RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for KCNJ5 (Homo sapiens)

Ensembl gene IDs: ENSG00000120457

Ensembl transcript IDs: ENST00000338350.4, ENST00000529694.6, ENST00000533599.1

Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATaGCCGGGCTCGGGCCAGGCAGGGAGCTTTGGCAGAGGACCCTCT +
Preference number: 1 (lower is better)
Translates to: KAEEAHWGGVALIPA*PGSGQAGSFGRGPS
Trigger: AGAGGGTCCTCTGCCAAAGCTCCCTGCCTGGCCCGAGCCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 90 bp CCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTaGGAGTGGGGAGCCCACAGAGGCAGTTCCCGTCCCAGGCTGCCC +
Preference number: 1 (lower is better)
Translates to: PLKIQPRSKAYGAPP*EWGAHRGSSRPRLP
Trigger: GGGCAGCCTGGGACGGGAACTGCCTCTGTGGGCTCCCCACTCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 90 bp TTCCCTGAGCCGGGTGCCAGCCCATTCCCCATTCCCTCCAAGGCTTaGGACCACAACTGCACACCCTGCCACTGGTGGGAAGACCCTGCC +
Preference number: 1 (lower is better)
Translates to: FPEPGASPFPIPSKA*DHNCTPCHWWEDPA
Trigger: GGCAGGGTCTTCCCACCAGTGGCAGGGTGTGCAGTTGTGGTCCCAAGCCTTGGAGGGAATGGGGAATGGGCTGGCACCCGGCTCAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 90 bp CCCAAGAGCCAGGGCTCTCCTTATCTCTGTTGCCTGGGCCCAGCGTaGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCT +
Preference number: 1 (lower is better)
Translates to: PKSQGSPYLCCLGPA*CRGCESLGRTTAPA
Trigger: AGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGCTGGGCCCAGGCAACAGAGATAAGGAGAGCCCTGGCTCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR GCA 90 bp TCGGCGCGACCCCATCCCAAGAGCCAGGGCTCTCCTTATCTCTGTTaGCTGGGCCCAGCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGG +
Preference number: 1 (lower is better)
Translates to: SARPHPKSQGSPYLC*LGPAWCRGCESLGR
Trigger: CCTGCCTAAACTCTCACATCCACGGCACCACGCTGGGCCCAGGCAACAGAGATAAGGAGAGCCCTGGCTCTTGGGATGGGGTCGCGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR GCA 90 bp AAGAGCCAGGGCTCTCCTTATCTCTGTTGCCTGGGCCCAGCGTGGTaGCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTT +
Preference number: 1 (lower is better)
Translates to: KSQGSPYLCCLGPAW*RGCESLGRTTAPAV
Trigger: AACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGCTGGGCCCAGGCAACAGAGATAAGGAGAGCCCTGGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 90 bp CCCATTCCCTCCAAGGCTTGGGACCACAACTGCACACCCTGCCACTaGTGGGAAGACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCA +
Preference number: 1 (lower is better)
Translates to: PIPSKAWDHNCTPCH*WEDPAHLSRSSPGA
Trigger: TGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGTCTTCCCACCAGTGGCAGGGTGTGCAGTTGTGGTCCCAAGCCTTGGAGGGAATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 90 bp TTGGCTGAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTaGAGTGAGAGAACTGGAGAGTGGCTCCCTTGGTCAGGTGGGGGA +
Preference number: 1 (lower is better)
Translates to: LAERCDLVLAHGGPW*SERTGEWLPWSGGG
Trigger: TCCCCCACCTGACCAAGGGAGCCACTCTCCAGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTCAGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR TCA 90 bp CTCTCCTTATCTCTGTTGCCTGGGCCCAGCGTGGTGCCGTGGATGTaGGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGG +
Preference number: 1 (lower is better)
Translates to: LSLSLLPGPSVVPWM*EFRQDHGPGCLFGR
Trigger: CCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGCTGGGCCCAGGCAACAGAGATAAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR GCA 90 bp GGCTTGGGACCACAACTGCACACCCTGCCACTGGTGGGAAGACCCTaGCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCC +
Preference number: 1 (lower is better)
Translates to: GLGPQLHTLPLVGRP*PPLKIQPRSKAYGA
Trigger: GGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGTCTTCCCACCAGTGGCAGGGTGTGCAGTTGTGGTCCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 90 bp CAGGAGGCGATGGGCAGTGGGTTCTCTGACTACACAGGAGGCCGGTaGGAGGGGAGTCTGAAGGGGAGAGTCAAAGGCAATGCCCATTCT +
Preference number: 1 (lower is better)
Translates to: QEAMGSGFSDYTGGR*EGSLKGRVKGNAHS
Trigger: AGAATGGGCATTGCCTTTGACTCTCCCCTTCAGACTCCCCTCCCACCGGCCTCCTGTGTAGTCAGAGAACCCACTGCCCATCGCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR GCA 90 bp CACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAAGGCCATaGCTCTTATTACTACCCGTGGCCTTGAGCAAGCTCATGAACCTC +
Preference number: 1 (lower is better)
Translates to: HGPGCLFGRHLAPRP*LLLLPVALSKLMNL
Trigger: GAGGTTCATGAGCTTGCTCAAGGCCACGGGTAGTAATAAGAGGCATGGCCTTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR TCA 90 bp GGGAGCTTGGCTCAGGCTGAACTTGATGGTGAAGGTGCTGAGCCCTaGGGTCAGAGTGTCTTGGCCACAACTGGGGCAGATGCTGATGTT +
Preference number: 1 (lower is better)
Translates to: GSLAQAELDGEGAEP*GQSVLATTGADADV
Trigger: AACATCAGCATCTGCCCCAGTTGTGGCCAAGACACTCTGACCTCAGGGCTCAGCACCTTCACCATCAAGTTCAGCCTGAGCCAAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 90 bp CACGGAGGGCCCTGGTGGAGTGAGAGAACTGGAGAGTGGCTCCCTTaGTCAGGTGGGGGATGTTTCAGAGTCATAAATGAAGGCAGGTGT +
Preference number: 1 (lower is better)
Translates to: HGGPWWSERTGEWLP*SGGGCFRVINEGRC
Trigger: ACACCTGCCTTCATTTATGACTCTGAAACATCCCCCACCTGACCAAGGGAGCCACTCTCCAGTTCTCTCACTCCACCAGGGCCCTCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 90 bp GTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTGGAGAGTaGCTCCCTTGGTCAGGTGGGGGATGTTTCAGAGTCATAAATGAA +
Preference number: 1 (lower is better)
Translates to: VLAHGGPWWSERTGE*LPWSGGGCFRVINE
Trigger: TTCATTTATGACTCTGAAACATCCCCCACCTGACCAAGGGAGCCACTCTCCAGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR TCA 90 bp ATGGCATGGGCTCAGAGCCATCACAGAACCAAGGGCAGTGGCCTCTaGGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCG +
Preference number: 1 (lower is better)
Translates to: MAWAQSHHRTKGSGL*VVCMQEQCFENGWA
Trigger: CGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTCTGTGATGGCTCTGAGCCCATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 90 bp CATGGGCTCAGAGCCATCACAGAACCAAGGGCAGTGGCCTCTGAGTaGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTGGT +
Preference number: 1 (lower is better)
Translates to: HGLRAITEPRAVASE*FVCRSSVLKMAGRG
Trigger: ACCACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTCTGTGATGGCTCTGAGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 90 bp CGTGAGCCATCTTGCCTGGCCCAGATGCTGATTTTTAAATGCTCCTaGCTCTCCTTTCTCTTTGCCCCATTCCTGTTTCAGGGCCAACTG +
Preference number: 1 (lower is better)
Translates to: REPSCLAQMLIFKCS*LSFLFAPFLFQGQL
Trigger: CAGTTGGCCCTGAAACAGGAATGGGGCAAAGAGAAAGGAGAGCCAGGAGCATTTAAAAATCAGCATCTGGGCCAGGCAAGATGGCTCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR TCA 90 bp GGCTTCCATTCTCAAAGGCCAGTTGAGAGCTGTGAATACTGTGGGTaGGGCCTCCATAATTCTGTGGCCTGGGAACATTGGCACTCTATC +
Preference number: 1 (lower is better)
Translates to: GFHSQRPVESCEYCG*GLHNSVAWEHWHSI
Trigger: GATAGAGTGCCAATGTTCCCAGGCCACAGAATTATGGAGGCCTCACCCACAGTATTCACAGCTCTCAACTGGCCTTTGAGAATGGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 90 bp CTACACTGGACACACAGAACACAGCAGAGGAAAAACACACACATTTaGCAGATAACAGCAGAGAACACCAAGGGCTGTACGCTCTGTACC +
Preference number: 1 (lower is better)
Translates to: LHWTHRTQQRKNTHI*QITAENTKGCTLCT
Trigger: GGTACAGAGCGTACAGCCCTTGGTGTTCTCTGCTGTTATCTGCCAAATGTGTGTGTTTTTCCTCTGCTGTGTTCTGTGTGTCCAGTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 90 bp AACCAGCTCTCCAAACTTTCAGGGTCCGAAAGTGAAATATCACTTTaGGATTTTGGAGATACTCAAGACTGTGGGAATGACCAGCGCATG +
Preference number: 1 (lower is better)
Translates to: NQLSKLSGSESEISL*DFGDTQDCGNDQRM
Trigger: CATGCGCTGGTCATTCCCACAGTCTTGAGTATCTCCAAAATCCCAAAGTGATATTTCACTTTCGGACCCTGAAAGTTTGGAGAGCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGGTCCCAGGCGAGTGCTaGCCTCAGCCGGAGGGCTCC +
Preference number: 2 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGVPGEC*PQPEGS
Trigger: GGAGCCCTCCGGCTGAGGCCAGCACTCGCCTGGGAC...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTGGGCAGTGGGTTCTCTaGCTACACAGGAGGCCGGTG +
Preference number: 2 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCGQWVL*LHRRPV
Trigger: CACCGGCCTCCTGTGTAGTCAGAGAACCCACTGCCC...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTCAGGCAGGATGCCACTaGCTCAGGGAGGCCCTGTGC +
Preference number: 2 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTQAGCH*LREALC
Trigger: GCACAGGGCCTCCCTGAGCCAGTGGCATCCTGCCTG...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR GCA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATGGGGCCCAGGCAGGATaGCACTGGCTCAGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDGAQAG*HWLREA
Trigger: GGCCTCCCTGAGCCAGTGGCATCCTGCCTGGGCCCC...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTGATGGGCTGCCTTTCTaGGACTCCTGGGGGCATGCA +
Preference number: 2 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTDGLPF*DSWGHA
Trigger: TGCATGCCCCCAGGAGTCTCAGAAAGGCAGCCCATC...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR GCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCCTGCTGACCCCGCTTaGCCTCTTGTTTCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSPADPA*PLVSSL
Trigger: CAGGCTGGAAACAAGAGGGCAAGCGGGGTCAGCAGG...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR GCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTGCTTGGGACCACAACTaGACACCCTGCCACTGGTGG +
Preference number: 2 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTAWDHN*TPCHWW
Trigger: CCACCAGTGGCAGGGTGTGCAGTTGTGGTCCCAAGC...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGGCCTGGCCCAGATGCTaGTTTTTAAATGCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGAWPRC*FLNAPG
Trigger: GCCAGGAGCATTTAAAAATCAGCATCTGGGCCAGGC...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTCAAGACTGTGGGAATaGCCAGCGCATGACCCCATC +
Preference number: 2 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCSRLWE*PAHDPI
Trigger: GATGGGGTCATGCGCTGGTCATTCCCACAGTCTTGA...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp CCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGAGGGAGCTGTGAGGGCTaGGTTTATGGTTCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: PTSQDPAQEQSLWSPSLGGSCEG*VYGSSP
Trigger: TGGGGAGGAACCATAAACCCAGCCCTCACAGCTCCC...TCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATGCTGGGGTTCCCCCTTaGTGGGAGGTGCAGGGCACA +
Preference number: 2 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDAGVPP*WEVQGT
Trigger: TGTGCCCTGCACCTCCCACCAAGGGGGAACCCCAGC...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTATTCCCTCCAAGGCTTaGGACCACAACTGCACACCC +
Preference number: 2 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCIPSKA*DHNCTP
Trigger: GGGTGTGCAGTTGTGGTCCCAAGCCTTGGAGGGAAT...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 90 bp GAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTaGGCACCAAGGCCATGCCTCTTATTACTACCCGTGGCCTTGAGC +
Preference number: 2 (lower is better)
Translates to: EFRQDHGPGCLFGRH*APRPCLLLLPVALS
Trigger: GCTCAAGGCCACGGGTAGTAATAAGAGGCATGGCCTTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCGGTAAGTCTCCTCTCTaGGTCCACAGCAAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSGKSPL*VHSKPQ
Trigger: CTGAGGCTTGCTGTGGACTCAGAGAGGAGACTTACC...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTGTTTCAGGGCCAACTaGCTCATCATGTCCCCTGAC +
Preference number: 2 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCCFRAN*LIMSPD
Trigger: GTCAGGGGACATGATGAGCCAGTTGGCCCTGAAACA...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 90 bp CGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTaGGGAGGCACTTGGCACCAAGGCCATGCCTCTTATTACTACCCG +
Preference number: 2 (lower is better)
Translates to: RGCESLGRTTAPAVC*GGTWHQGHASYYYP
Trigger: CGGGTAGTAATAAGAGGCATGGCCTTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAAGAGGTCAGAGTGTCTTaGCCACAACTGGGGCAGATG +
Preference number: 2 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQEVRVS*PQLGQM
Trigger: CATCTGCCCCAGTTGTGGCCAAGACACTCTGACCTC...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTACACCCTGCCACTGGTaGGAAGACCCTGCCCACCTC +
