGTGGAGAAACTGCAGAGGACTGGTGGGCG...CCGATGAGACCCAGACACAGGCAGACCTGGCGCTCTTGACCCCTGATTCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp ATTCCTGAGGTAACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCCGGAAGCAGCAGCTTaGACGTCCGCAGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: IPEVTCSPEAGPNGRRLLPEAAA*TSAGSS
Trigger: TGAGCTTCCTGCGGACGTCCAAGCTGCTGCTTCCGG...GAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTCAGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp ACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCTGGGGCCAGCTCGCGCACCATaGGCTGGAGCTGATAGTAGC +
Preference number: 4 (lower is better)
Translates to: TAKYTQAELPSTVSRSLGPARAP*AGADSS
Trigger: GCTACTATCAGCTCCAGCCCATGGTGCGCGAGCTGG...CCCCAGGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp TGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCAATGTGCCAAGCTCTTaGGTCTGCGAAGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: CHDTWDPGARWASFGPSSNVPSS*VCEELL
Trigger: CAACAGCTCTTCGCAGACCCAAGAGCTTGGCACATT...GCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACCCTGGTGCTCAGGTGGTTTGAAGCCTaGGGGTGCATCAGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: HASSIPRSVAMTPGTLVLRWFEA*GCISSW
Trigger: CCACGAGCTGATGCACCCCCAGGCTTCAAACCACCT...GAGCACCAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCACGCTGAAACCCCTCTaGAACAGCCGCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: CPRPSIHRQNSPALFPGPTLKPL*NSRSRT
Trigger: GGTCCTGGAGCGGCTGTTCCAGAGGGGTTTCAGCGT...GGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp TGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTCGCTGGGCCAGCTTTaGACCCTCCAGCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: WVASTVLLQACLQHPTFCSLGQL*TLQPHP
Trigger: AGGGTGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGA...ACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp AGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTGAAGTATGTTGCCATGACACCTaGGACCCTGGTGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: RPARVCPAWRGINSSSEVCCHDT*DPGARW
Trigger: CCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACA...TACTTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp GAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAGTCCTTGTGCATTGGACTTGGTaGGCTGGGCTGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ELAAEIPPLYLWVASTVLVHWTW*AGLAGG
Trigger: TCCCCCTGCCAGCCCAGCTCACCAAGTCCAATGCAC...AAGGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp AAGAAGCATTGGTCCTTGTCAGCCTCTCTGACTTTTGCAGTTAGGGCTGCATCCCGCCCAAGTCGGGCGTaGCGCGCACCACCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: KKHWSLSASLTFAVRAASRPSRA*RAPPGS
Trigger: ACTGCCTGGTGGTGCGCGTCACGCCCGACTTGGGCG...GGATGCAGCCCTAACTGCAAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp ATCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTAGGACGCAGCCACGCTaGAACCCCTCTGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: IFGSHQQSFCRHASSIPRRTQPR*NPSGTA
Trigger: GGCTGTTCCAGAGGGGTTTCAGCGTGGCTGCGTCCT...ACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp GAGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCAGATAAACAGCTCCTCTaGAGTAGCTGCAGACGGCTC +
Preference number: 4 (lower is better)
Translates to: EGLGELAAEIPPLYLWVADKQLL*SSCRRL
Trigger: GAGCCGTCTGCAGCTACTTCAGAGGAGCTGTTTATC...TGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp TCACCCTCGGTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCAGCCATGCTGCACGTCTaGCTGAGAACTGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: SPSVSCPRPSIHRQNSPAAMLHV*LRTEHQ
Trigger: CTGGTGCTCAGTTCTCAGTCAGACGTGCAGCATGGC...TGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGACCGAGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp TTCTCCTCCACTCAGATGGGAGCCTCAGATGCCAAAACGCAGATGTGCCAACTAGAGCGGGACGGTGGCTaGGACCGCCTGCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: FSSTQMGASDAKTQMCQLERDGG*DRLLWL
Trigger: AAGCCACAGCAGGCGGTCTCAGCCACCGTCCCGCTC...TAGTTGGCACATCTGCGTTTTGGCATCTGAGGCTCCCATCTGAGTGGAGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCCAACAAGCGCATCCGTaGGGGACCACGACCCTCTTT +
Preference number: 4 (lower is better)
Translates to: CPRPSIHRQNSPALFPGPQQAHP*GTTTLF
Trigger: AAAGAGGGTCGTGGTCCCGCACGGATGCGCTTGTTG...GGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp ATCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTCGCTCGGCCGCTCCTTaGGGTGAGGCATCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: IFGSHQQSFCRHASSIPRRSAAP*GEASRL
Trigger: AAGCCTAGATGCCTCACCGCAAGGAGCGGCCGAGCG...ACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp GCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAGTCCTTCTGGGAAGCGGATGACGTaGGTGGGGTCCTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: AGSRDPTAVSLGRINSPSGKRMT*VGSWFQ
Trigger: CTGGAACCAGGACCCCACGCACGTCATCCGCTTCCC...AGAAGGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCAGGGGGCCCTCTTCCCTaGAAAGCCCATTCCACCCTA +
Preference number: 4 (lower is better)
Translates to: RINSPSAGMPPASHVLLPGGPLP*KAHSTL
Trigger: TAGGGTGGAATGGGCTTTGCAGGGAAGAGGGCCCCC...TGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTGAAGTAGCTGCAGACGGCTCTTTTGAAGCCTGGGGGTaGATCAGCTCGTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: CPAWRGINSSSEVAADGSFEAWG*ISSWEL
Trigger: GAGCTCCCACGAGCTGATGCACCCCCAGGCTTCAAA...AGAGCCGTCTGCAGCTACTTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CCCTCACTCCATCTGAGCTGTCCAATTCTTGGACCCATCCAGGAAGAGCCGGTCAGGCCACCATCCTGCTaGCCTCAGGGCCTTGATTCC +
Preference number: 4 (lower is better)
Translates to: PSLHLSCPILGPIQEEPVRPPSC*PQGLDS
Trigger: GGAATCAAGGCCCTGAGGGCAGCAGGATGGTGGCCT...GACCGGCTCTTCCTGGATGGGTCCAAGAATTGGACAGCTCAGATGGAGTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACAGCCGCTCCAGGACCTaGCCAGGAAGAAACAGAGGT +
Preference number: 4 (lower is better)
Translates to: LLQACLQHPTFCCHDTWDSRSRT*PGRNRG
Trigger: ACCTCTGTTTCTTCCTGGGCAGGTCCTGGAGCGGCT...GTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp GCTGTATCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCAGACCCGCCAGAGTCTaGCCCGCGTGGAGAGGGATA +
Preference number: 4 (lower is better)
Translates to: AVSLGRINSPSAGMPPASRPARV*PAWRGI
Trigger: TATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCT...GGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGATACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp TCACCCTCGGTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCAATTCCTGAGGTAACGTaGAGCCCTGAGGCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: SPSVSCPRPSIHRQNSPAIPEVT*SPEAGP
Trigger: CGGACCAGCCTCAGGGCTGCACGTTACCTCAGGAAT...TGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGACCGAGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAAGAGTCTGGCTGCTGCTTCTaGACAGGACAGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QVCKDSSGPVLTGIRGQESGCCF*TGQSLQ
Trigger: CTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGA...CTCTTGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTGTGTCTGGGTCTCATCGGCATGCCCAGAGTATCGTTaGAAGCCCCAGGCTTTACGC +
Preference number: 4 (lower is better)
Translates to: LESGVKSARSACVWVSSACPEYR*KPQALR
Trigger: GCGTAAAGCCTGGGGCTTCCAACGATACTCTGGGCA...TGCCGATGAGACCCAGACACAGGCAGACCTGGCGCTCTTGACCCCTGATTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp CTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACTCTGCGAAGAGCTGTTaGAAAATAGGCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: LSDARRPARVCPAWRGINSAKSC*KIGPHS
Trigger: GGAGTGAGGGCCTATTTTCCAACAGCTCTTCGCAGA...GTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TGCGGGAGTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCTTACGCTGAAACCCCTCTaGAACAGCCGCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: CGSLAAASAQDRASSLLLTLKPL*NSRSRT
Trigger: GGTCCTGGAGCGGCTGTTCCAGAGGGGTTTCAGCGT...AAGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTACGCTGAAACCCCTCTaGAACAGCCGCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: WVASTVLLQACLQHPTFCTLKPL*NSRSRT
Trigger: GGTCCTGGAGCGGCTGTTCCAGAGGGGTTTCAGCGT...ACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp ACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCTGGGGACATACTCGCTGAACTaGGAGGAGTCCACACCGCCC +
Preference number: 4 (lower is better)
Translates to: TAKYTQAELPSTVSRSLGTYSLN*EESTPP
Trigger: GGGCGGTGTGGACTCCTCCCAGTTCAGCGAGTATGT...CCCCAGGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp TGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCAGAGTCTGCCCCGCGTaGAGAGGGATAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: CPRPSIHRQNSPALFPGPRVCPA*RGINSS
Trigger: GGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCT...GGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp GACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCCGTGAAGGTCTCAGGTaGTTACAGAATCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: DARRPARVCPAWRGINSSREGLR*LQNHSA
Trigger: GGCTGAGTGATTCTGTAACCACCTGAGACCTTCACG...GGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp ATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCACGTGAAGGTCTCAGGTaGTTACAGAATCACTCAGCC +
Preference number: 4 (lower is better)
Translates to: MTPGTLVLAGPALDPPASREGLR*LQNHSA
Trigger: GGCTGAGTGATTCTGTAACCACCTGAGACCTTCACG...TGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp TCACCCTCGGTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCAAGGGCCAGTCCTCACTaGAATCAGGGGTCAAGAGCG +
Preference number: 4 (lower is better)
Translates to: SPSVSCPRPSIHRQNSPARASPH*NQGSRA
Trigger: CGCTCTTGACCCCTGATTCCAGTGAGGACTGGCCCT...TGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGACCGAGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp AGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTGAAGTAAGGGCCAGTCCTCACTaGAATCAGGGGTCAAGAGCG +
Preference number: 4 (lower is better)
Translates to: RPARVCPAWRGINSSSEVRASPH*NQGSRA
Trigger: CGCTCTTGACCCCTGATTCCAGTGAGGACTGGCCCT...TACTTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp ACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCTGGGGCCACCGGAGAACACTTaGGGAGCTGTCACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TAKYTQAELPSTVSRSLGPPENT*GAVTRP
Trigger: TGGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGG...CCCCAGGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp AGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTGAAGTATCGAATGCGGGAGTCTaGCTGCTGCTTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: RPARVCPAWRGINSSSEVSNAGV*LLLLHR
Trigger: CCTGTGCAGAAGCAGCAGCCAGACTCCCGCATTCGA...TACTTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATCTGCTCTGCGGCCTTaGACAGGGAGCCACTGGTCT +
Preference number: 4 (lower is better)
Translates to: RINSPSAGMPPASHVLLPSALRP*TGSHWS
Trigger: AGACCAGTGGCTCCCTGTCCAAGGCCGCAGAGCAGA...TGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CGGTGGCTGAGACCGCCTGCTGTGGCTTTGCGAGTTCTCTGCACTCACTGGCAGGTTCTCTGCACTCACTaGCAGGGGTTTGGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: RWLRPPAVALRVLCTHWQVLCTH*QGFGGK
Trigger: TTTCCCACCAAACCCCTGCCAGTGAGTGCAGAGAAC...CTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCGGTCTCAGCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp CTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACGGCCCTCACTCCATCTaGGCTGTCCAATTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: LLQACLQHPTFCCHDTWDGPHSI*AVQFLD
Trigger: GTCCAAGAATTGGACAGCTCAGATGGAGTGAGGGCC...GTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp AAGAAGCATTGGTCCTTGTCAGCCTCTCTGACTTTTGCAGTTAGGGCTGCATCCTGCTCCTGCTCCTGCTaGCAGCGCTCCAGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: KKHWSLSASLTFAVRAASCSCSC*QRSSSR
Trigger: GCGCGAGCTGGAGCGCTGGCAGCAGGAGCAGGAGCA...GGATGCAGCCCTAACTGCAAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CAGCCTGAGCCCCCAACGGCAGCAAACGTGAAGGTCTCAGGTGGTTACAGAATCGTCCTTCTGCAGGCATaGCTCCAGCATCCCACGTTC +
