RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNK7 (Homo sapiens)

Ensembl gene IDs: ENSG00000173338

Ensembl transcript IDs: ENST00000340313.5, ENST00000342202.8, ENST00000394216.6, ENST00000394217.6, ENST00000525254.1, ENST00000530380.1

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTaGTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTGGTCCT +
Preference number: 1 (lower is better)
Translates to: SKQGLVLKLGPRAAG*SEPVHPALGCHLGP
Trigger: AGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAGCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR GCA 90 bp GTGACTTGCCCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCTaGCACCAGAGCTCTTCGACTACCCCTCCCACGCCGTGCCCTGGA +
Preference number: 1 (lower is better)
Translates to: VTCPGNWHHSPPSQR*HQSSSTTPPTPCPG
Trigger: TCCAGGGCACGGCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGCAAGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394216.6
3UTR CCA 90 bp TGGCCAAGAGTCCTAGAAGCAAGTAACCTGGGGAGGAGAAGGTGCTaGGGCAGCGCCTGGGTTCTGGTGATGCTCCCCGCCCACCTCCCA +
Preference number: 1 (lower is better)
Translates to: WPRVLEASNLGRRRC*GSAWVLVMLPAHLP
Trigger: TGGGAGGTGGGCGGGGAGCATCACCAGAACCCAGGCGCTGCCCCAGCACCTTCTCCTCCCCAGGTTACTTGCTTCTAGGACTCTTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
3UTR GCA 90 bp GTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTaGGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAAG +
Preference number: 1 (lower is better)
Translates to: VTGPLGLKNFPMART*GSSEKVSTASSMAK
Trigger: CTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR TCA 90 bp CTAGGATGCCACCTTGGTCCTCAGCAGTCACAGGACCACTGGGTCTaGAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGG +
Preference number: 1 (lower is better)
Translates to: LGCHLGPQQSQDHWV*RTSPWHGPAAAQRR
Trigger: CCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCAAGGTGGCATCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR CCA 90 bp CACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATaGCCAAGAGTCCTAGAAGCAAGTAACCTGGGGAGGAGAAGGTGC +
Preference number: 1 (lower is better)
Translates to: HGPAAAQRRSPLPAA*PRVLEASNLGRRRC
Trigger: GCACCTTCTCCTCCCCAGGTTACTTGCTTCTAGGACTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
3UTR CCA 90 bp GGCAGGGTGCTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTaGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCC +
Preference number: 1 (lower is better)
Translates to: GRVLRASSSCPRMPP*SSAVTGPLGLKNFP
Trigger: GGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAGCACCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR CCA 90 bp CACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATaGCCAAGAGTCCTAGAAGCAAGTAACCCCCTTCTCAACGCTGCC +
Preference number: 1 (lower is better)
Translates to: HGPAAAQRRSPLPAA*PRVLEASNPLLNAA
Trigger: GGCAGCGTTGAGAAGGGGGTTACTTGCTTCTAGGACTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394217.6
3UTR-3UTR TCA 90 bp ACGCTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGAGCAGGGGCTTGTCCTaGAGCTGGGGCCGCGGGCGG +
Preference number: 2 (lower is better)
Translates to: TLQQAGACPEAGAAGGRVSRGLS*SWGRGR
Trigger: CCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCT...CACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR CCA 90 bp CTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCTCTGCTGGGGCAGCGCCTaGGTTCTGGTGATGCTCCCC +
Preference number: 2 (lower is better)
Translates to: LQQAGACPEAGAAGGRVLCWGSA*VLVMLP
Trigger: GGGGAGCATCACCAGAACCCAGGCGCTGCCCCAGCA...GAGCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
3UTR-3UTR TCA 90 bp GTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCGCGCCTGGGTTCTGGTaGTGCTCCCCGCCCACCTCC +
Preference number: 2 (lower is better)
Translates to: VTGPLGLKNFPMARTCGSAPGFW*CSPPTS
Trigger: GGAGGTGGGCGGGGAGCATCACCAGAACCCAGGCGC...GCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
3UTR-3UTR GCA 90 bp TTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCCCAGCCACTCCTGGCTaGTTCCTCCTCAGGTGCCGC +
Preference number: 2 (lower is better)
Translates to: FPMARTCGSSEKVSTASSPATPG*FLLRCR
Trigger: GCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGCTGG...GCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR GCA 90 bp CGCAGTGACTTGCCCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCTGCCAACCCCTCCCACGCCGTaGCCTGGAGTGAGGTCCCTC +
Preference number: 2 (lower is better)
Translates to: RSDLPWQLAPLTPFSTLPTPPTP*PGVRSL
Trigger: GAGGGACCTCACTCCAGGGCACGGCGTGGGAGGGGT...TGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGCAAGTCACTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394216.6
3UTR-3UTR CCA 90 bp CTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGTGCTGGGGCAGCGCCTaGGTTCTGGTGATGCTCCCC +
Preference number: 2 (lower is better)
Translates to: LPHGTDLRQLREGLHCQQCWGSA*VLVMLP
Trigger: GGGGAGCATCACCAGAACCCAGGCGCTGCCCCAGCA...CTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
3UTR-3UTR TCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCCACCTCCCAGCGCAGTaGCTTGCCCTGGCAACTGGC +
Preference number: 2 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVHLPAQ*LALATG
Trigger: GCCAGTTGCCAGGGCAAGTCACTGCGCTGGGAGGTG...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
3UTR-3UTR GCA 90 bp ACCCCCTTCTCAACGCTGCCACCAGAGCTCTTCGACTACCCCTCCCACGCCGTGTGCTTCCTCCTCAGGTaGCGCCACCTTACGGAGCTG +
Preference number: 2 (lower is better)
Translates to: TPFSTLPPELFDYPSHAVCFLLR*RHLTEL
Trigger: CAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCA...CACGGCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394216.6
3UTR-3UTR GCA 90 bp CAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAAGCACCAGCCACTCCTGGCTaGTTCCTCCTCAGGTGCCGC +
Preference number: 2 (lower is better)
Translates to: QVPPPYGAELGHLTLQQAPATPG*FLLRCR
Trigger: GCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGCTGG...TGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR GCA 90 bp CAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAAGCACCGCGGGCGGCAGGGTaGTCAGAGCCAGTTCATCCT +
Preference number: 2 (lower is better)
Translates to: QVPPPYGAELGHLTLQQAPRAAG*SEPVHP
Trigger: AGGATGAACTGGCTCTGAGCACCCTGCCGCCCGCGG...TGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR CCA 90 bp TTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCTTCCCCAGCCACTCCTaGCTGCTTCCTCCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: FPMARTCGSSEKVSTASSFPSHS*LLPPQV
Trigger: CACCTGAGGAGGAAGCAGCCAGGAGTGGCTGGGGAA...GCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR CCA 90 bp TGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCATTCCCCAGCCACTCCTaGCTGCTTCCTCCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: WHGPAAAQRRSPLPAAWPFPSHS*LLPPQV
Trigger: CACCTGAGGAGGAAGCAGCCAGGAGTGGCTGGGGAA...TGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR TCA 90 bp ACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCCACCTTACGGAGCTaGACTCGGTCACCTGACGCT +
Preference number: 2 (lower is better)
Translates to: TSPWHGPAAAQRRSPLPAATLRS*TRSPDA
Trigger: AGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGC...TGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR TCA 90 bp GCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAAGATTAACAGTATCCTCTaGGGCCTCCCGCCCACCCTC +
Preference number: 2 (lower is better)
Translates to: ARTCGSSEKVSTASSMAKINSIL*GLPPTL
Trigger: GAGGGTGGGCGGGAGGCCTCAGAGGATACTGTTAAT...CTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR TCA 90 bp ACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAACACCTCCCAGCGCAGTaGCTTGCCCTGGCAACTGGC +
Preference number: 2 (lower is better)
Translates to: TTGSEELPHGTDLRQLREHLPAQ*LALATG
Trigger: GCCAGTTGCCAGGGCAAGTCACTGCGCTGGGAGGTG...TTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
3UTR-3UTR GCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCTGCTTCCTCCTCAGGTaGCGCCACCTTACGGAGCTG +
Preference number: 2 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVCFLLR*RHLTEL
Trigger: CAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCA...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
3UTR-3UTR GCA 90 bp GGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCTGCTTCCTCCTCAGGTaGCGCCACCTTACGGAGCTG +
Preference number: 2 (lower is better)
Translates to: GLKNFPMARTCGSSEKVSCFLLR*RHLTEL
Trigger: CAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCA...GGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR CCA 90 bp CAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAAGCATTCCCCAGCCACTCCTaGCTGCTTCCTCCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: QVPPPYGAELGHLTLQQAFPSHS*LLPPQV
Trigger: CACCTGAGGAGGAAGCAGCCAGGAGTGGCTGGGGAA...TGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR CCA 90 bp AGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGTTCCCCAGCCACTCCTaGCTGCTTCCTCCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: SHRTTGSEELPHGTDLRQFPSHS*LLPPQV
Trigger: CACCTGAGGAGGAAGCAGCCAGGAGTGGCTGGGGAA...CTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR TCA 90 bp TGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGGCCACCTTACGGAGCTaGACTCGGTCACCTGACGCT +
Preference number: 2 (lower is better)
Translates to: WSSAVTGPLGLKNFPMARATLRS*TRSPDA
Trigger: AGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGC...CCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR CCA 90 bp CAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAAGCAACTTGCCCTGGCAACTaGCACCACTCACCCCCTTCT +
Preference number: 2 (lower is better)
Translates to: QVPPPYGAELGHLTLQQATCPGN*HHSPPS
Trigger: AGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGCAAGT...TGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
3UTR-3UTR CCA 90 bp CCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAAGCAGGGGCTTGTCGCAGTGACTTGCCCTaGCAACTGGCACCACTCACC +
Preference number: 2 (lower is better)
Translates to: PPYGAELGHLTLQQAGACRSDLP*QLAPLT
Trigger: GGTGAGTGGTGCCAGTTGCCAGGGCAAGTCACTGCG...ACAAGCCCCTGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
3UTR-3UTR CCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCCCACTGCCAGCAGCATaGCCAAGAGTCCTAGAAGCA +
Preference number: 2 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVPLPAA*PRVLEA
Trigger: TGCTTCTAGGACTCTTGGCCATGCTGCTGGCAGTGG...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
3UTR-3UTR CCA 90 bp CTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTCCACTGCCAGCAGCATaGCCAAGAGTCCCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: LKNFPMARTCGSSEKVSTPLPAA*PRVPLL
Trigger: GAGAAGGGGGACTCTTGGCCATGCTGCTGGCAGTGG...AGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525254.1
3UTR-3UTR TCA 90 bp TCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCCAGGACCACTGGGTCTaGAGAACTTCCCCATGGCAC +
Preference number: 2 (lower is better)
Translates to: SSAVTGPLGLKNFPMARTQDHWV*RTSPWH
Trigger: GTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTG...GGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR GCA 90 bp CAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAAGCAAGAGAAGGTCTCCACTaGCAGCAGCATGGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: QVPPPYGAELGHLTLQQAREGLH*QQHGQE