Preference number: 2 (lower is better)
Translates to: ILNHGSALWGPSDVMAWATPCHW*EDPAHL
Trigger: GAGGTGGGCAGGGTCTTCCCACCAGTGGCAGGGTGT...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTCCTAGAAAACACTTCTaGGATGAACCGGGCCTAAGC +
Preference number: 2 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTPRKHF*DEPGLS
Trigger: GCTTAGGCCCGGTTCATCTCAGAAGTGTTTTCTAGG...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR GCA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTAGGCCGCTGTCCAGGTaGAAGGCCAGCTTTGCCTTC +
Preference number: 2 (lower is better)
Translates to: ILNHGSALWGPSDVMAWARPLSR*KASFAF
Trigger: GAAGGCAAAGCTGGCCTTGCACCTGGACAGCGGCCT...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR GCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGACACTGGGGCGGTGTTaGACTAATCCCAGCATGCCC +
Preference number: 2 (lower is better)
Translates to: SSKVTAQARTSTSKQQQETLGRC*TNPSMP
Trigger: GGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGT...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAGGGGTTCCCCCTTGGTaGGAGGTGCAGGGCACAGTG +
Preference number: 2 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKGVPPW*EVQGTV
Trigger: CACTGTGCCCTGCACCTCCCACCAAGGGGGAACCCC...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAACTCCACCCTTGCTCTTaGGCCTCCAGATCAGAAAAG +
Preference number: 2 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQLHPCS*ASRSEK
Trigger: CTTTTCTGATCTGGAGGCCCAAGAGCAAGGGTGGAG...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATGAGAGAACTGGAGAGTaGCTCCCTTGGTCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDERTGE*LPWSGG
Trigger: CCCACCTGACCAAGGGAGCCACTCTCCAGTTCTCTC...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTCCAGGCAGGGAGCTTTaGCAGAGGACCCTCTGCACG +
Preference number: 2 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRPGREL*QRTLCT
Trigger: CGTGCAGAGGGTCCTCTGCCAAAGCTCCCTGCCTGG...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCAGAGGAGGCACACTaGGGCGGTGTTGCACTAATC +
Preference number: 2 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEAEEAH*GGVALI
Trigger: GATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGC...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTACCGGGCCTAAGCTCTaGAGCCTTCCCTTTGCTCTG +
Preference number: 2 (lower is better)
Translates to: ILNHGSALWGPSDVMAWATGPKL*SLPFAL
Trigger: CAGAGCAAAGGGAAGGCTTCAGAGCTTAGGCCCGGT...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCAGGAGCAGTGTTTTaGAAATGGCTGGGCGTGGTG +
Preference number: 2 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEAGAVF*KWLGVV
Trigger: CACCACGCCCAGCCATTTTCAAAACACTGCTCCTGC...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTGTGGAGCAAGGAAAATaGGTGGGAACGAGTTCTATT +
Preference number: 2 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCVEQGK*VGTSSI
Trigger: AATAGAACTCGTTCCCACTCATTTTCCTTGCTCCAC...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGAAACTCATCCTGGCCTaGCCCTTAGCCAGCACCTAC +
Preference number: 2 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEKLILA*PLASTY
Trigger: GTAGGTGCTGGCTAAGGGCCAGGCCAGGATGAGTTT...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAGATGTGACCTGGTCCTaGCTCACGGAGGGCCCTGGT +
Preference number: 2 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKDVTWS*LTEGPG
Trigger: ACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATC...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTCTGAGAGATGTGACCTaGTCCTGGCTCACGGAGGGC +
Preference number: 2 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRLRDVT*SWLTEG
Trigger: GCCCTCCGTGAGCCAGGACCAGGTCACATCTCTCAG...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTCAATTTAAGTTTCTCTaGGGCTCACCTCACATGAGG +
Preference number: 2 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCQFKFL*GSPHMR
Trigger: CCTCATGTGAGGTGAGCCCCAGAGAAACTTAAATTG...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 90 bp AGGCACTTGGCACCAAGGCCATGCCTCTTATTACTACCCGTGGCCTaGAGCAAGCTCATGAACCTCTCTCAGCCTCAACTGTCACGTTGG +
Preference number: 2 (lower is better)
Translates to: RHLAPRPCLLLLPVA*SKLMNLSQPQLSRW
Trigger: CCAACGTGACAGTTGAGGCTGAGAGAGGTTCATGAGCTTGCTCAAGGCCACGGGTAGTAATAAGAGGCATGGCCTTGGTGCCAAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCTCATCATGTCCCCTaGCACTCAACTTTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEAHHVP*HSTFSP
Trigger: TGGGGAGAAAGTTGAGTGTCAGGGGACATGATGAGC...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTAGCATGAGAATCGCTTaGACCTGGGAGGTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: ILNHGSALWGPSDVMAWASMRIA*TWEVAE
Trigger: CTCTGCCACCTCCCAGGTTCAAGCGATTCTCATGCT...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTAAGGGCAGTGGCCTCTaGGTGGTTTGTATGCAGGAG +
Preference number: 2 (lower is better)
Translates to: ILNHGSALWGPSDVMAWAKGSGL*VVCMQE
Trigger: CTCCTGCATACAAACCACTCAGAGGCCACTGCCCTT...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR GCA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGGGCATGCAGCTCCCCTaGTGGGGCACTGTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: ASTVTLVRASRQCFENQVGMQLP*WGTVCF
Trigger: GAAGCAGACAGTGCCCCAGCAGGGGAGCTGCATGCC...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCATAATTCTGTGGCCTaGGAACATTGGCACTCTATC +
Preference number: 2 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSHNSVA*EHWHSI
Trigger: GATAGAGTGCCAATGTTCCCAGGCCACAGAATTATG...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTCTTCCTACCTCTCTGTaGCTCTGCTCCTCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRLPTSL*LCSSPR
Trigger: CCTGGGAGAGGAGCAGAGCCACAGAGAGGTAGGAAG...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTAGGCCAGGAAGCTGCTaGTGCCACTATGCATGTGCT +
Preference number: 2 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRRPGSC*CHYACA
Trigger: AGCACATGCATAGTGGCATCAGCAGCTTCCTGGCCT...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATGAAGGTGCTGAGCCCTaGGGTCAGAGTGTCTTGGCC +
Preference number: 2 (lower is better)
Translates to: LSASTVTLVRASRQCFENEGAEP*GQSVLA
Trigger: GGCCAAGACACTCTGACCTCAGGGCTCAGCACCTTC...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCCCGAATTCTCCTGCTaGCCCCGCTTGCCCTCTTGT +
Preference number: 2 (lower is better)
Translates to: LSASTVTLVRASRQCFENPEFSC*PRLPSC
Trigger: ACAAGAGGGCAAGCGGGGTCAGCAGGAGAATTCGGG...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGAGGGCCCTGGTGGAGTaGGAGAACTGGAGAGTGGCT +
Preference number: 2 (lower is better)
Translates to: ASTVTLVRASRQCFENQVRALVE*ENWRVA
Trigger: AGCCACTCTCCAGTTCTCTCACTCCACCAGGGCCCT...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCTGGGTCGTTGGTATCTaGTTTAAAAGGAATTGCCTA +
Preference number: 2 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSWVVGI*FKRNCL
Trigger: TAGGCAATTCCTTTTAAATCAGATACCAACGACCCA...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGGTGCAGGGCACAGTGTaGTTGGGAGTAGGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: ASTVTLVRASRQCFENQVVQGTV*LGVGQE
Trigger: TTCCTGGCCTACTCCCAATCACACTGTGCCCTGCAC...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR GCA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATCATGGAGAGAACAGATaGCATCCGGTAACATTCACC +
Preference number: 2 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDHGENR*HPVTFT
Trigger: GGTGAATGTTACCGGATGGCATCTGTTCTCTCCATG...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR GCA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAACTGCTGATGCCACTATaGATGTGCTCAGAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKLLMPL*MCSEGL
Trigger: CAGCCCCTCTGAGCACATGCATAGTGGCATCAGCAG...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR GCA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGCTGGTGGGAAGACCCTaGCCACCTCTCAAGATCCAG +
Preference number: 2 (lower is better)
Translates to: ASTVTLVRASRQCFENQVLVGRP*PPLKIQ
Trigger: CTGGATCTTGAGAGGTGGGCAGGGTCTTCCCACCAG...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR GCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCACAACTGCACACCCTaGCACTGGTGGGAAGACCCT +
Preference number: 2 (lower is better)
Translates to: LSASTVTLVRASRQCFENHNCTP*HWWEDP
Trigger: AGGGTCTTCCCACCAGTGGCAGGGTGTGCAGTTGTG...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCATTTTTAAATGCTCCTaGCTCTCCTTTCTCTTTGCC +
Preference number: 2 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSIFKCS*LSFLFA
Trigger: GGCAAAGAGAAAGGAGAGCCAGGAGCATTTAAAAAT...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTGCTCCCTTGGTCAGGTaGGGGATGTTTCAGAGTCAT +
Preference number: 2 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRAPLVR*GMFQSH
Trigger: ATGACTCTGAAACATCCCCCACCTGACCAAGGGAGC...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATTGTCAGGCGTCAGATTaGTGGAGCAAGGAAAATGAG +
Preference number: 2 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDCQASD*WSKENE
Trigger: CTCATTTTCCTTGCTCCACCAATCTGACGCCTGACA...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 90 bp GGCCTTGAGCAAGCTCATGAACCTCTCTCAGCCTCAACTGTCACGTaGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGCCTGAC +
Preference number: 2 (lower is better)
Translates to: GLEQAHEPLSASTVT*VRASRQCFENQVPD
Trigger: GTCAGGCACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAGAGGTTCATGAGCTTGCTCAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR GCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATGCCTTAGTGATGGGCTaGCTTTCTGAGACTCCTGGG +
Preference number: 2 (lower is better)
Translates to: LSASTVTLVRASRQCFENALVMG*LSETPG
Trigger: CCCAGGAGTCTCAGAAAGGCAGCCCATCACTAAGGC...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTGTGGCCTGGGAACATTaGCACTCTATCTCCATGTCA +
Preference number: 2 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRVAWEH*HSISMS
Trigger: TGACATGGAGATAGAGTGCCAATGTTCCCAGGCCAC...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 90 bp ATCTTAACTCATGAGGGCTCTGTGAGCTCATCCCAGACTAGAGGTTaGAGCTCTCATCAGGTAAGTCTCCTCTCTGAGTCCACAGCAAGC +
Preference number: 2 (lower is better)
Translates to: ILTHEGSVSSSQTRG*SSHQVSLLSESTAS
Trigger: GCTTGCTGTGGACTCAGAGAGGAGACTTACCTGATGAGAGCTCAAACCTCTAGTCTGGGATGAGCTCACAGAGCCCTCATGAGTTAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR GCA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGCACCTCCCAGGTTCATaGCATTCTTCTGCCTCAGCT +
Preference number: 2 (lower is better)
Translates to: ASTVTLVRASRQCFENQVHLPGS*HSSASA
Trigger: AGCTGAGGCAGAAGAATGGCATGAACCTGGGAGGTG...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 90 bp GCTACACTGGACACACAGAACACAGCAGAGGAAAAACACACACATTaGGCAGATAACAGCAGAGAACACCAAGGGCTGTACGCTCTGTAC +
Preference number: 2 (lower is better)
Translates to: ATLDTQNTAEEKHTH*ADNSREHQGLYALY
Trigger: GTACAGAGCGTACAGCCCTTGGTGTTCTCTGCTGTTATCTGCCAAATGTGTGTGTTTTTCCTCTGCTGTGTTCTGTGTGTCCAGTGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATTTCAGGGTCCGAAAGTaGAATATCACTTTGGGATTT +
Preference number: 2 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDFRVRK*NITLGF
Trigger: AAATCCCAAAGTGATATTTCACTTTCGGACCCTGAA...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATGCCTCCATAATTCTGTaGCCTGGGAACATTGGCACT +
Preference number: 2 (lower is better)
Translates to: LSASTVTLVRASRQCFENASIIL*PGNIGT
Trigger: AGTGCCAATGTTCCCAGGCCACAGAATTATGGAGGC...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATTGTGAATACTGTGGGTaGGGCCTCCATAATTCTGTG +
Preference number: 2 (lower is better)
Translates to: LSASTVTLVRASRQCFENCEYCG*GLHNSV
Trigger: CACAGAATTATGGAGGCCTCACCCACAGTATTCACA...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR TCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATTTTCAGAGTCATAAATaGAGGCAGGTGTGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: LSASTVTLVRASRQCFENFQSHK*RQVWGG
Trigger: TCCTCCCCACACCTGCCTTCATTTATGACTCTGAAA...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGTCCAATAGGCTACACTaGACACACAGAACACAGCAG +
Preference number: 2 (lower is better)
