RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124134

Ensembl transcript IDs: ENST00000306117.5, ENST00000537075.3

Found 549 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGCTGGAGCTGGCCAGAAGGGAGAGGACTCTCACACATGGGCCTaGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGT +
Preference number: 1 (lower is better)
Translates to: GAGAGQKGEDSHTWA*MGTLGRAGQCRAGR
Trigger: ACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCATGTGTGAGAGTCCTCTCCCTTCTGGCCAGCTCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR GCA 90 bp GGGACAGAGATAGCCACAGTCAGACAACAACAGCACAGTGCTGGGTaGTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTC +
Preference number: 1 (lower is better)
Translates to: GTEIATVRQQQHSAG*CSHSMWKGLLDPLL
Trigger: GAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACCCAGCACTGTGCTGTTGTTGTCTGACTGTGGCTATCTCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR GCA 90 bp CCCCTAACCTGGGTTCAGCTGGGCCTAGATGTAAGGAGCAGAGTGTaGAGAAGGGCTGGTATGTGTGTGGTGAATTCAAGGGAGGCCCTT +
Preference number: 1 (lower is better)
Translates to: PLTWVQLGLDVRSRV*RRAGMCVVNSREAL
Trigger: AAGGGCCTCCCTTGAATTCACCACACACATACCAGCCCTTCTGCACACTCTGCTCCTTACATCTAGGCCCAGCTGAACCCAGGTTAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR TCA 90 bp TCTCCTTGGCTTTCATTGCCCTCTGGGTCACAGATTCTGACCATTTaGCAGAGGGGCTGGAATCTGGACTTGGGGGCAGGGATTGGACCA +
Preference number: 1 (lower is better)
Translates to: SPWLSLPSGSQILTI*QRGWNLDLGAGIGP
Trigger: TGGTCCAATCCCTGCCCCCAAGTCCAGATTCCAGCCCCTCTGTCAAATGGTCAGAATCTGTGACCCAGAGGGCAATGAAAGCCAAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR TCA 90 bp CTGTATTTCCTGAGGCCTCGTCAGTCAGCTCTTCCTTTGGTCGGGTaGATTTCACAGATACCCTTCTGTAGTGGGCCAGATGGTGGCCCC +
Preference number: 1 (lower is better)
Translates to: LYFLRPRQSALPLVG*ISQIPFCSGPDGGP
Trigger: GGGGCCACCATCTGGCCCACTACAGAAGGGTATCTGTGAAATTCACCCGACCAAAGGAAGAGCTGACTGACGAGGCCTCAGGAAATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR CCA 90 bp GGTTCAGCTGGGCCTAGATGTAAGGAGCAGAGTGTGCAGAAGGGCTaGTATGTGTGTGGTGAATTCAAGGGAGGCCCTTTGCTGCTTAGC +
Preference number: 1 (lower is better)
Translates to: GSAGPRCKEQSVQKG*YVCGEFKGGPLLLS
Trigger: GCTAAGCAGCAAAGGGCCTCCCTTGAATTCACCACACACATACCAGCCCTTCTGCACACTCTGCTCCTTACATCTAGGCCCAGCTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CCA 90 bp TCAAGGGAGGCCCTTTGCTGCTTAGCTCCATCCTCTGTTCCAATCTaGAGACCCAGAATCCATGCGTATGTAGGGGGCCCACTATGTACT +
Preference number: 1 (lower is better)
Translates to: SREALCCLAPSSVPI*RPRIHAYVGGPLCT
Trigger: AGTACATAGTGGGCCCCCTACATACGCATGGATTCTGGGTCTCCAGATTGGAACAGAGGATGGAGCTAAGCAGCAAAGGGCCTCCCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR TCA 90 bp TCCCAGGACTCATCCTCCTTCCCTCCAGGACTCATCTTTGATTGCTaGCTCCTGTTGGATGCTCCTAGAAAGGAACCACAGCTGAGATCC +
Preference number: 1 (lower is better)
Translates to: SQDSSSFPPGLIFDC*LLLDAPRKEPQLRS
Trigger: GGATCTCAGCTGTGGTTCCTTTCTAGGAGCATCCAACAGGAGTCAGCAATCAAAGATGAGTCCTGGAGGGAAGGAGGATGAGTCCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR TCA 90 bp TGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTCTCAGCAAGTaGAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGC +
Preference number: 1 (lower is better)
Translates to: CGKGYWIPSSDFLSK*REDSAGGYERYAPS
Trigger: GCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGCTGAGAAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR GCA 90 bp TGCAGAAGGGCTGGTATGTGTGTGGTGAATTCAAGGGAGGCCCTTTaGTGCTTAGCTCCATCCTCTGTTCCAATCTGGAGACCCAGAATC +
Preference number: 1 (lower is better)
Translates to: CRRAGMCVVNSREAL*CLAPSSVPIWRPRI
Trigger: GATTCTGGGTCTCCAGATTGGAACAGAGGATGGAGCTAAGCAGCAAAGGGCCTCCCTTGAATTCACCACACACATACCAGCCCTTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CCA 90 bp GGCAGAGACTTGAGTGATGCAGCCACAGCCAAGGAAAGCCAAGAATaGTGGCAGCCACCACAAACTAGAAGAGAAAAGGAGAGGGTTTCC +
Preference number: 1 (lower is better)
Translates to: GRDLSDAATAKESQE*WQPPQTRREKERVS
Trigger: GGAAACCCTCTCCTTTTCTCTTCTAGTTTGTGGTGGCTGCCACCATTCTTGGCTTTCCTTGGCTGTGGCTGCATCACTCAAGTCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR TCA 90 bp GACTTGACATACACAGACACTGAAGTGAGATCAGAGGCAGAGACTTaGGTGATGCAGCCACAGCCAAGGAAAGCCAAGAATGGTGGCAGC +
Preference number: 1 (lower is better)
Translates to: DLTYTDTEVRSEAET*VMQPQPRKAKNGGS
Trigger: GCTGCCACCATTCTTGGCTTTCCTTGGCTGTGGCTGCATCACTCAAGTCTCTGCCTCTGATCTCACTTCAGTGTCTGTGTATGTCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR GCA 90 bp AGAAGGGCTGGTATGTGTGTGGTGAATTCAAGGGAGGCCCTTTGCTaGTTAGCTCCATCCTCTGTTCCAATCTGGAGACCCAGAATCCAT +
Preference number: 1 (lower is better)
Translates to: RRAGMCVVNSREALC*LAPSSVPIWRPRIH
Trigger: ATGGATTCTGGGTCTCCAGATTGGAACAGAGGATGGAGCTAAGCAGCAAAGGGCCTCCCTTGAATTCACCACACACATACCAGCCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CCA 90 bp GACGTCTGTGTGATGGGCAGAAAGGAACTGCCAAGGTCAGACTGTTaGGGGAGGGTCTTAGAAGCCAGTATTCATATATGTCAGCCCTCT +
Preference number: 1 (lower is better)
Translates to: DVCVMGRKELPRSDC*GRVLEASIHICQPS
Trigger: AGAGGGCTGACATATATGAATACTGGCTTCTAAGACCCTCCCCCAACAGTCTGACCTTGGCAGTTCCTTTCTGCCCATCACACAGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR TCA 90 bp TTGATTGCTGACTCCTGTTGGATGCTCCTAGAAAGGAACCACAGCTaGGATCCAGAGCTCCTATATCCAAATCTCCTGTCTGGACCCTTC +
Preference number: 1 (lower is better)
Translates to: LIADSCWMLLERNHS*DPELLYPNLLSGPF
Trigger: GAAGGGTCCAGACAGGAGATTTGGATATAGGAGCTCTGGATCTCAGCTGTGGTTCCTTTCTAGGAGCATCCAACAGGAGTCAGCAATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CCA 90 bp AGCCCAGATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTaGGAGAGGCATCGCTCATCTCTTAGCCTTGGTTTCCTCATCTGT +
Preference number: 1 (lower is better)
Translates to: SPDSKPDSATSNCDI*ERHRSSLSLGFLIC
Trigger: ACAGATGAGGAAACCAAGGCTAAGAGATGAGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAATCTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CCA 90 bp CTGTTCTGGCTGGCACAACCACAAAGTTTGTGCCAAATCCAGGACTaGAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATTGCCCA +
Preference number: 1 (lower is better)
Translates to: LFWLAQPQSLCQIQD*SLRMWIPSHSTYCP
Trigger: TGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTCCAGTCCTGGATTTGGCACAAACTTTGTGGTTGTGCCAGCCAGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR GCA 90 bp TTCTCCAACACAAGGCCAAACATGACCTGGTTCATGTACAGGAGGTaGTCAGGAATCATTAGTATCCTTTCAACTTCCTCCCTCTGGCTC +
Preference number: 1 (lower is better)
Translates to: FSNTRPNMTWFMYRR*SGIISILSTSSLWL
Trigger: GAGCCAGAGGGAGGAAGTTGAAAGGATACTAATGATTCCTGAGCACCTCCTGTACATGAACCAGGTCATGTTTGGCCTTGTGTTGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR GCA 90 bp GTAAGTACCTTTCCTCCAACTGCCGCAAATACTAATACGGTACCTTaGCCTCCATCCCTCCCAAGAGAGAGGCATATGACTCAAGTGAAA +
Preference number: 1 (lower is better)
Translates to: VSTFPPTAANTNTVP*PPSLPRERHMTQVK
Trigger: TTTCACTTGAGTCATATGCCTCTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGCGGCAGTTGGAGGAAAGGTACTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR CCA 90 bp CTTAGCAAATCTTGCATACCAGCTAAAGAGGCAAGTACAATGCTATaGTACTTCCTCCCAGGACTCATCCTCCTTCCCTCCAGGACTCAT +
Preference number: 1 (lower is better)
Translates to: LSKSCIPAKEASTML*YFLPGLILLPSRTH
Trigger: ATGAGTCCTGGAGGGAAGGAGGATGAGTCCTGGGAGGAAGTACCATAGCATTGTACTTGCCTCTTTAGCTGGTATGCAAGATTTGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR GCA 90 bp GCTCAGGAATCATTAGTATCCTTTCAACTTCCTCCCTCTGGCTCATaGCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCT +
Preference number: 1 (lower is better)
Translates to: AQESLVSFQLPPSGS*LLHEWLGGRFIKLS
Trigger: AGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGAGCCAGAGGGAGGAAGTTGAAAGGATACTAATGATTCCTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR GCA 90 bp ATCAGCCCTGGGAGGAAGGTCGGAAGATTATTGCTTAGCAAATCTTaGATACCAGCTAAAGAGGCAAGTACAATGCTATGGTACTTCCTC +
Preference number: 1 (lower is better)
Translates to: ISPGRKVGRLLLSKS*IPAKEASTMLWYFL
Trigger: GAGGAAGTACCATAGCATTGTACTTGCCTCTTTAGCTGGTATGCAAGATTTGCTAAGCAATAATCTTCCGACCTTCCTCCCAGGGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR GCA 90 bp TGTAGGAATTGGTTGATCTATTCAACATTTACCAAATACCTACTCTaGACCAAGCCCAGAGTTCAAGCAGACAATGTCTTCCATCTTGAG +
Preference number: 1 (lower is better)
Translates to: CRNWLIYSTFTKYLL*TKPRVQADNVFHLE
Trigger: CTCAAGATGGAAGACATTGTCTGCTTGAACTCTGGGCTTGGTGCAGAGTAGGTATTTGGTAAATGTTGAATAGATCAACCAATTCCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CAA 90 bp ATCTGGACTTGGGGGCAGGGATTGGACCACTTTACACAGCAGGTCTaGGCGCAGCTAGGTTGTCTAGATCTCAGGCCAGGGGCCCTTCAG +
Preference number: 2 (lower is better)
Translates to: IWTWGQGLDHFTQQV*AQLGCLDLRPGALQ
Trigger: CTGAAGGGCCCCTGGCCTGAGATCTAGACAACCTAGCTGCGCCAAGACCTGCTGTGTAAAGTGGTCCAATCCCTGCCCCCAAGTCCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGTCTACTGTAGGGGCATaGCAGGGGGTCACGGATCCC +
Preference number: 2 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWSTVGA*QGVTDP
Trigger: GGGATCCGTGACCCCCTGCCATGCCCCTACAGTAGA...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR CAA 90 bp CTCTCCTTGGCTTTCATTGCCCTCTGGGTCACAGATTCTGACCATTaGACAGAGGGGCTGGAATCTGGACTTGGGGGCAGGGATTGGACC +
Preference number: 2 (lower is better)
Translates to: LSLAFIALWVTDSDH*TEGLESGLGGRDWT
Trigger: GGTCCAATCCCTGCCCCCAAGTCCAGATTCCAGCCCCTCTGTCAAATGGTCAGAATCTGTGACCCAGAGGGCAATGAAAGCCAAGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp CTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGTCAGGACAGCATGAGTaGTCCTGGGAGGCTCACTAC +
Preference number: 2 (lower is better)
Translates to: LRQHVREPSPYKQKHVLGSGQHE*SWEAHY
Trigger: GTAGTGAGCCTCCCAGGATCACTCATGCTGTCCTGA...CCCCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR TCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGCAGATTCTGACCATTTaGCAGAGGGGCTGGAATCTG +
Preference number: 2 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLQILTI*QRGWNL
Trigger: CAGATTCCAGCCCCTCTGTCAAATGGTCAGAATCTG...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTGGCTGGACGTCTGTGTaGTGGGCAGAAAGGAACTGC +
Preference number: 2 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFGWTSV*WAERNC
Trigger: GCAGTTCCTTTCTGCCCATCACACAGACGTCCAGCC...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTCAGGGCAGGCGGAGCTaGACGGACCTCCTTTTCAGT +
Preference number: 2 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFQGRRS*TDLLFS
Trigger: ACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCCTG...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp CCAACTGCCGCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGTACACGCAGCCCTTCTaGTCTGCCCCTAACCTGGGT +
Preference number: 2 (lower is better)
Translates to: PTAANTNTVPCPPSLPREYTQPF*SAPNLG
Trigger: ACCCAGGTTAGGGGCAGATCAGAAGGGCTGCGTGTA...CTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGCGGCAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR GCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCCAGCACAGTGCTGGGTaGTGTAGCCACAGTATGTGG +
Preference number: 2 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSQHSAG*CSHSMW
Trigger: CCACATACTGTGGCTACAGCACCCAGCACTGTGCTG...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGTCTACTGTAGGGGCATaGCAGGGGGTCACGGATCCC +
Preference number: 2 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARSTVGA*QGVTDP
Trigger: GGGATCCGTGACCCCCTGCCATGCCCCTACAGTAGA...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGAGAGGGGCTGGAATCTaGACTTGGGGGCAGGGATTG +
Preference number: 2 (lower is better)
Translates to: GQAELNGPPFQSCSHLFERGAGI*TWGQGL
Trigger: CAATCCCTGCCCCCAAGTCCAGATTCCAGCCCCTCT...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp CTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGGATCTGCCCCTAACCTaGGTTCAGCTGGGCCTAGAT +
Preference number: 2 (lower is better)
Translates to: LRQHVREPSPYKQKHVLGDLPLT*VQLGLD
Trigger: ATCTAGGCCCAGCTGAACCCAGGTTAGGGGCAGATC...CCCCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR TCA 90 bp CTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGGGAGGCTCACTACCATaGAGAACTTTAGCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: LRQHVREPSPYKQKHVLGGGSLP*RTLAGE
Trigger: CTCCCCTGCTAAAGTTCTTCATGGTAGTGAGCCTCC...CCCCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR TCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCCTGGGTCACAGATTCTaGCCATTTGACAGAGGGGCT +
Preference number: 2 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSLGHRF*PFDRGA
Trigger: AGCCCCTCTGTCAAATGGTCAGAATCTGTGACCCAG...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTGGCTGGACGTCTGTGTaGTGGGCAGAAAGGAACTGC +
Preference number: 2 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFGWTSV*WAERNC
Trigger: GCAGTTCCTTTCTGCCCATCACACAGACGTCCAGCC...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCACTGCAGGCCACACATaGAGCCCCAGTTTAAGACTC +
Preference number: 2 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSTAGHT*SPSLRL
Trigger: GAGTCTTAAACTGGGGCTTCATGTGTGGCCTGCAGT...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGACACTATGGGGAACCTaGGAGTGCATGCCTCACGCA +
Preference number: 2 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWTLWGT*ECMPHA
Trigger: TGCGTGAGGCATGCACTCTCAGGTTCCCCATAGTGT...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR GCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCAGGGAGGCCCTTTGCTaGTTAGCTCCATCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSREALC*LAPSSV
Trigger: AACAGAGGATGGAGCTAAGCAGCAAAGGGCCTCCCT...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCCCTGTCCTGGGCCTTTaGAGGAAGGAATGCAGCTTT +
Preference number: 2 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSPVLGL*RKECSF
Trigger: AAAGCTGCATTCCTTCCTCCAAAGGCCCAGGACAGG...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGCCAAGGTCAGACTGTTaGGGGAGGGTCTTAGAAGCC +
Preference number: 2 (lower is better)
Translates to: GQAELNGPPFQSCSHLFEPRSDC*GRVLEA
Trigger: GGCTTCTAAGACCCTCCCCCAACAGTCTGACCTTGG...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CAA 90 bp GCAGGGATTGGACCACTTTACACAGCAGGTCTTGGCGCAGCTAGGTaGTCTAGATCTCAGGCCAGGGGCCCTTCAGATTTTCTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: AGIGPLYTAGLGAAR*SRSQARGPSDFLSL
Trigger: GAGAGAAAGAAAATCTGAAGGGCCCCTGGCCTGAGATCTAGACAACCTAGCTGCGCCAAGACCTGCTGTGTAAAGTGGTCCAATCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTCTCATGCCTGCTTCATaGATGGCTTGGAGGCAGGTT +
Preference number: 2 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFLMPAS*MAWRQV
Trigger: AACCTGCCTCCAAGCCATTCATGAAGCAGGCATGAG...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTTTCAGCAGGTGGGTATaGGAGATATGCCCCCAGCAA +
Preference number: 2 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFFSRWV*EICPQQ
Trigger: TTGCTGGGGGCATATCTCTCATACCCACCTGCTGAA...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGCTGGATCCCCTCCTCTaGCTTTCTCAGCAAGTGAAG +
Preference number: 2 (lower is better)
Translates to: GQAELNGPPFQSCSHLFELDPLL*LSQQVK
Trigger: CTTCACTTGCTGAGAAAGTCAGAGGAGGGGATCCAG...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp CCAACTGCCGCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGACTGCAGGCCACACATaGAGCCCCAGTTTAAGACTC +
Preference number: 2 (lower is better)
Translates to: PTAANTNTVPCPPSLPRETAGHT*SPSLRL
Trigger: GAGTCTTAAACTGGGGCTTCATGTGTGGCCTGCAGT...CTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGCGGCAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR TCA 90 bp CTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGACTAGGCCCTGTGTATaGCACACACCTTCACACATG +
Preference number: 2 (lower is better)
Translates to: LRQHVREPSPYKQKHVLGTRPCV*HTPSHM
Trigger: CATGTGTGAAGGTGTGTGTCATACACAGGGCCTAGT...CCCCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR TCA 90 bp CCAACTGCCGCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGTCCAGGACTGGAGCCTaGGAATGTGGATTCCAAGTC +
Preference number: 2 (lower is better)
Translates to: PTAANTNTVPCPPSLPRESRTGA*ECGFQV
Trigger: GACTTGGAATCCACATTCTCAGGCTCCAGTCCTGGA...CTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGCGGCAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTAGCACTGTCCTGTCCTaGGCCTTTGGAGGAAGGAAT +
Preference number: 2 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFSTVLS*AFGGRN
Trigger: ATTCCTTCCTCCAAAGGCCCAGGACAGGACAGTGCT...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGCTTGGGGGCAGGGATTaGACCACTTTACACAGCAGG +
Preference number: 2 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARLGGRD*TTLHSR
Trigger: CCTGCTGTGTAAAGTGGTCCAATCCCTGCCCCCAAG...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp GCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGAGGCATATGAGAGGGGCTGGAATCTaGACTTGGGGGCAGGGATTG +
Preference number: 2 (lower is better)
Translates to: ANTNTVPCPPSLPRERHMRGAGI*TWGQGL
Trigger: CAATCCCTGCCCCCAAGTCCAGATTCCAGCCCCTCT...CATATGCCTCTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CCA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGTCTCACACATGGGCCTaGATGGGTACTCTAGGTAGG +
Preference number: 2 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWSHTWA*MGTLGR
Trigger: CCTACCTAGAGTACCCATCCAGGCCCATGTGTGAGA...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCTCCTCTGTTCCAATCTaGAGACCCAGAATCCATGCG +
Preference number: 2 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSSSVPI*RPRIHA
Trigger: CGCATGGATTCTGGGTCTCCAGATTGGAACAGAGGA...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCAGCCGTCGGGTTTCTTaGTGTGTTCTGCAAGACCAT +
Preference number: 2 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSSRRVS*CVLQDH
Trigger: ATGGTCTTGCAGAACACACCAAGAAACCCGACGGCT...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CAA 90 bp GTAGCACTGTCCTGTCCTGGGCCTTTGGAGGAAGGAATGCAGCTTTaGAATCTCATTTCTCAGGACAGCATGAGTGATCCTGGGAGGCTC +
Preference number: 2 (lower is better)
Translates to: VALSCPGPLEEGMQL*NLISQDSMSDPGRL
Trigger: GAGCCTCCCAGGATCACTCATGCTGTCCTGAGAAATGAGATTCAAAAGCTGCATTCCTTCCTCCAAAGGCCCAGGACAGGACAGTGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CAA 90 bp GTACTTCCTCCCAGGACTCATCCTCCTTCCCTCCAGGACTCATCTTaGATTGCTGACTCCTGTTGGATGCTCCTAGAAAGGAACCACAGC +
Preference number: 2 (lower is better)
Translates to: VLPPRTHPPSLQDSS*IADSCWMLLERNHS
Trigger: GCTGTGGTTCCTTTCTAGGAGCATCCAACAGGAGTCAGCAATCAAAGATGAGTCCTGGAGGGAAGGAGGATGAGTCCTGGGAGGAAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CAA 90 bp GGACGTCTGTGTGATGGGCAGAAAGGAACTGCCAAGGTCAGACTGTaGGGGGAGGGTCTTAGAAGCCAGTATTCATATATGTCAGCCCTC +