Trigger: CTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCT...TGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR GCA 90 bp CCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAAGCAGGGGCTTGTCATCCTGCCCTAGGATaGCACCTTGGTCCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: PPYGAELGHLTLQQAGACHPALG*HLGPQQ
Trigger: CTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATG...ACAAGCCCCTGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR-3UTR CCA 90 bp AGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCCACTGCCAGCAGCATaGCCAAGAGTCCTAGAAGCA +
Preference number: 2 (lower is better)
Translates to: SHRTTGSEELPHGTDLRQPLPAA*PRVLEA
Trigger: TGCTTCTAGGACTCTTGGCCATGCTGCTGGCAGTGG...CTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
3UTR-3UTR TCA 90 bp GCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAAGTCGTTGCTCATTTTATaGTTAACAGTATCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: ARTCGSSEKVSTASSMAKSLLIL*LTVSSE
Trigger: CTCAGAGGATACTGTTAATCATAAAATGAGCAACGA...CTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
3UTR-3UTR TCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCTCGTTGCTCATTTTATaGTTAACAGTATCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVSLLIL*LTVSSE
Trigger: CTCAGAGGATACTGTTAATCATAAAATGAGCAACGA...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
3UTR GCA 72 bp GGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTaGTCAGAGCCAGTTCATCCTGCCCTAGGATGCCAC +
Preference number: 3 (lower is better)
Translates to: GLVLKLGPRAAG*SEPVHPALGCH
Trigger: GTGGCATCCTAGGGCAGGATGAACTGGCTCTGAGCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR GCA 72 bp TGCCACCAGAGCTCTTCGACTACCCCTCCCACGCCGTaGCCTGGAGTGAGGTCCCTCCACCTGCAAGGCCCA +
Preference number: 3 (lower is better)
Translates to: CHQSSSTTPPTP*PGVRSLHLQGP
Trigger: TGGGCCTTGCAGGTGGAGGGACCTCACTCCAGGGCACGGCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394216.6
3UTR GCA 72 bp GCCGCGGGCGGCAGGGTGCTCAGAGCCAGTTCATCCTaGCCTAGGATGCCACCTTGGTCCTCAGCAGTCACA +
Preference number: 3 (lower is better)
Translates to: AAGGRVLRASSS*PRMPPWSSAVT
Trigger: TGTGACTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAGCACCCTGCCGCCCGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR GCA 72 bp CCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCTaGCACCAGAGCTCTTCGACTACCCCTCCCACGCCG +
Preference number: 3 (lower is better)
Translates to: PGNWHHSPPSQR*HQSSSTTPPTP
Trigger: CGGCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394216.6
3UTR GCA 72 bp GGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTaGCAGCAGCATGGCCAAGAGTCCCCCTTCTCAACG +
Preference number: 3 (lower is better)
Translates to: GTDLRQLREGLH*QQHGQESPFST
Trigger: CGTTGAGAAGGGGGACTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525254.1
3UTR-3UTR CAA 90 bp CAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAAGCATCCCAGCGCAGTGACTaGCCCTGGCAACTGGCACCA +
Preference number: 3 (lower is better)
Translates to: QVPPPYGAELGHLTLQQASQRSD*PWQLAP
Trigger: TGGTGCCAGTTGCCAGGGCAAGTCACTGCGCTGGGA...TGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
3UTR GCA 72 bp CCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTaGGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: PLGLKNFPMART*GSSEKVSTASS
Trigger: GCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR TCA 72 bp CACCTTGGTCCTCAGCAGTCACAGGACCACTGGGTCTaGAGAACTTCCCCATGGCACGGACCTGCGGCAGCT +
Preference number: 3 (lower is better)
Translates to: HLGPQQSQDHWV*RTSPWHGPAAA
Trigger: AGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR TCA 72 bp AGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTaGCGCTTCAGCAAGCAGGGGCTTGTCCTGAAGCTG +
Preference number: 3 (lower is better)
Translates to: RCRHLTELNSVT*RFSKQGLVLKL
Trigger: CAGCTTCAGGACAAGCCCCTGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
3UTR CCA 72 bp GCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATaGCCAAGAGTCCTAGAAGCAAGTAACCTGGGGAGG +
Preference number: 3 (lower is better)
Translates to: AAAQRRSPLPAA*PRVLEASNLGR
Trigger: CCTCCCCAGGTTACTTGCTTCTAGGACTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
3UTR CCA 72 bp CTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTaGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAG +
Preference number: 3 (lower is better)
Translates to: LRASSSCPRMPP*SSAVTGPLGLK
Trigger: CTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp CGCTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCAGCAGGGGCTTGTCCTaGAGCTGGGGCCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: RFSKQGLVLKLGPRAAGCSRGLS*SWGRGR
Trigger: CCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCT...GCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp ACGCTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCCCAGTGCAACTGCCTaGAGCAGCGCAGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TLQQAGACPEAGAAGGRVPSATA*SSAALA
Trigger: GGCCAGGGCTGCGCTGCTGCAGGCAGTTGCACTGGG...CACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CGCTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCTCCCACGCCGTGCCCTaGAGTGAGGTCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RFSKQGLVLKLGPRAAGCSHAVP*SEVPPP
Trigger: TGGTGGAGGGACCTCACTCCAGGGCACGGCGTGGGA...GCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp ACGCTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGGGAGGAGGTGCTGTGTaGGTGGCTGGGACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TLQQAGACPEAGAAGGRVGGGAV*VAGTRL
Trigger: CAGCCGGGTCCCAGCCACCCACACAGCACCTCCTCC...CACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp CTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCTCAGGCACGTGGGCGGCTaGGCACAGGCAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LQQAGACPEAGAAGGRVLRHVGG*AQAAGN
Trigger: ATTGCCTGCTGCCTGTGCTCAGCCGCCCACGTGCCT...GAGCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp GGGCAGCGCCTGGGTTCTGGTGATGCTCCCCGCCCACCTCCCAGCGCAGTGACTCACCTCCCAGCGCAGTaGCTTGCCCTGGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: GQRLGSGDAPRPPPSAVTHLPAQ*LALATG
Trigger: GCCAGTTGCCAGGGCAAGTCACTGCGCTGGGAGGTG...AGTCACTGCGCTGGGAGGTGGGCGGGGAGCATCACCAGAACCCAGGCGCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR GCA 90 bp CTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCTCGGGTGGCCAGGGCAGTaGCCAGCAGCTCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LQQAGACPEAGAAGGRVLGWPGQ*PAALPE
Trigger: CTCTGGAAGAGCTGCTGGGCACTGCCCTGGCCACCC...GAGCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp TGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCACGGCCCCCAGCAGGCTaGAGTCGCCCTGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: WHGPAAAQRRSPLPAAWPRPPAG*SRPEGP
Trigger: GGGGCCTTCAGGGCGACTGCAGCCTGCTGGGGGCCG...TGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp ATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCCGGCCCCCAGCAGGCTaGAGTCGCCCTGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: MARTCGSSEKVSTASSMARPPAG*SRPEGP
Trigger: GGGGCCTTCAGGGCGACTGCAGCCTGCTGGGGGCCG...GGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp CGCTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCCCCATGGCACGGACCTaGGGCAGCTCAGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RFSKQGLVLKLGPRAAGCPMART*GSSEKV
Trigger: GACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGG...GCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp CGCTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCCTGGGATGGCTGGGGTaGCTGGGGTGTGAACAGGAG +
Preference number: 4 (lower is better)
Translates to: RFSKQGLVLKLGPRAAGCLGWLG*LGCEQE
Trigger: CTCCTGTTCACACCCCAGCCACCCCAGCCATCCCAG...GCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCTCGGGTGCTGTGGGAACTaGCGGCTCCACCTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LQQAGACPEAGAAGGRVLGCCGN*RLHLRH
Trigger: GTGCCTGAGGTGGAGCCGCCAGTTCCCACAGCACCC...GAGCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTAGCAGGGGCTTGTCCTaGAGCTGGGGCCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGSRGLS*SWGRGR
Trigger: CCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCT...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR TCA 90 bp AACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCAGGGGCTTGTCCTaGAGCTGGGGCCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: NFPMARTCGSSEKVSTASSRGLS*SWGRGR
Trigger: CCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCT...GCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCAGCAGGGGCTTGTCCTaGAGCTGGGGCCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVSRGLS*SWGRGR
Trigger: CCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCT...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR TCA 90 bp CGCTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCGCCACCTTACGGAGCTaGACTCGGTCACCTGACGCT +
Preference number: 4 (lower is better)
Translates to: RFSKQGLVLKLGPRAAGCATLRS*TRSPDA
Trigger: AGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGC...GCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp TCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCGGCCCCCAGCAGGCTaGAGTCGCCCTGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SWLLPPQVPPPYGAELGHRPPAG*SRPEGP
Trigger: GGGGCCTTCAGGGCGACTGCAGCCTGCTGGGGGCCG...GTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGTCCACCTCAGGCACCTaGGAGGGGCTGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LPHGTDLRQLREGLHCQQSTSGT*EGLGRA
Trigger: CGCCCTGCCCAGCCCCTCCCAGGTGCCTGAGGTGGA...CTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp CCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCAGGCTGCAGTCGCCCTaGAGGCCCCACAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PGCFLLRCRHLTELNSVTRLQSP*RPHSTS
Trigger: GCTGGTGCTGTGGGGCCTTCAGGGCGACTGCAGCCT...GGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGAGGCTGCAGTCGCCCTaGAGGCCCCACAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSRLQSP*RPHSTS
Trigger: GCTGGTGCTGTGGGGCCTTCAGGGCGACTGCAGCCT...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp CGCTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCCAGGACCACTGGGTCTaGAGAACTTCCCCATGGCAC +
Preference number: 4 (lower is better)
Translates to: RFSKQGLVLKLGPRAAGCQDHWV*RTSPWH
Trigger: GTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTG...GCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp CTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCTCCTGAACTCGGTCACCTaGCGCTTCAGCAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LQQAGACPEAGAAGGRVLLNSVT*RFSKQG
Trigger: CCCCTGCTTGCTGAAGCGTCAGGTGACCGAGTTCAG...GAGCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp ACGCTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGGCCACCTTACGGAGCTaGACTCGGTCACCTGACGCT +
Preference number: 4 (lower is better)
Translates to: TLQQAGACPEAGAAGGRVATLRS*TRSPDA
Trigger: AGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGC...CACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGCCCAGTGCAACTGCCTaGAGCAGCGCAGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSPSATA*SSAALA
Trigger: GGCCAGGGCTGCGCTGCTGCAGGCAGTTGCACTGGG...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp GGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAAACCCCTCCCACGCCGTaGCCTGGAGTGAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GTDLRQLREGLHCQQHGQTPPTP*PGVRSL