Translates to: ASTVTLVRASRQCFENQVSNRLH*THRTQQ
Trigger: CTGCTGTGTTCTGTGTGTCCAGTGTAGCCTATTGGA...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR GCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATATGCTGATTTTTAAATaGTCCTGGCTCTCCTTTCTC +
Preference number: 2 (lower is better)
Translates to: LSASTVTLVRASRQCFENMLIFK*SWLSFL
Trigger: GAGAAAGGAGAGCCAGGAGCATTTAAAAATCAGCAT...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 90 bp AGAACACCAAGGGCTGTACGCTCTGTACCTCTCAGTAATGGGTCGTaGGTATCTGATTTAAAAGGAATTGCCTATGTGATATGGATGGAT +
Preference number: 2 (lower is better)
Translates to: RTPRAVRSVPLSNGS*VSDLKGIAYVIWMD
Trigger: ATCCATCCATATCACATAGGCAATTCCTTTTAAATCAGATACCAACGACCCATTACTGAGAGGTACAGAGCGTACAGCCCTTGGTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATGCAACTTTTGGTTTTTaGCAACTTCAGTACAAGCAA +
Preference number: 2 (lower is better)
Translates to: LSASTVTLVRASRQCFENATFGF*QLQYKQ
Trigger: TTGCTTGTACTGAAGTTGCCAAAAACCAAAAGTTGC...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 90 bp GAGGTGTGTTCAGGGCACAGTCTTAAAAATGACAACGGGCAACTTTaGGTTTTTGGCAACTTCAGTACAAGCAATTTAAGTTTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: EVCSGHSLKNDNGQL*VFGNFSTSNLSFSG
Trigger: CCCAGAGAAACTTAAATTGCTTGTACTGAAGTTGCCAAAAACCAAAAGTTGCCCGTTGTCATTTTTAAGACTGTGCCCTGAACACACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR TCA 72 bp TCATGGATGGAAGCCGGGGCTCCGTGGCACAGCATGTaGATCGGCGCGACCCCATCCCAAGAGCCAGGGCTC +
Preference number: 3 (lower is better)
Translates to: SWMEAGAPWHSM*IGATPSQEPGL
Trigger: GAGCCCTGGCTCTTGGGATGGGGTCGCGCCGATTCACATGCTGTGCCACGGAGCCCCGGCTTCCATCCATGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CAA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTACCCCGCTTGCCCTCTaGTTTCCAGCCTGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCTPLAL*FPAWEG
Trigger: CCCCTCCCAGGCTGGAAACAAGAGGGCAAGCGGGGT...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR TCA 72 bp TCTCTGTTGCCTGGGCCCAGCGTGGTGCCGTGGATGTaGGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTG +
Preference number: 3 (lower is better)
Translates to: SLLPGPSVVPWM*EFRQDHGPGCL
Trigger: CAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGCTGGGCCCAGGCAACAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR GCA 72 bp GCAGCCATTCCCTTTGCCTTCCCCAGGCAATCTCCCTaGCCTCCCTGCCCAGCCCTCCCGGTTGTAACTCTG +
Preference number: 3 (lower is better)
Translates to: AAIPFAFPRQSP*PPCPALPVVTL
Trigger: CAGAGTTACAACCGGGAGGGCTGGGCAGGGAGGGCAGGGAGATTGCCTGGGGAAGGCAAAGGGAATGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 72 bp CCGGGTGCCAGCCCATTCCCCATTCCCTCCAAGGCTTaGGACCACAACTGCACACCCTGCCACTGGTGGGAA +
Preference number: 3 (lower is better)
Translates to: PGASPFPIPSKA*DHNCTPCHWWE
Trigger: TTCCCACCAGTGGCAGGGTGTGCAGTTGTGGTCCCAAGCCTTGGAGGGAATGGGGAATGGGCTGGCACCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR GCA 72 bp CCATTCCCCATTCCCTCCAAGGCTTGGGACCACAACTaGACACCCTGCCACTGGTGGGAAGACCCTGCCCAC +
Preference number: 3 (lower is better)
Translates to: PFPIPSKAWDHN*TPCHWWEDPAH
Trigger: GTGGGCAGGGTCTTCCCACCAGTGGCAGGGTGTGCAGTTGTGGTCCCAAGCCTTGGAGGGAATGGGGAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR GCA 72 bp GGCTCTCCTTATCTCTGTTGCCTGGGCCCAGCGTGGTaGCGTGGATGTGAGAGTTTAGGCAGGACCACGGCC +
Preference number: 3 (lower is better)
Translates to: GSPYLCCLGPAW*RGCESLGRTTA
Trigger: GGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGCTGGGCCCAGGCAACAGAGATAAGGAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR GCA 72 bp CCCCATCCCAAGAGCCAGGGCTCTCCTTATCTCTGTTaGCTGGGCCCAGCGTGGTGCCGTGGATGTGAGAGT +
Preference number: 3 (lower is better)
Translates to: PHPKSQGSPYLC*LGPAWCRGCES
Trigger: ACTCTCACATCCACGGCACCACGCTGGGCCCAGGCAACAGAGATAAGGAGAGCCCTGGCTCTTGGGATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 72 bp AGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTaGAGTGAGAGAACTGGAGAGTGGCTCCCTTGGTCA +
Preference number: 3 (lower is better)
Translates to: RCDLVLAHGGPW*SERTGEWLPWS
Trigger: TGACCAAGGGAGCCACTCTCCAGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 72 bp CAGGGCTCTCCTTATCTCTGTTGCCTGGGCCCAGCGTaGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACG +
Preference number: 3 (lower is better)
Translates to: QGSPYLCCLGPA*CRGCESLGRTT
Trigger: CGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGCTGGGCCCAGGCAACAGAGATAAGGAGAGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR GCA 72 bp AGCTCTGCTGAAAGGCATCCAGCCTTAGTGATGGGCTaGCTTTCTGAGACTCCTGGGGGCATGCAGCTCCCC +
Preference number: 3 (lower is better)
Translates to: SSAERHPALVMG*LSETPGGMQLP
Trigger: GGGGAGCTGCATGCCCCCAGGAGTCTCAGAAAGGCAGCCCATCACTAAGGCTGGATGCCTTTCAGCAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR GCA 72 bp AATCAAGTGCCTGACCCACGGCAGGCACCTAACACATaGTCCATGGCGCATGGGCAGAGGTGTGTTCAGGGC +
Preference number: 3 (lower is better)
Translates to: NQVPDPRQAPNT*SMAHGQRCVQG
Trigger: GCCCTGAACACACCTCTGCCCATGCGCCATGGAGCATGTGTTAGGTGCCTGCCGTGGGTCAGGCACTTGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 72 bp AGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTaGCACCAAGGCCATGCCTCTTATTACTACCCGTGG +
Preference number: 3 (lower is better)
Translates to: RTTAPAVCLGGT*HQGHASYYYPW
Trigger: CCACGGGTAGTAATAAGAGGCATGGCCTTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 72 bp GCGCATGACCCCATCTTAAACCACGGCTCAGCTCTCTaGGGTCCATCAGATGTGATGGCATGGGCTCAGAGC +
Preference number: 3 (lower is better)
Translates to: AHDPILNHGSAL*GPSDVMAWAQS
Trigger: GCTCTGAGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGATGGGGTCATGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 72 bp ATGGGCAGTGGGTTCTCTGACTACACAGGAGGCCGGTaGGAGGGGAGTCTGAAGGGGAGAGTCAAAGGCAAT +
Preference number: 3 (lower is better)
Translates to: MGSGFSDYTGGR*EGSLKGRVKGN
Trigger: ATTGCCTTTGACTCTCCCCTTCAGACTCCCCTCCCACCGGCCTCCTGTGTAGTCAGAGAACCCACTGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 72 bp TTTCCCAATTATCCCGCCACAGGGGCACATCATGGATaGAAGCCGGGGCTCCGTGGCACAGCATGTGAATCG +
Preference number: 3 (lower is better)
Translates to: FPNYPATGAHHG*KPGLRGTACES
Trigger: CGATTCACATGCTGTGCCACGGAGCCCCGGCTTCCATCCATGATGTGCCCCTGTGGCGGGATAATTGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CAA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATTGCTGGGGTTCCCCCTaGGTGGGAGGTGCAGGGCAC +
Preference number: 3 (lower is better)
Translates to: LSASTVTLVRASRQCFENCWGSP*VGGAGH
Trigger: GTGCCCTGCACCTCCCACCAAGGGGGAACCCCAGCA...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CAA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGCATTCCCTCCAAGGCTaGGGACCACAACTGCACACC +
Preference number: 3 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEHSLQG*GPQLHT
Trigger: GGTGTGCAGTTGTGGTCCCAAGCCTTGGAGGGAATG...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CAA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTTGGAGAGTGGCTCCCTaGGTCAGGTGGGGGATGTTT +
Preference number: 3 (lower is better)
Translates to: ILNHGSALWGPSDVMAWAWRVAP*VRWGMF
Trigger: AAACATCCCCCACCTGACCAAGGGAGCCACTCTCCA...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR GCA 72 bp GGCTGTTTGTTTGGGAGGCACTTGGCACCAAGGCCATaGCTCTTATTACTACCCGTGGCCTTGAGCAAGCTC +
Preference number: 3 (lower is better)
Translates to: GCLFGRHLAPRP*LLLLPVALSKL
Trigger: GAGCTTGCTCAAGGCCACGGGTAGTAATAAGAGGCATGGCCTTGGTGCCAAGTGCCTCCCAAACAAACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CAA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGTTCCTCCCCACAGCCTaGATGGCTCCTGAGCCCCCA +
Preference number: 3 (lower is better)
Translates to: ASTVTLVRASRQCFENQVFLPTA*MAPEPP
Trigger: TGGGGGCTCAGGAGCCATCAAGGCTGTGGGGAGGAA...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR TCA 72 bp TTGGAGATACTCAAGACTGTGGGAATGACCAGCGCATaGCCCCATCTTAAACCACGGCTCAGCTCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: LEILKTVGMTSA*PHLKPRLSSLG
Trigger: CCCCAGAGAGCTGAGCCGTGGTTTAAGATGGGGTCATGCGCTGGTCATTCCCACAGTCTTGAGTATCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR TCA 72 bp ACAAGCAATTTAAGTTTCTCTGGGGCTCACCTCACATaGGGCACAGGATTGATGGGGGCTGGAAGCAAGCCG +
Preference number: 3 (lower is better)
Translates to: TSNLSFSGAHLT*GTGLMGAGSKP
Trigger: CGGCTTGCTTCCAGCCCCCATCAATCCTGTGCCTCATGTGAGGTGAGCCCCAGAGAAACTTAAATTGCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR GCA 72 bp ACAGAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATaGAGGAGCAGTGTTTTGAAAATGGCTGGGCGTGGT +
Preference number: 3 (lower is better)
Translates to: TEPRAVASEWFV*RSSVLKMAGRG
Trigger: ACCACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 72 bp CCTTTCTCTTTGCCCCATTCCTGTTTCAGGGCCAACTaGCTCATCATGTCCCCTGACACTCAACTTTCTCCC +
Preference number: 3 (lower is better)
Translates to: PFSLPHSCFRAN*LIMSPDTQLSP
Trigger: GGGAGAAAGTTGAGTGTCAGGGGACATGATGAGCCAGTTGGCCCTGAAACAGGAATGGGGCAAAGAGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 72 bp CCCTGGTGGAGTGAGAGAACTGGAGAGTGGCTCCCTTaGTCAGGTGGGGGATGTTTCAGAGTCATAAATGAA +
Preference number: 3 (lower is better)
Translates to: PWWSERTGEWLP*SGGGCFRVINE
Trigger: TTCATTTATGACTCTGAAACATCCCCCACCTGACCAAGGGAGCCACTCTCCAGTTCTCTCACTCCACCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CAA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATAGCACTCTGAGATTCTaGGGCCAAAAAGCACTCGAA +
Preference number: 3 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDSTLRF*GQKALE
Trigger: TTCGAGTGCTTTTTGGCCCAAGAATCTCAGAGTGCT...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CAA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTGGGTGTGGAATGGTTTaGCTGTTAGTAACCCTGGGG +
Preference number: 3 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRGCGMV*LLVTLG
Trigger: CCCCAGGGTTACTAACAGCAAAACCATTCCACACCC...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR TCA 72 bp TCTCAAAGGCCAGTTGAGAGCTGTGAATACTGTGGGTaGGGCCTCCATAATTCTGTGGCCTGGGAACATTGG +
Preference number: 3 (lower is better)
Translates to: SQRPVESCEYCG*GLHNSVAWEHW
Trigger: CCAATGTTCCCAGGCCACAGAATTATGGAGGCCTCACCCACAGTATTCACAGCTCTCAACTGGCCTTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 72 bp CCTTCAGGCAGTGGTGACATCTGTCAGGCGTCAGATTaGTGGAGCAAGGAAAATGAGTGGGAACGAGTTCTA +
Preference number: 3 (lower is better)
Translates to: PSGSGDICQASD*WSKENEWERVL
Trigger: TAGAACTCGTTCCCACTCATTTTCCTTGCTCCACCAATCTGACGCCTGACAGATGTCACCACTGCCTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CAA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTTCCCAGACTAGAGGTTaGAGCTCTCATCAGGTAAGT +
Preference number: 3 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRSQTRG*SSHQVS
Trigger: ACTTACCTGATGAGAGCTCAAACCTCTAGTCTGGGA...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR TCA 72 bp GCTCAGAGCCATCACAGAACCAAGGGCAGTGGCCTCTaGGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: AQSHHRTKGSGL*VVCMQEQCFEN
Trigger: ATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTCTGTGATGGCTCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 72 bp TCAGGCAGTGGTGACATCTGTCAGGCGTCAGATTGGTaGAGCAAGGAAAATGAGTGGGAACGAGTTCTATTC +
Preference number: 3 (lower is better)
Translates to: SGSGDICQASDW*SKENEWERVLF
Trigger: GAATAGAACTCGTTCCCACTCATTTTCCTTGCTCCACCAATCTGACGCCTGACAGATGTCACCACTGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CAA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGTCTGAAGCCTTCCCTTaGCTCTGCCTCAACTTCCTA +
Preference number: 3 (lower is better)
Translates to: ASTVTLVRASRQCFENQVSEAFP*LCLNFL
Trigger: TAGGAAGTTGAGGCAGAGCAAAGGGAAGGCTTCAGA...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CAA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGTATCACTTTGGGATTTaGGAGATACTCAAGACTGTG +
Preference number: 3 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEYHFGI*EILKTV
Trigger: CACAGTCTTGAGTATCTCCAAAATCCCAAAGTGATA...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR TCA 72 bp ACTTTGGGATTTTGGAGATACTCAAGACTGTGGGAATaGCCAGCGCATGACCCCATCTTAAACCACGGCTCA +