Preference number: 4 (lower is better)
Translates to: QPEPPTAANVKVSGGYRIVLLQA*LQHPTF
Trigger: GAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGAC...GATTCTGTAACCACCTGAGACCTTCACGTTTGCTGCCGTTGGGGGCTCAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp GTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCACTCCAGCAGCCCAGGTaGCAGTCCACACAGACAGGA +
Preference number: 4 (lower is better)
Translates to: VSCPRPSIHRQNSPALFPLQQPR*QSTQTG
Trigger: TCCTGTCTGTGTGGACTGGCACCTGGGCTGCTGGAG...TGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp GAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAGTCCATGCGGGAGTCTGGCTaGTGCTTCTGCACAGGACAG +
Preference number: 4 (lower is better)
Translates to: ESWQQRSHRCIFGSHQQSMRESG*CFCTGQ
Trigger: CTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCAT...GGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp GAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAGTCCGCCCCCAAACCTCCCTaGACAACATCGAATGCGGGA +
Preference number: 4 (lower is better)
Translates to: ESWQQRSHRCIFGSHQQSAPKPP*TTSNAG
Trigger: TCCCGCATTCGATGTTGTGCAGGGAGGTTTGGGGGC...GGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp GTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGGTGCATCAGCTCGTaGGAGCTCTGGAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VSCPRPSIHRQNSPALFPGCISS*ELWRER
Trigger: TCTCTCCCTCCAGAGCTCCCACGAGCTGATGCACCC...TGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp AAATTCGATTGTACAGTGGGATGGCGTCTGCTCTGCGGCCTTGGACAGGGAGCCACATACTCGCTGAACTaGGAGGAGTCCACACCGCCC +
Preference number: 4 (lower is better)
Translates to: KFDCTVGWRLLCGLGQGATYSLN*EESTPP
Trigger: GGGCGGTGTGGACTCCTCCCAGTTCAGCGAGTATGT...GGCTCCCTGTCCAAGGCCGCAGAGCAGACGCCATCCCACTGTACAATCGAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCAGAGTCTGCCCCGCGTaGAGAGGGATAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: HAHGQVYTGRTPQHCFQVRVCPA*RGINSS
Trigger: GGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCT...GACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp ATCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTAGATGGGCCCCTTCATaGTGGGGCCCATTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: IFGSHQQSFCRHASSIPRRWAPS*WGPFLR
Trigger: CCTCAGGAATGGGCCCCACCATGAAGGGGCCCATCT...ACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp TCCTCCACTCAGATGGGAGCCTCAGATGCCAAAACGCAGATGTGCCAACTAACTCAGGATGGTGATGGCTaGGGAGCCCCGCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: SSTQMGASDAKTQMCQLTQDGDG*GAPPTS
Trigger: ACTGGTGGGCGGGGCTCCCCAGCCATCACCATCCTG...AGTTAGTTGGCACATCTGCGTTTTGGCATCTGAGGCTCCCATCTGAGTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CCACACAGACAGGACTGGAAGCCCCTGGGCAGCAGGTCAGGTGACCCGGGGAGTGCATCATTTATGGCATaGACTGGGAACGCAATGTGT +
Preference number: 4 (lower is better)
Translates to: PHRQDWKPLGSRSGDPGSASFMA*TGNAMC
Trigger: ACACATTGCGTTCCCAGTCCATGCCATAAATGATGC...ACTCCCCGGGTCACCTGACCTGCTGCCCAGGGGCTTCCAGTCCTGTCTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp GTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCACTGCAGGTCTCACGCTaGCTGCATGACTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: VSCPRPSIHRQNSPALFPLQVSR*LHDLVP
Trigger: GGGCACCAAGTCATGCAGCCAGCGTGAGACCTGCAG...TGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 72 bp GGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTaGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCT +
Preference number: 4 (lower is better)
Translates to: GRAGSRDPTAVS*GRINSPSAGMP
Trigger: AGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp CATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCTGGGTTCAGTGCCATTaGAGAGGCGGCTTATCCTGG +
Preference number: 4 (lower is better)
Translates to: HAHGQVYTGRTPQHCFQVWVQCH*RGGLSW
Trigger: CCAGGATAAGCCGCCTCTTCAATGGCACTGAACCCA...GACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp CCAGTCCTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAAGGCCGCAACTAGCAAGTTCTaGCCGACAGGCTGTGGAATG +
Preference number: 4 (lower is better)
Translates to: PVLCSFSTGEHLGSCHKAATSKF*PTGCGM
Trigger: CATTCCACAGCCTGTCGGTCAGAACTTGCTAGTTGC...GGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp TGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACCCTGAGTCCTCTCAATATTTaGGTCTCTGCAGGCGTCCAC +
Preference number: 4 (lower is better)
Translates to: CRHASSIPRSVAMTPGTLSPLNI*VSAGVH
Trigger: GTGGACGCCTGCAGAGACTCAAATATTGAGAGGACT...CAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp ATCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTGCATTCCAGGTGGTTTaGAGCCTGGGGGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: IFGSHQQSFCRHASSIPRAFQVV*SLGVHQ
Trigger: CTGATGCACCCCCAGGCTTCAAACCACCTGGAATGC...ACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp TGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTGAAGTAGCTGCAGACGGCTCTAAAGCACATACTCGCTaGACTGGGAGGAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: CPAWRGINSSSEVAADGSKAHTR*TGRSPH
Trigger: GTGTGGACTCCTCCCAGTTCAGCGAGTATGTGCTTT...AGAGCCGTCTGCAGCTACTTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp ACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCTGGGGGATAAACAGCTCCTCTaGAGTAGCTGCAGACGGCTC +
Preference number: 4 (lower is better)
Translates to: TAKYTQAELPSTVSRSLGDKQLL*SSCRRL
Trigger: GAGCCGTCTGCAGCTACTTCAGAGGAGCTGTTTATC...CCCCAGGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp TGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACCCTGCTGTGCATATTCGCATaGGAAAACTGGAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CRHASSIPRSVAMTPGTLLCIFA*ENWSWG
Trigger: TCCCCAGCTCCAGTTTTCTCATGCGAATATGCACAG...CAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp CCTATCAAGTTTGTCCAGCAAATTCGATTGTACAGTGGGATGGCGTCTGCTCTGGGCATTGGGCCCCTGTaGGCGGGACGGTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PIKFVQQIRLYSGMASALGIGPL*AGRWLR
Trigger: TCTCAGCCACCGTCCCGCTCACAGGGGCCCAATGCC...CAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACAAACTTGATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAAGGCCAGGGGGCCAGGCTTTACGCCTTaGCGTGAATCTCCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LCSFSTGEHLGSCHKARGPGFTP*RESPRF
Trigger: AAACCTTGGAGATTCACGGCAAGGCGTAAAGCCTGG...CCCCCTGGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp ACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCTGGGGCTAGGCTTCCATCCCTaGCCAGAGTATCGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: TAKYTQAELPSTVSRSLGLGFHP*PEYRWK
Trigger: CTTCCAACGATACTCTGGGCAGGGATGGAAGCCTAG...CCCCAGGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTGTGTCTGGGTCTCATCGGCAATCGATGTGCACAGGTaGATTGGACTTGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LESGVKSARSACVWVSSAIDVHR*IGLGEL
Trigger: CAGCTCACCAAGTCCAATGCACCTGTGCACATCGAT...TGCCGATGAGACCCAGACACAGGCAGACCTGGCGCTCTTGACCCCTGATTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp AGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATATCGATGTGCACAGGTaGATTGGACTTGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RGWESWQQRSHRCIFGSHIDVHR*IGLGEL
Trigger: CAGCTCACCAAGTCCAATGCACCTGTGCACATCGAT...ATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CCCTCACTCCATCTGAGCTGTCCAATTCTTGGACCCATCCAGGAAGAGCCGGTCTCACCCTCGGTCTCATaGCCACGGCCAAGTATACAC +
Preference number: 4 (lower is better)
Translates to: PSLHLSCPILGPIQEEPVSPSVS*PRPSIH
Trigger: GTGTATACTTGGCCGTGGGCATGAGACCGAGGGTGA...GACCGGCTCTTCCTGGATGGGTCCAAGAATTGGACAGCTCAGATGGAGTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CGGTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCTCACCCTCGGTCTCATaGCCACGGCCAAGTATACAC +
Preference number: 4 (lower is better)
Translates to: RSHAHGQVYTGRTPQHCFSPSVS*PRPSIH
Trigger: GTGTATACTTGGCCGTGGGCATGAGACCGAGGGTGA...GAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCACATCCCACGTTCTGTTaGCATGACACCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: RINSPSAGMPPASHVLLPHPTFC*HDTWDP
Trigger: AGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATG...TGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CAGCCTGAGCCCCCAACGGCAGCAAACGTGAAGGTCTCAGGTGGTTACAGAATCCATCCCACGTTCTGTTaGCATGACACCTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: QPEPPTAANVKVSGGYRIHPTFC*HDTWDP
Trigger: AGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATG...GATTCTGTAACCACCTGAGACCTTCACGTTTGCTGCCGTTGGGGGCTCAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp GTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCACGCCCACCAGTCCTCTaGAGTTTCTCCACCGGAGAA +
Preference number: 4 (lower is better)
Translates to: VSCPRPSIHRQNSPALFPRPPVL*SFSTGE
Trigger: TTCTCCGGTGGAGAAACTGCAGAGGACTGGTGGGCG...TGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp TGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTCTGCACAACATCGAATaGGGGAGTCTGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: WVASTVLLQACLQHPTFCLHNIE*GSLAAA
Trigger: AGCAGCAGCCAGACTCCCGCATTCGATGTTGTGCAG...ACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp CTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTGCCAAAACGCAGATGTaGCAACTAACTATAGGCTCG +
Preference number: 4 (lower is better)
Translates to: LLRASPHWNQGSRAPGLPAKTQM*QLTIGS
Trigger: CGAGCCTATAGTTAGTTGGCACATCTGCGTTTTGGC...AGGCAGACCTGGCGCTCTTGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp AGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTGAAGTAGAGCTGTCCAATTCTTaGACCCATCCAGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RPARVCPAWRGINSSSEVELSNS*THPGRA
Trigger: GGCTCTTCCTGGATGGGTCCAAGAATTGGACAGCTC...TACTTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp ATTCCTGAGGTAACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCAGCTCGTGGGAGCTCTaGAGGGAGAGAAAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: IPEVTCSPEAGPNGRRLLSSWEL*RERKRR
Trigger: TCTCCTTTTTCTCTCCCTCCAGAGCTCCCACGAGCT...GAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTCAGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp GCTGTATCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCACATACTCGCTGAACTaGGAGGAGTCCACACCGCCC +
Preference number: 4 (lower is better)
Translates to: AVSLGRINSPSAGMPPASTYSLN*EESTPP
Trigger: GGGCGGTGTGGACTCCTCCCAGTTCAGCGAGTATGT...GGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGATACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp CTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAAGGCCAGGGGGTTCCCAGTTCCCATCTaGCTAGGGACTGTGAATCAG +
Preference number: 4 (lower is better)
Translates to: LCSFSTGEHLGSCHKARGFPVPI*LGTVNQ
Trigger: CTGATTCACAGTCCCTAGCCAGATGGGAACTGGGAA...CCCCCTGGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTGTGTCTGGGTCTCATCGGCAAATTCGATTGTACAGTaGGATGGCGTCTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LESGVKSARSACVWVSSANSIVQ*DGVCSA
Trigger: CGCAGAGCAGACGCCATCCCACTGTACAATCGAATT...TGCCGATGAGACCCAGACACAGGCAGACCTGGCGCTCTTGACCCCTGATTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp GCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTCCCCATCCCGGTCAATaGAATAATGTTGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: ARRPARVCPAWRGINSSSPHPGQ*NNVASN
Trigger: GTTTGAAGCAACATTATTTCATTGACCGGGATGGGG...AGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGCGCCCAAGTCGGGCGTaGCGCGCACCACCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SIPQAPSFNYERDINYASRPSRA*RAPPGS
Trigger: ACTGCCTGGTGGTGCGCGTCACGCCCGACTTGGGCG...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS-3UTR TCA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGGGGCCTTCTCGCCGCTaGGTGCGATCCGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SIPQAPSFNYERDINYASGPSRR*VRSARP