Preference number: 2 (lower is better)
Translates to: GRLCDGQKGTAKVRL*GEGLRSQYSYMSAL
Trigger: GAGGGCTGACATATATGAATACTGGCTTCTAAGACCCTCCCCCAACAGTCTGACCTTGGCAGTTCCTTTCTGCCCATCACACAGACGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CAA 90 bp GTGCAGAAGGGCTGGTATGTGTGTGGTGAATTCAAGGGAGGCCCTTaGCTGCTTAGCTCCATCCTCTGTTCCAATCTGGAGACCCAGAAT +
Preference number: 2 (lower is better)
Translates to: VQKGWYVCGEFKGGP*LLSSILCSNLETQN
Trigger: ATTCTGGGTCTCCAGATTGGAACAGAGGATGGAGCTAAGCAGCAAAGGGCCTCCCTTGAATTCACCACACACATACCAGCCCTTCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CAA 90 bp CCAGGACTGGAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATaGCCCACCCTCTCCAATCACTCAGACAGCATGTCAGGGAGCCAT +
Preference number: 2 (lower is better)
Translates to: PGLEPENVDSKSFHI*PTLSNHSDSMSGSH
Trigger: ATGGCTCCCTGACATGCTGTCTGAGTGATTGGAGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTCCAGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR TCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTGGAGGCTCACTACCATaGAGAACTTTAGCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTGGSLP*RTLAGE
Trigger: CTCCCCTGCTAAAGTTCTTCATGGTAGTGAGCCTCC...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTTTTCTCAGGACAGCATaGGTGATCCTGGGAGGCTCA +
Preference number: 2 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTFLRTA*VILGGS
Trigger: TGAGCCTCCCAGGATCACTCATGCTGTCCTGAGAAA...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCCTCATCTTTGATTGCTaGCTCCTGTTGGATGCTCCT +
Preference number: 2 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSLIFDC*LLLDAP
Trigger: AGGAGCATCCAACAGGAGTCAGCAATCAAAGATGAG...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGCAGGGCAGGCGGAGCTaGACGGACCTCCTTTTCAGT +
Preference number: 2 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRQGRRS*TDLLFS
Trigger: ACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCCTG...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp CCAACTGCCGCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGGCCCTGCTGACATCTTaGTTTTGGATTTCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: PTAANTNTVPCPPSLPREALLTS*FWISGL
Trigger: GAGGCCAGAAATCCAAAATCAAGATGTCAGCAGGGC...CTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGCGGCAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR GCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGCCTCTGGCTCATGCCTaGTTCATGAATGGCTTGGAG +
Preference number: 2 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARPLAHA*FMNGLE
Trigger: CTCCAAGCCATTCATGAAGCAGGCATGAGCCAGAGG...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR GCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTCCTCTGGCTCATGCCTaGTTCATGAATGGCTTGGAG +
Preference number: 2 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTPLAHA*FMNGLE
Trigger: CTCCAAGCCATTCATGAAGCAGGCATGAGCCAGAGG...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR GCA 90 bp GCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGAGGCATATGGAGACCCAGAATCCATaGGTATGTAGGGGGCCCACT +
Preference number: 2 (lower is better)
Translates to: ANTNTVPCPPSLPRERHMETQNP*VCRGPT
Trigger: AGTGGGCCCCCTACATACGCATGGATTCTGGGTCTC...CATATGCCTCTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CCA 90 bp CTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGGCAAGTACAATGCTATaGTACTTCCTCCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: LRQHVREPSPYKQKHVLGASTML*YFLPGL
Trigger: GAGTCCTGGGAGGAAGTACCATAGCATTGTACTTGC...CCCCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CCA 90 bp GCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGAGGCATATGCCAAGGTCAGACTGTTaGGGGAGGGTCTTAGAAGCC +
Preference number: 2 (lower is better)
Translates to: ANTNTVPCPPSLPRERHMPRSDC*GRVLEA
Trigger: GGCTTCTAAGACCCTCCCCCAACAGTCTGACCTTGG...CATATGCCTCTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTTCTCACACATGGGCCTaGATGGGTACTCTAGGTAGG +
Preference number: 2 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFSHTWA*MGTLGR
Trigger: CCTACCTAGAGTACCCATCCAGGCCCATGTGTGAGA...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGGAGGACTCTCACACATaGGCCTGGATGGGTACTCTA +
Preference number: 2 (lower is better)
Translates to: ASEEKIQQVGMRDMPPAREDSHT*AWMGTL
Trigger: TAGAGTACCCATCCAGGCCCATGTGTGAGAGTCCTC...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGGAAGAAAGATGGAGTTaGTGGAGCATTGCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: ASEEKIQQVGMRDMPPAREERWS*WSIAPG
Trigger: GCCTGGAGCAATGCTCCATCAACTCCATCTTTCTTC...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGCACACGCAAACTTCATaGGGGCAGAAGAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWHTQTS*GQKKDG
Trigger: TCCATCTTTCTTCTGCCCTCATGAAGTTTGCGTGTG...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR TCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTACCCTTCCCTGGCTCTaGAAGGGATTTCTTATCTTG +
Preference number: 2 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFTLPWL*KGFLIL
Trigger: CAAGATAAGAAATCCCTTTCAGAGCCAGGGAAGGGT...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTTCCAGGACTCATCTTTaGTTGCTGACTCCTGTTGGA +
Preference number: 2 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFSRTHL*LLTPVG
Trigger: TCCAACAGGAGTCAGCAATCAAAGATGAGTCCTGGA...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGCAGATTCTGACCATTTaGCAGAGGGGCTGGAATCTG +
Preference number: 2 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARQILTI*QRGWNL
Trigger: CAGATTCCAGCCCCTCTGTCAAATGGTCAGAATCTG...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR GCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTGAGTTGATGGAGCATTaGTCCAGGCACACCAACAAG +
Preference number: 2 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFELMEH*SRHTNK
Trigger: CTTGTTGGTGTGCCTGGAGCAATGCTCCATCAACTC...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR GCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGTTGCTTAGCAAATCTTaGATACCAGCTAAAGAGGCA +
Preference number: 2 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLLLSKS*IPAKEA
Trigger: TGCCTCTTTAGCTGGTATGCAAGATTTGCTAAGCAA...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR GCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTCTCCTTGGCTTTCATTaGCCTCTGGGTCACAGATTC +
Preference number: 2 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFLLGFH*PLGHRF
Trigger: GAATCTGTGACCCAGAGGGCAATGAAAGCCAAGGAG...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTACCTGTCCTGGGCCTTTaGAGGAAGGAATGCAGCTTT +
Preference number: 2 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLPVLGL*RKECSF
Trigger: AAAGCTGCATTCCTTCCTCCAAAGGCCCAGGACAGG...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTAGGCCAAACATGACCTaGTTCATGTACAGGAGGTGC +
Preference number: 2 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTRPNMT*FMYRRC
Trigger: GCACCTCCTGTACATGAACCAGGTCATGTTTGGCCT...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CAA 90 bp GACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTaGAGCTTTCTCCACATCAGTATTAGGGACCTGTTTGTAGGGTCA +
Preference number: 2 (lower is better)
Translates to: DHKQPHGRLRPDDSL*SFLHISIRDLFVGS
Trigger: TGACCCTACAAACAGGTCCCTAATACTGATGTGGAGAAAGCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGTCAGGACAGCATGAGTaGTCCTGGGAGGCTCACTAC +
Preference number: 2 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRSGQHE*SWEAHY
Trigger: GTAGTGAGCCTCCCAGGATCACTCATGCTGTCCTGA...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTCTCATGCCTGCTTCATaGATGGCTTGGAGGCAGGTT +
Preference number: 2 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFLMPAS*MAWRQV
Trigger: AACCTGCCTCCAAGCCATTCATGAAGCAGGCATGAG...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR TCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTACACAAGGCCAAACATaGCCTGGTTCATGTACAGGA +
Preference number: 2 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFTQGQT*PGSCTG
Trigger: TCCTGTACATGAACCAGGTCATGTTTGGCCTTGTGT...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTCTCATCTTTGATTGCTaGCTCCTGTTGGATGCTCCT +
Preference number: 2 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFLIFDC*LLLDAP
Trigger: AGGAGCATCCAACAGGAGTCAGCAATCAAAGATGAG...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp GAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATTGCCCACCCTCTCCAATCTGGGTCACAGATTCTaGCCATTTGACAGAGGGGCT +
Preference number: 2 (lower is better)
Translates to: EPENVDSKSFHILPTLSNLGHRF*PFDRGA
Trigger: AGCCCCTCTGTCAAATGGTCAGAATCTGTGACCCAG...ATTGGAGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR TCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGACACTATGGGGAACCTaGGAGTGCATGCCTCACGCA +
Preference number: 2 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRTLWGT*ECMPHA
Trigger: TGCGTGAGGCATGCACTCTCAGGTTCCCCATAGTGT...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR GCA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTCCTCCCTCTGGCTCATaGCTGCTTCATGAATGGCTT +
Preference number: 2 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIAPPSGS*LLHEWL
Trigger: AAGCCATTCATGAAGCAGGCATGAGCCAGAGGGAGG...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR GCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAGAGTTGATGGAGCATTaGTCCAGGCACACCAACAAG +
Preference number: 2 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLELMEH*SRHTNK
Trigger: CTTGTTGGTGTGCCTGGAGCAATGCTCCATCAACTC...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAAGGCCAAACATGACCTaGTTCATGTACAGGAGGTGC +
Preference number: 2 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLRPNMT*FMYRRC
Trigger: GCACCTCCTGTACATGAACCAGGTCATGTTTGGCCT...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTCTTGTGGATCAACTCTaGGGATCCATGAATCACCAA +
Preference number: 2 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFLVDQL*GSMNHQ
Trigger: TTGGTGATTCATGGATCCCCAGAGTTGATCCACAAG...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTGAGGACTCTCACACATaGGCCTGGATGGGTACTCTA +
Preference number: 2 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFEDSHT*AWMGTL
Trigger: TAGAGTACCCATCCAGGCCCATGTGTGAGAGTCCTC...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR CAA 90 bp CAGAATCTCACAGAATCTAGGGTAGCACTGTCCTGTCCTGGGCCTTaGGAGGAAGGAATGCAGCTTTTGAATCTCATTTCTCAGGACAGC +
Preference number: 2 (lower is better)
Translates to: QNLTESRVALSCPGP*EEGMQLLNLISQDS
Trigger: GCTGTCCTGAGAAATGAGATTCAAAAGCTGCATTCCTTCCTCCAAAGGCCCAGGACAGGACAGTGCTACCCTAGATTCTGTGAGATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTGACTTTCTCAGCAAGTaGAGAGAAGATTCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFDFLSK*REDSAG
Trigger: ACCTGCTGAATCTTCTCTTCACTTGCTGAGAAAGTC...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTTTGTTCACACCTTTTTaGGGGCCAGGTCTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFLFTPF*GPGLSL
Trigger: CAGAGAGAGACCTGGCCCTCAAAAAGGTGTGAACAA...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR TCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTCGGGTATTTGTTGAGTaGGTGAGTGAAGAACCTACA +
Preference number: 2 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFRVFVE*VSEEPT
Trigger: TGTAGGTTCTTCACTCACTCACTCAACAAATACCCG...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTGGAGGGTGGCCCTGCTaGCATCTTGATTTTGGATTT +
Preference number: 2 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFGGWPC*HLDFGF
Trigger: AAATCCAAAATCAAGATGTCAGCAGGGCCACCCTCC...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR GCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTAAGAGGCAAGTACAATaGTATGGTACTTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFKRQVQ*YGTSSQ
Trigger: CTGGGAGGAAGTACCATAGCATTGTACTTGCCTCTT...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR GCA 90 bp GAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATTGCCCACCCTCTCCAATGTAAGGAGCAGAGTGTaGAGAAGGGCTGGTATGTGT +
Preference number: 2 (lower is better)
Translates to: EPENVDSKSFHILPTLSNVRSRV*RRAGMC
Trigger: ACACATACCAGCCCTTCTGCACACTCTGCTCCTTAC...ATTGGAGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTTGCCTGCTTCATGAATaGCTTGGAGGCAGGTTTATA +
Preference number: 2 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTCLLHE*LGGRFI
Trigger: TATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCA...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTCTTGGGGGCAGGGATTaGACCACTTTACACAGCAGG +
Preference number: 2 (lower is better)
Translates to: KPVFIYVSPLNISELSWLLGGRD*TTLHSR
Trigger: CCTGCTGTGTAAAGTGGTCCAATCCCTGCCCCCAAG...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTAGCAGAAACACGTCCTaGGGCCCAGCTCTTTATTTG +
Preference number: 2 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFSRNTS*GPALYL
Trigger: CAAATAAAGAGCTGGGCCCCAGGACGTGTTTCTGCT...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CCA 90 bp GCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGAGGCATATGGCAACCTGTTCTGGCTaGCACAACCACAAAGTTTGT +
Preference number: 2 (lower is better)
Translates to: ANTNTVPCPPSLPRERHMATCSG*HNHKVC
Trigger: ACAAACTTTGTGGTTGTGCCAGCCAGAACAGGTTGC...CATATGCCTCTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR TCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGGAAGAAAGATGGAGTTaGTGGAGCATTGCTCCAGGC +
Preference number: 2 (lower is better)
Translates to: SENMEAVGFLGVFCKTIREERWS*WSIAPG
Trigger: GCCTGGAGCAATGCTCCATCAACTCCATCTTTCTTC...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTACCCTTCCCTGGCTCTaGAAGGGATTTCTTATCTTG +
Preference number: 2 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFTLPWL*KGFLIL
Trigger: CAAGATAAGAAATCCCTTTCAGAGCCAGGGAAGGGT...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR GCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTCCTCCCTCTGGCTCATaGCTGCTTCATGAATGGCTT +
Preference number: 2 (lower is better)
Translates to: KPVFIYVSPLNISELSWLPPSGS*LLHEWL
Trigger: AAGCCATTCATGAAGCAGGCATGAGCCAGAGGGAGG...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTATGCCTGCTTCATGAATaGCTTGGAGGCAGGTTTATA +
Preference number: 2 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLCLLHE*LGGRFI
Trigger: TATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCA...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGACACAAGGCCAAACATaGCCTGGTTCATGTACAGGA +
Preference number: 2 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRTQGQT*PGSCTG
Trigger: TCCTGTACATGAACCAGGTCATGTTTGGCCTTGTGT...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGTCCAGGACTCATCTTTaGTTGCTGACTCCTGTTGGA +
Preference number: 2 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRSRTHL*LLTPVG
Trigger: TCCAACAGGAGTCAGCAATCAAAGATGAGTCCTGGA...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp GAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATTGCCCACCCTCTCCAATCAGATGATTCCCTCTTaGGCTTTCTCCACATCAGTA +
Preference number: 2 (lower is better)
Translates to: EPENVDSKSFHILPTLSNQMIPS*AFSTSV
Trigger: TACTGATGTGGAGAAAGCTCAAGAGGGAATCATCTG...ATTGGAGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR GCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTAGGTCGGAAGATTATTaGTTAGCAAATCTTGCATAC +
Preference number: 2 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFRSEDY*LANLAY
Trigger: GTATGCAAGATTTGCTAAGCAATAATCTTCCGACCT...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR GCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTCTCCTTGGCTTTCATTaGCCTCTGGGTCACAGATTC +
Preference number: 2 (lower is better)
Translates to: KPVFIYVSPLNISELSWLLLGFH*PLGHRF
Trigger: GAATCTGTGACCCAGAGGGCAATGAAAGCCAAGGAG...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR GCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGACACACCTTCACACATaGCATTCTCTCTGCTTGGAG +
Preference number: 2 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRTHLHT*HSLCLE
Trigger: CTCCAAGCAGAGAGAATGGCATGTGTGAAGGTGTGT...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp GCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGAGGCATATGGGATTTCTTATCTTGTaGATCAACTCTGGGGATCCA +
Preference number: 2 (lower is better)
Translates to: ANTNTVPCPPSLPRERHMGFLIL*INSGDP
Trigger: TGGATCCCCAGAGTTGATCCACAAGATAAGAAATCC...CATATGCCTCTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR GCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGAAGAGGCAAGTACAATaGTATGGTACTTCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRKRQVQ*YGTSSQ
Trigger: CTGGGAGGAAGTACCATAGCATTGTACTTGCCTCTT...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTGCTTTCATTGCCCTCTaGGTCACAGATTCTGACCAT +
Preference number: 2 (lower is better)
Translates to: KPVFIYVSPLNISELSWLAFIAL*VTDSDH
Trigger: ATGGTCAGAATCTGTGACCCAGAGGGCAATGAAAGC...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTGTGGGCTGTAGGAATTaGTTGATCTATTCAACATTT +
Preference number: 2 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFVGCRN*LIYSTF
Trigger: AAATGTTGAATAGATCAACCAATTCCTACAGCCCAC...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR GCA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTTTCATGTACAGGAGGTaGTCAGGAATCATTAGTATC +
Preference number: 2 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIAFMYRR*SGIISI
Trigger: GATACTAATGATTCCTGAGCACCTCCTGTACATGAA...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTCTTGTGGATCAACTCTaGGGATCCATGAATCACCAA +
Preference number: 2 (lower is better)
Translates to: KPVFIYVSPLNISELSWLLVDQL*GSMNHQ
Trigger: TTGGTGATTCATGGATCCCCAGAGTTGATCCACAAG...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTATTGCTGACTCCTGTTaGATGCTCCTAGAAAGGAAC +
Preference number: 2 (lower is better)
Translates to: KPVFIYVSPLNISELSWLIADSC*MLLERN
Trigger: GTTCCTTTCTAGGAGCATCCAACAGGAGTCAGCAAT...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CCA 90 bp TTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGTTTTAAGCCATCAATGTGGAAAGGGCTACTaGATCCCCTCCTCTGACTTT +
Preference number: 2 (lower is better)
Translates to: FLASRTVREYTSTVLSHQCGKGY*IPSSDF
Trigger: AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACA...TTGATGGCTTAAAACAGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAGTGGGCTGTAGGAATTaGTTGATCTATTCAACATTT +
Preference number: 2 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLVGCRN*LIYSTF