Preference number: 3 (lower is better)
Translates to: TLGFWRYSRLWE*PAHDPILNHGS
Trigger: TGAGCCGTGGTTTAAGATGGGGTCATGCGCTGGTCATTCCCACAGTCTTGAGTATCTCCAAAATCCCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CAA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGGAAGGGGGAGTCTTCTaGCTTTTAAACTGGCATGAT +
Preference number: 3 (lower is better)
Translates to: ASTVTLVRASRQCFENQVEGGVF*LLNWHD
Trigger: ATCATGCCAGTTTAAAAGCAAGAAGACTCCCCCTTC...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 72 bp ACACACAGAACACAGCAGAGGAAAAACACACACATTTaGCAGATAACAGCAGAGAACACCAAGGGCTGTACG +
Preference number: 3 (lower is better)
Translates to: THRTQQRKNTHI*QITAENTKGCT
Trigger: CGTACAGCCCTTGGTGTTCTCTGCTGTTATCTGCCAAATGTGTGTGTTTTTCCTCTGCTGTGTTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CCA 72 bp TTTTGGCAACTTCAGTACAAGCAATTTAAGTTTCTCTaGGGCTCACCTCACATGAGGCACAGGATTGATGGG +
Preference number: 3 (lower is better)
Translates to: FWQLQYKQFKFL*GSPHMRHRIDG
Trigger: CCCATCAATCCTGTGCCTCATGTGAGGTGAGCCCCAGAGAAACTTAAATTGCTTGTACTGAAGTTGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR-3UTR CAA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCTCAGTAATGGGTCGTaGGTATCTGATTTAAAAGGA +
Preference number: 3 (lower is better)
Translates to: LSASTVTLVRASRQCFENLSNGS*VSDLKG
Trigger: TCCTTTTAAATCAGATACCAACGACCCATTACTGAG...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGGAGGCCTCCACGATGTaGGAGTTGCGGAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGEASTM*ELRRSP
Trigger: GGGCGACCTCCGCAACTCCCACATCGTGGAGGCCTC...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCGTCCCAGGCGAGTGCTaGCCTCAGCCGGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSVPGEC*PQPEGS
Trigger: GGAGCCCTCCGGCTGAGGCCAGCACTCGCCTGGGAC...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 72 bp GCCGGGTGCCAGCCCATTCCCCATTCCCTCCAAGGCTaGGGACCACAACTGCACACCCTGCCACTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: AGCQPIPHSLQG*GPQLHTLPLVG
Trigger: TCCCACCAGTGGCAGGGTGTGCAGTTGTGGTCCCAAGCCTTGGAGGGAATGGGGAATGGGCTGGCACCCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 72 bp GAGGAGCCAGGCCGCTGTCCAGGTGCAAGGCCAGCTTaGCCTTCGCCTTCCCTCCCTCGCTTAGTTGACCCC +
Preference number: 4 (lower is better)
Translates to: EEPGRCPGARPA*PSPSLPRLVDP
Trigger: GGGGTCAACTAAGCGAGGGAGGGAAGGCGAAGGCAAAGCTGGCCTTGCACCTGGACAGCGGCCTGGCTCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGTGCTTCTGCTTTCCCTaGGCCGGGTGCCAGCCCATT +
Preference number: 4 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGCFCFP*AGCQPI
Trigger: AATGGGCTGGCACCCGGCTCAGGGAAAGCAGAAGCA...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCAGGCAGGATGCCACTaGCTCAGGGAGGCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSQAGCH*LREALC
Trigger: GCACAGGGCCTCCCTGAGCCAGTGGCATCCTGCCTG...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGAGGGGCACATCATGGATaGAAGCCGGGGCTCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PTSQDPAQEQSLWSPSLGGAHHG*KPGLRG
Trigger: GCCACGGAGCCCCGGCTTCCATCCATGATGTGCCCC...TCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCTGGCGTGGCTTCTTaGCCTCGGCCAGCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEAGVAS*PRPAGA
Trigger: CGCGCCTGCTGGCCGAGGGCAAGAAGCCACGCCAGC...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTGGCATGCAGCTCCCCTaGTGGGGCACTGTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTGMQLP*WGTVCF
Trigger: GAAGCAGACAGTGCCCCAGCAGGGGAGCTGCATGCC...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTAGGCCGCTGTCCAGGTaGAAGGCCAGCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCRPLSR*KASFAF
Trigger: GAAGGCAAAGCTGGCCTTGCACCTGGACAGCGGCCT...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGTCTCCTTATCTCTGTTaGCTGGGCCCAGCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGSPYLC*LGPAWC
Trigger: GCACCACGCTGGGCCCAGGCAACAGAGATAAGGAGA...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGACCAGGCAGGGAGCTTTaGCAGAGGACCCTCTGCACG +
Preference number: 4 (lower is better)
Translates to: PTSQDPAQEQSLWSPSLGPGREL*QRTLCT
Trigger: CGTGCAGAGGGTCCTCTGCCAAAGCTCCCTGCCTGG...TCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCAGGGCCCTGGTGGAGTaGGAGAACTGGAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSRALVE*ENWRVA
Trigger: AGCCACTCTCCAGTTCTCTCACTCCACCAGGGCCCT...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAAGGGCAGTGGGTTCTCTaGCTACACAGGAGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQGQWVL*LHRRPV
Trigger: CACCGGCCTCCTGTGTAGTCAGAGAACCCACTGCCC...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTGGGGCTCACCTCACATaGGGCACAGGATTGATGGGG +
Preference number: 4 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTGAHLT*GTGLMG
Trigger: CCCCATCAATCCTGTGCCTCATGTGAGGTGAGCCCC...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTGGGGCCCAGGCAGGATaGCACTGGCTCAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ILNHGSALWGPSDVMAWAGAQAG*HWLREA
Trigger: GGCCTCCCTGAGCCAGTGGCATCCTGCCTGGGCCCC...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTCCTGCTGACCCCGCTTaGCCTCTTGTTTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTPADPA*PLVSSL
Trigger: CAGGCTGGAAACAAGAGGGCAAGCGGGGTCAGCAGG...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTCTGGTGGGAAGACCCTaGCCACCTCTCAAGATCCAG +
Preference number: 4 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCLVGRP*PPLKIQ
Trigger: CTGGATCTTGAGAGGTGGGCAGGGTCTTCCCACCAG...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTGGAGTCCCAGGCGAGTaGTGGCCTCAGCCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: ILNHGSALWGPSDVMAWAGVPGE*WPQPEG
Trigger: GCCCTCCGGCTGAGGCCAGCACTCGCCTGGGACTCC...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGGGAGGTGGCAGAGGTTaGAGTGAGCTGAGGTTGTAC +
Preference number: 4 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGGGGRG*SELRLY
Trigger: GTACAACCTCAGCTCACTGCAACCTCTGCCACCTCC...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGACTGGTGTGAATCGGTaGCCCCAGAGCACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGTGVNR*PQSTSV
Trigger: TACAGAGGTGCTCTGGGGCCACCGATTCACACCAGT...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGGAGGTCAGAGTGTCTTaGCCACAACTGGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGEVRVS*PQLGQM
Trigger: CATCTGCCCCAGTTGTGGCCAAGACACTCTGACCTC...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAAACACCCTGCCACTGGTaGGAAGACCCTGCCCACCTC +
Preference number: 4 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQTPCHW*EDPAHL
Trigger: GAGGTGGGCAGGGTCTTCCCACCAGTGGCAGGGTGT...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAAGATGTGACCTGGTCCTaGCTCACGGAGGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQDVTWS*LTEGPG
Trigger: ACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATC...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAAGGTCCACCAGGGTGGTaGAGAGGTCACTCAGGTACC +
Preference number: 4 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQGPPGW*RGHSGT
Trigger: GGTACCTGAGTGACCTCTTCACCACCCTGGTGGACC...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCGTGCAGGGCACAGTGTaGTTGGGAGTAGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSVQGTV*LGVGQE
Trigger: TTCCTGGCCTACTCCCAATCACACTGTGCCCTGCAC...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTGCAGGAGCAGTGTTTTaGAAATGGCTGGGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCAGAVF*KWLGVV
Trigger: CACCACGCCCAGCCATTTTCAAAACACTGCTCCTGC...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTGTGGTGCCGTGGATGTaGGAGTTTAGGCAGGACCAC +
Preference number: 4 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTVVPWM*EFRQDH
Trigger: GTGGTCCTGCCTAAACTCTCACATCCACGGCACCAC...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGCCCAGCGTGGTaGCGTGGATGTGAGAGTTTA +
Preference number: 4 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSLGPAW*RGCESL
Trigger: TAAACTCTCACATCCACGGCACCACGCTGGGCCCAG...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCTGGGGTTCCCCCTTaGTGGGAGGTGCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEAGVPP*WEVQGT
Trigger: TGTGCCCTGCACCTCCCACCAAGGGGGAACCCCAGC...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCGAGAGAACTGGAGAGTaGCTCCCTTGGTCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSERTGE*LPWSGG
Trigger: CCCACCTGACCAAGGGAGCCACTCTCCAGTTCTCTC...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAACTGAGAGATGTGACCTaGTCCTGGCTCACGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQLRDVT*SWLTEG
Trigger: GCCCTCCGTGAGCCAGGACCAGGTCACATCTCTCAG...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGAATGCTCCATGGCGCATaGGCAGAGGTGTGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PTSQDPAQEQSLWSPSLGMLHGA*AEVCSG
Trigger: CCCTGAACACACCTCTGCCCATGCGCCATGGAGCAT...TCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 72 bp CAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTaGGCACCAAGGCCATGCCTCTTATTACTACCCGTG +
Preference number: 4 (lower is better)
Translates to: QDHGPGCLFGRH*APRPCLLLLPV
Trigger: CACGGGTAGTAATAAGAGGCATGGCCTTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCTCTGGTTCAGGGGGATaGACTCCCCCTCTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSSGSGG*TPPLWS
Trigger: AGACCAAAGAGGGGGAGTTCATCCCCCTGAACCAGA...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTGTCAAAGCCCACGTTaGTGTCTGTCTGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCCQSPR*CLSGSG
Trigger: CCCTGAACCAGACAGACATCAACGTGGGCTTTGACA...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTAGGCCAGGAAGCTGCTaGTGCCACTATGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTRPGSC*CHYACA
Trigger: AGCACATGCATAGTGGCATCAGCAGCTTCCTGGCCT...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp CCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGAGGAATGACCAGCGCATaGCCCCATCTTAAACCACGG +
Preference number: 4 (lower is better)
Translates to: PTSQDPAQEQSLWSPSLGGMTSA*PHLKPR
Trigger: CCGTGGTTTAAGATGGGGTCATGCGCTGGTCATTCC...TCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCTCCCCCTCTTTGGTCTaGCGGGACTTGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSSPSLV*RDLMSL
Trigger: CAAGCTCATCAAGTCCCGGCAGACCAAAGAGGGGGA...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGCTGATGCCACTATaGATGTGCTCAGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSLLMPL*MCSEGL
Trigger: CAGCCCCTCTGAGCACATGCATAGTGGCATCAGCAG...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGCGGGACCTGACAATCTaGCCCCCTCCACCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLERDLTI*PPPPLL
Trigger: GAGCAAGGGTGGAGGGGGGCAGATTGTCAGGTCCCG...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTCTCCAGCAAGGTAACTaGTCAAGCCAGGACCTCAAC +
Preference number: 4 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCLQQGN*SSQDLN
Trigger: GTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGAG...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCTTCCAAGGTGAGGACTaGTGTGAATCGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSFQGED*CESVAP
Trigger: TGGGGCCACCGATTCACACCAGTCCTCACCTTGGAA...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTCTCACACCGAGCCCCTaGCCTCCCTGGACCCACCCA +
Preference number: 4 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRLTPSP*PPWTHP
Trigger: TGGGTGGGTCCAGGGAGGCCAGGGGCTCGGTGTGAG...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGGTGGCCTGGGAACATTaGCACTCTATCTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGVAWEH*HSISMS
Trigger: TGACATGGAGATAGAGTGCCAATGTTCCCAGGCCAC...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAACAGGAGCAAAGCTTATaGAGCCCCTCCCTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQQEQSL*SPSLGV
Trigger: CACTCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTG...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCGCTCATCATGTCCCCTaGCACTCAACTTTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSAHHVP*HSTFSP