Trigger: TGGGCGAGCGGATCGCACTCAGCGGCGAGAAGGCCC...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS-3UTR TCA 90 bp CATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCAAAGCACATACTCGCTaGACTGGGAGGAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: HAHGQVYTGRTPQHCFQVKAHTR*TGRSPH
Trigger: GTGTGGACTCCTCCCAGTTCAGCGAGTATGTGCTTT...GACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp ATTCCTGAGGTAACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCCAGGCTTTACGCCTTaGCGTGAATCTCCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: IPEVTCSPEAGPNGRRLLPGFTP*RESPRF
Trigger: AAACCTTGGAGATTCACGGCAAGGCGTAAAGCCTGG...GAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTCAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CGGTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCTAGGCTTCCATCCCTaGCCAGAGTATCGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: RSHAHGQVYTGRTPQHCFLGFHP*PEYRWK
Trigger: CTTCCAACGATACTCTGGGCAGGGATGGAAGCCTAG...GAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp AGTCTTTTGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCAGTCACAGGCCCGGCTaGGGCGCCGCTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLLLESIIYGMDWERNVFSHRPG*GAAAPA
Trigger: AGCAGGAGCAGCGGCGCCGCAGCCGGGCCTGTGACT...GAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGAGTCACAGGCCCGGCTaGGGCGCCGCTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SIPQAPSFNYERDINYASSHRPG*GAAAPA
Trigger: AGCAGGAGCAGCGGCGCCGCAGCCGGGCCTGTGACT...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS-3UTR GCA 90 bp TGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCGTAGGGTGTAACCTATaGCCTCTCTCCAGACACATG +
Preference number: 4 (lower is better)
Translates to: CPRPSIHRQNSPALFPGPVGCNL*PLSRHM
Trigger: CATGTGTCTGGAGAGAGGGCATAGGTTACACCCTAC...GGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TCTGCACTCACTGGCAGGGGTTTGGTGGGAAACGGGGAAGCTTTGGCATGGTTCCATCAACAGTCCTTCTaGAGGCATGCCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: SALTGRGLVGNGEALAWFHQQSF*RHASSI
Trigger: GATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATG...GAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp GTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCATTCCTCCACCACTGCTaGGGGTTATTCCTCGATGGG +
Preference number: 4 (lower is better)
Translates to: VSCPRPSIHRQNSPALFPFLHHC*GLFLDG
Trigger: CCCATCGAGGAATAACCCGCAGCAGTGGTGGAGGAA...TGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp GAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAGTCCAGAATTCAGAATCTGTaGTGCCCTGAGGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: ESWQQRSHRCIFGSHQQSRIQNL*CPEGTG
Trigger: GCCTGTCCCCTCAGGGCAGCACAGATTCTGAATTCT...GGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTGAAGTAGCTGCAGACGGCTCTCCACCGCTGTATCTTTaGGTCGCATCAACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: CPAWRGINSSSEVAADGSPPLYL*VASTVL
Trigger: AAGGACTGTTGATGCGACCCAAAGATACAGCGGTGG...AGAGCCGTCTGCAGCTACTTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CCA 90 bp GAGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCAGCATCATTTATGGCATaGACTGGGAACGCAATGTGT +
Preference number: 4 (lower is better)
Translates to: EGLGELAAEIPPLYLWVAASFMA*TGNAMC
Trigger: ACACATTGCGTTCCCAGTCCATGCCATAAATGATGC...TGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp GTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCACACAGGTTTCCAAACTaGCCCGGTAGTGACCCGCTT +
Preference number: 4 (lower is better)
Translates to: VSCPRPSIHRQNSPALFPHRFPN*PGSDPL
Trigger: AAGCGGGTCACTACCGGGCCAGTTTGGAAACCTGTG...TGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430256.3
CDS-3UTR CCA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGAGCTCACTCTGCCCCTaGAGGGCTCCGCGGACGCCG +
Preference number: 4 (lower is better)
Translates to: SIPQAPSFNYERDINYASSSLCP*RAPRTP
Trigger: CGGCGTCCGCGGAGCCCTCCAGGGGCAGAGTGAGCT...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590385.2
3UTR CAA 72 bp CCAGCAAGGGCACCTTCTCCTGTGACGATCTCAGTCTaGCTCACTGACAAAGGTCCCTACAGAACCACGTGC +
Preference number: 4 (lower is better)
Translates to: PARAPSPVTISV*LTDKGPYRTTC
Trigger: GCACGTGGTTCTGTAGGGACCTTTGTCAGTGAGCAAGACTGAGATCGTCACAGGAGAAGGTGCCCTTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 72 bp TGGCTTTGCGAGTTCTCTGCACTCACTGGCAGGGGTTaGGTGGGAAACGGGGAAGCTTTGGCATGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: WLCEFSALTGRG*VGNGEALAWFC
Trigger: ACAGAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGAGAACTCGCAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp ATCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTCTTTACGCCTTGCCGTaGATCTCCAAGGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: IFGSHQQSFCRHASSIPRLYALP*ISKVSP
Trigger: GGGAGAAACCTTGGAGATTCACGGCAAGGCGTAAAG...ACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp TCACCCTCGGTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACGTCTGACTGAGAACTaGGCACCAGATAAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SPSVSCPRPSIHRQNSPARLTEN*APDKEA
Trigger: TGCTTCTTTATCTGGTGCTCAGTTCTCAGTCAGACG...TGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGACCGAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp TCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCAACGGCAGCAAACGTaGAGGTCTCAGGTGGTTACA +
Preference number: 4 (lower is better)
Translates to: SLGRINSPSAGMPPASHVQRQQT*RSQVVT
Trigger: TGTAACCACCTGAGACCTTCACGTTTGCTGCCGTTG...AACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp CGGTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCTGTGCATATTCGCATaGGAAAACTGGAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RSHAHGQVYTGRTPQHCFLCIFA*ENWSWG
Trigger: TCCCCAGCTCCAGTTTTCTCATGCGAATATGCACAG...GAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp CTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAAGGCCAGGGGGAATTGGAGGCCTATGTaGATCTGTTTACATGGAGGC +
Preference number: 4 (lower is better)
Translates to: LCSFSTGEHLGSCHKARGNWRPM*ICLHGG
Trigger: GCCTCCATGTAAACAGATTCACATAGGCCTCCAATT...CCCCCTGGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TGGTCCTTGTCAGCCTCTCTGACTTTTGCAGTTAGGGCTGCATCCATTTTAAATCAGCTTCGCCGCCTATaGTCGCTGCGCGGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: WSLSASLTFAVRAASILNQLRRL*SLRGSL
Trigger: GAGCGACCCGCGCAGCGAGCATAGGCGGCGAAGCTG...ATTTAAAATGGATGCAGCCCTAACTGCAAAAGTCAGAGAGGCTGACAAGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000589786.5
CDS-3UTR GCA 90 bp TGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTCCAGGCTTTACGCCTTaGCGTGAATCTCCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: WVASTVLLQACLQHPTFCPGFTP*RESPRF
Trigger: AAACCTTGGAGATTCACGGCAAGGCGTAAAGCCTGG...ACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp AGTCTTTTGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCCCTCCGCGGTGCCGGTaGTGCCGTGTGTGTGAAGCG +
Preference number: 4 (lower is better)
Translates to: SLLLESIIYGMDWERNVFPPRCR*CRVCEA
Trigger: CGCTTCACACACACGGCAGCACCGGCACCGCGGAGG...GAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTATCGATGTGCACAGGTaGATTGGACTTGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: WVASTVLLQACLQHPTFCIDVHR*IGLGEL
Trigger: CAGCTCACCAAGTCCAATGCACCTGTGCACATCGAT...ACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGTGCTCCTGCTCCTGCTaGCAGCGCTCCAGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: SIPQAPSFNYERDINYASCSCSC*QRSSSR
Trigger: GCGCGAGCTGGAGCGCTGGCAGCAGGAGCAGGAGCA...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS-3UTR GCA 90 bp GAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAGTCCTTCATCAACAGTCCTTCTaGAGGCATGCCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: ELAAEIPPLYLWVASTVLHQQSF*RHASSI
Trigger: GATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATG...AAGGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp AAAAGAGGCTTTGGGTCCCTTCTTTATTCTGTAGGGTGTAACCTATGCCCTCTCGATGCTGCGCCAGGCTaGGAAGCTGAGGGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KRGFGSLLYSVGCNLCPLDAAPG*EAEGLG
Trigger: TCCCAGCCCCTCAGCTTCGCAGCCTGGCGCAGCATC...GAGAGGGCATAGGTTACACCCTACAGAATAAAGAAGGGACCCAAAGCCTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp GTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGCTTTGCGAGTTCTCTaGACTCACTGGCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: VSCPRPSIHRQNSPALFPALRVL*THWQGF
Trigger: AAACCCCTGCCAGTGAGTGCAGAGAACTCGCAAAGC...TGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp ATAAGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGATCTTTCCGAGACCACTaGTTAAGTCAGAAGCACAAA +
Preference number: 4 (lower is better)
Translates to: ISHLSDARRPARVCPAWRSFRDH*LSQKHK
Trigger: TTTGTGCTTCTGACTTAAGCAGTGGTCTCGGAAAGA...TCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430256.3
CDS-3UTR GCA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGGGGGAGGGGGCAGCGTaGAGCCCTCACCTGTACCGA +
Preference number: 4 (lower is better)
Translates to: SIPQAPSFNYERDINYASGEGAA*SPHLYR
Trigger: TCGGTACAGGTGAGGGCTGCACGCTGCCCCCTCCCC...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS-3UTR CCA 90 bp ATTCCTGAGGTAACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCTCCAAAGTCAGACTCTaGGTGTCAAATGAAGCACGC +
Preference number: 4 (lower is better)
Translates to: IPEVTCSPEAGPNGRRLLSKVRL*VSNEAR
Trigger: GCGTGCTTCATTTGACACCCAGAGTCTGACTTTGGA...GAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTCAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp GAGGTAACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCAGCAGGGCAAAAAGAGGCTTTaGGTCCCTTCTTTATTCTGT +
Preference number: 4 (lower is better)
Translates to: EVTCSPEAGPNGRRLLQQGKKRL*VPSLFC
Trigger: ACAGAATAAAGAAGGGACCCAAAGCCTCTTTTTGCC...CTGCTGGAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp AAGAAGCATTGGTCCTTGTCAGCCTCTCTGACTTTTGCAGTTAGGGCTGCATCCAGATGGGCCCCTTCATaGTGGGGCCCATTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KKHWSLSASLTFAVRAASRWAPS*WGPFLR
Trigger: CCTCAGGAATGGGCCCCACCATGAAGGGGCCCATCT...GGATGCAGCCCTAACTGCAAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp AAGAAGCATTGGTCCTTGTCAGCCTCTCTGACTTTTGCAGTTAGGGCTGCATCCGATGGCTCCCTGAGCTaGGGACCTAGAAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: KKHWSLSASLTFAVRAASDGSLS*GPRRRC
Trigger: GCAGCGTCTTCTAGGTCCCCAGCTCAGGGAGCCATC...GGATGCAGCCCTAACTGCAAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp CCTATCAAGTTTGTCCAGCAAATTCGATTGTACAGTGGGATGGCGTCTGCTCTGTCTTTGGGCCTGTCGTaGGGGAGGCAGCAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: PIKFVQQIRLYSGMASALSLGLS*GRQQVC
Trigger: GCAGACCTGCTGCCTCCCCCACGACAGGCCCAAAGA...CAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACAAACTTGATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp AAAAGAGGCTTTGGGTCCCTTCTTTATTCTGTAGGGTGTAACCTATGCCCTCTCTTGGTGCCCCCTGGCTaGCTGAGCCACTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KRGFGSLLYSVGCNLCPLLVPPG*LSHCLP
Trigger: TGGCAGGCAGTGGCTCAGCCAGCCAGGGGGCACCAA...GAGAGGGCATAGGTTACACCCTACAGAATAAAGAAGGGACCCAAAGCCTCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CTTCTGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACGGGGAAGCTTTGGCATaGTTCTGTCCAGTTGCTTAT +
Preference number: 4 (lower is better)
Translates to: LLQACLQHPTFCCHDTWDGEALA*FCPVAY
Trigger: ATAAGCAACTGGACAGAACCATGCCAAAGCTTCCCC...GTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CCCACCAGTCCTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAAGAAACGGGGAAGCTTTaGCATGGTTCTGTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: PTSPLQFLHRRTLGELSQETGKL*HGSVQL
Trigger: CAACTGGACAGAACCATGCCAAAGCTTCCCCGTTTC...TTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAGGACTGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp AAAAGAGGCTTTGGGTCCCTTCTTTATTCTGTAGGGTGTAACCTATGCCCTCTCGTGCATTGGACTTGGTaGGCTGGGCTGGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: KRGFGSLLYSVGCNLCPLVHWTW*AGLAGG