Trigger: AAATGTTGAATAGATCAACCAATTCCTACAGCCCAC...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR GCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTAGGTCGGAAGATTATTaGTTAGCAAATCTTGCATAC +
Preference number: 2 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFRSEDY*LANLAY
Trigger: GTATGCAAGATTTGCTAAGCAATAATCTTCCGACCT...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR GCA 90 bp TTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGTTTTAAGCCATCAAGAGTTGTTGCTTTTCTaGCAGGACCACAAACAGCCT +
Preference number: 2 (lower is better)
Translates to: FLASRTVREYTSTVLSHQELLLF*QDHKQP
Trigger: AGGCTGTTTGTGGTCCTGGCAGAAAAGCAACAACTC...TTGATGGCTTAAAACAGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CCA 90 bp CATCTTGATTTTGGATTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGCTTTCATTGCCCTCTaGGTCACAGATTCTGACCAT +
Preference number: 2 (lower is better)
Translates to: HLDFGFLASRTVREYTSTAFIAL*VTDSDH
Trigger: ATGGTCAGAATCTGTGACCCAGAGGGCAATGAAAGC...AGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAATCCAAAATCAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CCA 90 bp TTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGTTTTAAGCCATCAATGGAGCCTGAGAATGTaGATTCCAAGTCATTCCACA +
Preference number: 2 (lower is better)
Translates to: FLASRTVREYTSTVLSHQWSLRM*IPSHST
Trigger: TGTGGAATGACTTGGAATCCACATTCTCAGGCTCCA...TTGATGGCTTAAAACAGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR GCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGCCCTGGAACCTCATTTaGTTAATTAGCAATTTATCA +
Preference number: 2 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRPWNLI*LISNLS
Trigger: TGATAAATTGCTAATTAAGCAAATGAGGTTCCAGGG...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR TCA 90 bp TTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGTTTTAAGCCATCAAGCTGTAGGAATTGGTTaGTCTATTCAACATTTACCA +
Preference number: 2 (lower is better)
Translates to: FLASRTVREYTSTVLSHQAVGIG*SIQHLP
Trigger: TGGTAAATGTTGAATAGATCAACCAATTCCTACAGC...TTGATGGCTTAAAACAGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR CCA 72 bp GCTGGCCAGAAGGGAGAGGACTCTCACACATGGGCCTaGATGGGTACTCTAGGTAGGGCTGGACAATGTAGG +
Preference number: 3 (lower is better)
Translates to: AGQKGEDSHTWA*MGTLGRAGQCR
Trigger: CCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCATGTGTGAGAGTCCTCTCCCTTCTGGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CCA 72 bp CCACAAACTAGAAGAGAAAAGGAGAGGGTTTCCCCCTaGAGTCTCCAGAGGGAGGGTGGCCCTGCTGACATC +
Preference number: 3 (lower is better)
Translates to: PQTRREKERVSP*SLQREGGPADI
Trigger: GATGTCAGCAGGGCCACCCTCCCTCTGGAGACTCCAGGGGGAAACCCTCTCCTTTTCTCTTCTAGTTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CAA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGCTTGGCGCAGCTAGGTaGTCTAGATCTCAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWLGAAR*SRSQAR
Trigger: CCTGGCCTGAGATCTAGACAACCTAGCTGCGCCAAG...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CAA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTACCCCTCTGCTCTCCTaGGCTTTCATTGCCCTCTGG +
Preference number: 3 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFTPLLS*AFIALW
Trigger: CCAGAGGGCAATGAAAGCCAAGGAGAGCAGAGGGGT...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTACTTGGGGGCAGGGATaGGACCACTTTACACAGCAG +
Preference number: 3 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFTWGQG*DHFTQQ
Trigger: CTGCTGTGTAAAGTGGTCCAATCCCTGCCCCCAAGT...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGACTTGGGGGCAGGGATaGGACCACTTTACACAGCAG +
Preference number: 3 (lower is better)
Translates to: GQAELNGPPFQSCSHLFETWGQG*DHFTQQ
Trigger: CTGCTGTGTAAAGTGGTCCAATCCCTGCCCCCAAGT...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTTCCTGTCCTGGGCCTTaGGAGGAAGGAATGCAGCTT +
Preference number: 3 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFSCPGP*EEGMQL
Trigger: AAGCTGCATTCCTTCCTCCAAAGGCCCAGGACAGGA...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTACTTGGCGCAGCTAGGTaGTCTAGATCTCAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLLGAAR*SRSQAR
Trigger: CCTGGCCTGAGATCTAGACAACCTAGCTGCGCCAAG...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCACAATGTCTTCCATCTaGAGGCTCAGGGTGATGGGA +
Preference number: 3 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSTMSSI*RLRVMG
Trigger: TCCCATCACCCTGAGCCTCAAGATGGAAGACATTGT...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR TCA 72 bp CTGAGGCCTCGTCAGTCAGCTCTTCCTTTGGTCGGGTaGATTTCACAGATACCCTTCTGTAGTGGGCCAGAT +
Preference number: 3 (lower is better)
Translates to: LRPRQSALPLVG*ISQIPFCSGPD
Trigger: ATCTGGCCCACTACAGAAGGGTATCTGTGAAATTCACCCGACCAAAGGAAGAGCTGACTGACGAGGCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR GCA 72 bp GGTATGTGTGTGGTGAATTCAAGGGAGGCCCTTTGCTaGTTAGCTCCATCCTCTGTTCCAATCTGGAGACCC +
Preference number: 3 (lower is better)
Translates to: GMCVVNSREALC*LAPSSVPIWRP
Trigger: GGGTCTCCAGATTGGAACAGAGGATGGAGCTAAGCAGCAAAGGGCCTCCCTTGAATTCACCACACACATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTTTTACACAGCAGGTCTaGGCGCAGCTAGGTTGTCTA +
Preference number: 3 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFFTQQV*AQLGCL
Trigger: TAGACAACCTAGCTGCGCCAAGACCTGCTGTGTAAA...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTTCTCCTTGGCTTTCATaGCCCTCTGGGTCACAGATT +
Preference number: 3 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFSPWLS*PSGSQI
Trigger: AATCTGTGACCCAGAGGGCAATGAAAGCCAAGGAGA...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp GAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATTGCCCACCCTCTCCAATACCCCTCTGCTCTCCTaGGCTTTCATTGCCCTCTGG +
Preference number: 3 (lower is better)
Translates to: EPENVDSKSFHILPTLSNTPLLS*AFIALW
Trigger: CCAGAGGGCAATGAAAGCCAAGGAGAGCAGAGGGGT...ATTGGAGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CAA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAGGAGTTGATGGAGCATaGCTCCAGGCACACCAACAA +
Preference number: 3 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLGVDGA*LQAHQQ
Trigger: TTGTTGGTGTGCCTGGAGCAATGCTCCATCAACTCC...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp CAAGAATGGTGGCAGCCACCACAAACTAGAAGAGAAAAGGAGAGGGTTTCCCCCTTTACACAGCAGGTCTaGGCGCAGCTAGGTTGTCTA +
Preference number: 3 (lower is better)
Translates to: QEWWQPPQTRREKERVSPFTQQV*AQLGCL
Trigger: TAGACAACCTAGCTGCGCCAAGACCTGCTGTGTAAA...GGGGGAAACCCTCTCCTTTTCTCTTCTAGTTTGTGGTGGCTGCCACCATTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CAA 90 bp GAAATCAGACTCTCTCCTGGGATTGGAACTGTGAGCAGGATGATACAGGGAAGGAAGCCGTCGGGTTTCTaGGTGTGTTCTGCAAGACCA +
Preference number: 3 (lower is better)
Translates to: EIRLSPGIGTVSRMIQGRKPSGF*VCSARP
Trigger: TGGTCTTGCAGAACACACCAAGAAACCCGACGGCTT...CCTTCCCTGTATCATCCTGCTCACAGTTCCAATCCCAGGAGAGAGTCTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR GCA 72 bp ATAGCCACAGTCAGACAACAACAGCACAGTGCTGGGTaGTGTAGCCACAGTATGTGGAAAGGGCTACTGGAT +
Preference number: 3 (lower is better)
Translates to: IATVRQQQHSAG*CSHSMWKGLLD
Trigger: ATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACCCAGCACTGTGCTGTTGTTGTCTGACTGTGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CCA 72 bp AGTGATGCAGCCACAGCCAAGGAAAGCCAAGAATGGTaGCAGCCACCACAAACTAGAAGAGAAAAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: SDAATAKESQEW*QPPQTRREKER
Trigger: CCTCTCCTTTTCTCTTCTAGTTTGTGGTGGCTGCCACCATTCTTGGCTTTCCTTGGCTGTGGCTGCATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CAA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCGAAGGAATGCAGCTTTaGAATCTCATTTCTCAGGAC +
Preference number: 3 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSEGMQL*NLISQD
Trigger: GTCCTGAGAAATGAGATTCAAAAGCTGCATTCCTTC...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTATCTCCTTGGCTTTCATaGCCCTCTGGGTCACAGATT +
Preference number: 3 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLSPWLS*PSGSQI
Trigger: AATCTGTGACCCAGAGGGCAATGAAAGCCAAGGAGA...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTACTTGTTCACACCTTTTaGAGGGCCAGGTCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLLVHTF*RARSLS
Trigger: AGAGAGAGACCTGGCCCTCAAAAAGGTGTGAACAAG...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR TCA 72 bp TCATCCTCCTTCCCTCCAGGACTCATCTTTGATTGCTaGCTCCTGTTGGATGCTCCTAGAAAGGAACCACAG +
Preference number: 3 (lower is better)
Translates to: SSSFPPGLIFDC*LLLDAPRKEPQ
Trigger: CTGTGGTTCCTTTCTAGGAGCATCCAACAGGAGTCAGCAATCAAAGATGAGTCCTGGAGGGAAGGAGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR TCA 72 bp CACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTaGCTTTCTCAGCAAGTGAAGAGAAGATTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: HSMWKGLLDPLL*LSQQVKRRFSR
Trigger: CCTGCTGAATCTTCTCTTCACTTGCTGAGAAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CCA 72 bp TCTTGCATACCAGCTAAAGAGGCAAGTACAATGCTATaGTACTTCCTCCCAGGACTCATCCTCCTTCCCTCC +
Preference number: 3 (lower is better)
Translates to: SCIPAKEASTML*YFLPGLILLPS
Trigger: GGAGGGAAGGAGGATGAGTCCTGGGAGGAAGTACCATAGCATTGTACTTGCCTCTTTAGCTGGTATGCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CCA 72 bp TTGAGTGATGCAGCCACAGCCAAGGAAAGCCAAGAATaGTGGCAGCCACCACAAACTAGAAGAGAAAAGGAG +
Preference number: 3 (lower is better)
Translates to: LSDAATAKESQE*WQPPQTRREKE
Trigger: CTCCTTTTCTCTTCTAGTTTGTGGTGGCTGCCACCATTCTTGGCTTTCCTTGGCTGTGGCTGCATCACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CAA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTGAAGGAATGCAGCTTTaGAATCTCATTTCTCAGGAC +
Preference number: 3 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFEGMQL*NLISQD
Trigger: GTCCTGAGAAATGAGATTCAAAAGCTGCATTCCTTC...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGAGCTTTCTGAGTTGCTaGCAGAATCTCACAGAATCT +
Preference number: 3 (lower is better)
Translates to: GQAELNGPPFQSCSHLFESFLSC*QNLTES
Trigger: AGATTCTGTGAGATTCTGCAAGCAACTCAGAAAGCT...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp CAAGAATGGTGGCAGCCACCACAAACTAGAAGAGAAAAGGAGAGGGTTTCCCCCAGGTTAGATTGTCACTaGCTCAGGAAAGCCTTCTCA +
Preference number: 3 (lower is better)
Translates to: QEWWQPPQTRREKERVSPRLDCH*LRKAFS
Trigger: TGAGAAGGCTTTCCTGAGCAAGTGACAATCTAACCT...GGGGGAAACCCTCTCCTTTTCTCTTCTAGTTTGTGGTGGCTGCCACCATTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR TCA 72 bp GGCTACTGGATCCCCTCCTCTGACTTTCTCAGCAAGTaGAGAGAAGATTCAGCAGGTGGGTATGAGAGATAT +
Preference number: 3 (lower is better)
Translates to: GYWIPSSDFLSK*REDSAGGYERY
Trigger: ATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGCTGAGAAAGTCAGAGGAGGGGATCCAGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR TCA 72 bp GTTGGACTAAGCCGAAACATGACTGCAGGCCACACATaGAGCCCCAGTTTAAGACTCTTCCAACGGGTATTT +
Preference number: 3 (lower is better)
Translates to: VGLSRNMTAGHT*SPSLRLFQRVF
Trigger: AAATACCCGTTGGAAGAGTCTTAAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR TCA 72 bp GACAGAGGCACTGGAAGACTTGACATACACAGACACTaGAGTGAGATCAGAGGCAGAGACTTGAGTGATGCA +
Preference number: 3 (lower is better)
Translates to: DRGTGRLDIHRH*SEIRGRDLSDA
Trigger: TGCATCACTCAAGTCTCTGCCTCTGATCTCACTTCAGTGTCTGTGTATGTCAAGTCTTCCAGTGCCTCTGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR CCA 72 bp TCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTaGGAGAGGCATCGCTCATCTCTTAGCCTTGGTTTC +
Preference number: 3 (lower is better)
Translates to: SKPDSATSNCDI*ERHRSSLSLGF
Trigger: GAAACCAAGGCTAAGAGATGAGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CCA 72 bp GTGATGGGCAGAAAGGAACTGCCAAGGTCAGACTGTTaGGGGAGGGTCTTAGAAGCCAGTATTCATATATGT +
Preference number: 3 (lower is better)
Translates to: VMGRKELPRSDC*GRVLEASIHIC
Trigger: ACATATATGAATACTGGCTTCTAAGACCCTCCCCCAACAGTCTGACCTTGGCAGTTCCTTTCTGCCCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CCA 72 bp AGTTTGTGCCAAATCCAGGACTGGAGCCTGAGAATGTaGATTCCAAGTCATTCCACATATTGCCCACCCTCT +
Preference number: 3 (lower is better)
Translates to: SLCQIQDWSLRM*IPSHSTYCPPS
Trigger: AGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTCCAGTCCTGGATTTGGCACAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR CCA 72 bp CTGGCACAACCACAAAGTTTGTGCCAAATCCAGGACTaGAGCCTGAGAATGTGGATTCCAAGTCATTCCACA +
Preference number: 3 (lower is better)
Translates to: LAQPQSLCQIQD*SLRMWIPSHST
Trigger: TGTGGAATGACTTGGAATCCACATTCTCAGGCTCCAGTCCTGGATTTGGCACAAACTTTGTGGTTGTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR CCA 72 bp CCAACTGAATTCCTGTCACTTGCAACCTGTTCTGGCTaGCACAACCACAAAGTTTGTGCCAAATCCAGGACT +
Preference number: 3 (lower is better)
Translates to: PTEFLSLATCSG*HNHKVCAKSRT
Trigger: AGTCCTGGATTTGGCACAAACTTTGTGGTTGTGCCAGCCAGAACAGGTTGCAAGTGACAGGAATTCAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR-3UTR CAA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTAGCTTTCTGAGTTGCTaGCAGAATCTCACAGAATCT +
Preference number: 3 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTSFLSC*QNLTES
Trigger: AGATTCTGTGAGATTCTGCAAGCAACTCAGAAAGCT...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGCTGTAGGAATTGGTaGATCTATTCAACATTTACC +
Preference number: 3 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWGCRNW*IYSTFT
Trigger: GGTAAATGTTGAATAGATCAACCAATTCCTACAGCC...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR TCA 72 bp GGGGATAATTCTCTTTCTCCAACACAAGGCCAAACATaGCCTGGTTCATGTACAGGAGGTGCTCAGGAATCA +
Preference number: 3 (lower is better)
Translates to: GDNSLSPTQGQT*PGSCTGGAQES
Trigger: TGATTCCTGAGCACCTCCTGTACATGAACCAGGTCATGTTTGGCCTTGTGTTGGAGAAAGAGAATTATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR GCA 72 bp CTCACATCAGCCCTGGGAGGAAGGTCGGAAGATTATTaGTTAGCAAATCTTGCATACCAGCTAAAGAGGCAA +
Preference number: 3 (lower is better)
Translates to: LTSALGGRSEDY*LANLAYQLKRQ
Trigger: TTGCCTCTTTAGCTGGTATGCAAGATTTGCTAAGCAATAATCTTCCGACCTTCCTCCCAGGGCTGATGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGAGGTTAGATTGTCACTaGCTCAGGAAAGCCTTCTCA +
Preference number: 3 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRRLDCH*LRKAFS
Trigger: TGAGAAGGCTTTCCTGAGCAAGTGACAATCTAACCT...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp CATCTTGATTTTGGATTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTCTGAATTCCTGTCACTaGCAACCTGTTCTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: HLDFGFLASRTVREYTSTLNSCH*QPVLAG
Trigger: GCCAGCCAGAACAGGTTGCAAGTGACAGGAATTCAG...AGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAATCCAAAATCAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR GCA 72 bp ACAAGGCCAAACATGACCTGGTTCATGTACAGGAGGTaGTCAGGAATCATTAGTATCCTTTCAACTTCCTCC +
Preference number: 3 (lower is better)
Translates to: TRPNMTWFMYRR*SGIISILSTSS
Trigger: GGAGGAAGTTGAAAGGATACTAATGATTCCTGAGCACCTCCTGTACATGAACCAGGTCATGTTTGGCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CCA 72 bp ACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATaGTCCCTGATACATTATACACACCTGTACTTAGTA +
Preference number: 3 (lower is better)
Translates to: TCSGKPSHFLGP*SLIHYTHLYLV
Trigger: TACTAAGTACAGGTGTGTATAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR GCA 72 bp GGGAGGAAGGTCGGAAGATTATTGCTTAGCAAATCTTaGATACCAGCTAAAGAGGCAAGTACAATGCTATGG +
Preference number: 3 (lower is better)
Translates to: GRKVGRLLLSKS*IPAKEASTMLW
Trigger: CCATAGCATTGTACTTGCCTCTTTAGCTGGTATGCAAGATTTGCTAAGCAATAATCTTCCGACCTTCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR-3UTR CAA 90 bp TTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGTTTTAAGCCATCAACTTGATGTCAGTTTGTaGCTTATACCCTCAAACTCT +
Preference number: 3 (lower is better)
Translates to: FLASRTVREYTSTVLSHQLDVSL*LIPSNS
Trigger: AGAGTTTGAGGGTATAAGCAACAAACTGACATCAAG...TTGATGGCTTAAAACAGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR CCA 72 bp AACCTCATTTGCTTAATTAGCAATTTATCATTTGGATaGCAGGTTAGATTGTCACTTGCTCAGGAAAGCCTT +
Preference number: 3 (lower is better)
Translates to: NLICLISNLSFG*QVRLSLAQESL
Trigger: AAGGCTTTCCTGAGCAAGTGACAATCTAACCTGCCATCCAAATGATAAATTGCTAATTAAGCAAATGAGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGGGTGGCCGAACTCCTTaGCGCCCTGGTCGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLGGRTP*RPGRPV
Trigger: CACTGGGCGACCAGGGCGGCAAGGAGTTCGGCCACC...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTGCCGCCTCGCGGGCCTaGTACTCGGGCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFAASRA*YSGRLW
Trigger: CCACAGCCTGCCCGAGTACCAGGCCCGCGAGGCGGC...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGAGAAGTTGCGCGTACTaGGCGCCAGCAGGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLRSCAY*APAGGA
Trigger: CGCGCCTCCTGCTGGCGCCCAGTACGCGCAACTTCT...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGCGTGCAGGTGGCCAGTaGGGTAGAAGTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLRAGGQ*GRSAAG
Trigger: GCCTGCTGCACTTCTACCGCACTGGCCACCTGCACG...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTGCCGCCTCGCGGGCCTaGTACTCGGGCAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTAASRA*YSGRLW
Trigger: CCACAGCCTGCCCGAGTACCAGGCCCGCGAGGCGGC...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGCAAAGCCACCGAGGCTaGGAGCCGCTGGCTATACTC +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLQSHRG*EPLAIL
Trigger: GAGTATAGCCAGCGGCTCCCAGCCTCGGTGGCTTTG...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCTTGGATCTCCACCTGTaGTGGCACCTCCCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSLDLHL*WHLPGA
Trigger: GGCGCCCGGGAGGTGCCACCACAGGTGGAGATCCAA...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306117.5
CDS-3UTR CCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTAGCCCGGGTTCTCCATaGTCAGCCAGAGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFSPGSP*SARGGG
Trigger: GCCGCCGCCTCTGGCTGACCATGGAGAACCCGGGCT...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCACCACCTTGCCCAGGTaGCCGAACTCCTTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSTTLPR*PNSLPP
Trigger: GGGCGGCAAGGAGTTCGGCCACCTGGGCAAGGTGGT...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGGGCTCACTGGGGGCCTaGCTCTCTAGATCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLGSLGA*LSRSAD
Trigger: GTCTGCAGATCTAGAGAGCCAGGCCCCCAGTGAGCC...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGTCTACTGTAGGGGCATaGCAGGGGGTCACGGATCCC +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLSTVGA*QGVTDP