Trigger: GAGGGACCTCACTCCAGGGCACGGCGTGGGAGGGGT...TTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGCCCAGGGCCAGCAAGTaGGCCACAACCAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSPRASK*ATTRSP
Trigger: CGGGCTCCTGGTTGTGGCCCACTTGCTGGCCCTGGG...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCGCTACCCAGGCACGTaGGCGGCTGAGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: LPHGTDLRQLREGLHCQQRYPGT*AAEHRQ
Trigger: CTGCCTGTGCTCAGCCGCCCACGTGCCTGGGTAGCG...CTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp TGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCACGCTACCCAGGCACGTaGGCGGCTGAGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: WHGPAAAQRRSPLPAAWPRYPGT*AAEHRQ
Trigger: CTGCCTGTGCTCAGCCGCCCACGTGCCTGGGTAGCG...TGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGCAGCAGCGCAGCCCTaGCCGGTGACAGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSAAAQP*PVTAAS
Trigger: ACTGGCAGCTGTCACCGGCCAGGGCTGCGCTGCTGC...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp ATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCGCAGCAGCGCAGCCCTaGCCGGTGACAGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: MARTCGSSEKVSTASSMAAAAQP*PVTAAS
Trigger: ACTGGCAGCTGTCACCGGCCAGGGCTGCGCTGCTGC...GGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGCCCATGGCAGGCCGCTaGGGTGCTGTGGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSPMAGR*GAVGTG
Trigger: GCCAGTTCCCACAGCACCCCAGCGGCCTGCCATGGG...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGCCCGGCTGGGATGGCTaGGGTGGCTGGGGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: PMARTCGSSEKVSTASSMPGWDG*GGWGVN
Trigger: GTTCACACCCCAGCCACCCCAGCCATCCCAGCCGGG...CATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp ACTCACCCCCTTCTCAACGCTGCCACCAGAGCTCTTCGACTACCCCTCCCACGCGGGACCCGGCTGGGATaGCTGGGGTGGCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: THPLLNAATRALRLPLPRGTRLG*LGWLGC
Trigger: ACACCCCAGCCACCCCAGCCATCCCAGCCGGGTCCC...GCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR CCA 90 bp GCAGTGACTTGCCCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCTGCCACTGGCTGGGACCCGGCTaGGATGGCTGGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: AVTCPGNWHHSPPSQRCHWLGPG*DGWGGW
Trigger: CCAGCCACCCCAGCCATCCCAGCCGGGTCCCAGCCA...GTGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGCAAGTCACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR TCA 90 bp CCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCCCAGGTCCTGCCCTCTaGGCTGTTGCCCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PGCFLLRCRHLTELNSVTPGPAL*AVAQGG
Trigger: TCCACCCTGGGCAACAGCTCAGAGGGCAGGACCTGG...GGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp ATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCCCAGGTCCTGCCCTCTaGGCTGTTGCCCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: MARTCGSSEKVSTASSMAPGPAL*AVAQGG
Trigger: TCCACCCTGGGCAACAGCTCAGAGGGCAGGACCTGG...GGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp CGCTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCCATAACCTGTGGTGGTaGGGATGCTGGCAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: RFSKQGLVLKLGPRAAGCHNLWW*GCWQRR
Trigger: TCTTCGCTGCCAGCATCCTCACCACCACAGGTTATG...GCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp ACCCCCTTCTCAACGCTGCCACCAGAGCTCTTCGACTACCCCTCCCACGCCGTGAGGCACGTGGGCGGCTaGGCACAGGCAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: TPFSTLPPELFDYPSHAVRHVGG*AQAAGN
Trigger: ATTGCCTGCTGCCTGTGCTCAGCCGCCCACGTGCCT...CACGGCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR TCA 90 bp GAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGAGGCTGCAGTCGCCCTaGAGGCCCCACAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: ELPHGTDLRQLREGLHCQRLQSP*RPHSTS
Trigger: GCTGGTGCTGTGGGGCCTTCAGGGCGACTGCAGCCT...CTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp ACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAAGAGAGGCTGCAGTCGCCCTaGAGGCCCCACAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: TDLRQLREGLHCQQHGQERLQSP*RPHSTS
Trigger: GCTGGTGCTGTGGGGCCTTCAGGGCGACTGCAGCCT...CTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp TCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCAGCAGGGGCTTGTCCTaGAGCTGGGGCCGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: SSAVTGPLGLKNFPMARTSRGLS*SWGRGR
Trigger: CCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCT...GGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp TTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCCACCTCCCAGCGCAGTaGCTTGCCCTGGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: FPMARTCGSSEKVSTASSHLPAQ*LALATG
Trigger: GCCAGTTGCCAGGGCAAGTCACTGCGCTGGGAGGTG...GCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR TCA 90 bp AAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCGCGCCTGGGTTCTGGTaGTGCTCCCCGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: KNFPMARTCGSSEKVSTAAPGFW*CSPPTS
Trigger: GGAGGTGGGCGGGGAGCATCACCAGAACCCAGGCGC...GGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR TCA 90 bp GGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCGCGCCTGGGTTCTGGTaGTGCTCCCCGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GLKNFPMARTCGSSEKVSAPGFW*CSPPTS
Trigger: GGAGGTGGGCGGGGAGCATCACCAGAACCCAGGCGC...GGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR GCA 90 bp TCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCCGGCCCCCAGCAGGCTaGAGTCGCCCTGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SAVTGPLGLKNFPMARTCRPPAG*SRPEGP
Trigger: GGGGCCTTCAGGGCGACTGCAGCCTGCTGGGGGCCG...GCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp CCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCCCGCGGGCGGCAGGGTaGTCAGAGCCAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: PGCFLLRCRHLTELNSVTPRAAG*SEPVHP
Trigger: AGGATGAACTGGCTCTGAGCACCCTGCCGCCCGCGG...GGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp ACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAACCCCTCCCACGCCGTaGCCTGGAGTGAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TSPWHGPAAAQRRSPLPATPPTP*PGVRSL
Trigger: GAGGGACCTCACTCCAGGGCACGGCGTGGGAGGGGT...TGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp ACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCACCCAGGGCCAGCAAGTaGGCCACAACCAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: TSPWHGPAAAQRRSPLPAPRASK*ATTRSP
Trigger: CGGGCTCCTGGTTGTGGCCCACTTGCTGGCCCTGGG...TGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp GAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCCCAGGGCCAGCAAGTaGGCCACAACCAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: ELPHGTDLRQLREGLHCQPRASK*ATTRSP
Trigger: CGGGCTCCTGGTTGTGGCCCACTTGCTGGCCCTGGG...CTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCAGCTGTTGCCCAGGGTaGAGACCCCATGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PGCFLLRCRHLTELNSVTSCCPG*RPHGPG
Trigger: CCCAGGCCCATGGGGTCTCCACCCTGGGCAACAGCT...GGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCGCTACCCAGGCACGTaGGCGGCTGAGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGRYPGT*AAEHRQ
Trigger: CTGCCTGTGCTCAGCCGCCCACGTGCCTGGGTAGCG...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCGCAGCAGCGCAGCCCTaGCCGGTGACAGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVAAAQP*PVTAAS
Trigger: ACTGGCAGCTGTCACCGGCCAGGGCTGCGCTGCTGC...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CGCTTCAGCAAGCAGGGGCTTGTCCTGAAGCTGGGGCCGCGGGCGGCAGGGTGCCCTAGGATGCCACCTTaGTCCTCAGCAGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: RFSKQGLVLKLGPRAAGCPRMPP*SSAVTG
Trigger: TCCTGTGACTGCTGAGGACCAAGGTGGCATCCTAGG...GCACCCTGCCGCCCGCGGCCCCAGCTTCAGGACAAGCCCCTGCTTGCTGAAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp TCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCCCATGGCAGGCCGCTaGGGTGCTGTGGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: SWLLPPQVPPPYGAELGHPMAGR*GAVGTG
Trigger: GCCAGTTCCCACAGCACCCCAGCGGCCTGCCATGGG...GTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp GAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCCCATGGCAGGCCGCTaGGGTGCTGTGGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: ELPHGTDLRQLREGLHCQPMAGR*GAVGTG
Trigger: GCCAGTTCCCACAGCACCCCAGCGGCCTGCCATGGG...CTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp GCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAAGTCCCACGCCGTGCCCTaGAGTGAGGTCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: ARTCGSSEKVSTASSMAKSHAVP*SEVPPP
Trigger: TGGTGGAGGGACCTCACTCCAGGGCACGGCGTGGGA...CTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp GCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCCCCGGCTGGGATGGCTaGGGTGGCTGGGGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: AVTGPLGLKNFPMARTCGPGWDG*GGWGVN
Trigger: GTTCACACCCCAGCCACCCCAGCCATCCCAGCCGGG...GCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp AGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGTGGCTGGGACCCGGCTaGGATGGCTGGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSHRTTGSEELPHGTDLRWLGPG*DGWGGW
Trigger: CCAGCCACCCCAGCCATCCCAGCCGGGTCCCAGCCA...CCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGAGGTGCTGTGTGGGTaGCTGGGACCCGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSEVLCG*LGPGWD
Trigger: ATCCCAGCCGGGTCCCAGCCACCCACACAGCACCTC...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp ACTCACCCCCTTCTCAACGCTGCCACCAGAGCTCTTCGACTACCCCTCCCACGCGGAGGAGGTGCTGTGTaGGTGGCTGGGACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: THPLLNAATRALRLPLPRGGGAV*VAGTRL
Trigger: CAGCCGGGTCCCAGCCACCCACACAGCACCTCCTCC...GCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR CCA 90 bp CTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACCTCAGGCACCTaGGAGGGGCTGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LGLKNFPMARTCGSSEKVSTSGT*EGLGRA
Trigger: CGCCCTGCCCAGCCCCTCCCAGGTGCCTGAGGTGGA...GACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp GCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAAGTCCCACGCCGTGCCCTaGAGTGAGGTCCCTCCACCT +
Preference number: 4 (lower is better)
Translates to: ARTCGSSEKVSTASSMAKSHAVP*SEVPPP
Trigger: AGGTGGAGGGACCTCACTCCAGGGCACGGCGTGGGA...CTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR TCA 90 bp ACTCACCCCCTTCTCAACGCTGCCACCAGAGCTCTTCGACTACCCCTCCCACGCCCAGGTCCTGCCCTCTaGGCTGTTGCCCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: THPLLNAATRALRLPLPRPGPAL*AVAQGG
Trigger: TCCACCCTGGGCAACAGCTCAGAGGGCAGGACCTGG...GCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGTGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR TCA 90 bp CCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCAGCGAAGAGCAGGGCTaGGGGAAGGTCCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PGCFLLRCRHLTELNSVTSEEQG*GKVPGP
Trigger: AGGACCTGGGACCTTCCCTCAGCCCTGCTCTTCGCT...GGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTAGGCACGTGGGCGGCTaGGCACAGGCAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGRHVGG*AQAAGN
Trigger: ATTGCCTGCTGCCTGTGCTCAGCCGCCCACGTGCCT...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp GTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCAGGCACGTGGGCGGCTaGGCACAGGCAGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: VTGPLGLKNFPMARTCGSRHVGG*AQAAGN