Trigger: TCCCCCTGCCAGCCCAGCTCACCAAGTCCAATGCAC...GAGAGGGCATAGGTTACACCCTACAGAATAAAGAAGGGACCCAAAGCCTCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGACGTGCGTGGGGTCCTaGTTCCAGCCGGCGTTGACG +
Preference number: 4 (lower is better)
Translates to: SIPQAPSFNYERDINYASTCVGS*FQPALT
Trigger: CGTCAACGCCGGCTGGAACCAGGACCCCACGCACGT...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS-3UTR CCA 90 bp TTCTCCTCCACTCAGATGGGAGCCTCAGATGCCAAAACGCAGATGTGCCAACTAGTTAGCAAACCTAGTTaGACGACCCCACCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: FSSTQMGASDAKTQMCQLVSKPS*TTPPRP
Trigger: TGGCCTGGGTGGGGTCGTCCAACTAGGTTTGCTAAC...TAGTTGGCACATCTGCGTTTTGGCATCTGAGGCTCCCATCTGAGTGGAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTGTGTCTGGGTCTCATCGGCAATTTATGGCATGGACTaGGAACGCAATGTGTTCACA +
Preference number: 4 (lower is better)
Translates to: LESGVKSARSACVWVSSAIYGMD*ERNVFT
Trigger: TGTGAACACATTGCGTTCCCAGTCCATGCCATAAAT...TGCCGATGAGACCCAGACACAGGCAGACCTGGCGCTCTTGACCCCTGATTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp ACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCTGGGGTCTCATACCATTACGTaGGGGTCTAAAGAGGACATC +
Preference number: 4 (lower is better)
Translates to: TAKYTQAELPSTVSRSLGSHTIT*GSKEDI
Trigger: GATGTCCTCTTTAGACCCCCACGTAATGGTATGAGA...CCCCAGGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp AATATTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGATGGTGATGAGCCCCAGTGCGCCCTaGCCCGCCTGTTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: NIKGAIYKSTAIVHRMVMSPSAP*PACCRG
Trigger: GCCCCTGCAACAGGCGGGCCAGGGCGCACTGGGGCT...CATCACCATCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430256.3
3UTR CAA 72 bp GGAAATGTGCCAAGCTCTTGGGTCTGCGAAGAGCTGTaGGAAAATAGGCCCTCACTCCATCTGAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GNVPSSWVCEEL*ENRPSLHLSCP
Trigger: TGGACAGCTCAGATGGAGTGAGGGCCTATTTTCCAACAGCTCTTCGCAGACCCAAGAGCTTGGCACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp AAGTGGCCAGGCCCAGTGACCCCTCAGGTTAGCAAACCTAGTTGGACGACCCCACTCCAGTCTTTTGCTTaGGAGCATCATTTATGGCAT +
Preference number: 4 (lower is better)
Translates to: KWPGPVTPQVSKPSWTTPLQSFA*EHHLWH
Trigger: ATGCCATAAATGATGCTCTCAAGCAAAAGACTGGAG...TGGGGTCGTCCAACTAGGTTTGCTAACCTGAGGGGTCACTGGGCCTGGCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGGGGAAGCGGATGACGTaGGTGGGGTCCTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SIPQAPSFNYERDINYASGKRMT*VGSWFQ
Trigger: CTGGAACCAGGACCCCACGCACGTCATCCGCTTCCC...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS-3UTR GCA 90 bp CGCCTGTTGCCTGGGTTTAGTTCGAATCCAAAGTCAGACTCTGGGTGTCAAATGCCTAACCCGGAAATGTaGCAAGCTCTTGGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: RLLPGFSSNPKSDSGCQMPNPEM*QALGSA
Trigger: CGCAGACCCAAGAGCTTGGCACATTTCCGGGTTAGG...CATTTGACACCCAGAGTCTGACTTTGGATTCGAACTAAACCCAGGCAACAGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp AGTCTTTTGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCCGAGAGCCCCAGCCCTaGAGGCATCTGGGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: SLLLESIIYGMDWERNVFREPQP*RHLGLN
Trigger: ATTCAGGCCCAGATGCCTGCAGGGCTGGGGCTCTCG...GAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCACACAAACGAGAGCCCCAGCCCTaGAGGCATCTGGGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: CLRASFMAWTGNAMCSHKREPQP*RHLGLN
Trigger: ATTCAGGCCCAGATGCCTGCAGGGCTGGGGCTCTCG...TTTGTGTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CGGTGGCTGAGACCGCCTGCTGTGGCTTTGCGAGTTCTCTGCACTCACTGGCAGATGTGTTCACACAAATaGACGACAATTGTACATCAG +
Preference number: 4 (lower is better)
Translates to: RWLRPPAVALRVLCTHWQMCSHK*TTIVHQ
Trigger: CTGATGTACAATTGTCGTGCATTTGTGTGAACACAT...CTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCGGTCTCAGCCACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCACACAAAGCCACTGGTCTGTGCTaGTGTCCCCTGAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: CLRASFMAWTGNAMCSHKATGLC*CPLRQV
Trigger: GACCTGCCTCAGGGGACAGCAGCACAGACCAGTGGC...TTTGTGTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CGCCTGTTGCCTGGGTTTAGTTCGAATCCAAAGTCAGACTCTGGGTGTCAAATGTCACTGGCAGGGGTTTaGTGGGAAACGGGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: RLLPGFSSNPKSDSGCQMSLAGV*WETGKL
Trigger: AAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGA...CATTTGACACCCAGAGTCTGACTTTGGATTCGAACTAAACCCAGGCAACAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp TGGTCCTTGTCAGCCTCTCTGACTTTTGCAGTTAGGGCTGCATCCATTTTAAATCCAGGGGTTCCTGCTTaGTTCGAACAGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: WSLSASLTFAVRAASILNPGVPA*FEQQWG
Trigger: CCCCCACTGCTGTTCGAATCAAGCAGGAACCCCTGG...ATTTAAAATGGATGCAGCCCTAACTGCAAAAGTCAGAGAGGCTGACAAGGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR TCA 90 bp AAGAAGCATTGGTCCTTGTCAGCCTCTCTGACTTTTGCAGTTAGGGCTGCATCCGATAAACAGCTCCTCTaGAGTAGCTGCAGACGGCTC +
Preference number: 4 (lower is better)
Translates to: KKHWSLSASLTFAVRAASDKQLL*SSCRRL
Trigger: GAGCCGTCTGCAGCTACTTCAGAGGAGCTGTTTATC...GGATGCAGCCCTAACTGCAAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR GCA 90 bp CGGTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAATATTTGAGTCTCTaGAGGCGTCCACAACTATGT +
Preference number: 4 (lower is better)
Translates to: RSHAHGQVYTGRTPQHCFQYLSL*RRPQLC
Trigger: ACATAGTTGTGGACGCCTGCAGAGACTCAAATATTG...GAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp AAAAGAGGCTTTGGGTCCCTTCTTTATTCTGTAGGGTGTAACCTATGCCCTCTCGTGGCTGAGACCGCCTaGTGTGGCTTTGCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: KRGFGSLLYSVGCNLCPLVAETA*CGFASS
Trigger: AGAACTCGCAAAGCCACAGCAGGCGGTCTCAGCCAC...GAGAGGGCATAGGTTACACCCTACAGAATAAAGAAGGGACCCAAAGCCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGCCGGAAGCAGCAGCTTaGACGTCCGCAGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SIPQAPSFNYERDINYASPEAAA*TSAGSS
Trigger: TGAGCTTCCTGCGGACGTCCAAGCTGCTGCTTCCGG...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS-3UTR CCA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGCCAGCTCGCGCACCATaGGCTGGAGCTGATAGTAGC +
Preference number: 4 (lower is better)
Translates to: SIPQAPSFNYERDINYASPARAP*AGADSS
Trigger: GCTACTATCAGCTCCAGCCCATGGTGCGCGAGCTGG...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS-3UTR CCA 90 bp AAAAGAGGCTTTGGGTCCCTTCTTTATTCTGTAGGGTGTAACCTATGCCCTCTCCCACCGGAGAACACTTaGGGAGCTGTCACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KRGFGSLLYSVGCNLCPLPPENT*GAVTRP
Trigger: TGGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGG...GAGAGGGCATAGGTTACACCCTACAGAATAAAGAAGGGACCCAAAGCCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp AGTCTTTTGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCTGGACAGGGAGCCACTaGTCTGTGCTGCTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLLLESIIYGMDWERNVFWTGSH*SVLLSP
Trigger: AGGGGACAGCAGCACAGACCAGTGGCTCCCTGTCCA...GAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 72 bp CTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCTaGAGAGCATCATTTATGGCATGGACTGGGAACGCA +
Preference number: 4 (lower is better)
Translates to: LLLHRTEPPVFC*RASFMAWTGNA
Trigger: TGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 72 bp GCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTaGCTTGAGAGCATCATTTATGGCATGGACTGGGAA +
Preference number: 4 (lower is better)
Translates to: AAASAQDRASSL*LESIIYGMDWE
Trigger: TTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp CCTATCAAGTTTGTCCAGCAAATTCGATTGTACAGTGGGATGGCGTCTGCTCTGCTTTACGCCTTGCCGTaGATCTCCAAGGTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PIKFVQQIRLYSGMASALLYALP*ISKVSP
Trigger: GGGAGAAACCTTGGAGATTCACGGCAAGGCGTAAAG...CAGAGCAGACGCCATCCCACTGTACAATCGAATTTGCTGGACAAACTTGATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp TCTGCACTCACTGGCAGGGGTTTGGTGGGAAACGGGGAAGCTTTGGCATGGTTCAAAATCCCAAACATTTaGGACAGGGTTCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: SALTGRGLVGNGEALAWFKIPNI*DRVQKH
Trigger: GTGCTTTTGAACCCTGTCTCAAATGTTTGGGATTTT...GAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAGTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCACACAAACAAGAGCGCCAGGTCTaGCTGTGTCTGGGTCTCATC +
Preference number: 4 (lower is better)
Translates to: CLRASFMAWTGNAMCSHKQERQV*LCLGLI
Trigger: GATGAGACCCAGACACAGGCAGACCTGGCGCTCTTG...TTTGTGTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp ACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCTGGGGATGTGTTCACACAAATaGACGACAATTGTACATCAG +
Preference number: 4 (lower is better)
Translates to: TAKYTQAELPSTVSRSLGMCSHK*TTIVHQ
Trigger: CTGATGTACAATTGTCGTGCATTTGTGTGAACACAT...CCCCAGGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp GCTGTATCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCGAGCCTCCAGTCTTTTaGTTGAGAGCATCATTTATG +
Preference number: 4 (lower is better)
Translates to: AVSLGRINSPSAGMPPASEPPVF*LRASFM
Trigger: CATAAATGATGCTCTCAAGCAAAAGACTGGAGGCTC...GGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGATACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp ATCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTATTTATGGCATGGACTaGGAACGCAATGTGTTCACA +
Preference number: 4 (lower is better)
Translates to: IFGSHQQSFCRHASSIPRIYGMD*ERNVFT
Trigger: TGTGAACACATTGCGTTCCCAGTCCATGCCATAAAT...ACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
3UTR CAA 72 bp CTCACTGGCAGGGGTTTGGTGGGAAACGGGGAAGCTTaGGCATGGTTCTGTCCAGTTGCTTATAATCAAGAA +
Preference number: 4 (lower is better)
Translates to: LTGRGLVGNGEA*AWFCPVAYNQE
Trigger: TTCTTGATTATAAGCAACTGGACAGAACCATGCCAAAGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCACACAAACGCCTGCTGTGGCTTTaGGAGTTCTCTGCACTCACT +
Preference number: 4 (lower is better)
Translates to: CLRASFMAWTGNAMCSHKRLLWL*EFSALT
Trigger: AGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCG...TTTGTGTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp CAAAGAGCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAAGGACGCAGCCACGCTaGAACCCCTCTGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: QRAEVTFIRLAFDKRLLIRTQPR*NPSGTA
Trigger: GGCTGTTCCAGAGGGGTTTCAGCGTGGCTGCGTCCT...TATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGCTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp AAGAAGCATTGGTCCTTGTCAGCCTCTCTGACTTTTGCAGTTAGGGCTGCATCCCAAAAGTGGGTGCAGTaGGAGATACAAGTTCATTCC +
Preference number: 4 (lower is better)
Translates to: KKHWSLSASLTFAVRAASQKWVQ*EIQVHS
Trigger: GGAATGAACTTGTATCTCTCACTGCACCCACTTTTG...GGATGCAGCCCTAACTGCAAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430256.3
CDS-3UTR CCA 90 bp AATATTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGATGGTGATGCCGGAAGCAGCAGCTTaGACGTCCGCAGGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: NIKGAIYKSTAIVHRMVMPEAAA*TSAGSS
Trigger: TGAGCTTCCTGCGGACGTCCAAGCTGCTGCTTCCGG...CATCACCATCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp AATATTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGATGGTGATGCCAGCTCGCGCACCATaGGCTGGAGCTGATAGTAGC +
Preference number: 4 (lower is better)
Translates to: NIKGAIYKSTAIVHRMVMPARAP*AGADSS
Trigger: GCTACTATCAGCTCCAGCCCATGGTGCGCGAGCTGG...CATCACCATCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp GAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAGTCCATTATAGCATCATTATaGGGACATAGTGTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: ESWQQRSHRCIFGSHQQSIIASL*GHSVSL
Trigger: TAGGGAAACACTATGTCCCCATAATGATGCTATAAT...GGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp GCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAATATACCTGCAAGAGGACACCTaGCTTGGCCTGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: AEVTFIRLAFDKRLLIIYLQEDT*LGLAGR