Trigger: GGGATCCGTGACCCCCTGCCATGCCCCTACAGTAGA...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTCTAGTCCCCCGCGGCTaGAGGCCGCATCGATCGCTG +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTLVPRG*RPHRSL
Trigger: CAGCGATCGATGCGGCCTTCAGCCGCGGGGGACTAG...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTCTAGTCCCCCGCGGCTaGAGGCCGCATCGATCGCTG +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFLVPRG*RPHRSL
Trigger: CAGCGATCGATGCGGCCTTCAGCCGCGGGGGACTAG...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGAGGCATATGTCCTCGTCCCAGGCGTaGGGCTGGGTCAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: ANTNTVPCPPSLPRERHMSSSQA*GWVSRL
Trigger: GAGGCGGCTGACCCAGCCGCACGCCTGGGACGAGGA...CATATGCCTCTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGCGGGCAGGCTGTGGATaGACATGGCGGCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFERAGCG*TWRRWR
Trigger: CCTCCATCGCCGCCATGTGCATCCACAGCCTGCCCG...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp CTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGAGCCCACGGTGGTCATaGTCACTGTGCCCCACCACC +
Preference number: 4 (lower is better)
Translates to: LRQHVREPSPYKQKHVLGSPRWS*SLCPTT
Trigger: GGTGGTGGGGCACAGTGAGCATGACCACCGTGGGCT...CCCCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGCTGTTGCGCACGGCTaGCTCCAGAGCCTTCTGGCG +
Preference number: 4 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWAVAHG*LQSLLA
Trigger: CGCCAGAAGGCTCTGGAGGCAGCCGTGCGCAACAGC...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGGATCTCCACCTGTGGTaGCACCTCCCGGGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARDLHLW*HLPGAS
Trigger: CGAGGCGCCCGGGAGGTGCCACCACAGGTGGAGATC...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306117.5
CDS-3UTR CCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTATCCCAGGCGTGCGGCTaGGTCAGCCGCCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLSQACG*VSRLSR
Trigger: CCTGGAGAGGCGGCTGACCCAGCCGCACGCCTGGGA...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTAGCCCGGGTTCTCCATaGTCAGCCAGAGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFSPGSP*SARGGG
Trigger: GCCGCCGCCTCTGGCTGACCATGGAGAACCCGGGCT...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGACCACCTTGCCCAGGTaGCCGAACTCCTTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWTTLPR*PNSLPP
Trigger: GGGCGGCAAGGAGTTCGGCCACCTGGGCAAGGTGGT...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGCATCAGCATCACCTGTaGTGGCACCTCCCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWHQHHL*WHLPGA
Trigger: GGCGCCCGGGAGGTGCCACCACAGGTGATGCTGATG...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTCGCGGAAGATGCGCATaGGGCGGAACACCTGCACCA +
Preference number: 4 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFRGRCA*GGTPAP
Trigger: TGGTGCAGGTGTTCCGCCTCATGCGCATCTTCCGCG...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTTGCAGGCGGCCCCGCTaGCCTCTCCTTCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTCRRPR*PLLPSS
Trigger: GGAAGAAGGAAGGAGAGGGCAGCGGGGCCGCCTGCA...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTCGGGCAGGCTGTGGATaGACATGGCGGCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTRAGCG*TWRRWR
Trigger: CCTCCATCGCCGCCATGTGCATCCACAGCCTGCCCG...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGGGTACAGCAGCAAGATaGCCACCTCACGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLGTAAR*PPHGSC
Trigger: ACAGCTACCGTGAGGTGGGCATCTTGCTGCTGTACC...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGAGCCCACGGTGGTCATaGTCACTGTGCCCCACCACC +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFESPRWS*SLCPTT
Trigger: GGTGGTGGGGCACAGTGAGCATGACCACCGTGGGCT...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGGCTGTTGCGCACGGCTaGCTCCAGAGCCTTCTGGCG +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARAVAHG*LQSLLA
Trigger: CGCCAGAAGGCTCTGGAGGCAGCCGTGCGCAACAGC...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGCAGCACAGTGCTGGGTaGTGTAGCCACAGTATGTGG +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLQHSAG*CSHSMW
Trigger: CCACATACTGTGGCTACAGCACCCAGCACTGTGCTG...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTGAGGCTGGGAGCCGCTaGCTATACTCGGTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFEAGSR*LYSVSP
Trigger: AGGCGAGACCGAGTATAGCCAGCGGCTCCCAGCCTC...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CCAACTGCCGCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGGGCTGTGGATGCACATaGCGGCGATGGAGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: PTAANTNTVPCPPSLPREGCGCT*RRWRRA
Trigger: TGCTCGCCTCCATCGCCGCCATGTGCATCCACAGCC...CTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGCGGCAGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGAGAAGTTGCGCGTACTaGGCGCCAGCAGGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARRSCAY*APAGGA
Trigger: CGCGCCTCCTGCTGGCGCCCAGTACGCGCAACTTCT...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CCAACTGCCGCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGCGCAGCCCGGTGGAATaGCGCGCCAACTTGAGTACG +
Preference number: 4 (lower is better)
Translates to: PTAANTNTVPCPPSLPRERSPVE*RANLST
Trigger: CGTACTCAAGTTGGCGCGCCATTCCACCGGGCTGCG...CTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGCGGCAGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCGGTGTGGAGGCTCACTaGGGGCCTGGCTCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSGVEAH*GPGSLD
Trigger: ATCTAGAGAGCCAGGCCCCCAGTGAGCCTCCACACC...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCTCTACTGTAGGGGCATaGCAGGGGGTCACGGATCCC +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSSTVGA*QGVTDP
Trigger: GGGATCCGTGACCCCCTGCCATGCCCCTACAGTAGA...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGCCAAGGTCAGACTGTTaGGGGAGGGTCTTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLPRSDC*GRVLEA
Trigger: GGCTTCTAAGACCCTCCCCCAACAGTCTGACCTTGG...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGCACCAGCCAGCAGCGTaGGATAGAAGGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWHQPAA*DRRAAQ
Trigger: CTGTGCTGCCCTTCTATCTCACGCTGCTGGCTGGTG...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGTCCTCGTCCCAGGCGTaGGGCTGGGTCAGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRSSSQA*GWVSRL
Trigger: GAGGCGGCTGACCCAGCCGCACGCCTGGGACGAGGA...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGCGCGCCAGTTCTCGCTaGACGTCGGAGATCTCGTCG +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARRASSR*TSEISS
Trigger: CGACGAGATCTCCGACGTGCAGCGAGAACTGGCGCG...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGCCTCTGGCTCATGCCTaGTTCATGAATGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLPLAHA*FMNGLE
Trigger: CTCCAAGCCATTCATGAAGCAGGCATGAGCCAGAGG...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGTCCCAGGCGTGCGGCTaGGTCAGCCGCCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRSQACG*VSRLSR
Trigger: CCTGGAGAGGCGGCTGACCCAGCCGCACGCCTGGGA...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTGGCTGTGGATGCACATaGCGGCGATGGAGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFGCGCT*RRWRRA
Trigger: TGCTCGCCTCCATCGCCGCCATGTGCATCCACAGCC...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGTACTCGGGCAGGCTGTaGATGCACATGGCGGCGATG +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFEYSGRL*MHMAAM
Trigger: CATCGCCGCCATGTGCATCCACAGCCTGCCCGAGTA...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTCGCAGCCCGGTGGAATaGCGCGCCAACTTGAGTACG +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFRSPVE*RANLST
Trigger: CGTACTCAAGTTGGCGCGCCATTCCACCGGGCTGCG...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGTCCTCAAACTCTTGGTaGTTGCTGTTGCGCACGGCT +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLSSNSW*LLLRTA
Trigger: AGCCGTGCGCAACAGCAACCACCAAGAGTTTGAGGA...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCAGAGGGGCTGGAATCTaGACTTGGGGGCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSRGAGI*TWGQGL
Trigger: CAATCCCTGCCCCCAAGTCCAGATTCCAGCCCCTCT...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGAGAGGGGCTGGAATCTaGACTTGGGGGCAGGGATTG +
Preference number: 4 (lower is better)
Translates to: LRQHVREPSPYKQKHVLGRGAGI*TWGQGL
Trigger: CAATCCCTGCCCCCAAGTCCAGATTCCAGCCCCTCT...CCCCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGGAGGACTCTCACACATaGGCCTGGATGGGTACTCTA +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLEDSHT*AWMGTL
Trigger: TAGAGTACCCATCCAGGCCCATGTGTGAGAGTCCTC...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATTGCCCACCCTCTCCAATCAGCATCACCTGTGGTaGCACCTCCCGGGCGCCTCG +
Preference number: 4 (lower is better)
Translates to: EPENVDSKSFHILPTLSNQHHLW*HLPGAS
Trigger: CGAGGCGCCCGGGAGGTGCCACCACAGGTGATGCTG...ATTGGAGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGGAAGAAAGATGGAGTTaGTGGAGCATTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLEERWS*WSIAPG
Trigger: GCCTGGAGCAATGCTCCATCAACTCCATCTTTCTTC...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGTACACGCAGCCCTTCTaGTCTGCCCCTAACCTGGGT +
Preference number: 4 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWYTQPF*SAPNLG
Trigger: ACCCAGGTTAGGGGCAGATCAGAAGGGCTGCGTGTA...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGGGCACGGGTCCACGCTaGTCGGCGTGTCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRGTGPR*SACRCP
Trigger: AGGACAGCGACACGCCGAGCAGCGTGGACCCGTGCC...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTACACCTGCACCACCTTaGCCAGGTGGCCGAACTCCT +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFTPAPP*PGGRTP
Trigger: AGGAGTTCGGCCACCTGGGCAAGGTGGTGCAGGTGT...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGACACCTGCACCACCTTaGCCAGGTGGCCGAACTCCT +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARTPAPP*PGGRTP
Trigger: AGGAGTTCGGCCACCTGGGCAAGGTGGTGCAGGTGT...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGGTGCTACCACCAGGATaGCCCCTAGGATGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARVLPPG*PLGCSL
Trigger: CAGGCTGCATCCTAGGGGGCATCCTGGTGGTAGCAC...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTCTTGGTGGTTGCTGTTaGGCACGGCTGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFLGGCC*ARLPPE
Trigger: CTCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAG...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTCTTGGTGGTTGCTGTTaGGCACGGCTGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTLGGCC*ARLPPE
Trigger: CTCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAG...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp CTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGGAGACCCAGAATCCATaGGTATGTAGGGGGCCCACT +
Preference number: 4 (lower is better)
Translates to: LRQHVREPSPYKQKHVLGETQNP*VCRGPT
Trigger: AGTGGGCCCCCTACATACGCATGGATTCTGGGTCTC...CCCCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTCAAAGCCACCGAGGCTaGGAGCCGCTGGCTATACTC +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTQSHRG*EPLAIL
Trigger: GAGTATAGCCAGCGGCTCCCAGCCTCGGTGGCTTTG...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGCCACCACCAGCAGGCTaGGATGGTGTTAAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFEPPPAG*DGVKAH
Trigger: GTGGGCTTTAACACCATCCCAGCCTGCTGGTGGTGG...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAGCCAGCCACCGTCACTaGCACCACATCCCCATAGCC +
Preference number: 4 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLASHRH*HHIPIA
Trigger: GGCTATGGGGATGTGGTGCCAGTGACGGTGGCTGGC...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGATACATCTGAGGGTGTaGAGGCTCACTGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFEIHLRV*RLTGGL
Trigger: CAGGCCCCCAGTGAGCCTCCACACCCTCAGATGTAT...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGTGTGGAAAGGGCTACTaGATCCCCTCCTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLCGKGY*IPSSDF
Trigger: AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACA...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGAGCCGTCGGGTTTCTTaGTGTGTTCTGCAAGACCAT +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLSRRVS*CVLQDH
Trigger: ATGGTCTTGCAGAACACACCAAGAAACCCGACGGCT...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTGCAGACTGTCCCTCCTaGGAGGTTTCTCGGGATGTC +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFADCPS*EVSRDV
Trigger: GACATCCCGAGAAACCTCTCAGGAGGGACAGTCTGC...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCCTCATGCCTGCTTCATaGATGGCTTGGAGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSLMPAS*MAWRQV
Trigger: AACCTGCCTCCAAGCCATTCATGAAGCAGGCATGAG...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCCTGGATCCCCTCCTCTaGCTTTCTCAGCAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSLDPLL*LSQQVK
Trigger: CTTCACTTGCTGAGAAAGTCAGAGGAGGGGATCCAG...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTACAGGGCAGGCGGAGCTaGACGGACCTCCTTTTCAGT +
Preference number: 4 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLQGRRS*TDLLFS
Trigger: ACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCCTG...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGGGTGGCCGAACTCCTTaGCGCCCTGGTCGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELGGRTP*RPGRPV
Trigger: CACTGGGCGACCAGGGCGGCAAGGAGTTCGGCCACC...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTGGTACAGCAGCAAGATaGCCACCTCACGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFGTAAR*PPHGSC
Trigger: ACAGCTACCGTGAGGTGGGCATCTTGCTGCTGTACC...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGCAGCACAGTGCTGGGTaGTGTAGCCACAGTATGTGG +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFEQHSAG*CSHSMW
Trigger: CCACATACTGTGGCTACAGCACCCAGCACTGTGCTG...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTGAGGCTGGGAGCCGCTaGCTATACTCGGTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFEAGSR*LYSVSP
Trigger: AGGCGAGACCGAGTATAGCCAGCGGCTCCCAGCCTC...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGCCACCACCAGCAGGCTaGGATGGTGTTAAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARPPPAG*DGVKAH
Trigger: GTGGGCTTTAACACCATCCCAGCCTGCTGGTGGTGG...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTGCCAGCCACCGTCACTaGCACCACATCCCCATAGCC +
Preference number: 4 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFASHRH*HHIPIA
Trigger: GGCTATGGGGATGTGGTGCCAGTGACGGTGGCTGGC...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAGGCTCACTGGGGGCCTaGCTCTCTAGATCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLGSLGA*LSRSAD
Trigger: GTCTGCAGATCTAGAGAGCCAGGCCCCCAGTGAGCC...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CAAGAATGGTGGCAGCCACCACAAACTAGAAGAGAAAAGGAGAGGGTTTCCCCCATACATCTGAGGGTGTaGAGGCTCACTGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QEWWQPPQTRREKERVSPIHLRV*RLTGGL
Trigger: CAGGCCCCCAGTGAGCCTCCACACCCTCAGATGTAT...GGGGGAAACCCTCTCCTTTTCTCTTCTAGTTTGTGGTGGCTGCCACCATTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp CTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGCTCTCACATCAGCCCTaGGAGGAAGGTCGGAAGATT +
Preference number: 4 (lower is better)
Translates to: LRQHVREPSPYKQKHVLGLSHQP*EEGRKI
Trigger: AATCTTCCGACCTTCCTCCCAGGGCTGATGTGAGAG...CCCCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGCTTGGGGGCAGGGATTaGACCACTTTACACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFELGGRD*TTLHSR
Trigger: CCTGCTGTGTAAAGTGGTCCAATCCCTGCCCCCAAG...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCTCTCACACATGGGCCTaGATGGGTACTCTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSSHTWA*MGTLGR
Trigger: CCTACCTAGAGTACCCATCCAGGCCCATGTGTGAGA...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGGATCTGCCCCTAACCTaGGTTCAGCTGGGCCTAGAT +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFEDLPLT*VQLGLD
Trigger: ATCTAGGCCCAGCTGAACCCAGGTTAGGGGCAGATC...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTTCAGGACAGCATGAGTaGTCCTGGGAGGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTSGQHE*SWEAHY
Trigger: GTAGTGAGCCTCCCAGGATCACTCATGCTGTCCTGA...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTTTTCTCAGGACAGCATaGGTGATCCTGGGAGGCTCA +
Preference number: 4 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFFLRTA*VILGGS
Trigger: TGAGCCTCCCAGGATCACTCATGCTGTCCTGAGAAA...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAGGCTGGACGTCTGTGTaGTGGGCAGAAAGGAACTGC +
Preference number: 4 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLGWTSV*WAERNC
Trigger: GCAGTTCCTTTCTGCCCATCACACAGACGTCCAGCC...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGTTCAGCAGGTGGGTATaGGAGATATGCCCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFEFSRWV*EICPQQ
Trigger: TTGCTGGGGGCATATCTCTCATACCCACCTGCTGAA...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCTTGTTCACACCTTTTTaGGGGCCAGGTCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSLFTPF*GPGLSL
Trigger: CAGAGAGAGACCTGGCCCTCAAAAAGGTGTGAACAA...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTACACTATGGGGAACCTaGGAGTGCATGCCTCACGCA +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFTLWGT*ECMPHA
Trigger: TGCGTGAGGCATGCACTCTCAGGTTCCCCATAGTGT...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGCATTCCTGTATTTCCTaGGGCCTCGTCAGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWHSCIS*GLVSQL
Trigger: GAGCTGACTGACGAGGCCTCAGGAAATACAGGAATG...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTATGAGGCGGAACACCTaGACCACCTTGCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIAMRRNT*TTLPRW
Trigger: CCACCTGGGCAAGGTGGTGCAGGTGTTCCGCCTCAT...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCGAGTTGATGGAGCATTaGTCCAGGCACACCAACAAG +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSELMEH*SRHTNK
Trigger: CTTGTTGGTGTGCCTGGAGCAATGCTCCATCAACTC...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTGAGACCCAGAATCCATaGGTATGTAGGGGGCCCACT +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFETQNP*VCRGPT
Trigger: AGTGGGCCCCCTACATACGCATGGATTCTGGGTCTC...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGAGGGAGGCCCTTTGCTaGTTAGCTCCATCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFEREALC*LAPSSV
Trigger: AACAGAGGATGGAGCTAAGCAGCAAAGGGCCTCCCT...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCCGGCAGCATGGTCCCTaGCACATAATCAATGCACAA +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSRQHGP*HIINAQ
Trigger: TTGTGCATTGATTATGTGCCAGGGACCATGCTGCCG...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306117.5