Trigger: ATTGCCTGCTGCCTGTGCTCAGCCGCCCACGTGCCT...GCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCGCCGTGCCCTGGAGTaGGGTCCCTCCACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGRRALE*GPSTKK
Trigger: CTTCTTGGTGGAGGGACCTCACTCCAGGGCACGGCG...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp GAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCGCCGTGCCCTGGAGTaGGGTCCCTCCACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: ELPHGTDLRQLREGLHCQRRALE*GPSTKK
Trigger: CTTCTTGGTGGAGGGACCTCACTCCAGGGCACGGCG...CTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp ACTGGCACCACTCACCCCCTTCTCAACGCTGCCACCAGAGCTCTTCGACTACCCCGCCGTGCCCTGGAGTaGGGTCCCTCCACCTGCAAG +
Preference number: 4 (lower is better)
Translates to: TGTTHPLLNAATRALRLPRRALE*GPSTCK
Trigger: CTTGCAGGTGGAGGGACCTCACTCCAGGGCACGGCG...GGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR GCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTAGCCTGAAGCCTGCATaGAGGAGGCCCCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGSLKPA*RRPLQG
Trigger: GCCCTGGAGGGGCCTCCTGCATGCAGGCTTCAGGCT...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp GCCCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCTGCCACCAGAGCTCTTAGCCTGAAGCCTGCATaGAGGAGGCCCCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALATGTTHPLLNAATRALSLKPA*RRPLQG
Trigger: GCCCTGGAGGGGCCTCCTGCATGCAGGCTTCAGGCT...AAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR GCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCGGCAGGCAGGCCCTATaGTCTGCCTGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVGRQAL*SAWKAA
Trigger: GGCAGCCTTCCAGGCAGAGCATAGGGCCTGCCTGCC...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTGGCAGGCAGGCCCTATaGTCTGCCTGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGGRQAL*SAWKAA
Trigger: GGCAGCCTTCCAGGCAGAGCATAGGGCCTGCCTGCC...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp TCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACGGGTGGCCAGGGCAGTaGCCAGCAGCTCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SWLLPPQVPPPYGAELGHGWPGQ*PAALPE
Trigger: CTCTGGAAGAGCTGCTGGGCACTGCCCTGGCCACCC...GTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp GTGACTTGCCCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCTGCCACCAGGGGTGGCCAGGGCAGTaGCCAGCAGCTCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VTCPGNWHHSPPSQRCHQGWPGQ*PAALPE
Trigger: CTCTGGAAGAGCTGCTGGGCACTGCCCTGGCCACCC...CTGGTGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGCAAGTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR GCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCTGGCCGGTGACAGCTaGCAGTGGACCGCTACCCAG +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGLAGDS*QWTATQ
Trigger: CTGGGTAGCGGTCCACTGGCAGCTGTCACCGGCCAG...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp ACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAAGAGCTGGCCGGTGACAGCTaGCAGTGGACCGCTACCCAG +
Preference number: 4 (lower is better)
Translates to: TDLRQLREGLHCQQHGQELAGDS*QWTATQ
Trigger: CTGGGTAGCGGTCCACTGGCAGCTGTCACCGGCCAG...CTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp AGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCCCAGTGCAACTGCCTaGAGCAGCGCAGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SHRTTGSEELPHGTDLRQPSATA*SSAALA
Trigger: GGCCAGGGCTGCGCTGCTGCAGGCAGTTGCACTGGG...CTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGCACCAGCAGTCCCAGTaGAACTGCCTGCAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSHQQSQ*NCLQQR
Trigger: GCGCTGCTGCAGGCAGTTGCACTGGGACTGCTGGTG...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGCCCATGGCACGGACCTaGGGCAGCTCAGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSPMART*GSSEKV
Trigger: GACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGG...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCCGCGGGCGGCAGGGTaGTCAGAGCCAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGPRAAG*SEPVHP
Trigger: AGGATGAACTGGCTCTGAGCACCCTGCCGCCCGCGG...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp TCCCAGCGCAGTGACTTGCCCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCCGCGGGCGGCAGGGTaGTCAGAGCCAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: SQRSDLPWQLAPLTPFSTPRAAG*SEPVHP
Trigger: AGGATGAACTGGCTCTGAGCACCCTGCCGCCCGCGG...CGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGCAAGTCACTGCGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR GCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCCCGCGGGCGGCAGGGTaGTCAGAGCCAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVPRAAG*SEPVHP
Trigger: AGGATGAACTGGCTCTGAGCACCCTGCCGCCCGCGG...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCCCAGCCACTCCTGGCTaGTTCCTCCTCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVPATPG*FLLRCR
Trigger: GCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGCTGG...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCCAGCCACTCCTGGCTaGTTCCTCCTCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGPATPG*FLLRCR
Trigger: GCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGCTGG...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp GGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACCCCTCCCACGCCGTaGCCTGGAGTGAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GLKNFPMARTCGSSEKVSTPPTP*PGVRSL
Trigger: GAGGGACCTCACTCCAGGGCACGGCGTGGGAGGGGT...GGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp CCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAACCCAGGGCCAGCAAGTaGGCCACAACCAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: PQVPPPYGAELGHLTLQQPRASK*ATTRSP
Trigger: CGGGCTCCTGGTTGTGGCCCACTTGCTGGCCCTGGG...TTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp ACCCCCTTCTCAACGCTGCCACCAGAGCTCTTCGACTACCCCTCCCACGCCGTGGGCAATGGCGCAGGGTaGCCACGAGAGCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: TPFSTLPPELFDYPSHAVGNGAG*PRELRR
Trigger: CCTCCTTAGCTCTCGTGGCCACCCTGCGCCATTGCC...CACGGCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR CCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGACAGGCAGCAGGCAATaGCGCAGGGTGGCCACGAGA +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSTGSRQ*RRVATR
Trigger: TCTCGTGGCCACCCTGCGCCATTGCCTGCTGCCTGT...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGACAGGCAGCAGGCAATaGCGCAGGGTGGCCACGAGA +
Preference number: 4 (lower is better)
Translates to: LPHGTDLRQLREGLHCQQTGSRQ*RRVATR
Trigger: TCTCGTGGCCACCCTGCGCCATTGCCTGCTGCCTGT...CTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGACAGGCAGCAGGCAATaGCGCAGGGTGGCCACGAGA +
Preference number: 4 (lower is better)
Translates to: PMARTCGSSEKVSTASSMTGSRQ*RRVATR
Trigger: TCTCGTGGCCACCCTGCGCCATTGCCTGCTGCCTGT...CATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCGGTGACAGCTGCCAGTaGACCGCTACCCAGGCACGT +
Preference number: 4 (lower is better)
Translates to: PGCFLLRCRHLTELNSVTGDSCQ*TATQAR
Trigger: ACGTGCCTGGGTAGCGGTCCACTGGCAGCTGTCACC...GGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGCTGAACTCGGTCACCTaGCGCTTCAGCAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSLNSVT*RFSKQG
Trigger: CCCCTGCTTGCTGAAGCGTCAGGTGACCGAGTTCAG...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR TCA 90 bp AAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCCGCCGTGCCCTGGAGTaGGGTCCCTCCACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: KNFPMARTCGSSEKVSTARRALE*GPSTKK
Trigger: CTTCTTGGTGGAGGGACCTCACTCCAGGGCACGGCG...GGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTGCTCAGCCTGAAGCCTaGATGCAGGAGGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGAQPEA*MQEAPP
Trigger: TGGAGGGGCCTCCTGCATGCAGGCTTCAGGCTGAGC...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGAAGGCTGCCAGCTCTaGCCTGAGCTCAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSEGCQL*PELSLK
Trigger: CTTCAGGCTGAGCTCAGGGCAGAGCTGGCAGCCTTC...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp GGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCGGCAGGCAGGCCCTATaGTCTGCCTGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLKNFPMARTCGSSEKVSGRQAL*SAWKAA
Trigger: GGCAGCCTTCCAGGCAGAGCATAGGGCCTGCCTGCC...GGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCAGTCCCAGTGCAACTaGCTGCAGCAGCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGQSQCN*LQQRSP
Trigger: AGGGCTGCGCTGCTGCAGGCAGTTGCACTGGGACTG...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp TCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCAGTCCCAGTGCAACTaGCTGCAGCAGCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SWLLPPQVPPPYGAELGHQSQCN*LQQRSP
Trigger: AGGGCTGCGCTGCTGCAGGCAGTTGCACTGGGACTG...GTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp ACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCACAGTCCCAGTGCAACTaGCTGCAGCAGCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: TSPWHGPAAAQRRSPLPAQSQCN*LQQRSP
Trigger: AGGGCTGCGCTGCTGCAGGCAGTTGCACTGGGACTG...TGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp CACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCCAGTCCCAGTGCAACTaGCTGCAGCAGCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: HRTTGSEELPHGTDLRQLQSQCN*LQQRSP
Trigger: AGGGCTGCGCTGCTGCAGGCAGTTGCACTGGGACTG...GAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp GAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCACCAGCAGTCCCAGTaGAACTGCCTGCAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: ELPHGTDLRQLREGLHCQHQQSQ*NCLQQR
Trigger: GCGCTGCTGCAGGCAGTTGCACTGGGACTGCTGGTG...CTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCCCCATGGCACGGACCTaGGGCAGCTCAGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVPMART*GSSEKV
Trigger: GACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGG...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp ACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAAGAGCCCATGGCACGGACCTaGGGCAGCTCAGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TDLRQLREGLHCQQHGQEPMART*GSSEKV
Trigger: GACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGG...CTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp TCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCCCATGGCACGGACCTaGGGCAGCTCAGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SWLLPPQVPPPYGAELGHPMART*GSSEKV
Trigger: GACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGG...GTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp CCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAACCGCGGGCGGCAGGGTaGTCAGAGCCAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: PQVPPPYGAELGHLTLQQPRAAG*SEPVHP
Trigger: AGGATGAACTGGCTCTGAGCACCCTGCCGCCCGCGG...TTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGTGCTTCCTCCTCAGGTaGCGCCACCTTACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSCFLLR*RHLTEL
Trigger: CAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCA...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp GGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAATGCTTCCTCCTCAGGTaGCGCCACCTTACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GTDLRQLREGLHCQQHGQCFLLR*RHLTEL
Trigger: CAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCA...TTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp TTCTCAACGCTGCCACCAGAGCTCTTCGACTACCCCTCCCACGCCGTGCCCTGGTGCTTCCTCCTCAGGTaGCGCCACCTTACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FSTLPPELFDYPSHAVPWCFLLR*RHLTEL