Trigger: CCTCCCTGCCAGGCCAAGCCAGGTGTCCTCTTGCAG...GTATATTATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp AATATTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGATGGTGATGAGAGTCTGCCCCGCGTaGAGAGGGATAAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: NIKGAIYKSTAIVHRMVMRVCPA*RGINSS
Trigger: GGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCT...CATCACCATCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR GCA 90 bp CAAAGAGCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATACCCTACAGAACCACGTaGTGGGTTCCACCACCAGAG +
Preference number: 4 (lower is better)
Translates to: QRAEVTFIRLAFDKRLLIPYRTT*WVPPPE
Trigger: CTCTGGTGGTGGAACCCAGCACGTGGTTCTGTAGGG...TATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp GCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAATATACCGGGAGTCTGGCTGCTaGTTCTGCACAGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: AEVTFIRLAFDKRLLIIYRESGC*FCTGQS
Trigger: GCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCG...GTATATTATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TGCACGACAATTGTACATCAGCATCTTTACAATATTAAAGGAGCCATATACAAGGTCCAGGGATTCTCTTaGCAGCTGGTGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: CTTIVHQHLYNIKGAIYKVQGFS*QLVGAC
Trigger: GCAGGCACCCACCAGCTGCCAAGAGAATCCCTGGAC...CTTGTATATGGCTCCTTTAATATTGTAAAGATGCTGATGTACAATTGTCGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 72 bp GCCAAAACGCAGATGTGCCAACTAACTATAGGCTCGTaGCTAAGCAGAGAAACCTATCAAGTTTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AKTQMCQLTIGS*LSRETYQVCPA
Trigger: TGCTGGACAAACTTGATAGGTTTCTCTGCTTAGCAACGAGCCTATAGTTAGTTGGCACATCTGCGTTTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp TGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCACACAAACCCCATCCCGGTCAATaGAATAATGTTGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: CLRASFMAWTGNAMCSHKPHPGQ*NNVASN
Trigger: GTTTGAAGCAACATTATTTCATTGACCGGGATGGGG...TTTGTGTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp GGGGACATAGTGTTTCCCTATAAATTCAGAAATTCTCTGGTTGATGTAAAATCAATCCACCAGCTTCCCTaGGCTGTGCATTCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GDIVFPYKFRNSLVDVKSIHQLP*AVHSRW
Trigger: CCACCTGGAATGCACAGCTCAGGGAAGCTGGTGGAT...TGATTTTACATCAACCAGAGAATTTCTGAATTTATAGGGAAACACTATGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp AAGAAGCATTGGTCCTTGTCAGCCTCTCTGACTTTTGCAGTTAGGGCTGCATCCTATACGGCTGGCATTTaGCAAAAGATTGCTGATAAT +
Preference number: 4 (lower is better)
Translates to: KKHWSLSASLTFAVRAASYTAGI*QKIADN
Trigger: ATTATCAGCAATCTTTTGTCAAATGCCAGCCGTATA...GGATGCAGCCCTAACTGCAAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp GCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAATATACGTCCTTCTGCAGGCATaGCTCCAGCATCCCACGTTC +
Preference number: 4 (lower is better)
Translates to: AEVTFIRLAFDKRLLIIYVLLQA*LQHPTF
Trigger: GAACGTGGGATGCTGGAGGCATGCCTGCAGAAGGAC...GTATATTATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp GGGGACATAGTGTTTCCCTATAAATTCAGAAATTCTCTGGTTGATGTAAAATCATGGGTTCAGTGCCATTaGAGAGGCGGCTTATCCTGG +
Preference number: 4 (lower is better)
Translates to: GDIVFPYKFRNSLVDVKSWVQCH*RGGLSW
Trigger: CCAGGATAAGCCGCCTCTTCAATGGCACTGAACCCA...TGATTTTACATCAACCAGAGAATTTCTGAATTTATAGGGAAACACTATGTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp TGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCACACAAAAGAGGGCAGGTAAAATaGTTCTCATGGGTTAGAACA +
Preference number: 4 (lower is better)
Translates to: CLRASFMAWTGNAMCSHKRGQVK*FSWVRT
Trigger: TGTTCTAACCCATGAGAACCATTTTACCTGCCCTCT...TTTGTGTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp GCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAATATACGTCCTCCCTGAGTCCTaGCCCAATAATGGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: AEVTFIRLAFDKRLLIIYVLPES*PNNGEF
Trigger: GAACTCTCCATTATTGGGGCAGGACTCAGGGAGGAC...GTATATTATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR GCA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGGAGGGACATAAATTATaGATCGACACATTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: SIPQAPSFNYERDINYASEGHKL*IDTLLP
Trigger: AGGCAACAATGTGTCGATGCATAATTTATGTCCCTC...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS-3UTR CCA 90 bp ATCTTTACAATATTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGACCACCGCTGTATCTTTaGGTCGCATCAACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: IFTILKEPYTSLQPLYTGPPLYL*VASTVL
Trigger: AAGGACTGTTGATGCGACCCAAAGATACAGCGGTGG...TCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAATATTGTAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CCA 90 bp ATCTTTACAATATTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGACGGGTTATTCCTCGATaGGAACTGAAGGATCCAAGG +
Preference number: 4 (lower is better)
Translates to: IFTILKEPYTSLQPLYTGRVIPR*ELKDPR
Trigger: CCTTGGATCCTTCAGTTCCCATCGAGGAATAACCCG...TCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAATATTGTAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp GGGGACATAGTGTTTCCCTATAAATTCAGAAATTCTCTGGTTGATGTAAAATCACGTCTGACTGAGAACTaGGCACCAGATAAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GDIVFPYKFRNSLVDVKSRLTEN*APDKEA
Trigger: TGCTTCTTTATCTGGTGCTCAGTTCTCAGTCAGACG...TGATTTTACATCAACCAGAGAATTTCTGAATTTATAGGGAAACACTATGTCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 72 bp CTGGGAACGCAATGTGTTCACACAAATGCACGACAATaGTACATCAGCATCTTTACAATATTAAAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LGTQCVHTNARQ*YISIFTILKEP
Trigger: TGGCTCCTTTAATATTGTAAAGATGCTGATGTACAATTGTCGTGCATTTGTGTGAACACATTGCGTTCCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR TCA 90 bp GCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAATATACTACATGGAGGCATACTaGGATCTCGTTCTGTGCTTA +
Preference number: 4 (lower is better)
Translates to: AEVTFIRLAFDKRLLIIYYMEAY*DLVLCL
Trigger: TAAGCACAGAACGAGATCTCAGTATGCCTCCATGTA...GTATATTATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CCA 90 bp CAAAGAGCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAGTGAATCTGTTTACATaGAGGCATACTGAGATCTCG +
Preference number: 4 (lower is better)
Translates to: QRAEVTFIRLAFDKRLLIVNLFT*RHTEIS
Trigger: CGAGATCTCAGTATGCCTCCATGTAAACAGATTCAC...TATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGCTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR TCA 90 bp ATCTTTACAATATTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGACCCAAAAAGAGAGTTTaGGAATGTTCGAGAATCTCT +
Preference number: 4 (lower is better)
Translates to: IFTILKEPYTSLQPLYTGPKKRV*ECSRIS
Trigger: AGAGATTCTCGAACATTCTCAAACTCTCTTTTTGGG...TCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAATATTGTAAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
3UTR CAA 72 bp TTATTTTTAGCACAATCATTTACCCAAAAAGAGAGTTaGAGAATGTTCGAGAATCTCTACCACTCGGTAACC +
Preference number: 4 (lower is better)
Translates to: LFLAQSFTQKES*RMFENLYHSVT
Trigger: GGTTACCGAGTGGTAGAGATTCTCGAACATTCTCAAACTCTCTTTTTGGGTAAATGATTGTGCTAAAAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS GCA 90 bp CAGCGCGAACGGGCGCGCGCGGCGACTCCTGGCTCGGGGCTCGGCTaGGCCGCGGGGCAGAGGATTAGAGTCGCAATTAGCTCCGCGCGC +
Preference number: 5 (lower is better)
Translates to: QRERARAATPGSGLG*AAGQRIRVAISSAR
Trigger: GCGCGCGGAGCTAATTGCGACTCTAATCCTCTGCCCCGCGGCGCAGCCGAGCCCCGAGCCAGGAGTCGCCGCGCGCGCCCGTTCGCGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587559.5
CDS GCA 90 bp CACGCAGCTGCCGGTCTCGGGCGCCGGGCGCAGCTTCGCCGCCTATaGTCGCTGCGCGGGTCGCTCCGGTCTCGTCCTGGAGTTACTTTC +
Preference number: 5 (lower is better)
Translates to: HAAAGLGRRAQLRRL*SLRGSLRSRPGVTF
Trigger: GAAAGTAACTCCAGGACGAGACCGGAGCGACCCGCGCAGCGAGCATAGGCGGCGAAGCTGCGCCCGGCGCCCGAGACCGGCAGCTGCGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590771.5
CDS GCA 90 bp CTGCCGGTCTCGGGCGCCGGGCGCAGCTTCGCCGCCTATGCTCGCTaGGCGGGTCGCTCCGGTCTCGTCCTGGAGTTACTTTCTCTCTCG +
Preference number: 5 (lower is better)
Translates to: LPVSGAGRSFAAYAR*AGRSGLVLELLSLS
Trigger: CGAGAGAGAAAGTAACTCCAGGACGAGACCGGAGCGACCCGCGCAGCGAGCATAGGCGGCGAAGCTGCGCCCGGCGCCCGAGACCGGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590771.5
CDS CCA 90 bp GGGGCCTCAGCGATAGCGGTCGGGAGGGCCCACAGGTTTCCAAACTaGCCCGGTAGTGACCCGCTTCTCCAGCTGCGGCGGGAGACCCGG +
Preference number: 5 (lower is better)
Translates to: GASAIAVGRAHRFPN*PGSDPLLQLRRETR
Trigger: CCGGGTCTCCCGCCGCAGCTGGAGAAGCGGGTCACTACCGGGCCAGTTTGGAAACCTGTGGGCCCTCCCGACCGCTATCGCTGAGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430256.3
CDS GCA 90 bp GGTCTCGGGGAAGACCTCCTCGATGAGGGCCTTCTCGCCGCTGAGTaGGATCCGCTCGCCCAAGTCGGGCGTGACGCGCACCACCAGGCA +
Preference number: 5 (lower is better)
Translates to: GLGEDLLDEGLLAAE*DPLAQVGRDAHHQA
Trigger: TGCCTGGTGGTGCGCGTCACGCCCGACTTGGGCGAGCGGATCGCACTCAGCGGCGAGAAGGCCCTCATCGAGGAGGTCTTCCCCGAGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000588881.5
ENST00000589786.5
ENST00000590385.2
ENST00000683859.1
CDS GCA 90 bp CGGTGCTGCCGTGTGTGTGAAGCGAGGACCCGCTCGGCCGCTCCTTaGGGTGAGGCATCTAGGCTTCCATCCCTGCCCAGAGTATCCCCG +
Preference number: 5 (lower is better)
Translates to: RCCRVCEARTRSAAP*GEASRLPSLPRVSP
Trigger: CGGGGATACTCTGGGCAGGGATGGAAGCCTAGATGCCTCACCGCAAGGAGCGGCCGAGCGGGTCCTCGCTTCACACACACGGCAGCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588637.5
ENST00000588881.5
ENST00000590906.5
CDS-3UTR CAA 90 bp TGTTGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCCTCGCTGGGCCAGCTTaGGACCCTCCAGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: CCHDTWDPGARWASFGPSLAGPA*DPPASP
Trigger: GGGTGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAG...GGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp ACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCAGCAGCCCAGGTCCGGAAGCAGCAGCTaGGACGTCCGCAGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: TCSPEAGPNGRRLLQQPRSGSSS*DVRRKL
Trigger: GAGCTTCCTGCGGACGTCCAAGCTGCTGCTTCCGGA...CCTGGGCTGCTGGAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CAA 90 bp TGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCCGGCGTTGACGGAGTaGCACATGACGTCTCCGGTC +
Preference number: 5 (lower is better)
Translates to: CHDTWDPGARWASFGPSSPALTE*HMTSPV
Trigger: GACCGGAGACGTCATGTGCAACTCCGTCAACGCCGG...GCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp CATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCCCGGCGTTGACGGAGTaGCACATGACGTCTCCGGTC +
Preference number: 5 (lower is better)
Translates to: HDTWDPGARWASFGPSSLPALTE*HMTSPV
Trigger: GACCGGAGACGTCATGTGCAACTCCGTCAACGCCGG...GAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp GAGGTAACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCAGCAGCTCGCTGGGCCAGCTTaGGACCCTCCAGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: EVTCSPEAGPNGRRLLQQLAGPA*DPPASP
Trigger: GGGTGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAG...CTGCTGGAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS GCA 90 bp CGGTGCTGCCGTGTGTGTGAAGCGAGGACCCGCTCGGCCGCTCCTTaGGGTGAGGCATCTAGGCTTCCATCCCTGCCCAGAGTATCGTTG +
Preference number: 5 (lower is better)
Translates to: RCCRVCEARTRSAAP*GEASRLPSLPRVSL
Trigger: CAACGATACTCTGGGCAGGGATGGAAGCCTAGATGCCTCACCGCAAGGAGCGGCCGAGCGGGTCCTCGCTTCACACACACGGCAGCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000587559.5
ENST00000587658.5
ENST00000589786.5
ENST00000590771.5
ENST00000592210.1
ENST00000683859.1
CDS-3UTR CAA 90 bp ACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCAGCAGCCCAGGTGGTTCCAGCCGGCGTaGACGGAGTTGCACATGACG +
Preference number: 5 (lower is better)
Translates to: TCSPEAGPNGRRLLQQPRWFQPA*TELHMT
Trigger: CGTCATGTGCAACTCCGTCAACGCCGGCTGGAACCA...CCTGGGCTGCTGGAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS GCA 90 bp CGCCTTGCCGTGAATCTCCAAGGTTTCTCCCAACAAGCGCATCCGTaGGGGACCACGACCCTCTTTCCGAGACCACTGCTCGGAGCCGGC +
Preference number: 5 (lower is better)
Translates to: RLAVNLQGFSQQAHP*GTTTLFPRPLLGAG