CDS-3UTR CCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCAAGTCCTCAAACTCTTaGTGGTTGCTGTTGCGCACG +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSKSSNS*WLLLRT
Trigger: CGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTT...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGAAGTCCTCAAACTCTTaGTGGTTGCTGTTGCGCACG +
Preference number: 4 (lower is better)
Translates to: LRQHVREPSPYKQKHVLGKSSNS*WLLLRT
Trigger: CGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTT...CCCCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGCCTGTCCTGGGCCTTTaGAGGAAGGAATGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFEPVLGL*RKECSF
Trigger: AAAGCTGCATTCCTTCCTCCAAAGGCCCAGGACAGG...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGATTGCTGACTCCTGTTaGATGCTCCTAGAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLIADSC*MLLERN
Trigger: GTTCCTTTCTAGGAGCATCCAACAGGAGTCAGCAAT...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTCCAAGGTCAGACTGTTaGGGGAGGGTCTTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTPRSDC*GRVLEA
Trigger: GGCTTCTAAGACCCTCCCCCAACAGTCTGACCTTGG...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTTCTCACACATGGGCCTaGATGGGTACTCTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFSHTWA*MGTLGR
Trigger: CCTACCTAGAGTACCCATCCAGGCCCATGTGTGAGA...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCGCCAGTATATCAGAGTaGCTGGGCATAACACAACGG +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSASISE*LGITQR
Trigger: CCGTTGTGTTATGCCCAGCCACTCTGATATACTGGC...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTGAGAGGGTTTCCCCCTaGAGTCTCCAGAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIAERVSP*SLQREG
Trigger: ACCCTCCCTCTGGAGACTCCAGGGGGAAACCCTCTC...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGAGTCAGCTCTTCCTTTaGTCGGGTGAATTTCACAGA +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLSQLFL*SGEFHR
Trigger: TCTGTGAAATTCACCCGACCAAAGGAAGAGCTGACT...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR CAA 72 bp CCCAGGACTCATCCTCCTTCCCTCCAGGACTCATCTTaGATTGCTGACTCCTGTTGGATGCTCCTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PRTHPPSLQDSS*IADSCWMLLER
Trigger: CCTTTCTAGGAGCATCCAACAGGAGTCAGCAATCAAAGATGAGTCCTGGAGGGAAGGAGGATGAGTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CAA 72 bp GGCTGGTATGTGTGTGGTGAATTCAAGGGAGGCCCTTaGCTGCTTAGCTCCATCCTCTGTTCCAATCTGGAG +
Preference number: 4 (lower is better)
Translates to: GWYVCGEFKGGP*LLSSILCSNLE
Trigger: CTCCAGATTGGAACAGAGGATGGAGCTAAGCAGCAAAGGGCCTCCCTTGAATTCACCACACACATACCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTCGCGGAAGATGCGCATaGGGCGGAACACCTGCACCA +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLRGRCA*GGTPAP
Trigger: TGGTGCAGGTGTTCCGCCTCATGCGCATCTTCCGCG...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTGGAGGCTCACTACCATaGAGAACTTTAGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFGGSLP*RTLAGE
Trigger: CTCCCCTGCTAAAGTTCTTCATGGTAGTGAGCCTCC...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTATCAGGACAGCATGAGTaGTCCTGGGAGGCTCACTAC +
Preference number: 4 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLSGQHE*SWEAHY
Trigger: GTAGTGAGCCTCCCAGGATCACTCATGCTGTCCTGA...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTCAGATTCTGACCATTTaGCAGAGGGGCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFQILTI*QRGWNL
Trigger: CAGATTCCAGCCCCTCTGTCAAATGGTCAGAATCTG...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTCTGGGTCACAGATTCTaGCCATTTGACAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTLGHRF*PFDRGA
Trigger: AGCCCCTCTGTCAAATGGTCAGAATCTGTGACCCAG...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTCTGGATCCCCTCCTCTaGCTTTCTCAGCAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFLDPLL*LSQQVK
Trigger: CTTCACTTGCTGAGAAAGTCAGAGGAGGGGATCCAG...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTTACACGCAGCCCTTCTaGTCTGCCCCTAACCTGGGT +
Preference number: 4 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIAYTQPF*SAPNLG
Trigger: ACCCAGGTTAGGGGCAGATCAGAAGGGCTGCGTGTA...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp CATCTTGATTTTGGATTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGGCACGGGTCCACGCTaGTCGGCGTGTCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: HLDFGFLASRTVREYTSTGTGPR*SACRCP
Trigger: AGGACAGCGACACGCCGAGCAGCGTGGACCCGTGCC...AGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAATCCAAAATCAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGCGCGCCAGTTCTCGCTaGACGTCGGAGATCTCGTCG +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELRASSR*TSEISS
Trigger: CGACGAGATCTCCGACGTGCAGCGAGAACTGGCGCG...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGCCGACACCCCATCAATaGTGCTCAGCAAGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARPTPHQ*CSASPQ
Trigger: TTGAGGACTTGCTGAGCAGCATTGATGGGGTGTCGG...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTGGATGTCTCCAGAGATaGCTCCGACACCCCATCAAT +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTGCLQR*LRHPIN
Trigger: ATTGATGGGGTGTCGGAGGCATCTCTGGAGACATCC...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGCCTCCCTCTGGCTCATaGCTGCTTCATGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARPPSGS*LLHEWL
Trigger: AAGCCATTCATGAAGCAGGCATGAGCCAGAGGGAGG...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTAAGCCGAAACATGACTaGAGGCCACACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTKPKHD*RPHMKP
Trigger: GGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTT...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp CCAACTGCCGCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGGAACCTGAGAGTGCATaGCTCACGCAAAGGCATTCA +
Preference number: 4 (lower is better)
Translates to: PTAANTNTVPCPPSLPREEPESA*LTQRHS
Trigger: TGAATGCCTTTGCGTGAGGCATGCACTCTCAGGTTC...CTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGCGGCAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGTTTCTTGGTGTGTTCTaGAAGACCATAAGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLFLGVF*KTIRVL
Trigger: TAGCACCCTTATGGTCTTGCAGAACACACCAAGAAA...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCGAGTTGTTGCTTTTCTaGCAGGACCACAAACAGCCT +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSELLLF*QDHKQP
Trigger: AGGCTGTTTGTGGTCCTGGCAGAAAAGCAACAACTC...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTAGGGGAGCGAGTTGTTaGTTTTCTGCCAGGACCACA +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTRGASC*FSARTT
Trigger: TGTGGTCCTGGCAGAAAAGCAACAACTCGCTCCCCT...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGGCTCCCACCTCCACTTaGATCTCCACCTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRAPTST*ISTCGG
Trigger: GCCACCACAGGTGGAGATCCAAGTGGAGGTGGGAGC...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306117.5
CDS-3UTR CCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGATGAGGTTGAGCGGGTaGCAGAAGAAGTTGCGCGTA +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARMRLSG*QKKLRV
Trigger: TACGCGCAACTTCTTCTGCCACCCGCTCAACCTCAT...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTATGAGGTTGAGCGGGTaGCAGAAGAAGTTGCGCGTA +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFMRLSG*QKKLRV
Trigger: TACGCGCAACTTCTTCTGCCACCCGCTCAACCTCAT...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGGGTGTGGAGGCTCACTaGGGGCCTGGCTCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRGVEAH*GPGSLD
Trigger: ATCTAGAGAGCCAGGCCCCCAGTGAGCCTCCACACC...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTCCTGTCCTGGGCCTTTaGAGGAAGGAATGCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTPVLGL*RKECSF
Trigger: AAAGCTGCATTCCTTCCTCCAAAGGCCCAGGACAGG...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGCTCTCACATCAGCCCTaGGAGGAAGGTCGGAAGATT +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARLSHQP*EEGRKI
Trigger: AATCTTCCGACCTTCCTCCCAGGGCTGATGTGAGAG...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGTGTGGAAAGGGCTACTaGATCCCCTCCTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFECGKGY*IPSSDF
Trigger: AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACA...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCAATCAGACTCTCTCCTaGGATTGGAACTGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSNQTLS*DWNCEQ
Trigger: CTGCTCACAGTTCCAATCCCAGGAGAGAGTCTGATT...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGCACCAGCCAGCAGCGTaGGATAGAAGGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELHQPAA*DRRAAQ
Trigger: CTGTGCTGCCCTTCTATCTCACGCTGCTGGCTGGTG...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGGCAGACTGTCCCTCCTaGGAGGTTTCTCGGGATGTC +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRADCPS*EVSRDV
Trigger: GACATCCCGAGAAACCTCTCAGGAGGGACAGTCTGC...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGTCCAGGACTCATCTTTaGTTGCTGACTCCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFESRTHL*LLTPVG
Trigger: TCCAACAGGAGTCAGCAATCAAAGATGAGTCCTGGA...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTCAGATTCTGACCATTTaGCAGAGGGGCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTQILTI*QRGWNL
Trigger: CAGATTCCAGCCCCTCTGTCAAATGGTCAGAATCTG...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTTTGTTCACACCTTTTTaGGGGCCAGGTCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFLFTPF*GPGLSL
Trigger: CAGAGAGAGACCTGGCCCTCAAAAAGGTGTGAACAA...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTACTAGGCCCTGTGTATaGCACACACCTTCACACATG +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTTRPCV*HTPSHM
Trigger: CATGTGTGAAGGTGTGTGTCATACACAGGGCCTAGT...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGACTAGGCCCTGTGTATaGCACACACCTTCACACATG +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARTRPCV*HTPSHM
Trigger: CATGTGTGAAGGTGTGTGTCATACACAGGGCCTAGT...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GAAATCAGACTCTCTCCTGGGATTGGAACTGTGAGCAGGATGATACAGGGAAGGTCCAGGACTGGAGCCTaGGAATGTGGATTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: EIRLSPGIGTVSRMIQGRSRTGA*ECGFQV
Trigger: GACTTGGAATCCACATTCTCAGGCTCCAGTCCTGGA...CCTTCCCTGTATCATCCTGCTCACAGTTCCAATCCCAGGAGAGAGTCTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp TTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGTTTTAAGCCATCAATGCAGGCGGCCCCGCTaGCCTCTCCTTCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLASRTVREYTSTVLSHQCRRPR*PLLPSS
Trigger: GGAAGAAGGAAGGAGAGGGCAGCGGGGCCGCCTGCA...TTGATGGCTTAAAACAGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTGTGCTACCACCAGGATaGCCCCTAGGATGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLVLPPG*PLGCSL
Trigger: CAGGCTGCATCCTAGGGGGCATCCTGGTGGTAGCAC...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATTGCCCACCCTCTCCAATCAAACTCTTGGTGGTTaGTGTTGCGCACGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: EPENVDSKSFHILPTLSNQTLGG*CCARLP
Trigger: AGGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTG...ATTGGAGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTGAACCTGAGAGTGCATaGCTCACGCAAAGGCATTCA +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTEPESA*LTQRHS
Trigger: TGAATGCCTTTGCGTGAGGCATGCACTCTCAGGTTC...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTGTAAGGAGCAGAGTGTaGAGAAGGGCTGGTATGTGT +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTVRSRV*RRAGMC
Trigger: ACACATACCAGCCCTTCTGCACACTCTGCTCCTTAC...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAAGGGGAGCGAGTTGTTaGTTTTCTGCCAGGACCACA +
Preference number: 4 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLRGASC*FSARTT
Trigger: TGTGGTCCTGGCAGAAAAGCAACAACTCGCTCCCCT...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp CAAGAATGGTGGCAGCCACCACAAACTAGAAGAGAAAAGGAGAGGGTTTCCCCCACTAATACGGTACCTTaGCCTCCATCCCTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: QEWWQPPQTRREKERVSPTNTVP*PPSLPR
Trigger: TCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGT...GGGGGAAACCCTCTCCTTTTCTCTTCTAGTTTGTGGTGGCTGCCACCATTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGTACTCGGGCAGGCTGTaGATGCACATGGCGGCGATG +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELYSGRL*MHMAAM
Trigger: CATCGCCGCCATGTGCATCCACAGCCTGCCCGAGTA...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GAAATCAGACTCTCTCCTGGGATTGGAACTGTGAGCAGGATGATACAGGGAAGGTCCTCAAACTCTTGGTaGTTGCTGTTGCGCACGGCT +
Preference number: 4 (lower is better)
Translates to: EIRLSPGIGTVSRMIQGRSSNSW*LLLRTA
Trigger: AGCCGTGCGCAACAGCAACCACCAAGAGTTTGAGGA...CCTTCCCTGTATCATCCTGCTCACAGTTCCAATCCCAGGAGAGAGTCTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GAAATCAGACTCTCTCCTGGGATTGGAACTGTGAGCAGGATGATACAGGGAAGGAGCACTGTCCTGTCCTaGGCCTTTGGAGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: EIRLSPGIGTVSRMIQGRSTVLS*AFGGRN
Trigger: ATTCCTTCCTCCAAAGGCCCAGGACAGGACAGTGCT...CCTTCCCTGTATCATCCTGCTCACAGTTCCAATCCCAGGAGAGAGTCTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTAGGCCAAACATGACCTaGTTCATGTACAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFRPNMT*FMYRRC
Trigger: GCACCTCCTGTACATGAACCAGGTCATGTTTGGCCT...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTCTTGGGGGCAGGGATTaGACCACTTTACACAGCAGG +
Preference number: 4 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFLGGRD*TTLHSR
Trigger: CCTGCTGTGTAAAGTGGTCCAATCCCTGCCCCCAAG...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGTGTAGCCACAGTATGTaGAAAGGGCTACTGGATCCC +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARCSHSM*KGLLDP
Trigger: GGGATCCAGTAGCCCTTTCCACATACTGTGGCTACA...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTTGTAGCCACAGTATGTaGAAAGGGCTACTGGATCCC +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFCSHSM*KGLLDP
Trigger: GGGATCCAGTAGCCCTTTCCACATACTGTGGCTACA...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTTCCTCTGTTCCAATCTaGAGACCCAGAATCCATGCG +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFSSVPI*RPRIHA
Trigger: CGCATGGATTCTGGGTCTCCAGATTGGAACAGAGGA...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTGATCTGCCCCTAACCTaGGTTCAGCTGGGCCTAGAT +
Preference number: 4 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFDLPLT*VQLGLD
Trigger: ATCTAGGCCCAGCTGAACCCAGGTTAGGGGCAGATC...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTGGGAAGGAAGTTGACTaGAGGCAGATCATGTGGGTA +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFGKEVD*RQIMWV
Trigger: TACCCACATGATCTGCCTCCAGTCAACTTCCTTCCC...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTCTCATGCCTGCTTCATaGATGGCTTGGAGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIALMPAS*MAWRQV
Trigger: AACCTGCCTCCAAGCCATTCATGAAGCAGGCATGAG...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGACCCTTCCCTGGCTCTaGAAGGGATTTCTTATCTTG +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARTLPWL*KGFLIL
Trigger: CAAGATAAGAAATCCCTTTCAGAGCCAGGGAAGGGT...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTGACTTTCTCAGCAAGTaGAGAGAAGATTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFDFLSK*REDSAG
Trigger: ACCTGCTGAATCTTCTCTTCACTTGCTGAGAAAGTC...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGCGGGTATTTGTTGAGTaGGTGAGTGAAGAACCTACA +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFERVFVE*VSEEPT
Trigger: TGTAGGTTCTTCACTCACTCACTCAACAAATACCCG...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTACTGCAGGCCACACATaGAGCCCCAGTTTAAGACTC +
Preference number: 4 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIATAGHT*SPSLRL
Trigger: GAGTCTTAAACTGGGGCTTCATGTGTGGCCTGCAGT...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGAGGCATATGGCCCTGCTGACATCTTaGTTTTGGATTTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ANTNTVPCPPSLPRERHMALLTS*FWISGL
Trigger: GAGGCCAGAAATCCAAAATCAAGATGTCAGCAGGGC...CATATGCCTCTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp GAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATTGCCCACCCTCTCCAATTCACAAAGGTTTCAGTaGTCCTCCCTCCTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: EPENVDSKSFHILPTLSNSQRFQ*SSLLGV
Trigger: CACCCCTAGGAGGGAGGAGCACTGAAACCTTTGTGA...ATTGGAGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTACACCCCATCAATGCTaGTCAGCAAGTCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFTPHQC*SASPQT
Trigger: AGTTTGAGGACTTGCTGAGCAGCATTGATGGGGTGT...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTCCTCCCTCTGGCTCATaGCTGCTTCATGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFPPSGS*LLHEWL
Trigger: AAGCCATTCATGAAGCAGGCATGAGCCAGAGGGAGG...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp GCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGAGGCATATGCTCCTTGGCTTTCATTaGCCTCTGGGTCACAGATTC +
Preference number: 4 (lower is better)
Translates to: ANTNTVPCPPSLPRERHMLLGFH*PLGHRF
Trigger: GAATCTGTGACCCAGAGGGCAATGAAAGCCAAGGAG...CATATGCCTCTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGGAGTTGTTGCTTTTCTaGCAGGACCACAAACAGCCT +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARELLLF*QDHKQP
Trigger: AGGCTGTTTGTGGTCCTGGCAGAAAAGCAACAACTC...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGTGCCTGCTTCATGAATaGCTTGGAGGCAGGTTTATA +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFECLLHE*LGGRFI
Trigger: TATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCA...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGGGATTTCTTATCTTGTaGATCAACTCTGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: LRQHVREPSPYKQKHVLGGFLIL*INSGDP
Trigger: TGGATCCCCAGAGTTGATCCACAAGATAAGAAATCC...CCCCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGGCTTTCATTGCCCTCTaGGTCACAGATTCTGACCAT +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARAFIAL*VTDSDH
Trigger: ATGGTCAGAATCTGTGACCCAGAGGGCAATGAAAGC...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATTGCCCACCCTCTCCAATGAGGACTCTCACACATaGGCCTGGATGGGTACTCTA +
Preference number: 4 (lower is better)
Translates to: EPENVDSKSFHILPTLSNEDSHT*AWMGTL
Trigger: TAGAGTACCCATCCAGGCCCATGTGTGAGAGTCCTC...ATTGGAGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGAGGCATATGAGCCGTCGGGTTTCTTaGTGTGTTCTGCAAGACCAT +
Preference number: 4 (lower is better)
Translates to: ANTNTVPCPPSLPRERHMSRRVS*CVLQDH
Trigger: ATGGTCTTGCAGAACACACCAAGAAACCCGACGGCT...CATATGCCTCTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTGTTTTCACTGATACATaGGAAGGGGAGCGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFVFTDT*EGERVV