Trigger: TGGGGAGAAAGTTGAGTGTCAGGGGACATGATGAGC...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGGATGGGCTGCCTTTCTaGGACTCCTGGGGGCATGCA +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEDGLPF*DSWGHA
Trigger: TGCATGCCCCCAGGAGTCTCAGAAAGGCAGCCCATC...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGGGGGTCCATCAGATGTaGTGGCATGGGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEGVHQM*WHGLRA
Trigger: GGCTCTGAGCCCATGCCATCACATCTGATGGACCCC...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGGGCTTGGCAGGTCATaGCTGTGGCTTCCACCATCC +
Preference number: 4 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEGLGRS*LWLPPS
Trigger: GGATGGTGGAAGCCACAGGCATGACCTGCCAAGCCC...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGCCCCTTGGTGGGAGGTaGAGGGCACAGTGTGATTGG +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEPLGGR*RAQCDW
Trigger: CCAATCACACTGTGCCCTGCACCTCCCACCAAGGGG...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGGCTTGGGACCACAACTaGACACCCTGCCACTGGTGG +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEAWDHN*TPCHWW
Trigger: CCACCAGTGGCAGGGTGTGCAGTTGTGGTCCCAAGC...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGAGGCAATGCCCATTCTaGCCTGGCCTGGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLERQCPF*PGLGTG
Trigger: TCCTGTCCCCAGGCCAGGGCAGAATGGGCATTGCCT...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCGTTTTGAGAATCAAGTaGCTGACCCACGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSVLRIK*LTHGRH
Trigger: GTGCCTGCCGTGGGTCAGGCACTTGATTCTCAAAAC...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTGGGGTTCCCCCTTGGTaGGAGGTGCAGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRGVPPW*EVQGTV
Trigger: CACTGTGCCCTGCACCTCCCACCAAGGGGGAACCCC...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAAATTCCCTCCAAGGCTTaGGACCACAACTGCACACCC +
Preference number: 4 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQIPSKA*DHNCTP
Trigger: GGGTGTGCAGTTGTGGTCCCAAGCCTTGGAGGGAAT...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGAGCTCCCTTGGTCAGGTaGGGGATGTTTCAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: PTSQDPAQEQSLWSPSLGAPLVR*GMFQSH
Trigger: ATGACTCTGAAACATCCCCCACCTGACCAAGGGAGC...TCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGGCTCACGGAGGGCCCTaGTGGAGTGAGAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEAHGGP*WSERTG
Trigger: TCCAGTTCTCTCACTCCACCAGGGCCCTCCGTGAGC...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGACAGTGCTCCCCAGATaGCAGGGGCTCCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLETVLPR*QGLLFS
Trigger: GGAGAAGAGGAGCCCCTGCCATCTGGGGAGCACTGT...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGCTTATCTCTGTTGCCTaGGCCCAGCGTGGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: SSKVTAQARTSTSKQQQELISVA*AQRGAV
Trigger: CACGGCACCACGCTGGGCCCAGGCAACAGAGATAAG...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 72 bp GAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTaGGGAGGCACTTGGCACCAAGGCCATGCCTCTTAT +
Preference number: 4 (lower is better)
Translates to: ESLGRTTAPAVC*GGTWHQGHASY
Trigger: ATAAGAGGCATGGCCTTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTCGTTGTTGGAAAACATaGGGGTCTCCGCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTRCWKT*GSPLSS
Trigger: AGAAGAGAGCGGAGACCCTCATGTTTTCCAACAACG...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAAGCCTGGCCCAGATGCTaGTTTTTAAATGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQAWPRC*FLNAPG
Trigger: GCCAGGAGCATTTAAAAATCAGCATCTGGGCCAGGC...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTCCCGAATTCTCCTGCTaGCCCCGCTTGCCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: ILNHGSALWGPSDVMAWAPEFSC*PRLPSC
Trigger: ACAAGAGGGCAAGCGGGGTCAGCAGGAGAATTCGGG...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTGTGAATACTGTGGGTaGGGCCTCCATAATTCTGTG +
Preference number: 4 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCCEYCG*GLHNSV
Trigger: CACAGAATTATGGAGGCCTCACCCACAGTATTCACA...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCGATTTCCTCAGGATGTaGAGGGGGAGTCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSDFLRM*RGSLLA
Trigger: AGCAAGAAGACTCCCCCTTCACATCCTGAGGAAATC...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTGAACGAGTTCTATTCTaGGTTCCTGGAGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTERVLF*VPGGFS
Trigger: GGAGAAGCCTCCAGGAACTCAGAATAGAACTCGTTC...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAAGGTGCACGTTGCACTTaGCACTCTTCTCCATGTAGC +
Preference number: 4 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQGARCT*HSSPCS
Trigger: GCTACATGGAGAAGAGTGGCAAGTGCAACGTGCACC...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGTGGACGTTGCCGTGGTaGACGTTGCACTTGCCACTC +
Preference number: 4 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEWTLPW*TLHLPL
Trigger: GAGTGGCAAGTGCAACGTGCACCACGGCAACGTCCA...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGCCCAGGCAATCTCCCTaGCCTCCCTGCCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ASTVTLVRASRQCFENQVPRQSP*PPCPAL
Trigger: GAGGGCTGGGCAGGGAGGGCAGGGAGATTGCCTGGG...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGCACAACTGCACACCCTaGCACTGGTGGGAAGACCCT +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEHNCTP*HWWEDP
Trigger: AGGGTCTTCCCACCAGTGGCAGGGTGTGCAGTTGTG...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGCGGAGGAGCTGTAGCTaGAACCTCTCCCTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLERRSCS*NLSLLW
Trigger: CCACAACAGGGAGAGGTTCCAGCTACAGCTCCTCCG...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATGGCGCGTACGGTCTGTaGCAATGGGGACATAATCGC +
Preference number: 4 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDGAYGL*QWGHNR
Trigger: GCGATTATGTCCCCATTGCCACAGACCGTACGCGCC...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGTCCTGGACGTTGCCGTaGTGCACGTTGCACTTGCCA +
Preference number: 4 (lower is better)
Translates to: SSKVTAQARTSTSKQQQESWTLP*CTLHLP
Trigger: TGGCAAGTGCAACGTGCACCACGGCAACGTCCAGGA...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATGGGCTGGGGAGGTACTaGAGGAGCCGGCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENGLGRY*RSRPSL
Trigger: GAGGGAAGGCCGGCTCCTCCAGTACCTCCCCAGCCC...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGAATCGCCAGCCATAGCTaGGATGTTGTTGAGATCGGA +
Preference number: 4 (lower is better)
Translates to: PTSQDPAQEQSLWSPSLGIASHS*DVVEIG
Trigger: TCCGATCTCAACAACATCCCAGCTATGGCTGGCGAT...TCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGGCAGAGGAGGCACACTaGGGCGGTGTTGCACTAATC +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEAEEAH*GGVALI
Trigger: GATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGC...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTTGCCTGGGCCCAGCGTaGTGCCGTGGATGTGAGAGT +
Preference number: 4 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRCLGPA*CRGCES
Trigger: ACTCTCACATCCACGGCACCACGCTGGGCCCAGGCA...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTGAAGGTGCTGAGCCCTaGGGTCAGAGTGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VASEWFVCRSSVLKMAGREGAEP*GQSVLA
Trigger: GGCCAAGACACTCTGACCTCAGGGCTCAGCACCTTC...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATCAGGAGGCTGAAGCATaGGAATCGCTTGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDQEAEA*ESLEPG
Trigger: CCCAGGTTCAAGCGATTCTCATGCTTCAGCCTCCTG...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGTCCTTCAGGCAGTGGTaGCATCTGTCAGGCGTCAGA +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLESFRQW*HLSGVR
Trigger: TCTGACGCCTGACAGATGTCACCACTGCCTGAAGGA...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGCCGTGGCACAGCATGTaGATCGGCGCGACCCCATCC +
Preference number: 4 (lower is better)
Translates to: ASTVTLVRASRQCFENQVPWHSM*IGATPS
Trigger: GGATGGGGTCGCGCCGATTCACATGCTGTGCCACGG...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGTGCCGTGGTGCACGTTaGACTTGCCACTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSKVTAQARTSTSKQQQECRGAR*TCHSSP
Trigger: TGGAGAAGAGTGGCAAGTGCAACGTGCACCACGGCA...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGCCACGATGTGGGAGTTaGGGAGGTCGCCCACCCGGA +
Preference number: 4 (lower is better)
Translates to: ASTVTLVRASRQCFENQVPRCGS*GGRPPG
Trigger: TCCGGGTGGGCGACCTCCGCAACTCCCACATCGTGG...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATGCACTAATCCCAGCATaGCCGGGCTCGGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENALIPA*PGSGQA
Trigger: TGCCTGGCCCGAGCCCGGGCATGCTGGGATTAGTGC...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGGAGAGTCAAAGGCAATaGCCATTCTGCCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEESQRQ*PFCPGL
Trigger: CAGGCCAGGGCAGAATGGGCATTGCCTTTGACTCTC...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGTCTTGGTCGCCAACATaGTCCAGGTCACCCCGGATA +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLESWSPT*SRSPRI
Trigger: TATCCGGGGTGACCTGGACCATGTTGGCGACCAAGA...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTCCCCGGCTGTTTGTTTaGGAGGCACTTGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: ILNHGSALWGPSDVMAWAPRLFV*EALGTK
Trigger: CTTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGG...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAACACAGGGGCACATCATaGATGGAAGCCGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKHRGTS*MEAGAP
Trigger: CGGAGCCCCGGCTTCCATCCATGATGTGCCCCTGTG...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 72 bp ACAGGCTTAGATCTGGCAAGGGGGTGTGGAATGGTTTaGCTGTTAGTAACCCTGGGGTCCAGGGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: TGLDLARGCGMV*LLVTLGSRESQ
Trigger: CTGGGACTCCCTGGACCCCAGGGTTACTAACAGCAAAACCATTCCACACCCCCTTGCCAGATCTAAGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGTGGGTCGTTGGTATCTaGTTTAAAAGGAATTGCCTA +
Preference number: 4 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGWVVGI*FKRNCL
Trigger: TAGGCAATTCCTTTTAAATCAGATACCAACGACCCA...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGTTCAGGGTCCGAAAGTaGAATATCACTTTGGGATTT +
Preference number: 4 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGFRVRK*NITLGF
Trigger: AAATCCCAAAGTGATATTTCACTTTCGGACCCTGAA...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTACACTGGGGCGGTGTTaGACTAATCCCAGCATGCCC +
Preference number: 4 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRTLGRC*TNPSMP
Trigger: GGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGT...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTTACGGTCTGTGGCAATaGGGACATAATCGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: ILNHGSALWGPSDVMAWAYGLWQ*GHNRGP
Trigger: AGGCCCGCGATTATGTCCCCATTGCCACAGACCGTA...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCATGTAGCGCTGGCGTaGCTTCTTGCCCTCGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENHVALA*LLALGQ
Trigger: CTGGCCGAGGGCAAGAAGCCACGCCAGCGCTACATG...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGCAAGGAATCCACTCTTaGTCGCCAACATGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEQGIHS*SPTWSR
Trigger: CCTGGACCATGTTGGCGACCAAGAGTGGATTCCTTG...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAAGCTCTCTTCTTGGGCTaGCTGATCTTGACAAACATG +
Preference number: 4 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQALFLG*LILTNM
Trigger: CATGTTTGTCAAGATCAGCCAGCCCAAGAAGAGAGC...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTGGGAGCTGTGAGGGCTaGGTTTATGGTTCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRGSCEG*VYGSSP
Trigger: TGGGGAGGAACCATAAACCCAGCCCTCACAGCTCCC...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATGCAGTGGCCTCTGAGTaGTTTGTATGCAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDAVASE*FVCRSS
Trigger: ACTGCTCCTGCATACAAACCACTCAGAGGCCACTGC...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp AGGGGCTGTCTAGTCCCAGGCCACCTTCTAAGAGTCACTCTAATGAGACCGATTATGCCCATTCTGCCCTaGCCTGGGGACAGGATCCTT +
Preference number: 4 (lower is better)
Translates to: RGCLVPGHLLRVTLMRPIMPILP*PGDRIL