Trigger: CAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCA...CCAGGGCACGGCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR GCA 90 bp GCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAAGTGCTTCCTCCTCAGGTaGCGCCACCTTACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ARTCGSSEKVSTASSMAKCFLLR*RHLTEL
Trigger: CAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCA...CTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp CTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGTGCTTCCTCCTCAGGTaGCGCCACCTTACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LPHGTDLRQLREGLHCQQCFLLR*RHLTEL
Trigger: CAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCA...CTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp CCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGCTTCCTCCTCAGGTaGCGCCACCTTACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PGCFLLRCRHLTELNSVTCFLLR*RHLTEL
Trigger: CAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCA...GGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp CCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGCCAGCCACTCCTGGCTaGTTCCTCCTCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: PLGLKNFPMARTCGSSEKPATPG*FLLRCR
Trigger: GCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGCTGG...CTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp CCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAACCAGCCACTCCTGGCTaGTTCCTCCTCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: PQVPPPYGAELGHLTLQQPATPG*FLLRCR
Trigger: GCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGCTGG...TTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGCCCTCCACCAAGAAGTaGGAGCTGGCCCAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSPSTKK*ELAQVV
Trigger: TACCACCTGGGCCAGCTCGCACTTCTTGGTGGAGGG...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp TCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCACCCCTCCCACGCCGTaGCCTGGAGTGAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: SAVTGPLGLKNFPMARTCTPPTP*PGVRSL
Trigger: GAGGGACCTCACTCCAGGGCACGGCGTGGGAGGGGT...GCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp TCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACGGCAATGGCGCAGGGTaGCCACGAGAGCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SWLLPPQVPPPYGAELGHGNGAG*PRELRR
Trigger: CCTCCTTAGCTCTCGTGGCCACCCTGCGCCATTGCC...GTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCGGCAATGGCGCAGGGTaGCCACGAGAGCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: HRTTGSEELPHGTDLRQLGNGAG*PRELRR
Trigger: CCTCCTTAGCTCTCGTGGCCACCCTGCGCCATTGCC...GAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAAGCAGGGGCTTGTCGCTACCCAGGCACGTaGGCGGCTGAGCACAGGCAG +
Preference number: 4 (lower is better)
Translates to: PPYGAELGHLTLQQAGACRYPGT*AAEHRQ
Trigger: CTGCCTGTGCTCAGCCGCCCACGTGCCTGGGTAGCG...ACAAGCCCCTGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCGGTGACAGCTGCCAGTaGACCGCTACCCAGGCACGT +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVGDSCQ*TATQAR
Trigger: ACGTGCCTGGGTAGCGGTCCACTGGCAGCTGTCACC...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp TCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACGCAGCAGCGCAGCCCTaGCCGGTGACAGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SEELPHGTDLRQLREGLHAAAQP*PVTAAS
Trigger: ACTGGCAGCTGTCACCGGCCAGGGCTGCGCTGCTGC...GTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGCCACAGCACCAGCGCTaGCAGCAGCACAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSPQHQR*QQHKAA
Trigger: AGCAGCTTTGTGCTGCTGCCAGCGCTGGTGCTGTGG...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp GGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAACCACAGCACCAGCGCTaGCAGCAGCACAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GTDLRQLREGLHCQQHGQPQHQR*QQHKAA
Trigger: AGCAGCTTTGTGCTGCTGCCAGCGCTGGTGCTGTGG...TTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGTTCCCCAGCCACTCCTaGCTGCTTCCTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PMARTCGSSEKVSTASSMFPSHS*LLPPQV
Trigger: CACCTGAGGAGGAAGCAGCCAGGAGTGGCTGGGGAA...CATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp AAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCTCCCACGCCGTGCCCTaGAGTGAGGTCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: KNFPMARTCGSSEKVSTASHAVP*SEVPPP
Trigger: TGGTGGAGGGACCTCACTCCAGGGCACGGCGTGGGA...GGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp TTCTCAACGCTGCCACCAGAGCTCTTCGACTACCCCTCCCACGCCGTGCCCTGGCGCAGTGACTTGCCCTaGCAACTGGCACCACTCACC +
Preference number: 4 (lower is better)
Translates to: FSTLPPELFDYPSHAVPWRSDLP*QLAPLT
Trigger: GGTGAGTGGTGCCAGTTGCCAGGGCAAGTCACTGCG...CCAGGGCACGGCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR CCA 90 bp CCTTGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCAGGGACCCGGCTGGGATaGCTGGGGTGGCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PWSSAVTGPLGLKNFPMAGTRLG*LGWLGC
Trigger: ACACCCCAGCCACCCCAGCCATCCCAGCCGGGTCCC...TGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp TGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGCCAGGTCCTGCCCTCTaGGCTGTTGCCCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: WSSAVTGPLGLKNFPMARPGPAL*AVAQGG
Trigger: TCCACCCTGGGCAACAGCTCAGAGGGCAGGACCTGG...CCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp GGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAACAGGACCACTGGGTCTaGAGAACTTCCCCATGGCAC +
Preference number: 4 (lower is better)
Translates to: GTDLRQLREGLHCQQHGQQDHWV*RTSPWH
Trigger: GTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTG...TTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp TCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGAACTCGGTCACCTaGCGCTTCAGCAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SWLLPPQVPPPYGAELGHLNSVT*RFSKQG
Trigger: CCCCTGCTTGCTGAAGCGTCAGGTGACCGAGTTCAG...GTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR TCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTGCCACCTTACGGAGCTaGACTCGGTCACCTGACGCT +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGATLRS*TRSPDA
Trigger: AGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGC...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR TCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCGCCACCTTACGGAGCTaGACTCGGTCACCTGACGCT +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVATLRS*TRSPDA
Trigger: AGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGC...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR TCA 90 bp CCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCATTAACAGTATCCTCTaGGGCCTCCCGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: PGCFLLRCRHLTELNSVTINSIL*GLPPTL
Trigger: GAGGGTGGGCGGGAGGCCTCAGAGGATACTGTTAAT...GGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR TCA 90 bp TTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATTAACAGTATCCTCTaGGGCCTCCCGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: FPMARTCGSSEKVSTASSINSIL*GLPPTL
Trigger: GAGGGTGGGCGGGAGGCCTCAGAGGATACTGTTAAT...GCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp GTGCTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTGGTCCTCAGCAGTCAGCCTGAAGCCTGCATaGAGGAGGCCCCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VLRASSSCPRMPPWSSAVSLKPA*RRPLQG
Trigger: GCCCTGGAGGGGCCTCCTGCATGCAGGCTTCAGGCT...GACTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp AACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCGAAGGCTGCCAGCTCTaGCCTGAGCTCAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: NFPMARTCGSSEKVSTASEGCQL*PELSLK
Trigger: CTTCAGGCTGAGCTCAGGGCAGAGCTGGCAGCCTTC...GCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCGAAGGCTGCCAGCTCTaGCCTGAGCTCAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVEGCQL*PELSLK
Trigger: CTTCAGGCTGAGCTCAGGGCAGAGCTGGCAGCCTTC...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp TGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGGGCAGGCAGGCCCTATaGTCTGCCTGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WSSAVTGPLGLKNFPMARGRQAL*SAWKAA
Trigger: GGCAGCCTTCCAGGCAGAGCATAGGGCCTGCCTGCC...CCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp TCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACGGGTGGCCAGGGCAGTaGCCAGCAGCTCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SEELPHGTDLRQLREGLHGWPGQ*PAALPE
Trigger: CTCTGGAAGAGCTGCTGGGCACTGCCCTGGCCACCC...GTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp CCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCGGGCTGCATAGACCATaGAGAAGGCCTTTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PGCFLLRCRHLTELNSVTGLHRP*RRPFRL
Trigger: CAGGCGGAAAGGCCTTCTGCATGGTCTATGCAGCCC...GGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTTGGCAGCCCCAGGGCTaGATAGACCATGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGWQPQG*IDHAEG
Trigger: GCCTTCTGCATGGTCTATGCAGCCCTGGGGCTGCCA...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp GCCCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCTGCCACCAGAGCTCTTTGGCAGCCCCAGGGCTaGATAGACCATGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: ALATGTTHPLLNAATRALWQPQG*IDHAEG
Trigger: GCCTTCTGCATGGTCTATGCAGCCCTGGGGCTGCCA...AAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR GCA 90 bp GTGACTTGCCCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCTGCCACCAGTGGCAGCCCCAGGGCTaGATAGACCATGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: VTCPGNWHHSPPSQRCHQWQPQG*IDHAEG
Trigger: GCCTTCTGCATGGTCTATGCAGCCCTGGGGCTGCCA...CTGGTGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGCAAGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR GCA 90 bp GTGCTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTGGTCCTCAGCAGTCCTGGCCGGTGACAGCTaGCAGTGGACCGCTACCCAG +
Preference number: 4 (lower is better)
Translates to: VLRASSSCPRMPPWSSAVLAGDS*QWTATQ
Trigger: CTGGGTAGCGGTCCACTGGCAGCTGTCACCGGCCAG...GACTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp AGGGTGCTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTGGTCCTCAGCACTGGCCGGTGACAGCTaGCAGTGGACCGCTACCCAG +
Preference number: 4 (lower is better)
Translates to: RVLRASSSCPRMPPWSSALAGDS*QWTATQ
Trigger: CTGGGTAGCGGTCCACTGGCAGCTGTCACCGGCCAG...TGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAGCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp CCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCCATCCTGCCCTAGGATaGCACCTTGGTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGCFLLRCRHLTELNSVTHPALG*HLGPQQ
Trigger: CTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATG...GGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp TCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCCCAGCCACTCCTGGCTaGTTCCTCCTCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: SAVTGPLGLKNFPMARTCPATPG*FLLRCR
Trigger: GCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGCTGG...GCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp AACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCCCCTCCACCAAGAAGTaGGAGCTGGCCCAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: NFPMARTCGSSEKVSTASPSTKK*ELAQVV