Trigger: AACAACTCGCTCCCCTTCCCATGTATCAGTGAAAAC...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGGCTCAGAGAATTAAATaGTGCAAGGTGTTTATCGGC +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFEAQRIK*CKVFIG
Trigger: GCCGATAAACACCTTGCATCATTTAATTCTCTGAGC...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306117.5
CDS-3UTR TCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGACGACACCTCGAAGCTaGACCAGGCGATGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELTTPRS*TRRCRS
Trigger: ACTTCTGCATCGCCTGGTTCAGCTTCGAGGTGTCGT...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGGGAGGCTCACTACCATaGAGAACTTTAGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRGGSLP*RTLAGE
Trigger: CTCCCCTGCTAAAGTTCTTCATGGTAGTGAGCCTCC...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGCAGATGATTCCCTCTTaGGCTTTCTCCACATCAGTA +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARQMIPS*AFSTSV
Trigger: TACTGATGTGGAGAAAGCTCAAGAGGGAATCATCTG...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTGGAGGGTGGCCCTGCTaGCATCTTGATTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIAGGWPC*HLDFGF
Trigger: AAATCCAAAATCAAGATGTCAGCAGGGCCACCCTCC...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp GCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGAGGCATATGACACAGACACTGAAGTaGGATCAGAGGCAGAGACTT +
Preference number: 4 (lower is better)
Translates to: ANTNTVPCPPSLPRERHMTQTLK*DQRQRL
Trigger: AAGTCTCTGCCTCTGATCTCACTTCAGTGTCTGTGT...CATATGCCTCTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp TTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGTTTTAAGCCATCAAATGAGGCGGAACACCTaGACCACCTTGCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FLASRTVREYTSTVLSHQMRRNT*TTLPRW
Trigger: CCACCTGGGCAAGGTGGTGCAGGTGTTCCGCCTCAT...TTGATGGCTTAAAACAGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTCAAACTCTTGGTGGTTaGTGTTGCGCACGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLQTLGG*CCARLP
Trigger: AGGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTG...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp CAAGAATGGTGGCAGCCACCACAAACTAGAAGAGAAAAGGAGAGGGTTTCCCCCAAGAGGCAAGTACAATaGTATGGTACTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QEWWQPPQTRREKERVSPKRQVQ*YGTSSQ
Trigger: CTGGGAGGAAGTACCATAGCATTGTACTTGCCTCTT...GGGGGAAACCCTCTCCTTTTCTCTTCTAGTTTGTGGTGGCTGCCACCATTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTACCAAATACCTACTCTaGACCAAGCCCAGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFTKYLL*TKPRVQ
Trigger: TTGAACTCTGGGCTTGGTGCAGAGTAGGTATTTGGT...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGAAGCCGAAACATGACTaGAGGCCACACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRKPKHD*RPHMKP
Trigger: GGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTT...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGAGGGAGGCCCTTTGCTaGTTAGCTCCATCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRREALC*LAPSSV
Trigger: AACAGAGGATGGAGCTAAGCAGCAAAGGGCCTCCCT...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTGGATTTCTTATCTTGTaGATCAACTCTGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFGFLIL*INSGDP
Trigger: TGGATCCCCAGAGTTGATCCACAAGATAAGAAATCC...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAGCAAGTACAATGCTATaGTACTTCCTCCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLASTML*YFLPGL
Trigger: GAGTCCTGGGAGGAAGTACCATAGCATTGTACTTGC...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTGCCAGTATATCAGAGTaGCTGGGCATAACACAACGG +
Preference number: 4 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIAASISE*LGITQR
Trigger: CCGTTGTGTTATGCCCAGCCACTCTGATATACTGGC...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CAA 72 bp TGTGATGGGCAGAAAGGAACTGCCAAGGTCAGACTGTaGGGGGAGGGTCTTAGAAGCCAGTATTCATATATG +
Preference number: 4 (lower is better)
Translates to: CDGQKGTAKVRL*GEGLRSQYSYM
Trigger: CATATATGAATACTGGCTTCTAAGACCCTCCCCCAACAGTCTGACCTTGGCAGTTCCTTTCTGCCCATCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CAA 72 bp GAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATaGCCCACCCTCTCCAATCACTCAGACAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: EPENVDSKSFHI*PTLSNHSDSMS
Trigger: TGACATGCTGTCTGAGTGATTGGAGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTCTCATCTTTGATTGCTaGCTCCTGTTGGATGCTCCT +
Preference number: 4 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFLIFDC*LLLDAP
Trigger: AGGAGCATCCAACAGGAGTCAGCAATCAAAGATGAG...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTTCCAGGACTCATCTTTaGTTGCTGACTCCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFSRTHL*LLTPVG
Trigger: TCCAACAGGAGTCAGCAATCAAAGATGAGTCCTGGA...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTCTGGGTCACAGATTCTaGCCATTTGACAGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLLGHRF*PFDRGA
Trigger: AGCCCCTCTGTCAAATGGTCAGAATCTGTGACCCAG...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTTTCAGCAGGTGGGTATaGGAGATATGCCCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLFSRWV*EICPQQ
Trigger: TTGCTGGGGGCATATCTCTCATACCCACCTGCTGAA...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGTATTTGTTGAGTGAGTaGGTGAAGAACCTACAAGGA +
Preference number: 4 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWYLLSE*VKNLQG
Trigger: TCCTTGTAGGTTCTTCACTCACTCACTCAACAAATA...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTACTGCAGGCCACACATaGAGCCCCAGTTTAAGACTC +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLTAGHT*SPSLRL
Trigger: GAGTCTTAAACTGGGGCTTCATGTGTGGCCTGCAGT...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTACAGATGATTCCCTCTTaGGCTTTCTCCACATCAGTA +
Preference number: 4 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLQMIPS*AFSTSV
Trigger: TACTGATGTGGAGAAAGCTCAAGAGGGAATCATCTG...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTCTTCCTTTGGTCGGGTaGATTTCACAGATACCCTTC +
Preference number: 4 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFLPLVG*ISQIPF
Trigger: GAAGGGTATCTGTGAAATTCACCCGACCAAAGGAAG...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTTCACAAAGGTTTCAGTaGTCCTCCCTCCTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLSQRFQ*SSLLGV
Trigger: CACCCCTAGGAGGGAGGAGCACTGAAACCTTTGTGA...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGCCGACACCCCATCAATaGTGCTCAGCAAGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELPTPHQ*CSASPQ
Trigger: TTGAGGACTTGCTGAGCAGCATTGATGGGGTGTCGG...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGGGATGTCTCCAGAGATaGCTCCGACACCCCATCAAT +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELGCLQR*LRHPIN
Trigger: ATTGATGGGGTGTCGGAGGCATCTCTGGAGACATCC...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGGAGTTGATGGAGCATTaGTCCAGGCACACCAACAAG +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRELMEH*SRHTNK
Trigger: CTTGTTGGTGTGCCTGGAGCAATGCTCCATCAACTC...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGTTGCTTAGCAAATCTTaGATACCAGCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GQAELNGPPFQSCSHLFELLSKS*IPAKEA
Trigger: TGCCTCTTTAGCTGGTATGCAAGATTTGCTAAGCAA...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTACACACCTTCACACATaGCATTCTCTCTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIATHLHT*HSLCLE
Trigger: CTCCAAGCAGAGAGAATGGCATGTGTGAAGGTGTGT...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGGTAAGGAGCAGAGTGTaGAGAAGGGCTGGTATGTGT +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRVRSRV*RRAGMC
Trigger: ACACATACCAGCCCTTCTGCACACTCTGCTCCTTAC...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGATTCGTCGCCCTCTCTaGGCTTGTTTCCCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELIRRPL*ACFPVC
Trigger: ACAGACAGGGAAACAAGCCCAGAGAGGGCGACGAAT...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306117.5
CDS-3UTR CCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTACTTGTGGATCAACTCTaGGGATCCATGAATCACCAA +
Preference number: 4 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLLVDQL*GSMNHQ
Trigger: TTGGTGATTCATGGATCCCCAGAGTTGATCCACAAG...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAATTGCTGACTCCTGTTaGATGCTCCTAGAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLIADSC*MLLERN
Trigger: GTTCCTTTCTAGGAGCATCCAACAGGAGTCAGCAAT...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGAGCAGAAACACGTCCTaGGGCCCAGCTCTTTATTTG +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRSRNTS*GPALYL
Trigger: CAAATAAAGAGCTGGGCCCCAGGACGTGTTTCTGCT...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTGCAACCTGTTCTGGCTaGCACAACCACAAAGTTTGT +
Preference number: 4 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFATCSG*HNHKVC
Trigger: ACAAACTTTGTGGTTGTGCCAGCCAGAACAGGTTGC...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATTGCCCACCCTCTCCAATACTTGCAACCTGTTCTaGCTGGCACAACCACAAAGT +
Preference number: 4 (lower is better)
Translates to: EPENVDSKSFHILPTLSNTCNLF*LAQPQS
Trigger: ACTTTGTGGTTGTGCCAGCCAGAACAGGTTGCAAGT...ATTGGAGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGTTGATTTTGGATTTCTaGCCTCCAGAACTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARLILDF*PPELSE
Trigger: CTCTGACAGTTCTGGAGGCCAGAAATCCAAAATCAA...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATTGCCCACCCTCTCCAATGAGATGAGGTCATCTTaGATTATCCTGGTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: EPENVDSKSFHILPTLSNEMRSS*IILVGL
Trigger: TAGGCCCACCAGGATAATCCAAGATGACCTCATCTC...ATTGGAGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp TTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGTTTTAAGCCATCAAACGACACCTCGAAGCTaGACCAGGCGATGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: FLASRTVREYTSTVLSHQTTPRS*TRRCRS
Trigger: ACTTCTGCATCGCCTGGTTCAGCTTCGAGGTGTCGT...TTGATGGCTTAAAACAGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp TTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGTTTTAAGCCATCAAACACTATGGGGAACCTaGGAGTGCATGCCTCACGCA +
Preference number: 4 (lower is better)
Translates to: FLASRTVREYTSTVLSHQTLWGT*ECMPHA
Trigger: TGCGTGAGGCATGCACTCTCAGGTTCCCCATAGTGT...TTGATGGCTTAAAACAGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGCATAATGGTTTTCACTaGTACATGGGAAGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRHNGFH*YMGRGA
Trigger: CGCTCCCCTTCCCATGTATCAGTGAAAACCATTATG...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGACACCCCATCAATGCTaGTCAGCAAGTCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRTPHQC*SASPQT
Trigger: AGTTTGAGGACTTGCTGAGCAGCATTGATGGGGTGT...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GAGCCTGAGAATGTGGATTCCAAGTCATTCCACATATTGCCCACCCTCTCCAATACCAAATACCTACTCTaGACCAAGCCCAGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: EPENVDSKSFHILPTLSNTKYLL*TKPRVQ
Trigger: TTGAACTCTGGGCTTGGTGCAGAGTAGGTATTTGGT...ATTGGAGAGGGTGGGCAATATGTGGAATGACTTGGAATCCACATTCTCAGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTAGGCCAAACATGACCTaGTTCATGTACAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLRPNMT*FMYRRC
Trigger: GCACCTCCTGTACATGAACCAGGTCATGTTTGGCCT...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTCTTGTGGATCAACTCTaGGGATCCATGAATCACCAA +
Preference number: 4 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIALVDQL*GSMNHQ
Trigger: TTGGTGATTCATGGATCCCCAGAGTTGATCCACAAG...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGGCTTTCATTGCCCTCTaGGTCACAGATTCTGACCAT +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRAFIAL*VTDSDH
Trigger: ATGGTCAGAATCTGTGACCCAGAGGGCAATGAAAGC...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTTCCTCTGTTCCAATCTaGAGACCCAGAATCCATGCG +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLSSVPI*RPRIHA
Trigger: CGCATGGATTCTGGGTCTCCAGATTGGAACAGAGGA...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGAGTGTGCAGAAGGGCTaGTATGTGTGTGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRSVQKG*YVCGEF
Trigger: GAATTCACCACACACATACCAGCCCTTCTGCACACT...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTTGGAGCCTGAGAATGTaGATTCCAAGTCATTCCACA +
Preference number: 4 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFWSLRM*IPSHST
Trigger: TGTGGAATGACTTGGAATCCACATTCTCAGGCTCCA...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTTGTTACAGCAGCTGCTaGAAACTAATATATCTTCCA +
Preference number: 4 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFCYSSC*KLIYLP
Trigger: TGGAAGATATATTAGTTTCCAGCAGCTGCTGTAACA...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR CAA 72 bp ACAGAATCTAGGGTAGCACTGTCCTGTCCTGGGCCTTaGGAGGAAGGAATGCAGCTTTTGAATCTCATTTCT +
Preference number: 4 (lower is better)
Translates to: TESRVALSCPGP*EEGMQLLNLIS
Trigger: AGAAATGAGATTCAAAAGCTGCATTCCTTCCTCCAAAGGCCCAGGACAGGACAGTGCTACCCTAGATTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CAA 72 bp TCTCACATCAGCCCTGGGAGGAAGGTCGGAAGATTATaGCTTAGCAAATCTTGCATACCAGCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SHISPGRKVGRL*LSKSCIPAKEA
Trigger: TGCCTCTTTAGCTGGTATGCAAGATTTGCTAAGCAATAATCTTCCGACCTTCCTCCCAGGGCTGATGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTCACACGCAAACTTCATaGGGGCAGAAGAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLHTQTS*GQKKDG
Trigger: TCCATCTTTCTTCTGCCCTCATGAAGTTTGCGTGTG...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGACCCTTCCCTGGCTCTaGAAGGGATTTCTTATCTTG +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELTLPWL*KGFLIL
Trigger: CAAGATAAGAAATCCCTTTCAGAGCCAGGGAAGGGT...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGGCTGTAGGAATTGGTTaGTCTATTCAACATTTACCA +
Preference number: 4 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARAVGIG*SIQHLP
Trigger: TGGTAAATGTTGAATAGATCAACCAATTCCTACAGC...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGCATAATGGTTTTCACTaGTACATGGGAAGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELHNGFH*YMGRGA
Trigger: CGCTCCCCTTCCCATGTATCAGTGAAAACCATTATG...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGGACATACACAGACACTaGAGTGAGATCAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELDIHRH*SEIRGR
Trigger: TCTGCCTCTGATCTCACTTCAGTGTCTGTGTATGTC...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTAGGCACTGGAAGACTTaGCATACACAGACACTGAAG +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLRHWKT*HTQTLK
Trigger: CTTCAGTGTCTGTGTATGTCAAGTCTTCCAGTGCCT...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTATTCATGTACAGGAGGTaGTCAGGAATCATTAGTATC +
Preference number: 4 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLFMYRR*SGIISI
Trigger: GATACTAATGATTCCTGAGCACCTCCTGTACATGAA...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTAGGTCGGAAGATTATTaGTTAGCAAATCTTGCATAC +
Preference number: 4 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFRSEDY*LANLAY
Trigger: GTATGCAAGATTTGCTAAGCAATAATCTTCCGACCT...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGACACACCTTCACACATaGCATTCTCTCTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELTHLHT*HSLCLE
Trigger: CTCCAAGCAGAGAGAATGGCATGTGTGAAGGTGTGT...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTTTTCTTGGTGTGTTCTaGAAGACCATAAGGGTGCTA +
Preference number: 4 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFFLGVF*KTIRVL
Trigger: TAGCACCCTTATGGTCTTGCAGAACACACCAAGAAA...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTGCCCAGCTCTTTATTTaGATAATGGTTTTCACTGAT +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTAQLFI*IMVFTD
Trigger: ATCAGTGAAAACCATTATGCAAATAAAGAGCTGGGC...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTGTGGGCTGTAGGAATTaGTTGATCTATTCAACATTT +
Preference number: 4 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTVGCRN*LIYSTF
Trigger: AAATGTTGAATAGATCAACCAATTCCTACAGCCCAC...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTAGTGTGCAGAAGGGCTaGTATGTGTGTGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLSVQKG*YVCGEF
Trigger: GAATTCACCACACACATACCAGCCCTTCTGCACACT...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGTGCCAAATCCAGGACTaGAGCCTGAGAATGTGGATT +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELCQIQD*SLRMWI
Trigger: AATCCACATTCTCAGGCTCCAGTCCTGGATTTGGCA...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTAAGGAAAGCCAAGAATaGTGGCAGCCACCACAAACT +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLKESQE*WQPPQT
Trigger: AGTTTGTGGTGGCTGCCACCATTCTTGGCTTTCCTT...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTGACTTTCTCAGCAAGTaGAGAGAAGATTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KPVFIYVSPLNISELSWLDFLSK*REDSAG
Trigger: ACCTGCTGAATCTTCTCTTCACTTGCTGAGAAAGTC...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR TCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGCGGGTATTTGTTGAGTaGGTGAGTGAAGAACCTACA +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELRVFVE*VSEEPT
Trigger: TGTAGGTTCTTCACTCACTCACTCAACAAATACCCG...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTTTCATGTACAGGAGGTaGTCAGGAATCATTAGTATC +
Preference number: 4 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFFMYRR*SGIISI
Trigger: GATACTAATGATTCCTGAGCACCTCCTGTACATGAA...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGAAGAGGCAAGTACAATaGTATGGTACTTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELKRQVQ*YGTSSQ
Trigger: CTGGGAGGAAGTACCATAGCATTGTACTTGCCTCTT...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp GAAATCAGACTCTCTCCTGGGATTGGAACTGTGAGCAGGATGATACAGGGAAGGGCCCAGCTCTTTATTTaGATAATGGTTTTCACTGAT +
Preference number: 4 (lower is better)
Translates to: EIRLSPGIGTVSRMIQGRAQLFI*IMVFTD
Trigger: ATCAGTGAAAACCATTATGCAAATAAAGAGCTGGGC...CCTTCCCTGTATCATCCTGCTCACAGTTCCAATCCCAGGAGAGAGTCTGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp GAAATCAGACTCTCTCCTGGGATTGGAACTGTGAGCAGGATGATACAGGGAAGGGTGGGCTGTAGGAATTaGTTGATCTATTCAACATTT +
Preference number: 4 (lower is better)
Translates to: EIRLSPGIGTVSRMIQGRVGCRN*LIYSTF
Trigger: AAATGTTGAATAGATCAACCAATTCCTACAGCCCAC...CCTTCCCTGTATCATCCTGCTCACAGTTCCAATCCCAGGAGAGAGTCTGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTGCTGTAGGAATTGGTTaGTCTATTCAACATTTACCA +
Preference number: 4 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFAVGIG*SIQHLP
Trigger: TGGTAAATGTTGAATAGATCAACCAATTCCTACAGC...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR GCA 90 bp GAAATCAGACTCTCTCCTGGGATTGGAACTGTGAGCAGGATGATACAGGGAAGGTTGATGTCAGTTTGTTaGTTATACCCTCAAACTCTA +
Preference number: 4 (lower is better)
Translates to: EIRLSPGIGTVSRMIQGRLMSVC*LYPQTL