Trigger: AAGGATCCTGTCCCCAGGCCAGGGCAGAATGGGCAT...AATCGGTCTCATTAGAGTGACTCTTAGAAGGTGGCCTGGGACTAGACAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGAAGCAGTGCAGTGCAGTaGTGTTCTTTTGCATACGAA +
Preference number: 4 (lower is better)
Translates to: PTSQDPAQEQSLWSPSLGSSAVQ*CSFAYE
Trigger: TTCGTATGCAAAAGAACACCACTGCACTGCACTGCT...TCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 72 bp GCACCAAGGCCATGCCTCTTATTACTACCCGTGGCCTaGAGCAAGCTCATGAACCTCTCTCAGCCTCAACTG +
Preference number: 4 (lower is better)
Translates to: APRPCLLLLPVA*SKLMNLSQPQL
Trigger: CAGTTGAGGCTGAGAGAGGTTCATGAGCTTGCTCAAGGCCACGGGTAGTAATAAGAGGCATGGCCTTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp AGGGGCTGTCTAGTCCCAGGCCACCTTCTAAGAGTCACTCTAATGAGACCGATTGGTAAGTCTCCTCTCTaGGTCCACAGCAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGCLVPGHLLRVTLMRPIGKSPL*VHSKPQ
Trigger: CTGAGGCTTGCTGTGGACTCAGAGAGGAGACTTACC...AATCGGTCTCATTAGAGTGACTCTTAGAAGGTGGCCTGGGACTAGACAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGCCTAGAAAACACTTCTaGGATGAACCGGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEPRKHF*DEPGLS
Trigger: GCTTAGGCCCGGTTCATCTCAGAAGTGTTTTCTAGG...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTAGCATGAGAATCGCTTaGACCTGGGAGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRSMRIA*TWEVAE
Trigger: CTCTGCCACCTCCCAGGTTCAAGCGATTCTCATGCT...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp AGGGGCTGTCTAGTCCCAGGCCACCTTCTAAGAGTCACTCTAATGAGACCGATTTCAAGACTGTGGGAATaGCCAGCGCATGACCCCATC +
Preference number: 4 (lower is better)
Translates to: RGCLVPGHLLRVTLMRPISRLWE*PAHDPI
Trigger: GATGGGGTCATGCGCTGGTCATTCCCACAGTCTTGA...AATCGGTCTCATTAGAGTGACTCTTAGAAGGTGGCCTGGGACTAGACAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTAGGCGTGAGCCATCTTaGCTGGCCCAGATGCTGATT +
Preference number: 4 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRRREPS*LAQMLI
Trigger: AATCAGCATCTGGGCCAGGCAAGATGGCTCACGCCT...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTTTTAGCAGTGCAGTaGAGTGGTGTTCTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCFLAVQ*SGVLLH
Trigger: ATGCAAAAGAACACCACTGCACTGCACTGCTAAAAA...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAATTGTTTCGGTCTCAATaGAGAACAGGAAAGCGGACA +
Preference number: 4 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQLFRSQ*RTGKRT
Trigger: TGTCCGCTTTCCTGTTCTCCATTGAGACCGAAACAA...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTCCTTGGCACAGCAGCTaGGTGTGTTGGTCTCATAGG +
Preference number: 4 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRPWHSS*VCWSHR
Trigger: CCTATGAGACCAACACACCCAGCTGCTGTGCCAAGG...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTTTTCTGCCAGCTCCTTaGCACAGCAGCTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRFLPAP*HSSWVC
Trigger: ACACACCCAGCTGCTGTGCCAAGGAGCTGGCAGAAA...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCCTCCATAATTCTGTaGCCTGGGAACATTGGCACT +
Preference number: 4 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEASIIL*PGNIGT
Trigger: AGTGCCAATGTTCCCAGGCCACAGAATTATGGAGGC...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGCAGAACCAAGGGCAGTaGCCTCTGAGTGGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEQNQGQ*PLSGLY
Trigger: ATACAAACCACTCAGAGGCCACTGCCCTTGGTTCTG...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATCAGGCGTCAGATTGGTaGAGCAAGGAAAATGAGTGG +
Preference number: 4 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDQASDW*SKENEW
Trigger: CCACTCATTTTCCTTGCTCCACCAATCTGACGCCTG...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAACAATTTAAGTTTCTCTaGGGCTCACCTCACATGAGG +
Preference number: 4 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQQFKFL*GSPHMR
Trigger: CCTCATGTGAGGTGAGCCCCAGAGAAACTTAAATTG...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp AGGGGCTGTCTAGTCCCAGGCCACCTTCTAAGAGTCACTCTAATGAGACCGATTGGCGAGCCGAGTAAGTaGCTTCTCCCCGAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: RGCLVPGHLLRVTLMRPIGEPSK*LLPESN
Trigger: ATTGCTTTCGGGGAGAAGCCACTTACTCGGCTCGCC...AATCGGTCTCATTAGAGTGACTCTTAGAAGGTGGCCTGGGACTAGACAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATTGGGGTCCCAGGGAGTaGCTCCAATCTCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENWGPRE*LQSPCP
Trigger: AGGACATGGAGATTGGAGTCACTCCCTGGGACCCCA...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATACCGGGCCTAAGCTCTaGAGCCTTCCCTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENTGPKL*SLPFAL
Trigger: CAGAGCAAAGGGAAGGCTTCAGAGCTTAGGCCCGGT...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGTTTCAGAGTCATAAATaGAGGCAGGTGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEFQSHK*RQVWGG
Trigger: TCCTCCCCACACCTGCCTTCATTTATGACTCTGAAA...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATAGGTCTCCTGGACGTTaGCGTGGTGCACGTTGCACT +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENRSPGR*RGARCT
Trigger: AGTGCAACGTGCACCACGGCAACGTCCAGGAGACCT...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATATTCTGCTCAGCCTCTaGATCCAGCCCTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENILLSL*IQPCLS
Trigger: GCTGAGGCAGGGCTGGATGCAGAGGCTGAGCAGAAT...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGCATGGAGAGAACAGATaGCATCCGGTAACATTCACC +
Preference number: 4 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEHGENR*HPVTFT
Trigger: GGTGAATGTTACCGGATGGCATCTGTTCTCTCCATG...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTTCTGAGTGGTTTGTATaGAGGAGCAGTGTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTSEWFV*RSSVLK
Trigger: TTTCAAAACACTGCTCCTGCATACAAACCACTCAGA...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGAGCAGCTGGGTGTGTTaGTCTCATAGGTATCATGGA +
Preference number: 4 (lower is better)
Translates to: SSKVTAQARTSTSKQQQESSWVC*SHRYHG
Trigger: TCCATGATACCTATGAGACCAACACACCCAGCTGCT...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTATCACTTTGGGATTTTaGAGATACTCAAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTITLGF*RYSRLW
Trigger: CCACAGTCTTGAGTATCTCCAAAATCCCAAAGTGAT...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTGCAACTTTTGGTTTTTaGCAACTTCAGTACAAGCAA +
Preference number: 4 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCATFGF*QLQYKQ
Trigger: TTGCTTGTACTGAAGTTGCCAAAAACCAAAAGTTGC...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTACAACGGGCAACTTTTaGTTTTTGGCAACTTCAGTA +
Preference number: 4 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTTTGNF*FLATSV
Trigger: TACTGAAGTTGCCAAAAACCAAAAGTTGCCCGTTGT...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp AGGGGCTGTCTAGTCCCAGGCCACCTTCTAAGAGTCACTCTAATGAGACCGATTCGGACACGAAGCCACTaGGGTTTTCAACACAAGGAA +
Preference number: 4 (lower is better)
Translates to: RGCLVPGHLLRVTLMRPIRTRSH*GFQHKE
Trigger: TTCCTTGTGTTGAAAACCTCAGTGGCTTCGTGTCCG...AATCGGTCTCATTAGAGTGACTCTTAGAAGGTGGCCTGGGACTAGACAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATAAGGGCAGTGGCCTCTaGGTGGTTTGTATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENKGSGL*VVCMQE
Trigger: CTCCTGCATACAAACCACTCAGAGGCCACTGCCCTT...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTCCGCATGGAGATGACTaGGTTGTTGGAAAACATGAG +
Preference number: 4 (lower is better)
Translates to: ILNHGSALWGPSDVMAWAPHGDD*VVGKHE
Trigger: CTCATGTTTTCCAACAACGCAGTCATCTCCATGCGG...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATTGTTGTGGGGTCCTGTaGGCAGAGGTACCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENCCGVL*AEVPKP
Trigger: TGGCTTAGGTACCTCTGCCCACAGGACCCCACAACA...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGCCAATCTCCATGTCCTaGTTCATGGCATTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEPISMS*FMAFLE
Trigger: TTCTAGGAATGCCATGAACCAGGACATGGAGATTGG...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATCGCGGGCCTGTTTTaGAATCTTCTTGGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKIAGLF*NLLGVP
Trigger: TGGGACCCCAAGAAGATTCCAAAACAGGCCCGCGAT...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAGAGCCCAGGATGGCCTaGACCAAGAGGAGTATAATC +
Preference number: 4 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKEPRMA*TKRSII
Trigger: GATTATACTCCTCTTGGTCCAGGCCATCCTGGGCTC...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGTTCTGGTTGATCTCATaGGAGATGATCAGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEFWLIS*EMIRGD
Trigger: GTCTCCTCTGATCATCTCCCATGAGATCAACCAGAA...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATGGCAGGTCATGCCTGTaGCTTCCACCATCCCTTCTA +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENGRSCL*LPPSLL
Trigger: TAGAAGGGATGGTGGAAGCCACAGGCATGACCTGCC...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTTCTAGCGAGAGCAGCTaGAACAATCTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ILNHGSALWGPSDVMAWASSESS*NNLSLS
Trigger: AGAGAGAGAGAGATTGTTCCAGCTGCTCTCGCTAGA...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGAAACTCATCCTGGCCTaGCCCTTAGCCAGCACCTAC +
Preference number: 4 (lower is better)
Translates to: ASTVTLVRASRQCFENQVKLILA*PLASTY
Trigger: GTAGGTGCTGGCTAAGGGCCAGGCCAGGATGAGTTT...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTTCCAATAGGCTACACTaGACACACAGAACACAGCAG +
Preference number: 4 (lower is better)
Translates to: ILNHGSALWGPSDVMAWASNRLH*THRTQQ
Trigger: CTGCTGTGTTCTGTGTGTCCAGTGTAGCCTATTGGA...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCACGGCTCAGCTCTCTaGGGTCCATCAGATGTGATG +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENHGSAL*GPSDVM
Trigger: CATCACATCTGATGGACCCCAGAGAGCTGAGCCGTG...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp AGGGGCTGTCTAGTCCCAGGCCACCTTCTAAGAGTCACTCTAATGAGACCGATTTCTATTCTGAGTTCCTaGAGGCTTCTCCCTACAGGG +
Preference number: 4 (lower is better)
Translates to: RGCLVPGHLLRVTLMRPISILSS*RLLPTG
Trigger: CCCTGTAGGGAGAAGCCTCCAGGAACTCAGAATAGA...AATCGGTCTCATTAGAGTGACTCTTAGAAGGTGGCCTGGGACTAGACAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATTGTTTGGGAGGCACTTaGCACCAAGGCCATGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENCLGGT*HQGHAS
Trigger: AGAGGCATGGCCTTGGTGCCAAGTGCCTCCCAAACA...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCACCTCCCAGGTTCATaGCATTCTTCTGCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENHLPGS*HSSASA
Trigger: AGCTGAGGCAGAAGAATGGCATGAACCTGGGAGGTG...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTCAGAAAGGGCTCTTCTaGTTGATCTCATGGGAGATG +
Preference number: 4 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRQKGLF*LISWEM
Trigger: CATCTCCCATGAGATCAACCAGAAGAGCCCTTTCTG...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGATTTTTAAATGCTCCTaGCTCTCCTTTCTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEIFKCS*LSFLFA
Trigger: GGCAAAGAGAAAGGAGAGCCAGGAGCATTTAAAAAT...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp AGGGGCTGTCTAGTCCCAGGCCACCTTCTAAGAGTCACTCTAATGAGACCGATTCATAATTCTGTGGCCTaGGAACATTGGCACTCTATC +
Preference number: 4 (lower is better)
Translates to: RGCLVPGHLLRVTLMRPIHNSVA*EHWHSI
Trigger: GATAGAGTGCCAATGTTCCCAGGCCACAGAATTATG...AATCGGTCTCATTAGAGTGACTCTTAGAAGGTGGCCTGGGACTAGACAGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAATGTCAGGCGTCAGATTaGTGGAGCAAGGAAAATGAG +
Preference number: 4 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKCQASD*WSKENE
Trigger: CTCATTTTCCTTGCTCCACCAATCTGACGCCTGACA...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAGTGGAGCAAGGAAAATaGGTGGGAACGAGTTCTATT +
Preference number: 4 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKVEQGK*VGTSSI
Trigger: AATAGAACTCGTTCCCACTCATTTTCCTTGCTCCAC...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGTTTTCAAACTTTCATTaGATCAGTTGGTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEFSNFH*ISWSPG
Trigger: TCCTGGTGACCAACTGATGCAATGAAAGTTTGAAAA...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 72 bp GACACACAGAACACAGCAGAGGAAAAACACACACATTaGGCAGATAACAGCAGAGAACACCAAGGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: DTQNTAEEKHTH*ADNSREHQGLY