Trigger: TACCACCTGGGCCAGCTCGCACTTCTTGGTGGAGGG...GCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp GAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCGGCAATGGCGCAGGGTaGCCACGAGAGCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: EELPHGTDLRQLREGLHCGNGAG*PRELRR
Trigger: CCTCCTTAGCTCTCGTGGCCACCCTGCGCCATTGCC...GCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAAGCAGGTGACAGCTGCCAGTaGACCGCTACCCAGGCACGT +
Preference number: 4 (lower is better)
Translates to: QVPPPYGAELGHLTLQQAGDSCQ*TATQAR
Trigger: ACGTGCCTGGGTAGCGGTCCACTGGCAGCTGTCACC...TGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp TCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACGCAGCACAAAGCTGCTaGCCACCAGCAGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SWLLPPQVPPPYGAELGHAAQSC*PPAVPV
Trigger: CACTGGGACTGCTGGTGGCCAGCAGCTTTGTGCTGC...GTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp TCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCCACAGCACCAGCGCTaGCAGCAGCACAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SWLLPPQVPPPYGAELGHPQHQR*QQHKAA
Trigger: AGCAGCTTTGTGCTGCTGCCAGCGCTGGTGCTGTGG...GTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCTTCCCCAGCCACTCCTaGCTGCTTCCTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVFPSHS*LLPPQV
Trigger: CACCTGAGGAGGAAGCAGCCAGGAGTGGCTGGGGAA...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR CCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTTTCCCCAGCCACTCCTaGCTGCTTCCTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGFPSHS*LLPPQV
Trigger: CACCTGAGGAGGAAGCAGCCAGGAGTGGCTGGGGAA...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR CCA 90 bp TGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGTGCTGGGGCAGCGCCTaGGTTCTGGTGATGCTCCCC +
Preference number: 4 (lower is better)
Translates to: WSSAVTGPLGLKNFPMARCWGSA*VLVMLP
Trigger: GGGGAGCATCACCAGAACCCAGGCGCTGCCCCAGCA...CCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR CCA 90 bp CAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAAGCAGATGGCTGGGGTGGCTaGGGTGTGAACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QVPPPYGAELGHLTLQQADGWGG*GVNRRE
Trigger: CTCCCTCCTGTTCACACCCCAGCCACCCCAGCCATC...TGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAAGCAGGGGCTTGTGGGTGCTGTGGGAACTaGCGGCTCCACCTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PPYGAELGHLTLQQAGACGCCGN*RLHLRH
Trigger: GTGCCTGAGGTGGAGCCGCCAGTTCCCACAGCACCC...ACAAGCCCCTGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CCAGCAGCATGGCCAAGAGTCCTAGAAGCAAGTAACCTGGGGAGGAGAAGGTGCGCCGCTGGGGTGCTGTaGGAACTGGCGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: PAAWPRVLEASNLGRRRCAAGVL*ELAAPP
Trigger: AGGTGGAGCCGCCAGTTCCCACAGCACCCCAGCGGC...GCACCTTCTCCTCCCCAGGTTACTTGCTTCTAGGACTCTTGGCCATGCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR CCA 90 bp CTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTGGTCCTCAGCAGTCACAGCCGCTGGGGTGCTGTaGGAACTGGCGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LRASSSCPRMPPWSSAVTAAGVL*ELAAPP
Trigger: AGGTGGAGCCGCCAGTTCCCACAGCACCCCAGCGGC...TGTGACTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp ACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCACCACTGCCAGCAGCATaGCCAAGAGTCCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TSPWHGPAAAQRRSPLPAPLPAA*PRVPLL
Trigger: GAGAAGGGGGACTCTTGGCCATGCTGCTGGCAGTGG...TGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525254.1
CDS-3UTR TCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGCATAACCTGTGGTGGTaGGGATGCTGGCAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSHNLWW*GCWQRR
Trigger: TCTTCGCTGCCAGCATCCTCACCACCACAGGTTATG...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp TTCTCAACGCTGCCACCAGAGCTCTTCGACTACCCCTCCCACGCCGTGCCCTGGCATAACCTGTGGTGGTaGGGATGCTGGCAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: FSTLPPELFDYPSHAVPWHNLWW*GCWQRR
Trigger: TCTTCGCTGCCAGCATCCTCACCACCACAGGTTATG...CCAGGGCACGGCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR TCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCAGGACCACTGGGTCTaGAGAACTTCCCCATGGCAC +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGQDHWV*RTSPWH
Trigger: GTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTG...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR TCA 90 bp CCACTCACCCCCTTCTCAACGCTGCCACCAGAGCTCTTCGACTACCCCTCCCACCAGGACCACTGGGTCTaGAGAACTTCCCCATGGCAC +
Preference number: 4 (lower is better)
Translates to: PLTPFSTLPPELFDYPSHQDHWV*RTSPWH
Trigger: GTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTG...GTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGTGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR TCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCCAGGACCACTGGGTCTaGAGAACTTCCCCATGGCAC +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVQDHWV*RTSPWH
Trigger: GTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTG...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR TCA 90 bp CAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGACGCTTCAGCAAGCACTGAACTCGGTCACCTaGCGCTTCAGCAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QVPPPYGAELGHLTLQQALNSVT*RFSKQG
Trigger: CCCCTGCTTGCTGAAGCGTCAGGTGACCGAGTTCAG...TGCTTGCTGAAGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp CCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGCCACCTTACGGAGCTaGACTCGGTCACCTGACGCT +
Preference number: 4 (lower is better)
Translates to: PLGLKNFPMARTCGSSEKATLRS*TRSPDA
Trigger: AGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGC...CTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTATTAACAGTATCCTCTaGGGCCTCCCGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGINSIL*GLPPTL
Trigger: GAGGGTGGGCGGGAGGCCTCAGAGGATACTGTTAAT...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp CCTTGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCAAGCCTGAAGCCTGCATaGAGGAGGCCCCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PWSSAVTGPLGLKNFPMASLKPA*RRPLQG
Trigger: GCCCTGGAGGGGCCTCCTGCATGCAGGCTTCAGGCT...TGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp AGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGGAAGGCTGCCAGCTCTaGCCTGAGCTCAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SHRTTGSEELPHGTDLRQEGCQL*PELSLK
Trigger: CTTCAGGCTGAGCTCAGGGCAGAGCTGGCAGCCTTC...CTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp TCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCCACCAGCAGTCCCAGTaGAACTGCCTGCAGCAGCGC +
Preference number: 4 (lower is better)
Translates to: SAVTGPLGLKNFPMARTCHQQSQ*NCLQQR
Trigger: GCGCTGCTGCAGGCAGTTGCACTGGGACTGCTGGTG...GCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGAGAGAAGGTCTCCACTaGCAGCAGCATGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSREGLH*QQHGQE
Trigger: CTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCT...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp TTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCAGAGAAGGTCTCCACTaGCAGCAGCATGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: FPMARTCGSSEKVSTASSREGLH*QQHGQE
Trigger: CTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCT...GCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp CCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCAGAGAAGGTCTCCACTaGCAGCAGCATGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PGCFLLRCRHLTELNSVTREGLH*QQHGQE
Trigger: CTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCT...GGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp ACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAACCCATGGCACGGACCTaGGGCAGCTCAGAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TTGSEELPHGTDLRQLREPMART*GSSEKV
Trigger: GACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGG...TTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp GCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCCATCCTGCCCTAGGATaGCACCTTGGTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: AVTGPLGLKNFPMARTCGHPALG*HLGPQQ
Trigger: CTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATG...GCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCCATCCTGCCCTAGGATaGCACCTTGGTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVHPALG*HLGPQQ
Trigger: CTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATG...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp CCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCAGAGCCAGTTCATCCTaGCCTAGGATGCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: PGCFLLRCRHLTELNSVTRASSS*PRMPPW
Trigger: CCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCT...GGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp CCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGAGAGCCAGTTCATCCTaGCCTAGGATGCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: PMARTCGSSEKVSTASSMRASSS*PRMPPW
Trigger: CCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCT...CATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp GCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAAGAGAGCCAGTTCATCCTaGCCTAGGATGCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: ARTCGSSEKVSTASSMAKRASSS*PRMPPW
Trigger: CCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCT...CTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp CCTTGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACCAGCCACTCCTGGCTaGTTCCTCCTCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: PWSSAVTGPLGLKNFPMAPATPG*FLLRCR
Trigger: GCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGCTGG...TGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp GTGACTTGCCCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCTGCCACCAGCCCCCTTCTCAACGCTaGCACCAGAGCTCTTCGACT +
Preference number: 4 (lower is better)
Translates to: VTCPGNWHHSPPSQRCHQPPSQR*HQSSST
Trigger: AGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGG...CTGGTGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGCAAGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR GCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCCCCCTTCTCAACGCTaGCACCAGAGCTCTTCGACT +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGPPSQR*HQSSST
Trigger: AGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGG...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp CTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTACAGGCAGCAGGCAATaGCGCAGGGTGGCCACGAGA +
Preference number: 4 (lower is better)
Translates to: LKNFPMARTCGSSEKVSTTGSRQ*RRVATR
Trigger: TCTCGTGGCCACCCTGCGCCATTGCCTGCTGCCTGT...AGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp TGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGGGTGACAGCTGCCAGTaGACCGCTACCCAGGCACGT +
Preference number: 4 (lower is better)
Translates to: WSSAVTGPLGLKNFPMARGDSCQ*TATQAR
Trigger: ACGTGCCTGGGTAGCGGTCCACTGGCAGCTGTCACC...CCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp AGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGGCAGCACAAAGCTGCTaGCCACCAGCAGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SSHRTTGSEELPHGTDLRAAQSC*PPAVPV
Trigger: CACTGGGACTGCTGGTGGCCAGCAGCTTTGTGCTGC...CCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp GCCACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGCCTAGGATGCCACCTTaGTCCTCAGCAGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: ATPGCFLLRCRHLTELNSPRMPP*SSAVTG