Trigger: TAGAGTTTGAGGGTATAAGCAACAAACTGACATCAA...CCTTCCCTGTATCATCCTGCTCACAGTTCCAATCCCAGGAGAGAGTCTGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp TTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGTTTTAAGCCATCAAGCAAGTACAATGCTATaGTACTTCCTCCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: FLASRTVREYTSTVLSHQASTML*YFLPGL
Trigger: GAGTCCTGGGAGGAAGTACCATAGCATTGTACTTGC...TTGATGGCTTAAAACAGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp TTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGTTTTAAGCCATCAAGAAAGCCAAGAATGGTaGCAGCCACCACAAACTAGA +
Preference number: 4 (lower is better)
Translates to: FLASRTVREYTSTVLSHQESQEW*QPPQTR
Trigger: TCTAGTTTGTGGTGGCTGCCACCATTCTTGGCTTTC...TTGATGGCTTAAAACAGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR TCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGTATTTGTTGAGTGAGTaGGTGAAGAACCTACAAGGA +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELYLLSE*VKNLQG
Trigger: TCCTTGTAGGTTCTTCACTCACTCACTCAACAAATA...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGTTGCTTAGCAAATCTTaGATACCAGCTAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELLLSKS*IPAKEA
Trigger: TGCCTCTTTAGCTGGTATGCAAGATTTGCTAAGCAA...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR GCA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTCCCTGGAACCTCATTTaGTTAATTAGCAATTTATCA +
Preference number: 4 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIAPWNLI*LISNLS
Trigger: TGATAAATTGCTAATTAAGCAAATGAGGTTCCAGGG...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CCA 90 bp CATCTTGATTTTGGATTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTTGCCTGCTTCATGAATaGCTTGGAGGCAGGTTTATA +
Preference number: 4 (lower is better)
Translates to: HLDFGFLASRTVREYTSTCLLHE*LGGRFI
Trigger: TATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCA...AGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAATCCAAAATCAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp TTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTGTTTTAAGCCATCAAGTTTTCACTGATACATaGGAAGGGGAGCGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: FLASRTVREYTSTVLSHQVFTDT*EGERVV
Trigger: AACAACTCGCTCCCCTTCCCATGTATCAGTGAAAAC...TTGATGGCTTAAAACAGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CCA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTTTTGGTGACAATAGGTaGTCTTTTATTTGGGTAAGT +
Preference number: 4 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIAFGDNR*SFIWVS
Trigger: ACTTACCCAAATAAAAGACCACCTATTGTCACCAAA...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537075.3
3UTR CAA 72 bp TTAATTAGCAATTTATCATTTGGATGGCAGGTTAGATaGTCACTTGCTCAGGAAAGCCTTCTCACTTTCTCG +
Preference number: 4 (lower is better)
Translates to: LISNLSFGWQVR*SLAQESLLTFS
Trigger: CGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTGACAATCTAACCTGCCATCCAAATGATAAATTGCTAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
3UTR CAA 72 bp ACTTCTACTGTTTTAAGCCATCAAGTTTGTTTGAATTaGTTACAGCAGCTGCTGGAAACTAATATATCTTCC +
Preference number: 4 (lower is better)
Translates to: TSTVLSHQVCLN*LQQLLETNISS
Trigger: GGAAGATATATTAGTTTCCAGCAGCTGCTGTAACAAATTCAAACAAACTTGATGGCTTAAAACAGTAGAAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS GCA 90 bp CCCAGCCGCGTGCCCGGGAAGCGCGCCAGGGCGCGCGCGCTCAGCTaGCGCCGCACGCCACCCACGTTCACGCGCAGCGCCTCGTCGCTT +
Preference number: 5 (lower is better)
Translates to: PSRVPGKRARARALS*RRTPPTFTRSASSL
Trigger: AAGCGACGAGGCGCTGCGCGTGAACGTGGGTGGCGTGCGGCGGCAGCTGAGCGCGCGCGCCCTGGCGCGCTTCCCGGGCACGCGGCTGGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 90 bp AAGCCACCGAGGCTGGGAGCCGCTGGCTATACTCGGTCTCGCCTCTaGCCCGCCGGCCCCGCCGAGCCTCCTGCTGCAGGCGGCCCCGCT +
Preference number: 5 (lower is better)
Translates to: KPPRLGAAGYTRSRL*PAGPAEPPAAGGPA
Trigger: AGCGGGGCCGCCTGCAGCAGGAGGCTCGGCGGGGCCGGCGGGGCAGAGGCGAGACCGAGTATAGCCAGCGGCTCCCAGCCTCGGTGGCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 90 bp GGCGCCTCGCGTGTCTGTCCCAAAGCCACCGAGGCTGGGAGCCGCTaGCTATACTCGGTCTCGCCTCTGCCCCGCCGGCCCCGCCGAGCC +
Preference number: 5 (lower is better)
Translates to: GASRVCPKATEAGSR*LYSVSPLPRRPRRA
Trigger: GGCTCGGCGGGGCCGGCGGGGCAGAGGCGAGACCGAGTATAGCCAGCGGCTCCCAGCCTCGGTGGCTTTGGGACAGACACGCGAGGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 90 bp GCACCTCCCGGGCGCCTCGCGTGTCTGTCCCAAAGCCACCGAGGCTaGGAGCCGCTGGCTATACTCGGTCTCGCCTCTGCCCCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: APPGRLACLSQSHRG*EPLAILGLASAPPA
Trigger: GGCCGGCGGGGCAGAGGCGAGACCGAGTATAGCCAGCGGCTCCCAGCCTCGGTGGCTTTGGGACAGACACGCGAGGCGCCCGGGAGGTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 90 bp GTTCTCGCTGCACGTCGGAGATCTCGTCGGGGCACGGGTCCACGCTaGTCGGCGTGTCGCTGTCCTCGTCCCAGGCGTGCGGCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: VLAARRRSRRGTGPR*SACRCPRPRRAAGS
Trigger: TGACCCAGCCGCACGCCTGGGACGAGGACAGCGACACGCCGAGCAGCGTGGACCCGTGCCCCGACGAGATCTCCGACGTGCAGCGAGAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS TCA 90 bp TGCGCGTACTGGGCGCCAGCAGGAGGCGCGACGACACCTCGAAGCTaGACCAGGCGATGCAGAAGTACTCGAGGCGTCGCAGCACCGGGT +
Preference number: 5 (lower is better)
Translates to: CAYWAPAGGATTPRS*TRRCRSTRGVAAPG
Trigger: ACCCGGTGCTGCGACGCCTCGAGTACTTCTGCATCGCCTGGTTCAGCTTCGAGGTGTCGTCGCGCCTCCTGCTGGCGCCCAGTACGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 90 bp CTCATAGTGTGTTCCCCGGACCAGCAGCATCAGCATCACCTGTGGTaGCACCTCCCGGGCGCCTCGCGTGTCTGTCCCAAAGCCACCGAG +
Preference number: 5 (lower is better)
Translates to: LIVCSPDQQHQHHLW*HLPGASRVCPKATE
Trigger: CTCGGTGGCTTTGGGACAGACACGCGAGGCGCCCGGGAGGTGCCACCACAGGTGATGCTGATGCTGCTGGTCCGGGGAACACACTATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS CCA 90 bp GTTCTCATAGTGTGTTCCCCGGACCAGCAGCATCAGCATCACCTGTaGTGGCACCTCCCGGGCGCCTCGCGTGTCTGTCCCAAAGCCACC +
Preference number: 5 (lower is better)
Translates to: VLIVCSPDQQHQHHL*WHLPGASRVCPKAT
Trigger: GGTGGCTTTGGGACAGACACGCGAGGCGCCCGGGAGGTGCCACCACAGGTGATGCTGATGCTGCTGGTCCGGGGAACACACTATGAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGAGGTGGCCGAACTCCTaGCCGCCCTGGTCGCCCAGT +
Preference number: 5 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLRWPNS*PPWSPS
Trigger: ACTGGGCGACCAGGGCGGCAAGGAGTTCGGCCACCT...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGCCTGAGGCTGCCAGCTaGCCAGCCACCGTCACTGGC +
Preference number: 5 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLPEAAS*PATVTG
Trigger: GCCAGTGACGGTGGCTGGCAAGCTGGCAGCCTCAGG...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGGGGTGGCAGAAGAAGTaGCGCGTACTGGGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLGWQKK*RVLGAS
Trigger: GCTGGCGCCCAGTACGCGCAACTTCTTCTGCCACCC...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 90 bp TCCGACACCCCATCAATGCTGCTCAGCAAGTCCTCAAACTCTTGGTaGTTGCTGTTGCGCACGGCTGCCTCCAGAGCCTTCTGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: SDTPSMLLSKSSNSW*LLLRTAASRAFWRR
Trigger: CCGGCGCCAGAAGGCTCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCAGCATTGATGGGGTGTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 90 bp GCCTCCGACACCCCATCAATGCTGCTCAGCAAGTCCTCAAACTCTTaGTGGTTGCTGTTGCGCACGGCTGCCTCCAGAGCCTTCTGGCGC +
Preference number: 5 (lower is better)
Translates to: ASDTPSMLLSKSSNS*WLLLRTAASRAFWR
Trigger: GCGCCAGAAGGCTCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCAGCATTGATGGGGTGTCGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGCGCTCCCACCTCCACTaGGATCTCCACCTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLRSHLH*DLHLWW
Trigger: CCACCACAGGTGGAGATCCAAGTGGAGGTGGGAGCG...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306117.5
CDS-3UTR CAA 90 bp CCAACTGCCGCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGCCTGAGGCTGCCAGCTaGCCAGCCACCGTCACTGGC +
Preference number: 5 (lower is better)
Translates to: PTAANTNTVPCPPSLPREPEAAS*PATVTG
Trigger: GCCAGTGACGGTGGCTGGCAAGCTGGCAGCCTCAGG...CTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGCGGCAGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGTCTTGGTGGTTGCTGTaGCGCACGGCTGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLSWWLL*RTAASR
Trigger: TCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAGA...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 90 bp CATCAATGCTGCTCAGCAAGTCCTCAAACTCTTGGTGGTTGCTGTTaGGCACGGCTGCCTCCAGAGCCTTCTGGCGCCGGTAGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: HQCCSASPQTLGGCC*ARLPPEPSGAGRSG
Trigger: CCCACTTCTACCGGCGCCAGAAGGCTCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCAGCATTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 90 bp ACACCCCATCAATGCTGCTCAGCAAGTCCTCAAACTCTTGGTGGTTaGTGTTGCGCACGGCTGCCTCCAGAGCCTTCTGGCGCCGGTAGA +
Preference number: 5 (lower is better)
Translates to: TPHQCCSASPQTLGG*CCARLPPEPSGAGR
Trigger: TCTACCGGCGCCAGAAGGCTCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCAGCATTGATGGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCCTCCTTCCTTCTTCCTaGCCTAGTCCCCCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSLLPSS*PSPPRL
Trigger: CAGCCGCGGGGGACTAGGCAAGGAAGAAGGAAGGAG...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTGGGTGGCAGAAGAAGTaGCGCGTACTGGGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFGWQKK*RVLGAS
Trigger: GCTGGCGCCCAGTACGCGCAACTTCTTCTGCCACCC...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 90 bp TTCCCCGGACCAGCAGCATCAGCATCACTAGCTGCTGTCCTTGAGTaGATTCGTCGCCCTCTCTGGGCTTGTTTCCCTGTCTGTGGAACC +
Preference number: 5 (lower is better)
Translates to: FPGPAASASLAAVLE*IRRPLWACFPVCGT
Trigger: GGTTCCACAGACAGGGAAACAAGCCCAGAGAGGGCGACGAATGCACTCAAGGACAGCAGCTAGTGATGCTGATGCTGCTGGTCCGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306117.5
CDS CCA 90 bp TCACGGATCCCTGGTTTTAATACATCTGAGGGTGTGGAGGCTCACTaGGGGCCTGGCTCTCTAGATCTGCAGACTGTCCCTCCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: SRIPGFNTSEGVEAH*GPGSLDLQTVPPER
Trigger: CCTCTCAGGAGGGACAGTCTGCAGATCTAGAGAGCCAGGCCCCCAGTGAGCCTCCACACCCTCAGATGTATTAAAACCAGGGATCCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTAGGTGGCCGAACTCCTaGCCGCCCTGGTCGCCCAGT +
Preference number: 5 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFRWPNS*PPWSPS
Trigger: ACTGGGCGACCAGGGCGGCAAGGAGTTCGGCCACCT...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGTCTTGGTGGTTGCTGTaGCGCACGGCTGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GQAELNGPPFQSCSHLFESWWLL*RTAASR
Trigger: TCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAGA...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGAAGCCGTCGGGTTTCTaGGTGTGTTCTGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLKPSGF*VCSARP
Trigger: TGGTCTTGCAGAACACACCAAGAAACCCGACGGCTT...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 90 bp TTTCTCGGGATGTCTCCAGAGATGCCTCCGACACCCCATCAATGCTaGTCAGCAAGTCCTCAAACTCTTGGTGGTTGCTGTTGCGCACGG +
Preference number: 5 (lower is better)
Translates to: FLGMSPEMPPTPHQC*SASPQTLGGCCCAR
Trigger: CCGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCAGCATTGATGGGGTGTCGGAGGCATCTCTGGAGACATCCCGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 90 bp TGCAGACTGTCCCTCCTGAGAGGTTTCTCGGGATGTCTCCAGAGATaGCTCCGACACCCCATCAATGCTGCTCAGCAAGTCCTCAAACTC +
Preference number: 5 (lower is better)
Translates to: CRLSLLRGFSGCLQR*LRHPINAAQQVLKL
Trigger: GAGTTTGAGGACTTGCTGAGCAGCATTGATGGGGTGTCGGAGGCATCTCTGGAGACATCCCGAGAAACCTCTCAGGAGGGACAGTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAAACACCTGCACCACCTaGCCCAGGTGGCCGAACTCC +
Preference number: 5 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLNTCTT*PRWPNS
Trigger: GGAGTTCGGCCACCTGGGCAAGGTGGTGCAGGTGTT...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGCTTGGCGCAGCTAGGTaGTCTAGATCTCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GQAELNGPPFQSCSHLFELGAAR*SRSQAR
Trigger: CCTGGCCTGAGATCTAGACAACCTAGCTGCGCCAAG...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp CCAACTGCCGCAAATACTAATACGGTACCTTGCCCTCCATCCCTCCCAAGAGAGACCCCTCTGCTCTCCTaGGCTTTCATTGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: PTAANTNTVPCPPSLPRETPLLS*AFIALW
Trigger: CCAGAGGGCAATGAAAGCCAAGGAGAGCAGAGGGGT...CTCTCTTGGGAGGGATGGAGGGCAAGGTACCGTATTAGTATTTGCGGCAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGGGGAAGGGGAGCGAGTaGTTGCTTTTCTGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GQAELNGPPFQSCSHLFEGKGSE*LLFCQD
Trigger: GTCCTGGCAGAAAAGCAACAACTCGCTCCCCTTCCC...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 90 bp AGGTTTCTCGGGATGTCTCCAGAGATGCCTCCGACACCCCATCAATaGTGCTCAGCAAGTCCTCAAACTCTTGGTGGTTGCTGTTGCGCA +
Preference number: 5 (lower is better)
Translates to: RFLGMSPEMPPTPHQ*CSASPQTLGGCCCA
Trigger: TGCGCAACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCAGCATTGATGGGGTGTCGGAGGCATCTCTGGAGACATCCCGAGAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTAACACCTGCACCACCTaGCCCAGGTGGCCGAACTCC +
Preference number: 5 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIANTCTT*PRWPNS
Trigger: GGAGTTCGGCCACCTGGGCAAGGTGGTGCAGGTGTT...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGTCAAACTCTTGGTGGTaGCTGTTGCGCACGGCTGCC +
Preference number: 5 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARSNSWW*LLRTAA
Trigger: GGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTGA...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTTCAAACTCTTGGTGGTaGCTGTTGCGCACGGCTGCC +
Preference number: 5 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTSNSWW*LLRTAA
Trigger: GGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTGA...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCCAAGTCCTCAAACTCTaGGTGGTTGCTGTTGCGCAC +
Preference number: 5 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSQVLKL*VVAVAH
Trigger: GTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTG...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGTCCTGTCCTGGGCCTTaGGAGGAAGGAATGCAGCTT +
Preference number: 5 (lower is better)
Translates to: GQAELNGPPFQSCSHLFESCPGP*EEGMQL
Trigger: AAGCTGCATTCCTTCCTCCAAAGGCCCAGGACAGGA...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGACCCCTCTGCTCTCCTaGGCTTTCATTGCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARTPLLS*AFIALW
Trigger: CCAGAGGGCAATGAAAGCCAAGGAGAGCAGAGGGGT...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp CACTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGTTCAAGGGAGGCCCTTaGCTGCTTAGCTCCATCCTC +
Preference number: 5 (lower is better)
Translates to: HSDSMSGSHLHTSRNTSWFKGGP*LLSSIL
Trigger: GAGGATGGAGCTAAGCAGCAAAGGGCCTCCCTTGAA...CCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp CTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGAAGCCGTCGGGTTTCTaGGTGTGTTCTGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: LRQHVREPSPYKQKHVLGKPSGF*VCSARP
Trigger: TGGTCTTGCAGAACACACCAAGAAACCCGACGGCTT...CCCCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS TCA 90 bp TCGGCAGCATGGTCCCTGGCACATAATCAATGCACAATAAACGTGTaGTGTAGCTCCGCTCCCACCTCCACTTGGATCTCCACCTGTGGT +
Preference number: 5 (lower is better)
Translates to: SAAWSLAHNQCTINV*CSSAPTSTWISTCG
Trigger: ACCACAGGTGGAGATCCAAGTGGAGGTGGGAGCGGAGCTACATCACACGTTTATTGTGCATTGATTATGTGCCAGGGACCATGCTGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306117.5
CDS-3UTR CAA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGACAATGTCGATGAGGTaGAGCGGGTGGCAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: GQAELNGPPFQSCSHLFETMSMR*SGWQKK
Trigger: CTTCTTCTGCCACCCGCTCAACCTCATCGACATTGT...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GGTGCTGTAGCCACAGTATGTGGAAAGGGCTACTGGATCCCCTCCTCTGACTTTCAAGTCCTCAAACTCTaGGTGGTTGCTGTTGCGCAC +
Preference number: 5 (lower is better)
Translates to: GAVATVCGKGYWIPSSDFQVLKL*VVAVAH
Trigger: GTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTG...AAAGTCAGAGGAGGGGATCCAGTAGCCCTTTCCACATACTGTGGCTACAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTACTTGGGGGCAGGGATaGGACCACTTTACACAGCAG +
Preference number: 5 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTTWGQG*DHFTQQ
Trigger: CTGCTGTGTAAAGTGGTCCAATCCCTGCCCCCAAGT...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp CACTGTTGGACTAAGCCGAAACATGACTGCAGGCCACACATGAAGCCCCAGTTTTTCAAGGGAGGCCCTTaGCTGCTTAGCTCCATCCTC +
Preference number: 5 (lower is better)
Translates to: HCWTKPKHDCRPHMKPQFFKGGP*LLSSIL
Trigger: GAGGATGGAGCTAAGCAGCAAAGGGCCTCCCTTGAA...AAACTGGGGCTTCATGTGTGGCCTGCAGTCATGTTTCGGCTTAGTCCAACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGCTCCTTCCTTCTTCCTaGCCTAGTCCCCCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELLLPSS*PSPPRL
Trigger: CAGCCGCGGGGGACTAGGCAAGGAAGAAGGAAGGAG...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTACAATGTCGATGAGGTaGAGCGGGTGGCAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTTMSMR*SGWQKK
Trigger: CTTCTTCTGCCACCCGCTCAACCTCATCGACATTGT...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp TGGGCCTGGATGGGTACTCTAGGTAGGGCTGGACAATGTAGGGCTGGACGTCTGGAAGGAATGCAGCTTTaGAATCTCATTTCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: WAWMGTLGRAGQCRAGRLEGMQL*NLISQD
Trigger: GTCCTGAGAAATGAGATTCAAAAGCTGCATTCCTTC...CAGACGTCCAGCCCTACATTGTCCAGCCCTACCTAGAGTACCCATCCAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GGGCAGGCGGAGCTGAACGGACCTCCTTTTCAGTCTTGTTCACACCTTTTTGAGTCTCCTTGGCTTTCATaGCCCTCTGGGTCACAGATT +
Preference number: 5 (lower is better)
Translates to: GQAELNGPPFQSCSHLFESPWLS*PSGSQI
Trigger: AATCTGTGACCCAGAGGGCAATGAAAGCCAAGGAGA...CTCAAAAAGGTGTGAACAAGACTGAAAAGGAGGTCCGTTCAGCTCCGCCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp CAAGAATGGTGGCAGCCACCACAAACTAGAAGAGAAAAGGAGAGGGTTTCCCCCACAATGTCTTCCATCTaGAGGCTCAGGGTGATGGGA +
Preference number: 5 (lower is better)
Translates to: QEWWQPPQTRREKERVSPTMSSI*RLRVMG
Trigger: TCCCATCACCCTGAGCCTCAAGATGGAAGACATTGT...GGGGGAAACCCTCTCCTTTTCTCTTCTAGTTTGTGGTGGCTGCCACCATTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGCTTGTTCACACCTTTTaGAGGGCCAGGTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARLVHTF*RARSLS
Trigger: AGAGAGAGACCTGGCCCTCAAAAAGGTGTGAACAAG...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCAGGTTAGATTGTCACTaGCTCAGGAAAGCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSRLDCH*LRKAFS
Trigger: TGAGAAGGCTTTCCTGAGCAAGTGACAATCTAACCT...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTAAGGGGAGCGAGTTGTaGCTTTTCTGCCAGGACCAC +