Trigger: GTACAGCCCTTGGTGTTCTCTGCTGTTATCTGCCAAATGTGTGTGTTTTTCCTCTGCTGTGTTCTGTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCCATCCCTTCTAGAATaGCCACAACTTCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: LSASTVTLVRASRQCFENPSLLE*PQLQTL
Trigger: AAGAGTTTGAAGTTGTGGTCATTCTAGAAGGGATGG...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTTGTCTAATCTCTTTTTaGAGCTCATTAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRCLISF*SSLVLW
Trigger: CCAGAGAACTAATGAGCTGCAAAAAGAGATTAGACA...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp AGGGGCTGTCTAGTCCCAGGCCACCTTCTAAGAGTCACTCTAATGAGACCGATTAGCTCATTAGTTCTCTaGGAATCAGAAAAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: RGCLVPGHLLRVTLMRPISSLVL*ESEKGC
Trigger: ACAACCTTTTTCTGATTCCCAGAGAACTAATGAGCT...AATCGGTCTCATTAGAGTGACTCTTAGAAGGTGGCCTGGGACTAGACAGCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 72 bp TTGCAGCTCATTAGTTCTCTGGGAATCAGAAAAAGGTaGTTTCCCAATTATCCCGCCACAGGGGCACATCAT +
Preference number: 4 (lower is better)
Translates to: LQLISSLGIRKR*FPNYPATGAHH
Trigger: ATGATGTGCCCCTGTGGCGGGATAATTGGGAAACAACCTTTTTCTGATTCCCAGAGAACTAATGAGCTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR TCA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAAAGGAATTGCCTATGTaGTATGGATGGATCTTAACT +
Preference number: 4 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKKELPM*YGWILT
Trigger: AGTTAAGATCCATCCATATCACATAGGCAATTCCTT...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR GCA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAGCAGTGGTGTTCTTTTaGATACGAAGATTGATGAAT +
Preference number: 4 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKAVVFF*IRRLMN
Trigger: ATTCATCAATCTTCGTATGCAAAAGAACACCACTGC...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CCA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGTTCTTGCTTTTAAACTaGCATGATAGAAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ASTVTLVRASRQCFENQVFLLLN*HDRRQR
Trigger: CCTCTGCCTTCTATCATGCCAGTTTAAAAGCAAGAA...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 72 bp AGGGCTGTACGCTCTGTACCTCTCAGTAATGGGTCGTaGGTATCTGATTTAAAAGGAATTGCCTATGTGATA +
Preference number: 4 (lower is better)
Translates to: RAVRSVPLSNGS*VSDLKGIAYVI
Trigger: TATCACATAGGCAATTCCTTTTAAATCAGATACCAACGACCCATTACTGAGAGGTACAGAGCGTACAGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 72 bp CAGTGCAGTGCAGTGGTGTTCTTTTGCATACGAAGATaGATGAATCCTACACAGGGAGAAAAAGATTTGACA +
Preference number: 4 (lower is better)
Translates to: QCSAVVFFCIRR*MNPTQGEKDLT
Trigger: TGTCAAATCTTTTTCTCCCTGTGTAGGATTCATCAATCTTCGTATGCAAAAGAACACCACTGCACTGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 72 bp TGTGAATTTTTAGCAGTGCAGTGCAGTGGTGTTCTTTaGCATACGAAGATTGATGAATCCTACACAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CEFLAVQCSGVL*HTKIDESYTGR
Trigger: TCTCCCTGTGTAGGATTCATCAATCTTCGTATGCAAAAGAACACCACTGCACTGCACTGCTAAAAATTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529694.6
3UTR CAA 72 bp TCAGGGCACAGTCTTAAAAATGACAACGGGCAACTTTaGGTTTTTGGCAACTTCAGTACAAGCAATTTAAGT +
Preference number: 4 (lower is better)
Translates to: SGHSLKNDNGQL*VFGNFSTSNLS
Trigger: ACTTAAATTGCTTGTACTGAAGTTGCCAAAAACCAAAAGTTGCCCGTTGTCATTTTTAAGACTGTGCCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTTCCACGATGTGGGAGTaGCGGAGGTCGCCCACCCGG +
Preference number: 5 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTSTMWE*RRSPTR
Trigger: CCGGGTGGGCGACCTCCGCAACTCCCACATCGTGGA...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS CCA 90 bp CACGGAGGAGCTGTAGCTGGAACCTCTCCCTGTTGTGGGGTCCTGTaGGCAGAGGTACCTAAGCCATCCTGTCCCTTCACTCGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: HGGAVAGTSPCCGVL*AEVPKPSCPFTRGP
Trigger: GGGGCCGCGAGTGAAGGGACAGGATGGCTTAGGTACCTCTGCCCACAGGACCCCACAACAGGGAGAGGTTCCAGCTACAGCTCCTCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338350.4
ENST00000529694.6
CDS-3UTR CAA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGCGCTGGCGTGGCTTCTaGCCCTCGGCCAGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: SSKVTAQARTSTSKQQQERWRGF*PSASRR
Trigger: GCGCCTGCTGGCCGAGGGCAAGAAGCCACGCCAGCG...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTGGTGCAAGGCCAGCTTaGCCTTCGCCTTCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCGARPA*PSPSLP
Trigger: AGGGAGGGAAGGCGAAGGCAAAGCTGGCCTTGCACC...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGGCCCCGGCTGTTTGTTaGGGAGGCACTTGGCACCAA +
Preference number: 5 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGAPAVC*GGTWHQ
Trigger: TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGC...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS CCA 90 bp GTGGCTTCTTGCCCTCGGCCAGCAGGCGCGTACGGTCTGTGGCAATaGGGACATAATCGCGGGCCTGTTTTGGAATCTTCTTGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: VASCPRPAGAYGLWQ*GHNRGPVLESSWGP
Trigger: GGGACCCCAAGAAGATTCCAAAACAGGCCCGCGATTATGTCCCCATTGCCACAGACCGTACGCGCCTGCTGGCCGAGGGCAAGAAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338350.4
ENST00000529694.6
ENST00000533599.1
CDS CCA 90 bp GCTGGCGTGGCTTCTTGCCCTCGGCCAGCAGGCGCGTACGGTCTGTaGCAATGGGGACATAATCGCGGGCCTGTTTTGGAATCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: AGVASCPRPAGAYGL*QWGHNRGPVLESSW
Trigger: CCAAGAAGATTCCAAAACAGGCCCGCGATTATGTCCCCATTGCCACAGACCGTACGCGCCTGCTGGCCGAGGGCAAGAAGCCACGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338350.4
ENST00000529694.6
ENST00000533599.1
CDS-3UTR CAA 90 bp CCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGATTGCCGTGGTGCACGTaGCACTTGCCACTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PTSQDPAQEQSLWSPSLGLPWCT*HLPLFS
Trigger: GGAGAAGAGTGGCAAGTGCAACGTGCACCACGGCAA...TCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGACAAGGAATCCACTCTaGGTCGCCAACATGGTCCAG +
Preference number: 5 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGTRNPL*VANMVQ
Trigger: CTGGACCATGTTGGCGACCAAGAGTGGATTCCTTGT...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTGCCATAGCTGGGATGTaGTTGAGATCGGAGCTTCCG +
Preference number: 5 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCAIAGM*LRSELP
Trigger: CGGAAGCTCCGATCTCAACAACATCCCAGCTATGGC...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GAAGGCAGAGGAGGCACACTGGGGCGGTGTTGCACTAATCCCAGCATGCCCGGGCCAGAGCTTCTAGACTaGGCTGAGAGATGTGACCTG +
Preference number: 5 (lower is better)
Translates to: EGRGGTLGRCCTNPSMPGPELLD*AERCDL
Trigger: CAGGTCACATCTCTCAGCCAAGTCTAGAAGCTCTGG...CCCGGGCATGCTGGGATTAGTGCAACACCGCCCCAGTGTGCCTCCTCTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp CCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGATTGTTTGGGAGGCACTaGGCACCAAGGCCATGCCTC +
Preference number: 5 (lower is better)
Translates to: PTSQDPAQEQSLWSPSLGLFGRH*APRPCL
Trigger: GAGGCATGGCCTTGGTGCCAAGTGCCTCCCAAACAA...TCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTTGCTGGGGTTCCCCCTaGGTGGGAGGTGCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRCWGSP*VGGAGH
Trigger: GTGCCCTGCACCTCCCACCAAGGGGGAACCCCAGCA...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGCACGGCCCCGGCTGTTaGTTTGGGAGGCACTTGGCA +
Preference number: 5 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEHGPGC*FGRHLA
Trigger: TGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTG...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGTGGAACCTCTCCCTGTaGTGGGGTCCTGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEWNLSL*WGPVGR
Trigger: TCTGCCCACAGGACCCCACAACAGGGAGAGGTTCCA...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTTGTGGCCTGGGAACATaGGCACTCTATCTCCATGTC +
Preference number: 5 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTCGLGT*ALYLHV
Trigger: GACATGGAGATAGAGTGCCAATGTTCCCAGGCCACA...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp CCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGAGGGTGTGGAATGGTTTaGCTGTTAGTAACCCTGGGG +
Preference number: 5 (lower is better)
Translates to: PTSQDPAQEQSLWSPSLGGCGMV*LLVTLG
Trigger: CCCCAGGGTTACTAACAGCAAAACCATTCCACACCC...TCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGTTCACTCGCGGCCCCTaGGGTCACTCCCTTTCTCTA +
Preference number: 5 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEFTRGP*GHSLSL
Trigger: TAGAGAAAGGGAGTGACCCAAGGGGCCGCGAGTGAA...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTGAGATGACTGCGTTGTaGGAAAACATGAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTEMTAL*ENMRVS
Trigger: GGAGACCCTCATGTTTTCCAACAACGCAGTCATCTC...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAACCCCGCTTGCCCTCTaGTTTCCAGCCTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKTPLAL*FPAWEG
Trigger: CCCCTCCCAGGCTGGAAACAAGAGGGCAAGCGGGGT...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGTGGAGAGTGGCTCCCTaGGTCAGGTGGGGGATGTTT +
Preference number: 5 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEWRVAP*VRWGMF
Trigger: AAACATCCCCCACCTGACCAAGGGAGCCACTCTCCA...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp CCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGACTTCTCGGCAGTGTTTaGAGAATCAAGTGCCTGACC +
Preference number: 5 (lower is better)
Translates to: PTSQDPAQEQSLWSPSLGLLGSV*RIKCLT
Trigger: GGTCAGGCACTTGATTCTCAAAACACTGCCGAGAAG...TCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS CCA 90 bp CACTCGCGGCCCCTTGGGTCACTCCCTTTCTCTAGCGAGAGCAGCTaGAACAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: HSRPLGSLPFSSESS*NNLSLSLSLSLSLC
Trigger: ACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGTTCCAGCTGCTCTCGCTAGAGAAAGGGAGTGACCCAAGGGGCCGCGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGTTGGGCTGGCTGATCTaGACAAACATGCACCCCACC +
Preference number: 5 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLELGWLI*TNMHPT
Trigger: GGTGGGGTGCATGTTTGTCAAGATCAGCCAGCCCAA...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATGTCTCCGCTCTCTTCTaGGGCTGGCTGATCTTGACA +
Preference number: 5 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDVSALF*GWLILT
Trigger: TGTCAAGATCAGCCAGCCCAAGAAGAGAGCGGAGAC...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTATGGAGATGACTGCGTaGTTGGAAAACATGAGGGTC +
Preference number: 5 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTMEMTA*LENMRV
Trigger: GACCCTCATGTTTTCCAACAACGCAGTCATCTCCAT...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAATTCCTCCCCACAGCCTaGATGGCTCCTGAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKFLPTA*MAPEPP
Trigger: TGGGGGCTCAGGAGCCATCAAGGCTGTGGGGAGGAA...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCAGCACTCTGAGATTCTaGGGCCAAAAAGCACTCGAA +
Preference number: 5 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSSTLRF*GQKALE
Trigger: TTCGAGTGCTTTTTGGCCCAAGAATCTCAGAGTGCT...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp AGGGGCTGTCTAGTCCCAGGCCACCTTCTAAGAGTCACTCTAATGAGACCGATTCTCTCCTTATCTCTGTaGCCTGGGCCCAGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: RGCLVPGHLLRVTLMRPILSLSL*PGPSVV
Trigger: CACCACGCTGGGCCCAGGCAACAGAGATAAGGAGAG...AATCGGTCTCATTAGAGTGACTCTTAGAAGGTGGCCTGGGACTAGACAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTGGAATCAGAAAAAGGTaGTTTCCCAATTATCCCGCC +
Preference number: 5 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCGIRKR*FPNYPA
Trigger: GGCGGGATAATTGGGAAACAACCTTTTTCTGATTCC...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTCAGTTTAAGGAGACGTaGTTAGCAAAAACCAAGGCG +
Preference number: 5 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCQFKET*LAKTKA
Trigger: CGCCTTGGTTTTTGCTAACAACGTCTCCTTAAACTG...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS CCA 90 bp GGAATCTTCTTGGGGTCCCAGGGAGTGACTCCAATCTCCATGTCCTaGTTCATGGCATTCCTAGAATCGCCAGCCATAGCTGGGATGCAC +
Preference number: 5 (lower is better)
Translates to: GIFLGSQGVTPISMS*FMAFLESPAIAGMH
Trigger: GTGCATCCCAGCTATGGCTGGCGATTCTAGGAATGCCATGAACCAGGACATGGAGATTGGAGTCACTCCCTGGGACCCCAAGAAGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338350.4