Trigger: TCCTGTGACTGCTGAGGACCAAGGTGGCATCCTAGG...CGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR CCA 90 bp GAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCTTCCCCAGCCACTCCTaGCTGCTTCCTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: EELPHGTDLRQLREGLHCFPSHS*LLPPQV
Trigger: CACCTGAGGAGGAAGCAGCCAGGAGTGGCTGGGGAA...GCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp ACTGGCACCACTCACCCCCTTCTCAACGCTGCCACCAGAGCTCTTCGACTACCCTTCCCCAGCCACTCCTaGCTGCTTCCTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TGTTHPLLNAATRALRLPFPSHS*LLPPQV
Trigger: CACCTGAGGAGGAAGCAGCCAGGAGTGGCTGGGGAA...GGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR CCA 90 bp CACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCACTTGCCCTGGCAACTaGCACCACTCACCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: HRTTGSEELPHGTDLRQLTCPGN*HHSPPS
Trigger: AGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGCAAGT...GAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR CCA 90 bp CTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGGATGGCTGGGGTGGCTaGGGTGTGAACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LSSHRTTGSEELPHGTDLDGWGG*GVNRRE
Trigger: CTCCCTCCTGTTCACACCCCAGCCACCCCAGCCATC...CAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp TGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGCTGGGATGGCTGGGGTaGCTGGGGTGTGAACAGGAG +
Preference number: 4 (lower is better)
Translates to: WSSAVTGPLGLKNFPMARLGWLG*LGCEQE
Trigger: CTCCTGTTCACACCCCAGCCACCCCAGCCATCCCAG...CCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTGGTCCTCAGCAGTCACAGAGGTGCTGTGTGGGTaGCTGGGACCCGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LRASSSCPRMPPWSSAVTEVLCG*LGPGWD
Trigger: ATCCCAGCCGGGTCCCAGCCACCCACACAGCACCTC...TGTGACTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCCCACTGCCAGCAGCATaGCCAAGAGTCCAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: PGCFLLRCRHLTELNSVTPLPAA*PRVQEV
Trigger: CACTTCTTGGACTCTTGGCCATGCTGCTGGCAGTGG...GGTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530380.1
CDS-3UTR TCA 90 bp TCCCAGCGCAGTGACTTGCCCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCATAACCTGTGGTGGTaGGGATGCTGGCAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: SQRSDLPWQLAPLTPFSTHNLWW*GCWQRR
Trigger: TCTTCGCTGCCAGCATCCTCACCACCACAGGTTATG...CGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGCAAGTCACTGCGCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR TCA 90 bp TGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGCTGAACTCGGTCACCTaGCGCTTCAGCAAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: WSSAVTGPLGLKNFPMARLNSVT*RFSKQG
Trigger: CCCCTGCTTGCTGAAGCGTCAGGTGACCGAGTTCAG...CCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp AAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCATTAACAGTATCCTCTaGGGCCTCCCGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: KNFPMARTCGSSEKVSTAINSIL*GLPPTL
Trigger: GAGGGTGGGCGGGAGGCCTCAGAGGATACTGTTAAT...GGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp AGGGTGCTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTGGTCCTCAGCATGGCAGCCCCAGGGCTaGATAGACCATGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RVLRASSSCPRMPPWSSAWQPQG*IDHAEG
Trigger: GCCTTCTGCATGGTCTATGCAGCCCTGGGGCTGCCA...TGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAGCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCAGAGAAGGTCTCCACTaGCAGCAGCATGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVREGLH*QQHGQE
Trigger: CTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCT...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp GAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCATCCTGCCCTAGGATaGCACCTTGGTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: EELPHGTDLRQLREGLHCHPALG*HLGPQQ
Trigger: CTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATG...GCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp CTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCCATCCTGCCCTAGGATaGCACCTTGGTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LGLKNFPMARTCGSSEKVHPALG*HLGPQQ
Trigger: CTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATG...GACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTAGAGCCAGTTCATCCTaGCCTAGGATGCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGRASSS*PRMPPW
Trigger: CCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCT...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp ACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAAGAGCCAGTTCATCCTaGCCTAGGATGCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: TSPWHGPAAAQRRSPLPARASSS*PRMPPW
Trigger: CCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCT...TGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp TCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACAGAGCCAGTTCATCCTaGCCTAGGATGCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: SWLLPPQVPPPYGAELGHRASSS*PRMPPW
Trigger: CCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCT...GTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR GCA 90 bp AGGGTGCTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTGGTCCTCAGCACCCTCCACCAAGAAGTaGGAGCTGGCCCAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: RVLRASSSCPRMPPWSSAPSTKK*ELAQVV
Trigger: TACCACCTGGGCCAGCTCGCACTTCTTGGTGGAGGG...TGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAGCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp CTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCCCCCCTTCTCAACGCTaGCACCAGAGCTCTTCGACT +
Preference number: 4 (lower is better)
Translates to: LGLKNFPMARTCGSSEKVPPSQR*HQSSST
Trigger: AGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGG...GACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp CTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGGCAGCACAAAGCTGCTaGCCACCAGCAGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LSSHRTTGSEELPHGTDLAAQSC*PPAVPV
Trigger: CACTGGGACTGCTGGTGGCCAGCAGCTTTGTGCTGC...CAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp TGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGCCACAGCACCAGCGCTaGCAGCAGCACAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: WSSAVTGPLGLKNFPMARPQHQR*QQHKAA
Trigger: AGCAGCTTTGTGCTGCTGCCAGCGCTGGTGCTGTGG...CCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCCACTGCCAGCAGCATaGCCAAGAGTCCTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGPLPAA*PRVLEA
Trigger: TGCTTCTAGGACTCTTGGCCATGCTGCTGGCAGTGG...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp ACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCACCACTGCCAGCAGCATaGCCAAGAGTCCTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: TSPWHGPAAAQRRSPLPAPLPAA*PRVLEA
Trigger: TGCTTCTAGGACTCTTGGCCATGCTGCTGGCAGTGG...TGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp GCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCCCTAGGATGCCACCTTaGTCCTCAGCAGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: AVTGPLGLKNFPMARTCGPRMPP*SSAVTG
Trigger: TCCTGTGACTGCTGAGGACCAAGGTGGCATCCTAGG...GCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp ACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATGGCCAAGAGCCTAGGATGCCACCTTaGTCCTCAGCAGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: TDLRQLREGLHCQQHGQEPRMPP*SSAVTG
Trigger: TCCTGTGACTGCTGAGGACCAAGGTGGCATCCTAGG...CTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp TCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCCTAGGATGCCACCTTaGTCCTCAGCAGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: SWLLPPQVPPPYGAELGHPRMPP*SSAVTG
Trigger: TCCTGTGACTGCTGAGGACCAAGGTGGCATCCTAGG...GTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
ENST00000530380.1
CDS-3UTR CCA 90 bp AGGGTGCTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTGGTCCTCAGCATTCCCCAGCCACTCCTaGCTGCTTCCTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RVLRASSSCPRMPPWSSAFPSHS*LLPPQV
Trigger: CACCTGAGGAGGAAGCAGCCAGGAGTGGCTGGGGAA...TGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAGCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp TGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGCGCAGTGACTTGCCCTaGCAACTGGCACCACTCACC +
Preference number: 4 (lower is better)
Translates to: WSSAVTGPLGLKNFPMARRSDLP*QLAPLT
Trigger: GGTGAGTGGTGCCAGTTGCCAGGGCAAGTCACTGCG...CCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR TCA 90 bp TGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGCAGGACCACTGGGTCTaGAGAACTTCCCCATGGCAC +
Preference number: 4 (lower is better)
Translates to: WSSAVTGPLGLKNFPMARQDHWV*RTSPWH
Trigger: GTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTG...CCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp CTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTGGTCCTCAGCAGTCACAGCCACCTTACGGAGCTaGACTCGGTCACCTGACGCT +
Preference number: 4 (lower is better)
Translates to: LRASSSCPRMPPWSSAVTATLRS*TRSPDA
Trigger: AGCGTCAGGTGACCGAGTTCAGCTCCGTAAGGTGGC...TGTGACTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp TGGTCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGATTAACAGTATCCTCTaGGGCCTCCCGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: WSSAVTGPLGLKNFPMARINSIL*GLPPTL
Trigger: GAGGGTGGGCGGGAGGCCTCAGAGGATACTGTTAAT...CCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR TCA 90 bp AGGGTGCTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTGGTCCTCAGCAATTAACAGTATCCTCTaGGGCCTCCCGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: RVLRASSSCPRMPPWSSAINSIL*GLPPTL
Trigger: GAGGGTGGGCGGGAGGCCTCAGAGGATACTGTTAAT...TGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAGCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp CTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGGGCTGCATAGACCATaGAGAAGGCCTTTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LKNFPMARTCGSSEKVSTGLHRP*RRPFRL
Trigger: CAGGCGGAAAGGCCTTCTGCATGGTCTATGCAGCCC...AGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp TCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACGGGCTGCATAGACCATaGAGAAGGCCTTTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SEELPHGTDLRQLREGLHGLHRP*RRPFRL
Trigger: CAGGCGGAAAGGCCTTCTGCATGGTCTATGCAGCCC...GTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp ACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCCAAGTAACCAAGAAGTaGGAGCTGGCCCAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: TPGCFLLRCRHLTELNSVQVTKK*ELAQVV
Trigger: TACCACCTGGGCCAGCTCGCACTTCTTGGTTACTTG...GACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340313.5
CDS-3UTR GCA 90 bp GTGCTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTGGTCCTCAGCAGTCCATCCTGCCCTAGGATaGCACCTTGGTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VLRASSSCPRMPPWSSAVHPALG*HLGPQQ
Trigger: CTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATG...GACTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp GGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCCCACTGCCAGCAGCATaGCCAAGAGTCCTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GLKNFPMARTCGSSEKVSPLPAA*PRVLEA