Trigger: GCCGGCTCCGAGCAGTGGTCTCGGAAAGAGGGTCGTGGTCCCGCACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCACGGCAAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000588881.5
ENST00000683859.1
CDS GCA 90 bp CGCCTTGCCGTGAATCTCCAAGGTTTCTCCCAACAAGCGCATCCGTaGGGGACCACGACCCTCTTTCCGAGACCACTGCCAGCGCGAACG +
Preference number: 5 (lower is better)
Translates to: RLAVNLQGFSQQAHP*GTTTLFPRPLPART
Trigger: CGTTCGCGCTGGCAGTGGTCTCGGAAAGAGGGTCGTGGTCCCGCACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCACGGCAAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587559.5
ENST00000588637.5
CDS GCA 90 bp CGCCTTGCCGTGAATCTCCAAGGTTTCTCCCAACAAGCGCATCCGTaGGGGACCACGACCCTCTTTCCGAGACCACTCGGAGCCGGCAGA +
Preference number: 5 (lower is better)
Translates to: RLAVNLQGFSQQAHP*GTTTLFPRPLGAGR
Trigger: TCTGCCGGCTCCGAGTGGTCTCGGAAAGAGGGTCGTGGTCCCGCACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCACGGCAAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589786.5
CDS GCA 90 bp GACTTGGACTCCCCAACCCTAGCTCCCTCAGGCTGTGTCAGCTTGTaGACCCTGGAGACCCTGGTGGGTGGAGTGACAGTGGGGAGAGAC +
Preference number: 5 (lower is better)
Translates to: DLDSPTLAPSGCVSL*TLETLVGGVTVGRD
Trigger: GTCTCTCCCCACTGTCACTCCACCCACCAGGGTCTCCAGGGTGCACAAGCTGACACAGCCTGAGGGAGCTAGGGTTGGGGAGTCCAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592210.1
CDS-3UTR CAA 90 bp GAGGTAACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCAGCAGCTGCCCAGAGTATCGTaGGAAGCCCCAGGCTTTACG +
Preference number: 5 (lower is better)
Translates to: EVTCSPEAGPNGRRLLQQLPRVS*EAPGFT
Trigger: CGTAAAGCCTGGGGCTTCCAACGATACTCTGGGCAG...CTGCTGGAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CAA 90 bp GCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTCTGCCCAGAGTATCGTaGGAAGCCCCAGGCTTTACG +
Preference number: 5 (lower is better)
Translates to: ARRPARVCPAWRGINSSSLPRVS*EAPGFT
Trigger: CGTAAAGCCTGGGGCTTCCAACGATACTCTGGGCAG...AGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp TCTTTGGGCCTGTCGTGGGGGAGGCAGCAGGTCTGCAAGGACTCCTCAGGGCCAATGTGCACAGGTGCATaGGACTTGGTGAGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SLGLSWGRQQVCKDSSGPMCTGA*DLVSWA
Trigger: AGCCCAGCTCACCAAGTCCAATGCACCTGTGCACAT...TGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCTCCCCCACGACAGGCCCAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CAA 90 bp AGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATTGGTTCCAGCCGGCGTaGACGGAGTTGCACATGACG +
Preference number: 5 (lower is better)
Translates to: RGWESWQQRSHRCIFGSHWFQPA*TELHMT
Trigger: CGTCATGTGCAACTCCGTCAACGCCGGCTGGAACCA...ATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp TGTTGCCATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCTGCATTCCAGGTGGTTaGAAGCCTGGGGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: CCHDTWDPGARWASFGPSCIPGG*KPGGAS
Trigger: TGATGCACCCCCAGGCTTCAAACCACCTGGAATGCA...GGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCATGGCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp ATAAGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGATCCAGGGGTTCCTGCTaGATTCGAACAGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: ISHLSDARRPARVCPAWRSRGSC*IRTAVG
Trigger: CCCCACTGCTGTTCGAATCAAGCAGGAACCCCTGGA...TCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp ATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCACCCACCGCTGTATCTTaGGGTCGCATCAACAGTCCT +
Preference number: 5 (lower is better)
Translates to: MTPGTLVLAGPALDPPASPTAVS*GRINSP
Trigger: AGGACTGTTGATGCGACCCAAAGATACAGCGGTGGG...TGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp AATGCGGGAGTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCGTCTGCTCTGCGGCCTaGGACAGGGAGCCACTGGTC +
Preference number: 5 (lower is better)
Translates to: NAGVWLLLLHRTEPPVFCVCSAA*DREPLV
Trigger: GACCAGTGGCTCCCTGTCCAAGGCCGCAGAGCAGAC...GCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp TGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTGAAGTAGCTGCAGACGGCTCTCTCACTGGCAGGGGTTaGGTGGGAAACGGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: CPAWRGINSSSEVAADGSLTGRG*VGNGEA
Trigger: AGCTTCCCCGTTTCCCACCAAACCCCTGCCAGTGAG...AGAGCCGTCTGCAGCTACTTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS TCA 90 bp CCTGCCCAGAGTATCGTTGGAAGCCCCAGGCTTTACGCCTTGCCGTaGATCTCCAAGGTTTCTCCCAACAAGCGCATCCGTGCGGGACCA +
Preference number: 5 (lower is better)
Translates to: PAQSIVGSPRLYALP*ISKVSPNKRIRAGP
Trigger: TGGTCCCGCACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCACGGCAAGGCGTAAAGCCTGGGGCTTCCAACGATACTCTGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000587559.5
ENST00000587658.5
ENST00000589786.5
ENST00000590771.5
ENST00000683859.1
CDS TCA 90 bp TGTGCCGTAGTCACCGTTGGAAGCCCCAGGCTTTACGCCTTGCCGTaGATCTCCAAGGTTTCTCCCAACAAGCGCATCCGTGCGGGACCA +
Preference number: 5 (lower is better)
Translates to: CAVVTVGSPRLYALP*ISKVSPNKRIRAGP
Trigger: TGGTCCCGCACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCACGGCAAGGCGTAAAGCCTGGGGCTTCCAACGGTGACTACGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588637.5
ENST00000588881.5
ENST00000590906.5
CDS GCA 90 bp CCATCCCTGCCCAGAGTATCGTTGGAAGCCCCAGGCTTTACGCCTTaGCGTGAATCTCCAAGGTTTCTCCCAACAAGCGCATCCGTGCGG +
Preference number: 5 (lower is better)
Translates to: PSLPRVSLEAPGFTP*RESPRFLPTSASVR
Trigger: CCGCACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCACGGCAAGGCGTAAAGCCTGGGGCTTCCAACGATACTCTGGGCAGGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000587559.5
ENST00000587658.5
ENST00000589786.5
ENST00000590771.5
ENST00000683859.1
CDS-3UTR CAA 90 bp CCAGTCCTCTGCAGTTTCTCCACCGGAGAACACTTGGGGAGCTGTCACAAGGCCCTGCCCAGAGTATCGTaGGAAGCCCCAGGCTTTACG +
Preference number: 5 (lower is better)
Translates to: PVLCSFSTGEHLGSCHKALPRVS*EAPGFT
Trigger: CGTAAAGCCTGGGGCTTCCAACGATACTCTGGGCAG...GGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGAGAAACTGCAGAGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CAA 90 bp CGGTGGCTGAGACCGCCTGCTGTGGCTTTGCGAGTTCTCTGCACTCACTGGCAGGTGACGATCTCAGTCTaGCTCACTGACAAAGGTCCC +
Preference number: 5 (lower is better)
Translates to: RWLRPPAVALRVLCTHWQVTISV*LTDKGP
Trigger: GGGACCTTTGTCAGTGAGCAAGACTGAGATCGTCAC...CTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCGGTCTCAGCCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp TGCGGGAGTCTGGCTGCTGCTTCTGCACAGGACAGAGCCTCCAGTCTTTTGCTTTCCACCGGAGAACACTaGGGGAGCTGTCACAAGGCC +
Preference number: 5 (lower is better)
Translates to: CGSLAAASAQDRASSLLLSTGEH*GSCHKA
Trigger: GGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGA...AAGCAAAAGACTGGAGGCTCTGTCCTGTGCAGAAGCAGCAGCCAGACTCCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp ATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCAGTCCAGCAAATTCGATaGTACAGTGGGATGGCGTCT +
Preference number: 5 (lower is better)
Translates to: MTPGTLVLAGPALDPPASVQQIR*YSGMAS
Trigger: AGACGCCATCCCACTGTACAATCGAATTTGCTGGAC...TGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS CCA 90 bp TGGCCAGGTGGCCAGGAGGAAGCACAGAGCAAGCAGATCAGCCAATaGACCCTTTCTACTGCTCCTCCCCAGAGGCACTCAGTAACTCTC +
Preference number: 5 (lower is better)
Translates to: WPGGQEEAQSKQISQ*TLSTAPPQRHSVTL
Trigger: GAGAGTTACTGAGTGCCTCTGGGGAGGAGCAGTAGAAAGGGTCCATTGGCTGATCTGCTTGCTCTGTGCTTCCTCCTGGCCACCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588637.5
ENST00000588881.5
ENST00000590906.5
CDS-3UTR CAA 90 bp TCACCCTCGGTCTCATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCAATGTGCACAGGTGCATaGGACTTGGTGAGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SPSVSCPRPSIHRQNSPAMCTGA*DLVSWA
Trigger: AGCCCAGCTCACCAAGTCCAATGCACCTGTGCACAT...TGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATGAGACCGAGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp GCAGCAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAATGGGTTCAGTGCCATaGAAGAGGCGGCTTATCCTG +
Preference number: 5 (lower is better)
Translates to: AAGLQGLLRASPHWNQGSMGSVP*KRRLIL
Trigger: CAGGATAAGCCGCCTCTTCAATGGCACTGAACCCAT...TGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CAA 90 bp AGGGGCTGGGAGAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATGTCTGCGAAGAGCTGTaGGAAAATAGGCCCTCACTC +
Preference number: 5 (lower is better)
Translates to: RGWESWQQRSHRCIFGSHVCEEL*ENRPSL
Trigger: GAGTGAGGGCCTATTTTCCAACAGCTCTTCGCAGAC...ATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTCTCCCAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp CTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCAAGAGCGCCAGGTCTGCCTAAATGTGCCAAGCTCTaGGGTCTGCGAAGAGCTGTT +
Preference number: 5 (lower is better)
Translates to: LLRASPHWNQGSRAPGLPKCAKL*GLRRAV
Trigger: AACAGCTCTTCGCAGACCCAAGAGCTTGGCACATTT...AGGCAGACCTGGCGCTCTTGACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp GAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAGTCCTTCCGCCTGCTGTGGCTTaGCGAGTTCTCTGCACTCAC +
Preference number: 5 (lower is better)
Translates to: ELAAEIPPLYLWVASTVLPPAVA*RVLCTH
Trigger: GTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCGG...AAGGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS GCA 90 bp CGCCTTGCCGTGAATCTCCAAGGTTTCTCCCAACAAGCGCATCCGTaGGGGACCACGACCCTCTTTCCGAGACCACTGCTTAAGTCAGAA +
Preference number: 5 (lower is better)
Translates to: RLAVNLQGFSQQAHP*GTTTLFPRPLLKSE
Trigger: TTCTGACTTAAGCAGTGGTCTCGGAAAGAGGGTCGTGGTCCCGCACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCACGGCAAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430256.3
CDS-3UTR CAA 90 bp TGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTGAAGTAGCTGCAGACGGCTCTATGGGTTCAGTGCCATaGAAGAGGCGGCTTATCCTG +
Preference number: 5 (lower is better)
Translates to: CPAWRGINSSSEVAADGSMGSVP*KRRLIL
Trigger: CAGGATAAGCCGCCTCTTCAATGGCACTGAACCCAT...AGAGCCGTCTGCAGCTACTTCAGAGGAGCTGTTTATCCCTCTCCACGCGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp ATGACACCTGGGACCCTGGTGCTCGCTGGGCCAGCTTTGGACCCTCCAGCCTCAAAGAAGCATTGGTCCTaGTCAGCCTCTCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: MTPGTLVLAGPALDPPASKKHWS*SASLTF
Trigger: AAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTT...TGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAGCACCAGGGTCCCAGGTGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp GCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTCCAGATAAAGAAGCATaGGTCCTTGTCAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: ARRPARVCPAWRGINSSSPDKEA*VLVSLS
Trigger: AGAGAGGCTGACAAGGACCAATGCTTCTTTATCTGG...AGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS GCA 90 bp GGAGGAAGCACAGAGCAAGCAGATCAGCCAATGGACCCTTTCTACTaGTCCTCCCCAGAGGCACTCAGTAACTCTCCTCTGTGCCGTAGT +
Preference number: 5 (lower is better)
Translates to: GGSTEQADQPMDPFY*SSPEALSNSPLCRS
Trigger: ACTACGGCACAGAGGAGAGTTACTGAGTGCCTCTGGGGAGGAGCAGTAGAAAGGGTCCATTGGCTGATCTGCTTGCTCTGTGCTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588637.5
ENST00000588881.5
ENST00000590906.5
CDS GCA 90 bp CCACCCCCTAGGCAGCAGATTACAGATGCTGCCCTGACCCACACATaGCTGATGTTTCAAGGGGCTTACTCTTACCTGGAGTCAGGGTAC +
Preference number: 5 (lower is better)
Translates to: PPPRQQITDAALTHT*LMFQGAYSYLESGY
Trigger: GTACCCTGACTCCAGGTAAGAGTAAGCCCCTTGAAACATCAGGCATGTGTGGGTCAGGGCAGCATCTGTAATCTGCTGCCTAGGGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592210.1
CDS-3UTR CAA 90 bp AAGAAGCATTGGTCCTTGTCAGCCTCTCTGACTTTTGCAGTTAGGGCTGCATCCTCCGGAAGCAGCAGCTaGGACGTCCGCAGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: KKHWSLSASLTFAVRAASSGSSS*DVRRKL
Trigger: GAGCTTCCTGCGGACGTCCAAGCTGCTGCTTCCGGA...GGATGCAGCCCTAACTGCAAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp AAAAGAGGCTTTGGGTCCCTTCTTTATTCTGTAGGGTGTAACCTATGCCCTCTCCTCGCTGGGCCAGCTTaGGACCCTCCAGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: KRGFGSLLYSVGCNLCPLLAGPA*DPPASP