Preference number: 5 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIAKGSEL*LFCQDH
Trigger: GTGGTCCTGGCAGAAAAGCAACAACTCGCTCCCCTT...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGGGGAAGGGGAGCGAGTaGTTGCTTTTCTGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRGKGSE*LLFCQD
Trigger: GTCCTGGCAGAAAAGCAACAACTCGCTCCCCTTCCC...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGGCACAACCACAAAGTTaGTGCCAAATCCAGGACTGG +
Preference number: 5 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARAQPQS*CQIQDW
Trigger: CCAGTCCTGGATTTGGCACAAACTTTGTGGTTGTGC...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTACTGAATTCCTGTCACTaGCAACCTGTTCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLLNSCH*QPVLAG
Trigger: GCCAGCCAGAACAGGTTGCAAGTGACAGGAATTCAG...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp AGGTTCATGAGTCTTGCTACTGAGGTCCCTAGAGCTCCCCTCATTCCTGTATTTGGAGTTGATGGAGCATaGCTCCAGGCACACCAACAA +
Preference number: 5 (lower is better)
Translates to: RFMSLATEVPRAPLIPVFGVDGA*LQAHQQ
Trigger: TTGTTGGTGTGCCTGGAGCAATGCTCCATCAACTCC...AAATACAGGAATGAGGGGAGCTCTAGGGACCTCAGTAGCAAGACTCATGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp CAGGACCACAAACAGCCTCATGGTAGGCTCAGGCCAGATGATTCCCTCTTGAGCAAGGGATTTCTTATCTaGTGGATCAACTCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: QDHKQPHGRLRPDDSLLSKGFLI*WINSGD
Trigger: ATCCCCAGAGTTGATCCACAAGATAAGAAATCCCTT...GCTCAAGAGGGAATCATCTGGCCTGAGCCTACCATGAGGCTGTTTGTGGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAACAATGTCTTCCATCTaGAGGCTCAGGGTGATGGGA +
Preference number: 5 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLTMSSI*RLRVMG
Trigger: TCCCATCACCCTGAGCCTCAAGATGGAAGACATTGT...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTTCCTGTCCTGGGCCTTaGGAGGAAGGAATGCAGCTT +
Preference number: 5 (lower is better)
Translates to: KPVFIYVSPLNISELSWLSCPGP*EEGMQL
Trigger: AAGCTGCATTCCTTCCTCCAAAGGCCCAGGACAGGA...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGGGAGTTGATGGAGCATaGCTCCAGGCACACCAACAA +
Preference number: 5 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRGVDGA*LQAHQQ
Trigger: TTGTTGGTGTGCCTGGAGCAATGCTCCATCAACTCC...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTAGGTTAGATTGTCACTaGCTCAGGAAAGCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTRLDCH*LRKAFS
Trigger: TGAGAAGGCTTTCCTGAGCAAGTGACAATCTAACCT...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTAAGGGGAGCGAGTTGTaGCTTTTCTGCCAGGACCAC +
Preference number: 5 (lower is better)
Translates to: KPVFIYVSPLNISELSWLKGSEL*LFCQDH
Trigger: GTGGTCCTGGCAGAAAAGCAACAACTCGCTCCCCTT...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp CTCAGACAGCATGTCAGGGAGCCATCTCCATACAAGCAGAAACACGTCCTGGGGCAAGTTTGTTTGAATTaGTTACAGCAGCTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LRQHVREPSPYKQKHVLGQVCLN*LQQLLE
Trigger: TTCCAGCAGCTGCTGTAACAAATTCAAACAAACTTG...CCCCAGGACGTGTTTCTGCTTGTATGGAGATGGCTCCCTGACATGCTGTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp TCAGAAAATATGGAAGCCGTCGGGTTTCTTGGTGTGTTCTGCAAGACCATAAGGCTTGTTCACACCTTTTaGAGGGCCAGGTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: SENMEAVGFLGVFCKTIRLVHTF*RARSLS
Trigger: AGAGAGAGACCTGGCCCTCAAAAAGGTGTGAACAAG...CCTTATGGTCTTGCAGAACACACCAAGAAACCCGACGGCTTCCATATTTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAAGCTTTCTGAGTTGCTaGCAGAATCTCACAGAATCT +
Preference number: 5 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLSFLSC*QNLTES
Trigger: AGATTCTGTGAGATTCTGCAAGCAACTCAGAAAGCT...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp CACTTGCTCAGGAAAGCCTTCTCACTTTCTCGGGCCATGGTCCCTGATACATTAAAGGGATTTCTTATCTaGTGGATCAACTCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: HLLRKAFSLSRAMVPDTLKGFLI*WINSGD
Trigger: ATCCCCAGAGTTGATCCACAAGATAAGAAATCCCTT...TAATGTATCAGGGACCATGGCCCGAGAAAGTGAGAAGGCTTTCCTGAGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTTTTACACAGCAGGTCTaGGCGCAGCTAGGTTGTCTA +
Preference number: 5 (lower is better)
Translates to: KPVFIYVSPLNISELSWLFTQQV*AQLGCL
Trigger: TAGACAACCTAGCTGCGCCAAGACCTGCTGTGTAAA...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GTTGATGGAGCATTGCTCCAGGCACACCAACAAGCCCAGATTCCAAACCTGACTGGCTGTAGGAATTGGTaGATCTATTCAACATTTACC +
Preference number: 5 (lower is better)
Translates to: VDGALLQAHQQAQIPNLTGCRNW*IYSTFT
Trigger: GGTAAATGTTGAATAGATCAACCAATTCCTACAGCC...AGTCAGGTTTGGAATCTGGGCTTGTTGGTGTGCCTGGAGCAATGCTCCATCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp GCAAGTGAAGAGAAGATTCAGCAGGTGGGTATGAGAGATATGCCCCCAGCAAGGAGCCATCAAGTTTGTTaGAATTTGTTACAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ASEEKIQQVGMRDMPPARSHQVC*NLLQQL
Trigger: CAGCTGCTGTAACAAATTCAAACAAACTTGATGGCT...CCTTGCTGGGGGCATATCTCTCATACCCACCTGCTGAATCTTCTCTTCACTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGAAGTCATTCCACATATaGCCCACCCTCTCCAATCAC +
Preference number: 5 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELKSFHI*PTLSNH
Trigger: GTGATTGGAGAGGGTGGGCAATATGTGGAATGACTT...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp GAAATCAGACTCTCTCCTGGGATTGGAACTGTGAGCAGGATGATACAGGGAAGGTTGCTTGATGTCAGTTaGTTGCTTATACCCTCAAAC +
Preference number: 5 (lower is better)
Translates to: EIRLSPGIGTVSRMIQGRLLDVS*LLIPSN
Trigger: GTTTGAGGGTATAAGCAACAAACTGACATCAAGCAA...CCTTCCCTGTATCATCCTGCTCACAGTTCCAATCCCAGGAGAGAGTCTGATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp CATCTTGATTTTGGATTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTTCTCCTTGGCTTTCATaGCCCTCTGGGTCACAGATT +
Preference number: 5 (lower is better)
Translates to: HLDFGFLASRTVREYTSTSPWLS*PSGSQI
Trigger: AATCTGTGACCCAGAGGGCAATGAAAGCCAAGGAGA...AGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAATCCAAAATCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS-3UTR CAA 90 bp ATTCCAAACCTGACTCTGCCACTTCTAATTGTGACATCTGGGAGAGGCATCGCTGGCTGTAGGAATTGGTaGATCTATTCAACATTTACC +
Preference number: 5 (lower is better)
Translates to: IPNLTLPLLIVTSGRGIAGCRNW*IYSTFT
Trigger: GGTAAATGTTGAATAGATCAACCAATTCCTACAGCC...AGCGATGCCTCTCCCAGATGTCACAATTAGAAGTGGCAGAGTCAGGTTTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp TCATGCCTGCTTCATGAATGGCTTGGAGGCAGGTTTATAAAGCTTTCTGAGTTGGAAGGAATGCAGCTTTaGAATCTCATTTCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: SCLLHEWLGGRFIKLSELEGMQL*NLISQD
Trigger: GTCCTGAGAAATGAGATTCAAAAGCTGCATTCCTTC...CAACTCAGAAAGCTTTATAAACCTGCCTCCAAGCCATTCATGAAGCAGGCATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp AAGCCAGTATTCATATATGTCAGCCCTCTGAACATTTCAGAGCTGAGCTGGCTTAGCTTTCTGAGTTGCTaGCAGAATCTCACAGAATCT +
Preference number: 5 (lower is better)
Translates to: KPVFIYVSPLNISELSWLSFLSC*QNLTES
Trigger: AGATTCTGTGAGATTCTGCAAGCAACTCAGAAAGCT...AAGCCAGCTCAGCTCTGAAATGTTCAGAGGGCTGACATATATGAATACTGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS-3UTR CAA 90 bp CATCTTGATTTTGGATTTCTGGCCTCCAGAACTGTCAGAGAATACACTTCTACTCTTGATGTCAGTTTGTaGCTTATACCCTCAAACTCT +
Preference number: 5 (lower is better)
Translates to: HLDFGFLASRTVREYTSTLDVSL*LIPSNS
Trigger: AGAGTTTGAGGGTATAAGCAACAAACTGACATCAAG...AGTAGAAGTGTATTCTCTGACAGTTCTGGAGGCCAGAAATCCAAAATCAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS GCA 72 bp AGGCTGGGAGCCGCTGGCTATACTCGGTCTCGCCTCTaGCCCGCCGGCCCCGCCGAGCCTCCTGCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: RLGAAGYTRSRL*PAGPAEPPAAG
Trigger: GCCTGCAGCAGGAGGCTCGGCGGGGCCGGCGGGGCAGAGGCGAGACCGAGTATAGCCAGCGGCTCCCAGCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 72 bp GCACGTCGGAGATCTCGTCGGGGCACGGGTCCACGCTaGTCGGCGTGTCGCTGTCCTCGTCCCAGGCGTGCG +
Preference number: 6 (lower is better)
Translates to: ARRRSRRGTGPR*SACRCPRPRRA
Trigger: CGCACGCCTGGGACGAGGACAGCGACACGCCGAGCAGCGTGGACCCGTGCCCCGACGAGATCTCCGACGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 72 bp CGTGTCTGTCCCAAAGCCACCGAGGCTGGGAGCCGCTaGCTATACTCGGTCTCGCCTCTGCCCCGCCGGCCC +
Preference number: 6 (lower is better)
Translates to: RVCPKATEAGSR*LYSVSPLPRRP
Trigger: GGGCCGGCGGGGCAGAGGCGAGACCGAGTATAGCCAGCGGCTCCCAGCCTCGGTGGCTTTGGGACAGACACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 72 bp AGAGCTTGCTCGGCAGCGAGTAGCCCGGGTTCTCCATaGTCAGCCAGAGGCGGCGGCGCAGGCGGCCACAGC +
Preference number: 6 (lower is better)
Translates to: RACSAASSPGSP*SARGGGAGGHS
Trigger: GCTGTGGCCGCCTGCGCCGCCGCCTCTGGCTGACCATGGAGAACCCGGGCTACTCGCTGCCGAGCAAGCTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CAA 90 bp GCCTCCTGCTGCAGGCGGCCCCGCTGCCCTCTCCTTCCTTCTTCCTaGCCTAGTCCCCCGCGGCTGAAGGCCGCATCGATCGCTGCCGGA +
Preference number: 6 (lower is better)
Translates to: ASCCRRPRCPLLPSS*PSPPRLKAASIAAG
Trigger: TCCGGCAGCGATCGATGCGGCCTTCAGCCGCGGGGGACTAGGCAAGGAAGAAGGAAGGAGAGGGCAGCGGGGCCGCCTGCAGCAGGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS CCA 72 bp GGGCGCCTCGCGTGTCTGTCCCAAAGCCACCGAGGCTaGGAGCCGCTGGCTATACTCGGTCTCGCCTCTGCC +
Preference number: 6 (lower is better)
Translates to: GRLACLSQSHRG*EPLAILGLASA
Trigger: GGCAGAGGCGAGACCGAGTATAGCCAGCGGCTCCCAGCCTCGGTGGCTTTGGGACAGACACGCGAGGCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 72 bp CGCATGAGGCGGAACACCTGCACCACCTTGCCCAGGTaGCCGAACTCCTTGCCGCCCTGGTCGCCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: RMRRNTCTTLPR*PNSLPPWSPSA
Trigger: GGCACTGGGCGACCAGGGCGGCAAGGAGTTCGGCCACCTGGGCAAGGTGGTGCAGGTGTTCCGCCTCATGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 72 bp ACACCTGCACCACCTTGCCCAGGTGGCCGAACTCCTTaGCGCCCTGGTCGCCCAGTGCCACACCAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: TPAPPCPGGRTP*RPGRPVPHQPA
Trigger: TGCTGGCTGGTGTGGCACTGGGCGACCAGGGCGGCAAGGAGTTCGGCCACCTGGGCAAGGTGGTGCAGGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 72 bp ACCACCTTGCCCAGGTGGCCGAACTCCTTGCCGCCCTaGTCGCCCAGTGCCACACCAGCCAGCAGCGTGAGA +
Preference number: 6 (lower is better)
Translates to: TTLPRWPNSLPP*SPSATPASSVR
Trigger: TCTCACGCTGCTGGCTGGTGTGGCACTGGGCGACCAGGGCGGCAAGGAGTTCGGCCACCTGGGCAAGGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 72 bp GTGTGTTCCCCGGACCAGCAGCATCAGCATCACCTGTaGTGGCACCTCCCGGGCGCCTCGCGTGTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: VCSPDQQHQHHL*WHLPGASRVCP
Trigger: GGGACAGACACGCGAGGCGCCCGGGAGGTGCCACCACAGGTGATGCTGATGCTGCTGGTCCGGGGAACACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS CAA 72 bp AACACCTGCACCACCTTGCCCAGGTGGCCGAACTCCTaGCCGCCCTGGTCGCCCAGTGCCACACCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: NTCTTLPRWPNS*PPWSPSATPAS
Trigger: GCTGGCTGGTGTGGCACTGGGCGACCAGGGCGGCAAGGAGTTCGGCCACCTGGGCAAGGTGGTGCAGGTGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CAA 90 bp ATGAGGCGGAACACCTGCACCACCTTGCCCAGGTGGCCGAACTCCTaGCCGCCCTGGTCGCCCAGTGCCACACCAGCCAGCAGCGTGAGA +
Preference number: 6 (lower is better)
Translates to: MRRNTCTTLPRWPNS*PPWSPSATPASSVR
Trigger: TCTCACGCTGCTGGCTGGTGTGGCACTGGGCGACCAGGGCGGCAAGGAGTTCGGCCACCTGGGCAAGGTGGTGCAGGTGTTCCGCCTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 72 bp CAGGTGGCCGAACTCCTTGCCGCCCTGGTCGCCCAGTaGCACACCAGCCAGCAGCGTGAGATAGAAGGGCAG +
Preference number: 6 (lower is better)
Translates to: QVAELLAALVAQ*HTSQQREIEGQ
Trigger: CTGCCCTTCTATCTCACGCTGCTGGCTGGTGTGGCACTGGGCGACCAGGGCGGCAAGGAGTTCGGCCACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS TCA 72 bp TGGGCGCCAGCAGGAGGCGCGACGACACCTCGAAGCTaGACCAGGCGATGCAGAAGTACTCGAGGCGTCGCA +
Preference number: 6 (lower is better)
Translates to: WAPAGGATTPRS*TRRCRSTRGVA
Trigger: TGCGACGCCTCGAGTACTTCTGCATCGCCTGGTTCAGCTTCGAGGTGTCGTCGCGCCTCCTGCTGGCGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 72 bp TGTTCCCCGGACCAGCAGCATCAGCATCACCTGTGGTaGCACCTCCCGGGCGCCTCGCGTGTCTGTCCCAAA +
Preference number: 6 (lower is better)
Translates to: CSPDQQHQHHLW*HLPGASRVCPK
Trigger: TTTGGGACAGACACGCGAGGCGCCCGGGAGGTGCCACCACAGGTGATGCTGATGCTGCTGGTCCGGGGAACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537075.3
CDS GCA 72 bp AGACGCACAGCTCGTCGAGCACGTGCAGGTGGCCAGTaGGGTAGAAGTGCAGCAGGCTCAGGAAGAAGCCCG +
Preference number: 6 (lower is better)
Translates to: RRTARRARAGGQ*GRSAAGSGRSP
Trigger: CGGGCTTCTTCCTGAGCCTGCTGCACTTCTACCGCACTGGCCACCTGCACGTGCTCGACGAGCTGTGCGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CAA 72 bp ACAATGTCGATGAGGTTGAGCGGGTGGCAGAAGAAGTaGCGCGTACTGGGCGCCAGCAGGAGGCGCGACGAC +
Preference number: 6 (lower is better)
Translates to: TMSMRLSGWQKK*RVLGASRRRDD
Trigger: GTCGTCGCGCCTCCTGCTGGCGCCCAGTACGCGCAACTTCTTCTGCCACCCGCTCAACCTCATCGACATTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CAA 72 bp CTGCTCAGCAAGTCCTCAAACTCTTGGTGGTTGCTGTaGCGCACGGCTGCCTCCAGAGCCTTCTGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: LLSKSSNSWWLL*RTAASRAFWRR
Trigger: CCGGCGCCAGAAGGCTCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CAA 90 bp AGCACAGACACAATGTCGATGAGGTTGAGCGGGTGGCAGAAGAAGTaGCGCGTACTGGGCGCCAGCAGGAGGCGCGACGACACCTCGAAG +
Preference number: 6 (lower is better)
Translates to: STDTMSMRLSGWQKK*RVLGASRRRDDTSK
Trigger: CTTCGAGGTGTCGTCGCGCCTCCTGCTGGCGCCCAGTACGCGCAACTTCTTCTGCCACCCGCTCAACCTCATCGACATTGTGTCTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 72 bp TGTCGGGGCCCGGGAACTCGCTCACAAAGGTTTCAGTaGTCCTCCCTCCTAGGGGTGTTGGCAGCACCACTT +
Preference number: 6 (lower is better)
Translates to: CRGPGTRSQRFQ*SSLLGVLAAPL
Trigger: AAGTGGTGCTGCCAACACCCCTAGGAGGGAGGAGCACTGAAACCTTTGTGAGCGAGTTCCCGGGCCCCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 72 bp TGCTCAGCAAGTCCTCAAACTCTTGGTGGTTGCTGTTaGGCACGGCTGCCTCCAGAGCCTTCTGGCGCCGGT +
Preference number: 6 (lower is better)
Translates to: CSASPQTLGGCC*ARLPPEPSGAG
Trigger: ACCGGCGCCAGAAGGCTCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 72 bp GGCAGCACAGACACAATGTCGATGAGGTTGAGCGGGTaGCAGAAGAAGTTGCGCGTACTGGGCGCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: GSTDTMSMRLSG*QKKLRVLGASR
Trigger: CCTGCTGGCGCCCAGTACGCGCAACTTCTTCTGCCACCCGCTCAACCTCATCGACATTGTGTCTGTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CAA 90 bp TGCCTCCGACACCCCATCAATGCTGCTCAGCAAGTCCTCAAACTCTaGGTGGTTGCTGTTGCGCACGGCTGCCTCCAGAGCCTTCTGGCG +
Preference number: 6 (lower is better)
Translates to: CLRHPINAAQQVLKL*VVAVAHGCLQSLLA
Trigger: CGCCAGAAGGCTCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCAGCATTGATGGGGTGTCGGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 72 bp CAATGCTGCTCAGCAAGTCCTCAAACTCTTGGTGGTTaGTGTTGCGCACGGCTGCCTCCAGAGCCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: QCCSASPQTLGG*CCARLPPEPSG
Trigger: GCCAGAAGGCTCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCAGCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 72 bp ACCCCATCAATGCTGCTCAGCAAGTCCTCAAACTCTTaGTGGTTGCTGTTGCGCACGGCTGCCTCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: TPSMLLSKSSNS*WLLLRTAASRA
Trigger: GGCTCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCAGCATTGATGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CAA 72 bp CACCCCATCAATGCTGCTCAGCAAGTCCTCAAACTCTaGGTGGTTGCTGTTGCGCACGGCTGCCTCCAGAGC +
Preference number: 6 (lower is better)
Translates to: HPINAAQQVLKL*VVAVAHGCLQS
Trigger: GCTCTGGAGGCAGCCGTGCGCAACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCAGCATTGATGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 72 bp CCAGCAGCATCAGCATCACTAGCTGCTGTCCTTGAGTaGATTCGTCGCCCTCTCTGGGCTTGTTTCCCTGTC +
Preference number: 6 (lower is better)
Translates to: PAASASLAAVLE*IRRPLWACFPV
Trigger: GACAGGGAAACAAGCCCAGAGAGGGCGACGAATGCACTCAAGGACAGCAGCTAGTGATGCTGATGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306117.5
CDS GCA 72 bp TCCCTCCTGAGAGGTTTCTCGGGATGTCTCCAGAGATaGCTCCGACACCCCATCAATGCTGCTCAGCAAGTC +
Preference number: 6 (lower is better)
Translates to: SLLRGFSGCLQR*LRHPINAAQQV
Trigger: GACTTGCTGAGCAGCATTGATGGGGTGTCGGAGGCATCTCTGGAGACATCCCGAGAAACCTCTCAGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS TCA 72 bp CTCCTTTTCAGCTGTGTAGGCCACACCAGAGAACACTaGCACACCCACAGCCAGGTACAGCAGCAAGATGCC +
Preference number: 6 (lower is better)
Translates to: LLFSCVGHTREH*HTHSQVQQQDA
Trigger: GGCATCTTGCTGCTGTACCTGGCTGTGGGTGTGTCAGTGTTCTCTGGTGTGGCCTACACAGCTGAAAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 72 bp GGGATGTCTCCAGAGATGCCTCCGACACCCCATCAATaGTGCTCAGCAAGTCCTCAAACTCTTGGTGGTTGC +
Preference number: 6 (lower is better)
Translates to: GMSPEMPPTPHQ*CSASPQTLGGC
Trigger: GCAACCACCAAGAGTTTGAGGACTTGCTGAGCAGCATTGATGGGGTGTCGGAGGCATCTCTGGAGACATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS CCA 72 bp CATTCGTCGCCCTCTCTGGGCTTGTTTCCCTGTCTGTaGAACCGGGTAGCATCATACTTTCCAGGAGAGGCT +
Preference number: 6 (lower is better)
Translates to: HSSPSLGLFPCL*NRVASYFPGEA
Trigger: AGCCTCTCCTGGAAAGTATGATGCTACCCGGTTCCACAGACAGGGAAACAAGCCCAGAGAGGGCGACGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306117.5
CDS CCA 72 bp CCTGGTTTTAATACATCTGAGGGTGTGGAGGCTCACTaGGGGCCTGGCTCTCTAGATCTGCAGACTGTCCCT +
Preference number: 6 (lower is better)
Translates to: PGFNTSEGVEAH*GPGSLDLQTVP
Trigger: AGGGACAGTCTGCAGATCTAGAGAGCCAGGCCCCCAGTGAGCCTCCACACCCTCAGATGTATTAAAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS GCA 72 bp ATGTCTCCAGAGATGCCTCCGACACCCCATCAATGCTaGTCAGCAAGTCCTCAAACTCTTGGTGGTTGCTGT +
Preference number: 6 (lower is better)
Translates to: MSPEMPPTPHQC*SASPQTLGGCC
Trigger: ACAGCAACCACCAAGAGTTTGAGGACTTGCTGAGCAGCATTGATGGGGTGTCGGAGGCATCTCTGGAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306117.5
ENST00000537075.3
CDS TCA 72 bp TGGTCCCTGGCACATAATCAATGCACAATAAACGTGTaGTGTAGCTCCGCTCCCACCTCCACTTGGATCTCC +
Preference number: 6 (lower is better)
Translates to: WSLAHNQCTINV*CSSAPTSTWIS
Trigger: GGAGATCCAAGTGGAGGTGGGAGCGGAGCTACATCACACGTTTATTGTGCATTGATTATGTGCCAGGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306117.5
CDS TCA 72 bp GCATCATACTTTCCAGGAGAGGCTCAGAGAATTAAATaGTGCAAGGTGTTTATCGGCAGCATGGTCCCTGGC +
Preference number: 6 (lower is better)
Translates to: ASYFPGEAQRIK*CKVFIGSMVPG
Trigger: GCCAGGGACCATGCTGCCGATAAACACCTTGCATCATTTAATTCTCTGAGCCTCTCCTGGAAAGTATGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306117.5
CDS CCA 72 bp AGAGAATTAAATGATGCAAGGTGTTTATCGGCAGCATaGTCCCTGGCACATAATCAATGCACAATAAACGTG +
Preference number: 6 (lower is better)
Translates to: RELNDARCLSAA*SLAHNQCTINV
Trigger: CACGTTTATTGTGCATTGATTATGTGCCAGGGACCATGCTGCCGATAAACACCTTGCATCATTTAATTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306117.5