CDS-3UTR CAA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTGTGAAGACGAGCAAGTaGAAGCGCCACTTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: ILNHGSALWGPSDVMAWAVKTSK*KRHLRS
Trigger: GGACCTCAAGTGGCGCTTCAACTTGCTCGTCTTCAC...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGGTGTCAAAGCCCACGTaGATGTCTGTCTGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLEVSKPT*MSVWFR
Trigger: CCTGAACCAGACAGACATCAACGTGGGCTTTGACAC...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp ACCCTGCCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCATTCTCAAAGGCCAGTaGAGAGCTGTGAATACTGTG +
Preference number: 5 (lower is better)
Translates to: TLPTSQDPAQEQSLWSPSILKGQ*RAVNTV
Trigger: CACAGTATTCACAGCTCTCAACTGGCCTTTGAGAAT...GGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTCATTCCCTCCAAGGCTaGGGACCACAACTGCACACC +
Preference number: 5 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRHSLQG*GPQLHT
Trigger: GGTGTGCAGTTGTGGTCCCAAGCCTTGGAGGGAATG...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp CCCACCTCTCAAGATCCAGCCCAGGAGCAAAGCTTATGGAGCCCCTCCCTGGGAGAAGGGGGAGTCTTCTaGCTTTTAAACTGGCATGAT +
Preference number: 5 (lower is better)
Translates to: PTSQDPAQEQSLWSPSLGEGGVF*LLNWHD
Trigger: ATCATGCCAGTTTAAAAGCAAGAAGACTCCCCCTTC...TCCCAGGGAGGGGCTCCATAAGCTTTGCTCCTGGGCTGGATCTTGAGAGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GCGTGGTGCCGTGGATGTGAGAGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTCTTTTCAAACTTTCATaGCATCAGTTGGTCACCAGG +
Preference number: 5 (lower is better)
Translates to: AWCRGCESLGRTTAPAVCLFKLS*HQLVTR
Trigger: CCTGGTGACCAACTGATGCAATGAAAGTTTGAAAAG...ACAAACAGCCGGGGCCGTGGTCCTGCCTAAACTCTCACATCCACGGCACCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS CCA 90 bp GGAATCTTCTTGGGGTCCCAGGGAGTGACTCCAATCTCCATGTCCTaGTTCATGGCATTCCTAGAATCGCCAGCCATAGCTGGGATGTTG +
Preference number: 5 (lower is better)
Translates to: GIFLGSQGVTPISMS*FMAFLESPAIAGML
Trigger: CAACATCCCAGCTATGGCTGGCGATTCTAGGAATGCCATGAACCAGGACATGGAGATTGGAGTCACTCCCTGGGACCCCAAGAAGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS CCA 90 bp GGAATCTTCTTGGGGTCCCAGGGAGTGACTCCAATCTCCATGTCCTaGTTCATGGCATTCCTAGAATCGCCAGCCATAGCTGGGATGCTT +
Preference number: 5 (lower is better)
Translates to: GIFLGSQGVTPISMS*FMAFLESPAIAGML
Trigger: AAGCATCCCAGCTATGGCTGGCGATTCTAGGAATGCCATGAACCAGGACATGGAGATTGGAGTCACTCCCTGGGACCCCAAGAAGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533599.1
CDS-3UTR CAA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATTTCTGCCAGCTCCTaGGCACAGCAGCTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKISASS*AQQLGV
Trigger: CACACCCAGCTGCTGTGCCAAGGAGCTGGCAGAAAT...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATTCTGAAGCCTTCCCTTaGCTCTGCCTCAACTTCCTA +
Preference number: 5 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDSEAFP*LCLNFL
Trigger: TAGGAAGTTGAGGCAGAGCAAAGGGAAGGCTTCAGA...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTTTTGAAAGTGACCCCTaGAAACTCTGTCCATCATCA +
Preference number: 5 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTFESDP*KLCPSS
Trigger: TGATGATGGACAGAGTTTCAAGGGGTCACTTTCAAA...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp ATCTTAAACCACGGCTCAGCTCTCTGGGGTCCATCAGATGTGATGGCATGGGCTAAGCATGAGAATCGCTaGAACCTGGGAGGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: ILNHGSALWGPSDVMAWAKHENR*NLGGGR
Trigger: TCTGCCACCTCCCAGGTTCAAGCGATTCTCATGCTT...AGCCCATGCCATCACATCTGATGGACCCCAGAGAGCTGAGCCGTGGTTTAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GAACCAAGGGCAGTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAAATCGCGGGCCTGTTTaGGAATCTTCTTGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: EPRAVASEWFVCRSSVLKNRGPV*ESSWGP
Trigger: GGGACCCCAAGAAGATTCCAAAACAGGCCCGCGATT...TTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCACTGCCCTTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp CAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGCGATAAAGGGCTCTTCTGGTaGATCTCATGGGAGATGATC +
Preference number: 5 (lower is better)
Translates to: QGNCSSQDLNLKAAAGGDKGLFW*ISWEMI
Trigger: GATCATCTCCCATGAGATCAACCAGAAGAGCCCTTT...ATCGCCTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GTGGAAGGAATGAGGGACAAGGTGATGGTTCTCTCTAGGTGTCAGCCCCTGGAGTCCCAGACTAGAGGTTaGAGCTCTCATCAGGTAAGT +
Preference number: 5 (lower is better)
Translates to: VEGMRDKVMVLSRCQPLESQTRG*SSHQVS
Trigger: ACTTACCTGATGAGAGCTCAAACCTCTAGTCTGGGA...CTCCAGGGGCTGACACCTAGAGAGAACCATCACCTTGTCCCTCATTCCTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GAGAGATGTGACCTGGTCCTGGCTCACGGAGGGCCCTGGTGGAGTGAGAGAACTTTTTGCATACGAAGATaGATGAATCCTACACAGGGA +
Preference number: 5 (lower is better)
Translates to: ERCDLVLAHGGPWWSERTFCIRR*MNPTQG
Trigger: TCCCTGTGTAGGATTCATCAATCTTCGTATGCAAAA...AGTTCTCTCACTCCACCAGGGCCCTCCGTGAGCCAGGACCAGGTCACATCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp AGGGGCTGTCTAGTCCCAGGCCACCTTCTAAGAGTCACTCTAATGAGACCGATTATAGCTGGGATGTTGTaGAGATCGGAGCTTCCGAGT +
Preference number: 5 (lower is better)
Translates to: RGCLVPGHLLRVTLMRPIIAGML*RSELPS
Trigger: ACTCGGAAGCTCCGATCTCAACAACATCCCAGCTAT...AATCGGTCTCATTAGAGTGACTCTTAGAAGGTGGCCTGGGACTAGACAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAACTGTCTAATCTCTTTTaGCAGCTCATTAGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQLSNLF*QLISSL
Trigger: CAGAGAACTAATGAGCTGCAAAAAGAGATTAGACAG...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp AGTTTAGGCAGGACCACGGCCCCGGCTGTTTGTTTGGGAGGCACTTGGCACCAATGCAGTGGTGTTCTTTaGCATACGAAGATTGATGAA +
Preference number: 5 (lower is better)
Translates to: SLGRTTAPAVCLGGTWHQCSGVL*HTKIDE
Trigger: TTCATCAATCTTCGTATGCAAAAGAACACCACTGCA...TTGGTGCCAAGTGCCTCCCAAACAAACAGCCGGGGCCGTGGTCCTGCCTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTCTTTCATTGCATCAGTaGGTCACCAGGAAGGGGATT +
Preference number: 5 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRLSLHQ*VTRKGI
Trigger: AATCCCCTTCCTGGTGACCAACTGATGCAATGAAAG...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp CTCTCAGCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATTGCAGGAGCAGTGTTTaGAAAATGGCTGGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: LSASTVTLVRASRQCFENCRSSV*KMAGRG
Trigger: ACCACGCCCAGCCATTTTCAAAACACTGCTCCTGCA...ATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGCTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGGGCAACTTTTGGTTTTaGGCAACTTCAGTACAAGCA +
Preference number: 5 (lower is better)
Translates to: SSKVTAQARTSTSKQQQEGNFWF*ATSVQA
Trigger: TGCTTGTACTGAAGTTGCCAAAAACCAAAAGTTGCC...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp TCCAGCAAGGTAACTGCTCAAGCCAGGACCTCAACCTCAAAGCAGCAGCAGGAGCTCAGTAATGGGTCGTaGGTATCTGATTTAAAAGGA +
Preference number: 5 (lower is better)
Translates to: SSKVTAQARTSTSKQQQELSNGS*VSDLKG
Trigger: TCCTTTTAAATCAGATACCAACGACCCATTACTGAG...CTCCTGCTGCTGCTTTGAGGTTGAGGTCCTGGCTTGAGCAGTTACCTTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS-3UTR CAA 90 bp GTGGCCTCTGAGTGGTTTGTATGCAGGAGCAGTGTTTTGAAAATGGCTGGGCGTGACAACGGGCAACTTTaGGTTTTTGGCAACTTCAGT +
Preference number: 5 (lower is better)
Translates to: VASEWFVCRSSVLKMAGRDNGQL*VFGNFS
Trigger: ACTGAAGTTGCCAAAAACCAAAAGTTGCCCGTTGTC...ACGCCCAGCCATTTTCAAAACACTGCTCCTGCATACAAACCACTCAGAGGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS TCA 90 bp TGGTTCATGGCATTCCTAGAATCGCCAGCCATAGCTGGGATGCTTTaGGTTAAAAAGACACCATCAGTGAAGTGGGCTGTTCTGATTCAC +
Preference number: 5 (lower is better)
Translates to: WFMAFLESPAIAGML*VKKTPSVKWAVLIH
Trigger: GTGAATCAGAACAGCCCACTTCACTGATGGTGTCTTTTTAACTCAAAGCATCCCAGCTATGGCTGGCGATTCTAGGAATGCCATGAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533599.1
CDS-3UTR CAA 90 bp GCCTCAACTGTCACGTTGGTAAGAGCTTCTCGGCAGTGTTTTGAGAATCAAGTGTATCACTTTGGGATTTaGGAGATACTCAAGACTGTG +
Preference number: 5 (lower is better)
Translates to: ASTVTLVRASRQCFENQVYHFGI*EILKTV
Trigger: CACAGTCTTGAGTATCTCCAAAATCCCAAAGTGATA...CACTTGATTCTCAAAACACTGCCGAGAAGCTCTTACCAACGTGACAGTTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS GCA 72 bp TGCCACTCTTCTCCATGTAGCGCTGGCGTGGCTTCTTaGCCTCGGCCAGCAGGCGCGTACGGTCTGTGGCAA +
Preference number: 6 (lower is better)
Translates to: CHSSPCSAGVAS*PRPAGAYGLWQ
Trigger: TTGCCACAGACCGTACGCGCCTGCTGGCCGAGGGCAAGAAGCCACGCCAGCGCTACATGGAGAAGAGTGGCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338350.4
ENST00000529694.6
ENST00000533599.1
CDS CCA 72 bp GCTTCTTGCCCTCGGCCAGCAGGCGCGTACGGTCTGTaGCAATGGGGACATAATCGCGGGCCTGTTTTGGAA +
Preference number: 6 (lower is better)
Translates to: ASCPRPAGAYGL*QWGHNRGPVLE
Trigger: TTCCAAAACAGGCCCGCGATTATGTCCCCATTGCCACAGACCGTACGCGCCTGCTGGCCGAGGGCAAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338350.4
ENST00000529694.6
ENST00000533599.1
CDS TCA 72 bp GCCATAGCTGGGATGCACACAACGGCCAGCAGACACTaGTGCTCCGGGGCTCATGCTAAGGCTGATGACCTG +
Preference number: 6 (lower is better)
Translates to: AIAGMHTTASRH*CSGAHAKADDL
Trigger: CAGGTCATCAGCCTTAGCATGAGCCCCGGAGCATCAGTGTCTGCTGGCCGTTGTGTGCATCCCAGCTATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338350.4
CDS CCA 72 bp TGCCCTCGGCCAGCAGGCGCGTACGGTCTGTGGCAATaGGGACATAATCGCGGGCCTGTTTTGGAATCTTCT +
Preference number: 6 (lower is better)
Translates to: CPRPAGAYGLWQ*GHNRGPVLESS
Trigger: AGAAGATTCCAAAACAGGCCCGCGATTATGTCCCCATTGCCACAGACCGTACGCGCCTGCTGGCCGAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338350.4
ENST00000529694.6
ENST00000533599.1
CDS CAA 72 bp GTACCTAAGCCATCCTGTCCCTTCACTCGCGGCCCCTaGGGTCACTCCCTTTCTCTAGCGAGAGCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: VPKPSCPFTRGP*GHSLSLARAAG
Trigger: TCCAGCTGCTCTCGCTAGAGAAAGGGAGTGACCCAAGGGGCCGCGAGTGAAGGGACAGGATGGCTTAGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338350.4
ENST00000529694.6
CDS CAA 90 bp TGGGCAGAGGTACCTAAGCCATCCTGTCCCTTCACTCGCGGCCCCTaGGGTCACTCCCTTTCTCTAGCGAGAGCAGCTGGAACAATCTCT +
Preference number: 6 (lower is better)
Translates to: WAEVPKPSCPFTRGP*GHSLSLARAAGTIS
Trigger: AGAGATTGTTCCAGCTGCTCTCGCTAGAGAAAGGGAGTGACCCAAGGGGCCGCGAGTGAAGGGACAGGATGGCTTAGGTACCTCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338350.4
ENST00000529694.6
CDS CCA 72 bp GCTGTAGCTGGAACCTCTCCCTGTTGTGGGGTCCTGTaGGCAGAGGTACCTAAGCCATCCTGTCCCTTCACT +
Preference number: 6 (lower is better)
Translates to: AVAGTSPCCGVL*AEVPKPSCPFT
Trigger: AGTGAAGGGACAGGATGGCTTAGGTACCTCTGCCCACAGGACCCCACAACAGGGAGAGGTTCCAGCTACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338350.4
ENST00000529694.6
CDS TCA 72 bp GGGCCTGTTTTGGAATCTTCTTGGGGTCCCAGGGAGTaGCTCCAATCTCCATGTCCTGGTTCATGGCATTCC +
Preference number: 6 (lower is better)
Translates to: GPVLESSWGPRE*LQSPCPGSWHS
Trigger: GGAATGCCATGAACCAGGACATGGAGATTGGAGTCACTCCCTGGGACCCCAAGAAGATTCCAAAACAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338350.4
ENST00000529694.6
ENST00000533599.1
CDS CCA 72 bp TTGGGGTCCCAGGGAGTGACTCCAATCTCCATGTCCTaGTTCATGGCATTCCTAGAATCGCCAGCCATAGCT +
Preference number: 6 (lower is better)
Translates to: LGSQGVTPISMS*FMAFLESPAIA
Trigger: AGCTATGGCTGGCGATTCTAGGAATGCCATGAACCAGGACATGGAGATTGGAGTCACTCCCTGGGACCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338350.4
ENST00000529694.6
ENST00000533599.1
CDS CCA 72 bp CCCCTTGGGTCACTCCCTTTCTCTAGCGAGAGCAGCTaGAACAATCTCTCTCTCTCTCTCTCTCTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: PLGSLPFSSESS*NNLSLSLSLSL
Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGATTGTTCCAGCTGCTCTCGCTAGAGAAAGGGAGTGACCCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529694.6
CDS TCA 72 bp GCATTCCTAGAATCGCCAGCCATAGCTGGGATGCTTTaGGTTAAAAAGACACCATCAGTGAAGTGGGCTGTT +
Preference number: 6 (lower is better)
Translates to: AFLESPAIAGML*VKKTPSVKWAV
Trigger: AACAGCCCACTTCACTGATGGTGTCTTTTTAACTCAAAGCATCCCAGCTATGGCTGGCGATTCTAGGAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533599.1