Trigger: GGGTGAGGCTGGAGGGTCCAAAGCTGGCCCAGCGAG...GAGAGGGCATAGGTTACACCCTACAGAATAAAGAAGGGACCCAAAGCCTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp GAGCTGGCAGCAGAGATCCCACCGCTGTATCTTTGGGTCGCATCAACAGTCCTTCCCACCGCTGTATCTTaGGGTCGCATCAACAGTCCT +
Preference number: 5 (lower is better)
Translates to: ELAAEIPPLYLWVASTVLPTAVS*GRINSP
Trigger: AGGACTGTTGATGCGACCCAAAGATACAGCGGTGGG...AAGGACTGTTGATGCGACCCAAAGATACAGCGGTGGGATCTCTGCTGCCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp AGGCAGCAGGTCTGCAAGGACTCCTCAGGGCCAGTCCTCACTGGAATCAGGGGTCCAGATAAAGAAGCATaGGTCCTTGTCAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: RQQVCKDSSGPVLTGIRGPDKEA*VLVSLS
Trigger: AGAGAGGCTGACAAGGACCAATGCTTCTTTATCTGG...ACCCCTGATTCCAGTGAGGACTGGCCCTGAGGAGTCCTTGCAGACCTGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CAA 90 bp TCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTTATGGGTTCAGTGCCATaGAAGAGGCGGCTTATCCTG +
Preference number: 5 (lower is better)
Translates to: SLGRINSPSAGMPPASHVMGSVP*KRRLIL
Trigger: CAGGATAAGCCGCCTCTTCAATGGCACTGAACCCAT...AACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp CTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACGTCAATGAAATAATGTaGCTTCAAACTGTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LSDARRPARVCPAWRGINVNEIM*LQTVQD
Trigger: GTCCTGGACAGTTTGAAGCAACATTATTTCATTGAC...GTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp ATTCCTGAGGTAACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCAAGTCCTCTCAATATTaGAGTCTCTGCAGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: IPEVTCSPEAGPNGRRLLKSSQY*SLCRRP
Trigger: TGGACGCCTGCAGAGACTCAAATATTGAGAGGACTT...GAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTCAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp ATAAGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAATGCAAAAGGTCTCATaGAAATTGGAGGCCTATGTG +
Preference number: 5 (lower is better)
Translates to: ISHLSDARRPARVCPAWRMQKVS*KLEAYV
Trigger: CACATAGGCCTCCAATTTCAATGAGACCTTTTGCAT...TCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp GCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGGGATAAACAGCTCCTCTCTAACTATAGGCTCGTaGCTAAGCAGAGAAACCTAT +
Preference number: 5 (lower is better)
Translates to: ARRPARVCPAWRGINSSSLTIGS*LSRETY
Trigger: ATAGGTTTCTCTGCTTAGCAACGAGCCTATAGTTAG...AGAGGAGCTGTTTATCCCTCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp GTGCTGGGTTCCACCACCAGAGGGACAGAAGTGGCCAGGCCCAGTGACCCCTCAACCCAAAAAGAGAGTTaGAGAATGTTCGAGAATCTC +
Preference number: 5 (lower is better)
Translates to: VLGSTTRGTEVARPSDPSTQKES*RMFENL
Trigger: GAGATTCTCGAACATTCTCAAACTCTCTTTTTGGGT...TGAGGGGTCACTGGGCCTGGCCACTTCTGTCCCTCTGGTGGTGGAACCCAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp ATAAGCCATCTCTCGGACGCTAGGAGACCCGCCAGAGTCTGCCCCGCGTGGAGAGTCAATGAAATAATGTaGCTTCAAACTGTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: ISHLSDARRPARVCPAWRVNEIM*LQTVQD
Trigger: GTCCTGGACAGTTTGAAGCAACATTATTTCATTGAC...TCTCCACGCGGGGCAGACTCTGGCGGGTCTCCTAGCGTCCGAGAGATGGCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp ATTCCTGAGGTAACGTGCAGCCCTGAGGCTGGTCCGAACGGGAGGAGACTTCTCCCTCCAGTCTTTTGCTaGAGAGCATCATTTATGGCA +
Preference number: 5 (lower is better)
Translates to: IPEVTCSPEAGPNGRRLLPPVFC*RASFMA
Trigger: TGCCATAAATGATGCTCTCAAGCAAAAGACTGGAGG...GAGAAGTCTCCTCCCGTTCGGACCAGCCTCAGGGCTGCACGTTACCTCAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp TGCAGGCATGCCTCCAGCATCCCACGTTCTGTTGCCATGACACCTGGGACCCTGAAGGTCTCATTGAAATaGGAGGCCTATGTGAATCTG +
Preference number: 5 (lower is better)
Translates to: CRHASSIPRSVAMTPGTLKVSLK*EAYVNL
Trigger: CAGATTCACATAGGCCTCCAATTTCAATGAGACCTT...CAGGGTCCCAGGTGTCATGGCAACAGAACGTGGGATGCTGGAGGCATGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGTCCGGAAGCAGCAGCTaGGACGTCCGCAGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: SIPQAPSFNYERDINYASSGSSS*DVRRKL
Trigger: GAGCTTCCTGCGGACGTCCAAGCTGCTGCTTCCGGA...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS-3UTR CAA 90 bp AGTCTTTTGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCCCGGCGTTGACGGAGTaGCACATGACGTCTCCGGTC +
Preference number: 5 (lower is better)
Translates to: SLLLESIIYGMDWERNVFPALTE*HMTSPV
Trigger: GACCGGAGACGTCATGTGCAACTCCGTCAACGCCGG...GAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCAAAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGCCGGCGTTGACGGAGTaGCACATGACGTCTCCGGTC +
Preference number: 5 (lower is better)
Translates to: SIPQAPSFNYERDINYASPALTE*HMTSPV
Trigger: GACCGGAGACGTCATGTGCAACTCCGTCAACGCCGG...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS-3UTR CAA 90 bp AAGTGGCCAGGCCCAGTGACCCCTCAGGTTAGCAAACCTAGTTGGACGACCCCAATGAAGCACGCTTTGTaGAAAATACTCTGGGCCATT +
Preference number: 5 (lower is better)
Translates to: KWPGPVTPQVSKPSWTTPMKHAL*KILWAI
Trigger: AATGGCCCAGAGTATTTTCAACAAAGCGTGCTTCAT...TGGGGTCGTCCAACTAGGTTTGCTAACCTGAGGGGTCACTGGGCCTGGCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp CATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCAAGAAGCATTGGTCCTaGTCAGCCTCTCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: HAHGQVYTGRTPQHCFQVKKHWS*SASLTF
Trigger: AAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTT...GACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp ATCTTTGGGTCGCATCAACAGTCCTTCTGCAGGCATGCCTCCAGCATCCCACGTCCAGATAAAGAAGCATaGGTCCTTGTCAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: IFGSHQQSFCRHASSIPRPDKEA*VLVSLS
Trigger: AGAGAGGCTGACAAGGACCAATGCTTCTTTATCTGG...ACGTGGGATGCTGGAGGCATGCCTGCAGAAGGACTGTTGATGCGACCCAAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp CGGTGGCTGAGACCGCCTGCTGTGGCTTTGCGAGTTCTCTGCACTCACTGGCAGACAAATGCACGACAATaGTACATCAGCATCTTTACA +
Preference number: 5 (lower is better)
Translates to: RWLRPPAVALRVLCTHWQTNARQ*YISIFT
Trigger: TGTAAAGATGCTGATGTACAATTGTCGTGCATTTGT...CTGCCAGTGAGTGCAGAGAACTCGCAAAGCCACAGCAGGCGGTCTCAGCCACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS TCA 90 bp GCAGGAAGCTCAGGACGTAGCGGAAAATCTCCCCATCCCGGTCAATaGAATAATGTTGCTTCAAACTGTCCAGGACGATGGGTTCAGTGC +
Preference number: 5 (lower is better)
Translates to: AGSSGRSGKSPHPGQ*NNVASNCPGRWVQC
Trigger: GCACTGAACCCATCGTCCTGGACAGTTTGAAGCAACATTATTTCATTGACCGGGATGGGGAGATTTTCCGCTACGTCCTGAGCTTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000587559.5
ENST00000588881.5
ENST00000589786.5
ENST00000683859.1
CDS-3UTR CAA 90 bp TGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCACACAAATGGTTCCAGCCGGCGTaGACGGAGTTGCACATGACG +
Preference number: 5 (lower is better)
Translates to: CLRASFMAWTGNAMCSHKWFQPA*TELHMT
Trigger: CGTCATGTGCAACTCCGTCAACGCCGGCTGGAACCA...TTTGTGTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CAA 90 bp TCCATCCCCCAGGCGCCATCATTTAATTATGAGAGGGACATAAATTATGCATCGTGGTTCCAGCCGGCGTaGACGGAGTTGCACATGACG +
Preference number: 5 (lower is better)
Translates to: SIPQAPSFNYERDINYASWFQPA*TELHMT
Trigger: CGTCATGTGCAACTCCGTCAACGCCGGCTGGAACCA...CGATGCATAATTTATGTCCCTCTCATAATTAAATGATGGCGCCTGGGGGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS-3UTR CAA 90 bp CATGCCCACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCGTCAATGAAATAATGTaGCTTCAAACTGTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: HAHGQVYTGRTPQHCFQVVNEIM*LQTVQD
Trigger: GTCCTGGACAGTTTGAAGCAACATTATTTCATTGAC...GACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGTGGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp ACGGCCAAGTATACACAGGCAGAACTCCCCAGCACTGTTTCCAGGTCCCTGGGGACAAATGCACGACAATaGTACATCAGCATCTTTACA +
Preference number: 5 (lower is better)
Translates to: TAKYTQAELPSTVSRSLGTNARQ*YISIFT
Trigger: TGTAAAGATGCTGATGTACAATTGTCGTGCATTTGT...CCCCAGGGACCTGGAAACAGTGCTGGGGAGTTCTGCCTGTGTATACTTGGCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS TCA 90 bp TTTCCGAGACCACTGCTTAAGTCAGAAGCACAAAAGTGGGTGCAGTaGGAGATACAAGTTCATTCCACCAGCACCAGCATCAAACCCAGC +
Preference number: 5 (lower is better)
Translates to: FPRPLLKSEAQKWVQ*EIQVHSTSTSIKPS
Trigger: GCTGGGTTTGATGCTGGTGCTGGTGGAATGAACTTGTATCTCTCACTGCACCCACTTTTGTGCTTCTGACTTAAGCAGTGGTCTCGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430256.3
CDS TCA 90 bp TTTGGGCCTGTGTCTGGGTCTCATCGGCAGGCTAGTGTAACAACGTaGATTAAAACTGTGCATATTCGCATGAGAAAACTGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: FGPVSGSHRQASVTT*IKTVHIRMRKLELG
Trigger: CCCCAGCTCCAGTTTTCTCATGCGAATATGCACAGTTTTAATTCACGTTGTTACACTAGCCTGCCGATGAGACCCAGACACAGGCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592363.1
CDS-3UTR CAA 90 bp TGGTCCTTGTCAGCCTCTCTGACTTTTGCAGTTAGGGCTGCATCCATTTTAAATCCCACCGCTGTATCTTaGGGTCGCATCAACAGTCCT +
Preference number: 5 (lower is better)
Translates to: WSLSASLTFAVRAASILNPTAVS*GRINSP
Trigger: AGGACTGTTGATGCGACCCAAAGATACAGCGGTGGG...ATTTAAAATGGATGCAGCCCTAACTGCAAAAGTCAGAGAGGCTGACAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000589786.5
CDS-3UTR CAA 90 bp AATATTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGATGGTGATGTCCAGGGGTTCCTGCTaGATTCGAACAGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: NIKGAIYKSTAIVHRMVMSRGSC*IRTAVG
Trigger: CCCCACTGCTGTTCGAATCAAGCAGGAACCCCTGGA...CATCACCATCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CAA 90 bp ATCTTTACAATATTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGATGTTGTGACCTGGCATaGGGCCCCTGTGAGCGGGAC +
Preference number: 5 (lower is better)
Translates to: IFTILKEPYTSLQPLYTGCCDLA*GPCERD
Trigger: GTCCCGCTCACAGGGGCCCAATGCCAGGTCACAACA...TCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAATATTGTAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp ATCTTTACAATATTAAAGGAGCCATATACAAGTCTACAGCCATTGTACACAGGATCCACCGGAGAACACTaGGGGAGCTGTCACAAGGCC +
Preference number: 5 (lower is better)
Translates to: IFTILKEPYTSLQPLYTGSTGEH*GSCHKA
Trigger: GGCCTTGTGACAGCTCCCCAAGTGTTCTCCGGTGGA...TCCTGTGTACAATGGCTGTAGACTTGTATATGGCTCCTTTAATATTGTAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CAA 90 bp GGGGACATAGTGTTTCCCTATAAATTCAGAAATTCTCTGGTTGATGTAAAATCATCCAGGGGTTCCTGCTaGATTCGAACAGCAGTGGGG +
Preference number: 5 (lower is better)
Translates to: GDIVFPYKFRNSLVDVKSSRGSC*IRTAVG
Trigger: CCCCACTGCTGTTCGAATCAAGCAGGAACCCCTGGA...TGATTTTACATCAACCAGAGAATTTCTGAATTTATAGGGAAACACTATGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp TGCTTGAGAGCATCATTTATGGCATGGACTGGGAACGCAATGTGTTCACACAAAAAGAAGCATTGGTCCTaGTCAGCCTCTCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: CLRASFMAWTGNAMCSHKKKHWS*SASLTF
Trigger: AAAAGTCAGAGAGGCTGACAAGGACCAATGCTTCTT...TTTGTGTGAACACATTGCGTTCCCAGTCCATGCCATAAATGATGCTCTCAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284006.10
ENST00000430256.3
CDS-3UTR CAA 90 bp TGCACGACAATTGTACATCAGCATCTTTACAATATTAAAGGAGCCATATACAAGGGAAACGGGGAAGCTTaGGCATGGTTCTGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: CTTIVHQHLYNIKGAIYKGNGEA*AWFCPV
Trigger: AACTGGACAGAACCATGCCAAAGCTTCCCCGTTTCC...CTTGTATATGGCTCCTTTAATATTGTAAAGATGCTGATGTACAATTGTCGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp GCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAATATACCAAATGAAGCACGCTTaGTTGAAAATACTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: AEVTFIRLAFDKRLLIIYQMKHA*LKILWA
Trigger: GGCCCAGAGTATTTTCAACAAAGCGTGCTTCATTTG...GTATATTATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS-3UTR CAA 90 bp CAAAGAGCAGAAGTAACATTTATACGGCTGGCATTTGACAAAAGATTGCTGATAAGAAACCTATCAAGTTaGTCCAGCAAATTCGATTGT +
Preference number: 5 (lower is better)
Translates to: QRAEVTFIRLAFDKRLLIRNLSS*SSKFDC
Trigger: ACAATCGAATTTGCTGGACAAACTTGATAGGTTTCT...TATCAGCAATCTTTTGTCAAATGCCAGCCGTATAAATGTTACTTCTGCTCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS GCA 72 bp GCCGGTCTCGGGCGCCGGGCGCAGCTTCGCCGCCTATaGTCGCTGCGCGGGTCGCTCCGGTCTCGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: AGLGRRAQLRRL*SLRGSLRSRPG