Trigger: TGCTTCTAGGACTCTTGGCCATGCTGCTGGCAGTGG...GGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCCCTAGGATGCCACCTTaGTCCTCAGCAGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: LGLKNFPMARTCGSSEKVPRMPP*SSAVTG
Trigger: TCCTGTGACTGCTGAGGACCAAGGTGGCATCCTAGG...GACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR CCA 90 bp GAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCACCCTTCCCAGGTCCTaGAGGCAAGACATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: EELPHGTDLRQLREGLHCTLPRS*RQDICP
Trigger: TGGGCAAATGTCTTGCCTCCAGGACCTGGGAAGGGT...GCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp CTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTAGAGAAGGTCTCCACTaGCAGCAGCATGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LKNFPMARTCGSSEKVSTREGLH*QQHGQE
Trigger: CTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCT...AGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
ENST00000525254.1
CDS-3UTR GCA 90 bp TCCTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCGGACTTACCAAGAAGTaGGAGCTGGCCCAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: SSAVTGPLGLKNFPMARTGLTKK*ELAQVV
Trigger: TACCACCTGGGCCAGCTCGCACTTCTTGGTAAGTCC...GGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR CCA 90 bp CTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTCCACTGCCAGCAGCATaGCCAAGAGTCCTAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LKNFPMARTCGSSEKVSTPLPAA*PRVLEA
Trigger: TGCTTCTAGGACTCTTGGCCATGCTGCTGGCAGTGG...AGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp ACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAACCCTTCCCAGGTCCTaGAGGCAAGACATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: TTGSEELPHGTDLRQLRETLPRS*RQDICP
Trigger: TGGGCAAATGTCTTGCCTCCAGGACCTGGGAAGGGT...TTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR GCA 90 bp CCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGTGGAGGCAAGACATTTaGCCATTTCACAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PLGLKNFPMARTCGSSEKWRQDI*PFHSSW
Trigger: CCAGCTGCTGTGAAATGGGCAAATGTCTTGCCTCCA...CTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp ACTGGCACCACTCACCCCCTTCTCAACGCTGCCACCAGAGCTCTTCGACTACCCACGCTGTTAGGTGGCTaGACTTACCAAGAAGTGCGA +
Preference number: 4 (lower is better)
Translates to: TGTTHPLLNAATRALRLPTLLGG*TYQEVR
Trigger: TCGCACTTCTTGGTAAGTCCAGCCACCTAACAGCGT...GGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR GCA 90 bp CTCAGCAGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGTGGAGGCAAGACATTTaGCCATTTCACAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSSHRTTGSEELPHGTDLWRQDI*PFHSSW
Trigger: CCAGCTGCTGTGAAATGGGCAAATGTCTTGCCTCCA...CAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACTGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CCA 90 bp CTCAGAGCCAGTTCATCCTGCCCTAGGATGCCACCTTGGTCCTCAGCAGTCACACCACACGCTGTTAGGTaGCTGGACTTACCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LRASSSCPRMPPWSSAVTPHAVR*LDLPRS
Trigger: ACTTCTTGGTAAGTCCAGCCACCTAACAGCGTGTGG...TGTGACTGCTGAGGACCAAGGTGGCATCCTAGGGCAGGATGAACTGGCTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394216.6
CDS-3UTR TCA 90 bp CTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGTCGTTGCTCATTTTATaGTTAACAGTATCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LPHGTDLRQLREGLHCQQSLLIL*LTVSSE
Trigger: CTCAGAGGATACTGTTAATCATAAAATGAGCAACGA...CTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp CACTCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTTCGTTGCTCATTTTATaGTTAACAGTATCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: HSWLLPPQVPPPYGAELGSLLIL*LTVSSE
Trigger: CTCAGAGGATACTGTTAATCATAAAATGAGCAACGA...ACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS-3UTR TCA 90 bp CGCAGTGACTTGCCCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCTGCCATCGTTGCTCATTTTATaGTTAACAGTATCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RSDLPWQLAPLTPFSTLPSLLIL*LTVSSE
Trigger: CTCAGAGGATACTGTTAATCATAAAATGAGCAACGA...TGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGCAAGTCACTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR TCA 90 bp CCAGCAGCATGGCCAAGAGTCCTAGAAGCAAGTAACCTGGGGAGGAGAAGGTGCTCGTTGCTCATTTTATaGTTAACAGTATCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PAAWPRVLEASNLGRRRCSLLIL*LTVSSE
Trigger: CTCAGAGGATACTGTTAATCATAAAATGAGCAACGA...GCACCTTCTCCTCCCCAGGTTACTTGCTTCTAGGACTCTTGGCCATGCTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS CCA 90 bp TGGCCACCAGCAGTCCCAGTGCAACTGCCTGCAGCAGCGCAGCCCTaGCCGGTGACAGCTGCCAGTGGACCGCTACCCAGGCACGTGGGC +
Preference number: 5 (lower is better)
Translates to: WPPAVPVQLPAAAQP*PVTAASGPLPRHVG
Trigger: GCCCACGTGCCTGGGTAGCGGTCCACTGGCAGCTGTCACCGGCCAGGGCTGCGCTGCTGCAGGCAGTTGCACTGGGACTGCTGGTGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS TCA 90 bp CCGGTGACAGCTGCCAGTGGACCGCTACCCAGGCACGTGGGCGGCTaGGCACAGGCAGCAGGCAATGGCGCAGGGTGGCCACGAGAGCTA +
Preference number: 5 (lower is better)
Translates to: PVTAASGPLPRHVGG*AQAAGNGAGWPREL
Trigger: TAGCTCTCGTGGCCACCCTGCGCCATTGCCTGCTGCCTGTGCTCAGCCGCCCACGTGCCTGGGTAGCGGTCCACTGGCAGCTGTCACCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS CCA 90 bp GTGCTGTGTGGGTGGCTGGGACCCGGCTGGGATGGCTGGGGTGGCTaGGGTGTGAACAGGAGGGAGGTGAGCTGCATCACCCTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: VLCGWLGPGWDGWGG*GVNRREVSCITLPR
Trigger: CCTGGGAAGGGTGATGCAGCTCACCTCCCTCCTGTTCACACCCCAGCCACCCCAGCCATCCCAGCCGGGTCCCAGCCACCCACACAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS GCA 90 bp TCTCAACGCTGCCACCAGAGCTCTTCGACTACCCCTCCCACGCCGTaGCCTGGAGTGAGGTCCCTCCACCAAGAAGTGCGAGCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: SQRCHQSSSTTPPTP*PGVRSLHQEVRAGP
Trigger: TGGGCCAGCTCGCACTTCTTGGTGGAGGGACCTCACTCCAGGGCACGGCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394217.6
ENST00000525254.1
CDS GCA 90 bp CCACGAGAGCTAAGGAGGCTGGCAGCCCCAGGGCTGCATAGACCATaGAGAAGGCCTTTCCGCCTGGCGATAGTGGGGCCATGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: PRELRRLAAPGLHRP*RRPFRLAIVGPCGH
Trigger: ATGGCCACATGGCCCCACTATCGCCAGGCGGAAAGGCCTTCTGCATGGTCTATGCAGCCCTGGGGCTGCCAGCCTCCTTAGCTCTCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS GCA 90 bp CTTCCCCATGGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTaGCAGCAGCATGGCCAAGAGTCCAAGAAGTGCGAGCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LPHGTDLRQLREGLH*QQHGQESKKCELAQ
Trigger: CTGGGCCAGCTCGCACTTCTTGGACTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCCATGGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530380.1
CDS-3UTR CAA 90 bp GTGACTTGCCCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCTGCCACCAGTCCCAGCGCAGTGACTaGCCCTGGCAACTGGCACCA +
Preference number: 5 (lower is better)
Translates to: VTCPGNWHHSPPSQRCHQSQRSD*PWQLAP
Trigger: TGGTGCCAGTTGCCAGGGCAAGTCACTGCGCTGGGA...CTGGTGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGCAAGTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS-3UTR CAA 90 bp CGCAGTGACTTGCCCTGGCAACTGGCACCACTCACCCCCTTCTCAACGCTGCCATCCCAGCGCAGTGACTaGCCCTGGCAACTGGCACCA +
Preference number: 5 (lower is better)
Translates to: RSDLPWQLAPLTPFSTLPSQRSD*PWQLAP
Trigger: TGGTGCCAGTTGCCAGGGCAAGTCACTGCGCTGGGA...TGGCAGCGTTGAGAAGGGGGTGAGTGGTGCCAGTTGCCAGGGCAAGTCACTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342202.8
ENST00000394216.6
CDS CCA 90 bp CACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATaGCCAAGAGTCCTAGAAGCAAGTAACCAAGAAGTGCGAGCTGGC +
Preference number: 5 (lower is better)
Translates to: HGPAAAQRRSPLPAA*PRVLEASNQEVRAG
Trigger: GCCAGCTCGCACTTCTTGGTTACTTGCTTCTAGGACTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340313.5
CDS-3UTR CAA 90 bp TCCTGGCTGCTTCCTCCTCAGGTGCCGCCACCTTACGGAGCTGAACTCGGTCACCTGGAGGCAAGACATTaGCCCATTTCACAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SWLLPPQVPPPYGAELGHLEARH*PISQQL
Trigger: CAGCTGCTGTGAAATGGGCAAATGTCTTGCCTCCAG...GTGACCGAGTTCAGCTCCGTAAGGTGGCGGCACCTGAGGAGGAAGCAGCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS-3UTR CAA 90 bp AGTCACAGGACCACTGGGTCTGAAGAACTTCCCCATGGCACGGACCTGCGGCAGCTGGAGGCAAGACATTaGCCCATTTCACAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SHRTTGSEELPHGTDLRQLEARH*PISQQL
Trigger: CAGCTGCTGTGAAATGGGCAAATGTCTTGCCTCCAG...CTGCCGCAGGTCCGTGCCATGGGGAAGTTCTTCAGACCCAGTGGTCCTGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394216.6
ENST00000394217.6
CDS GCA 72 bp CGAGCTGGCCCAGGTGGTAAATCACGGGGTGCAGGCTaGGGCCGCGGCCGGGCAGCAAGTCCTCCAGGCCAA +
Preference number: 6 (lower is better)
Translates to: RAGPGGKSRGAG*GRGRAASPPGQ
Trigger: TTGGCCTGGAGGACTTGCTGCCCGGCCGCGGCCGCAGCCTGCACCCCGTGATTTACCACCTGGGCCAGCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS CCA 72 bp GCTGCAGTCGCCCTGAAGGCCCCACAGCACCAGCGCTaGCAGCAGCACAAAGCTGCTGGCCACCAGCAGTCC +
Preference number: 6 (lower is better)
Translates to: AAVALKAPQHQR*QQHKAAGHQQS
Trigger: GGACTGCTGGTGGCCAGCAGCTTTGTGCTGCTGCCAGCGCTGGTGCTGTGGGGCCTTCAGGGCGACTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS GCA 72 bp GCAGGCCCTATGCTCTGCCTGGAAGGCTGCCAGCTCTaGCCTGAGCTCAGCCTGAAGCCTGCATGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: AGPMLCLEGCQL*PELSLKPACRR
Trigger: CCTCCTGCATGCAGGCTTCAGGCTGAGCTCAGGGCAGAGCTGGCAGCCTTCCAGGCAGAGCATAGGGCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS GCA 72 bp GCCAGCAGCATGGCCAAGAGTCCCCCTTCTCAACGCTaGCACCAGAGCTCTTCGACTACCCCTCCCACGCCG +
Preference number: 6 (lower is better)
Translates to: ASSMAKSPPSQR*HQSSSTTPPTP
Trigger: CGGCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCAGCGTTGAGAAGGGGGACTCTTGGCCATGCTGCTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525254.1
CDS CCA 72 bp CCAGAGCTCTTCGACTACCCCTCCCACGCCGTGCCCTaGAGTGAGGTCCCTCCACCAAGAAGTGCGAGCTGG +
Preference number: 6 (lower is better)
Translates to: PELFDYPSHAVP*SEVPPPRSASW
Trigger: CCAGCTCGCACTTCTTGGTGGAGGGACCTCACTCCAGGGCACGGCGTGGGAGGGGTAGTCGAAGAGCTCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394217.6
ENST00000525254.1
CDS GCA 72 bp CTAAGGAGGCTGGCAGCCCCAGGGCTGCATAGACCATaGAGAAGGCCTTTCCGCCTGGCGATAGTGGGGCCA +
Preference number: 6 (lower is better)
Translates to: LRRLAAPGLHRP*RRPFRLAIVGP
Trigger: TGGCCCCACTATCGCCAGGCGGAAAGGCCTTCTGCATGGTCTATGCAGCCCTGGGGCTGCCAGCCTCCTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340313.5
ENST00000342202.8
ENST00000394216.6
ENST00000394217.6
CDS GCA 72 bp TGCCACCAGAGCTCTTCGACTACCCCTCCCACGCCGTaGCCTGGAGTGAGGTCCCTCCACCAAGAAGTGCGA +
Preference number: 6 (lower is better)
Translates to: CHQSSSTTPPTP*PGVRSLHQEVR
Trigger: TCGCACTTCTTGGTGGAGGGACCTCACTCCAGGGCACGGCGTGGGAGGGGTAGTCGAAGAGCTCTGGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342202.8
ENST00000394217.6
ENST00000525254.1
CDS GCA 72 bp GGCACGGACCTGCGGCAGCTCAGAGAAGGTCTCCACTaGCAGCAGCATGGCCAAGAGTCCAAGAAGTGCGAG +
Preference number: 6 (lower is better)
Translates to: GTDLRQLREGLH*QQHGQESKKCE
Trigger: CTCGCACTTCTTGGACTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGCAGGTCCGTGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530380.1
CDS CCA 72 bp GCGGCAGCTCAGAGAAGGTCTCCACTGCCAGCAGCATaGCCAAGAGTCCTAGAAGCAAGTAACCAAGAAGTG +
Preference number: 6 (lower is better)
Translates to: AAAQRRSPLPAA*PRVLEASNQEV
Trigger: CACTTCTTGGTTACTTGCTTCTAGGACTCTTGGCCATGCTGCTGGCAGTGGAGACCTTCTCTGAGCTGCCGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340313.5