Trigger: TCCAGGACGAGACCGGAGCGACCCGCGCAGCGAGCATAGGCGGCGAAGCTGCGCCCGGCGCCCGAGACCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000589786.5
ENST00000590771.5
CDS GCA 72 bp ACCACCAGGCAGTCACAGGCCCGGCTGCGGCGCCGCTaGTCCTGCTCCTGCTGCCAGCGCTCCAGCTCGCGC +
Preference number: 6 (lower is better)
Translates to: TTRQSQARLRRR*SCSCCQRSSSR
Trigger: GCGCGAGCTGGAGCGCTGGCAGCAGGAGCAGGAGCAGCGGCGCCGCAGCCGGGCCTGTGACTGCCTGGTGGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000588881.5
ENST00000589786.5
ENST00000590385.2
ENST00000683859.1
CDS GCA 72 bp CGGGCGCGCGCGGCGACTCCTGGCTCGGGGCTCGGCTaGGCCGCGGGGCAGAGGATTAGAGTCGCAATTAGC +
Preference number: 6 (lower is better)
Translates to: RARAATPGSGLG*AAGQRIRVAIS
Trigger: GCTAATTGCGACTCTAATCCTCTGCCCCGCGGCGCAGCCGAGCCCCGAGCCAGGAGTCGCCGCGCGCGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587559.5
CDS GCA 72 bp ACCGTTTCAGGGATCGCGCCTCCCTCCAGCTCACTCTaGCCCTGGAGGGCTCCGCGGACGCCGGGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: TVSGIAPPSSSL*PWRAPRTPGVR
Trigger: CCGCACCCCCGGCGTCCGCGGAGCCCTCCAGGGGCAGAGTGAGCTGGAGGGAGGCGCGATCCCTGAAACGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590385.2
CDS GCA 72 bp GCCGGGACATGTTTCCTCCCTCCGCGGTGCCGGTGCTaGCGTGTGTGTGAAGCGAGGACCCGCTCGGCCGCT +
Preference number: 6 (lower is better)
Translates to: AGTCFLPPRCRC*RVCEARTRSAA
Trigger: AGCGGCCGAGCGGGTCCTCGCTTCACACACACGGCAGCACCGGCACCGCGGAGGGAGGAAACATGTCCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000587559.5
ENST00000587658.5
ENST00000588637.5
ENST00000588881.5
ENST00000589786.5
ENST00000590771.5
ENST00000590906.5
ENST00000592210.1
ENST00000683859.1
CDS GCA 72 bp TCGGGCGCCGGGCGCAGCTTCGCCGCCTATGCTCGCTaGGCGGGTCGCTCCGGTCTCGTCCTGGAGTTACTT +
Preference number: 6 (lower is better)
Translates to: SGAGRSFAAYAR*AGRSGLVLELL
Trigger: AAGTAACTCCAGGACGAGACCGGAGCGACCCGCGCAGCGAGCATAGGCGGCGAAGCTGCGCCCGGCGCCCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590771.5
CDS TCA 72 bp CTGCCCGCTGCCGGCAGGCTCAGGCTGGGCTGGCTCTaGATAAGCCCTAGTCCCCTGCAGGTGGGTCAGGAG +
Preference number: 6 (lower is better)
Translates to: LPAAGRLRLGWL*ISPSPLQVGQE
Trigger: CTCCTGACCCACCTGCAGGGGACTAGGGCTTATTCAGAGCCAGCCCAGCCTGAGCCTGCCGGCAGCGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592210.1
CDS CAA 72 bp GCAGGGGCCGGGCCTAAGTCTCCCTCCAGAGGAACCTaGAAGGTACGTGAGACTCCCCTGCCCGCTGCCGGC +
Preference number: 6 (lower is better)
Translates to: AGAGPKSPSRGT*KVRETPLPAAG
Trigger: GCCGGCAGCGGGCAGGGGAGTCTCACGTACCTTCAAGGTTCCTCTGGAGGGAGACTTAGGCCCGGCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592210.1
CDS TCA 72 bp CAGGGGCCGGGCCTAAGTCTCCCTCCAGAGGAACCTTaGAGGTACGTGAGACTCCCCTGCCCGCTGCCGGCA +
Preference number: 6 (lower is better)
Translates to: QGPGLSLPPEEP*RYVRLPCPLPA
Trigger: TGCCGGCAGCGGGCAGGGGAGTCTCACGTACCTTCAAGGTTCCTCTGGAGGGAGACTTAGGCCCGGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592210.1
CDS TCA 72 bp AGGAGTCCACACCGCCCCCACAGGACGCAGCCACGCTaGAACCCCTCTGGAACAGCCGCTCCAGGACCTGTA +
Preference number: 6 (lower is better)
Translates to: RSPHRPHRTQPR*NPSGTAAPGPV
Trigger: TACAGGTCCTGGAGCGGCTGTTCCAGAGGGGTTTCAGCGTGGCTGCGTCCTGTGGGGGCGGTGTGGACTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430256.3
ENST00000588881.5
ENST00000589786.5
ENST00000683859.1
CDS CCA 72 bp GATGTGCACAGGTGCATTGGACTTGGTGAGCTGGGCTaGCAGGGGGATGCCCTGGGCAGCCAGGGGAGACAC +
Preference number: 6 (lower is better)
Translates to: DVHRCIGLGELG*QGDALGSQGRH
Trigger: GTGTCTCCCCTGGCTGCCCAGGGCATCCCCCTGCCAGCCCAGCTCACCAAGTCCAATGCACCTGTGCACATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000587559.5
ENST00000587658.5
ENST00000588637.5
ENST00000588881.5
ENST00000589786.5
ENST00000590771.5
ENST00000590906.5
ENST00000592210.1
ENST00000683859.1
CDS CAA 72 bp TGCGTGGGGTCCTGGTTCCAGCCGGCGTTGACGGAGTaGCACATGACGTCTCCGGTCTCGGGGAAGACCTCC +
Preference number: 6 (lower is better)
Translates to: CVGSWFQPALTE*HMTSPVSGKTS
Trigger: GGAGGTCTTCCCCGAGACCGGAGACGTCATGTGCAACTCCGTCAACGCCGGCTGGAACCAGGACCCCACGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000588881.5
ENST00000589786.5
ENST00000590385.2
ENST00000683859.1
CDS CAA 90 bp GCAGACTTGGACTCCCCAACCCTAGCTCCCTCAGGCTGTGTCAGCTaGTGCACCCTGGAGACCCTGGTGGGTGGAGTGACAGTGGGGAGA +
Preference number: 6 (lower is better)
Translates to: ADLDSPTLAPSGCVS*CTLETLVGGVTVGR
Trigger: TCTCCCCACTGTCACTCCACCCACCAGGGTCTCCAGGGTGCACAAGCTGACACAGCCTGAGGGAGCTAGGGTTGGGGAGTCCAAGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592210.1
CDS TCA 72 bp TCCCATTGCGCTCGCAGTTGTTCGGCTCTCTGGGGGTaGTTAAACTGGCTGAGCTGCGGCAGCTTGAGACGA +
Preference number: 6 (lower is better)
Translates to: SHCARSCSALWG*LNWLSCGSLRR
Trigger: TCGTCTCAAGCTGCCGCAGCTCAGCCAGTTTAATCACCCCCAGAGAGCCGAACAACTGCGAGCGCAATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590771.5
CDS GCA 72 bp GTGAATCTCCAAGGTTTCTCCCAACAAGCGCATCCGTaGGGGACCACGACCCTCTTTCCGAGACCACTGCTC +
Preference number: 6 (lower is better)
Translates to: VNLQGFSQQAHP*GTTTLFPRPLL
Trigger: GAGCAGTGGTCTCGGAAAGAGGGTCGTGGTCCCGCACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284006.10
ENST00000588881.5
ENST00000683859.1
CDS GCA 72 bp GTGAATCTCCAAGGTTTCTCCCAACAAGCGCATCCGTaGGGGACCACGACCCTCTTTCCGAGACCACTGCCA +
Preference number: 6 (lower is better)
Translates to: VNLQGFSQQAHP*GTTTLFPRPLP
Trigger: TGGCAGTGGTCTCGGAAAGAGGGTCGTGGTCCCGCACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587559.5
ENST00000588637.5
CDS GCA 72 bp GTGAATCTCCAAGGTTTCTCCCAACAAGCGCATCCGTaGGGGACCACGACCCTCTTTCCGAGACCACTCGGA +
Preference number: 6 (lower is better)
Translates to: VNLQGFSQQAHP*GTTTLFPRPLG
Trigger: TCCGAGTGGTCTCGGAAAGAGGGTCGTGGTCCCGCACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589786.5
CDS CAA 90 bp TCAGGGTCACAAGCCTCTGTGCATAGCAGCTTTCAACAGGCAGACTaGGACTCCCCAACCCTAGCTCCCTCAGGCTGTGTCAGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: SGSQASVHSSFQQAD*DSPTLAPSGCVSLC
Trigger: GCACAAGCTGACACAGCCTGAGGGAGCTAGGGTTGGGGAGTCCAAGTCTGCCTGTTGAAAGCTGCTATGCACAGAGGCTTGTGACCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592210.1
CDS TCA 72 bp GTCACCGTTGGAAGCCCCAGGCTTTACGCCTTGCCGTaGATCTCCAAGGTTTCTCCCAACAAGCGCATCCGT +
Preference number: 6 (lower is better)
Translates to: VTVGSPRLYALP*ISKVSPNKRIR
Trigger: ACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCACGGCAAGGCGTAAAGCCTGGGGCTTCCAACGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588637.5
ENST00000588881.5
ENST00000590906.5
CDS GCA 72 bp GTGAATCTCCAAGGTTTCTCCCAACAAGCGCATCCGTaGGGGACCACGACCCTCTTTCCGAGACCACTGCTT +
Preference number: 6 (lower is better)
Translates to: VNLQGFSQQAHP*GTTTLFPRPLL
Trigger: AAGCAGTGGTCTCGGAAAGAGGGTCGTGGTCCCGCACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430256.3
CDS CAA 72 bp CAAGCCTCTGTGCATAGCAGCTTTCAACAGGCAGACTaGGACTCCCCAACCCTAGCTCCCTCAGGCTGTGTC +
Preference number: 6 (lower is better)
Translates to: QASVHSSFQQAD*DSPTLAPSGCV
Trigger: GACACAGCCTGAGGGAGCTAGGGTTGGGGAGTCCAAGTCTGCCTGTTGAAAGCTGCTATGCACAGAGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592210.1
CDS GCA 72 bp CCCAGAGTATCGTTGGAAGCCCCAGGCTTTACGCCTTaGCGTGAATCTCCAAGGTTTCTCCCAACAAGCGCA +
Preference number: 6 (lower is better)
Translates to: PRVSLEAPGFTP*RESPRFLPTSA
Trigger: TGCGCTTGTTGGGAGAAACCTTGGAGATTCACGGCAAGGCGTAAAGCCTGGGGCTTCCAACGATACTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000587559.5
ENST00000587658.5
ENST00000589786.5
ENST00000590771.5
ENST00000592210.1
ENST00000683859.1
CDS GCA 72 bp CTACCAATGCCGCCAAGTCAGGGTCACAAGCCTCTGTaGATAGCAGCTTTCAACAGGCAGACTTGGACTCCC +
Preference number: 6 (lower is better)
Translates to: LPMPPSQGHKPL*IAAFNRQTWTP
Trigger: GGGAGTCCAAGTCTGCCTGTTGAAAGCTGCTATGCACAGAGGCTTGTGACCCTGACTTGGCGGCATTGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592210.1
CDS TCA 72 bp AGTATCGTTGGAAGCCCCAGGCTTTACGCCTTGCCGTaGATCTCCAAGGTTTCTCCCAACAAGCGCATCCGT +
Preference number: 6 (lower is better)
Translates to: SIVGSPRLYALP*ISKVSPNKRIR
Trigger: ACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCACGGCAAGGCGTAAAGCCTGGGGCTTCCAACGATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000587559.5
ENST00000587658.5
ENST00000589786.5
ENST00000590771.5
ENST00000592210.1
ENST00000683859.1
CDS TCA 72 bp GCTTCAAACTGTCCAGGACGATGGGTTCAGTGCCATTaGAGAGGCGGCTTATCCTGGAGTCAGGGTACTTGG +
Preference number: 6 (lower is better)
Translates to: ASNCPGRWVQCH*RGGLSWSQGTW
Trigger: CCAAGTACCCTGACTCCAGGATAAGCCGCCTCTTCAATGGCACTGAACCCATCGTCCTGGACAGTTTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000587559.5
ENST00000587658.5
ENST00000588881.5
ENST00000589786.5
ENST00000683859.1
CDS GCA 72 bp ACAGAGCAAGCAGATCAGCCAATGGACCCTTTCTACTaGTCCTCCCCAGAGGCACTCAGTAACTCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: TEQADQPMDPFY*SSPEALSNSPL
Trigger: CAGAGGAGAGTTACTGAGTGCCTCTGGGGAGGAGCAGTAGAAAGGGTCCATTGGCTGATCTGCTTGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588637.5
ENST00000588881.5
ENST00000590906.5
CDS GCA 72 bp GTGAATCTCCAAGGTTTCTCCCAACAAGCGCATCCGTaGGGGACCACGACCCTCTTTCCGAGACCAATTTCT +
Preference number: 6 (lower is better)
Translates to: VNLQGFSQQAHP*GTTTLFPRPIS
Trigger: AGAAATTGGTCTCGGAAAGAGGGTCGTGGTCCCGCACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587658.5
CDS GCA 72 bp GTGAATCTCCAAGGTTTCTCCCAACAAGCGCATCCGTaGGGGACCACGACCCTCTTTCCGAGACCAAAAATG +
Preference number: 6 (lower is better)
Translates to: VNLQGFSQQAHP*GTTTLFPRPKM
Trigger: CATTTTTGGTCTCGGAAAGAGGGTCGTGGTCCCGCACGGATGCGCTTGTTGGGAGAAACCTTGGAGATTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590771.5
ENST00000590906.5
CDS GCA 72 bp AGGCAGCAGATTACAGATGCTGCCCTGACCCACACATaGCTGATGTTTCAAGGGGCTTACTCTTACCTGGAG +
Preference number: 6 (lower is better)
Translates to: RQQITDAALTHT*LMFQGAYSYLE
Trigger: CTCCAGGTAAGAGTAAGCCCCTTGAAACATCAGGCATGTGTGGGTCAGGGCAGCATCTGTAATCTGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592210.1
CDS TCA 72 bp CGGCAGCTTGAGACGATTTCACTAAATCGCTTCTTCTaGAGTCGCTTCTTTGCTAAGCTCGGAGCCGGCAGA +
Preference number: 6 (lower is better)
Translates to: RQLETISLNRFF*SRFFAKLGAGR
Trigger: TCTGCCGGCTCCGAGCTTAGCAAAGAAGCGACTTCAGAAGAAGCGATTTAGTGAAATCGTCTCAAGCTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590771.5
CDS TCA 72 bp TCAGGACGTAGCGGAAAATCTCCCCATCCCGGTCAATaGAATAATGTTGCTTCAAACTGTCCAGGACGATGG +
Preference number: 6 (lower is better)
Translates to: SGRSGKSPHPGQ*NNVASNCPGRW
Trigger: CCATCGTCCTGGACAGTTTGAAGCAACATTATTTCATTGACCGGGATGGGGAGATTTTCCGCTACGTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284006.10
ENST00000430256.3
ENST00000587559.5
ENST00000588881.5
ENST00000589786.5
ENST00000683859.1
CDS TCA 72 bp CCACTGCTTAAGTCAGAAGCACAAAAGTGGGTGCAGTaGGAGATACAAGTTCATTCCACCAGCACCAGCATC +
Preference number: 6 (lower is better)
Translates to: PLLKSEAQKWVQ*EIQVHSTSTSI
Trigger: GATGCTGGTGCTGGTGGAATGAACTTGTATCTCTCACTGCACCCACTTTTGTGCTTCTGACTTAAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430256.3
CDS CAA 90 bp TCGAATCCAAAGTCAGACTCTGGGTGTCAAATGAAGCACGCTTTGTaGAAAATACTCTGGGCCATTTTTATAGAACATCCTGTACCGAGT +
Preference number: 6 (lower is better)
Translates to: SNPKSDSGCQMKHAL*KILWAIFIEHPVPS
Trigger: ACTCGGTACAGGATGTTCTATAAAAATGGCCCAGAGTATTTTCAACAAAGCGTGCTTCATTTGACACCCAGAGTCTGACTTTGGATTCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10
CDS CAA 90 bp AGTTCGAATCCAAAGTCAGACTCTGGGTGTCAAATGAAGCACGCTTaGTTGAAAATACTCTGGGCCATTTTTATAGAACATCCTGTACCG +
Preference number: 6 (lower is better)
Translates to: SSNPKSDSGCQMKHA*LKILWAIFIEHPVP
Trigger: CGGTACAGGATGTTCTATAAAAATGGCCCAGAGTATTTTCAACAAAGCGTGCTTCATTTGACACCCAGAGTCTGACTTTGGATTCGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284006.10